@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 2.20.7 → 2.21.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (16) hide show
  1. package/.turbo/turbo-build.log +1 -1
  2. package/CHANGELOG.md +14 -0
  3. package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
  4. package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
  5. package/dist/tengo/tpl/list-presets.plj.gz +0 -0
  6. package/dist/tengo/tpl/main.plj.gz +0 -0
  7. package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
  8. package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
  9. package/dist/tengo/tpl/prerun.plj.gz +0 -0
  10. package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
  11. package/dist/tengo/tpl/process.plj.gz +0 -0
  12. package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
  13. package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
  14. package/package.json +5 -5
  15. package/src/calculate-preset-info.tpl.tengo +2 -2
  16. package/src/list-presets.tpl.tengo +1 -3
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
1
1
   WARN  Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
2
2
 
3
- > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.20.7 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
3
+ > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.21.0 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
4
4
  > rm -rf dist && pl-tengo check && pl-tengo build
5
5
 
6
6
  info: Skipping unknown file type: test/columns.test.ts
package/CHANGELOG.md CHANGED
@@ -1,5 +1,19 @@
1
1
  # @platforma-open/milaboratories.mixcr-clonotyping.workflow
2
2
 
3
+ ## 2.21.0
4
+
5
+ ### Minor Changes
6
+
7
+ - c58e60e: SDK Upgrade
8
+
9
+ ## 2.20.8
10
+
11
+ ### Patch Changes
12
+
13
+ - 26b311c: - MiXCR upgrade
14
+ - fix for file lock safeguard error
15
+ - better memory management
16
+
3
17
  ## 2.20.7
4
18
 
5
19
  ### Patch Changes
package/dist/tengo/tpl/list-presets.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/main.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/mixcr-analyze.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/mixcr-export.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/prerun.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/process.plj.gz CHANGED
Binary file
package/package.json CHANGED
@@ -1,14 +1,14 @@
1
1
  {
2
2
  "name": "@platforma-open/milaboratories.mixcr-clonotyping-2.workflow",
3
- "version": "2.20.7",
3
+ "version": "2.21.0",
4
4
  "description": "Tengo-based template",
5
5
  "dependencies": {
6
- "@platforma-sdk/workflow-tengo": "^4.8.0",
7
- "@platforma-open/milaboratories.software-mixcr": "4.7.0-185-develop"
6
+ "@platforma-sdk/workflow-tengo": "^4.8.1",
7
+ "@platforma-open/milaboratories.software-mixcr": "4.7.0-190-develop"
8
8
  },
9
9
  "devDependencies": {
10
- "@platforma-sdk/tengo-builder": "^2.1.10",
11
- "@platforma-sdk/test": "^1.34.14",
10
+ "@platforma-sdk/tengo-builder": "^2.1.11",
11
+ "@platforma-sdk/test": "^1.37.6",
12
12
  "vitest": "~2.1.9",
13
13
  "typescript": "~5.5.4"
14
14
  },
package/src/calculate-preset-info.tpl.tengo CHANGED
@@ -25,7 +25,7 @@ self.body(func(inputs) {
25
25
 
26
26
  mixcrExportPresetCmdBuilder := exec.builder().
27
27
  inUiQueue().
28
- mem("1GiB").
28
+ mem("512MiB").
29
29
  software(mixcrSw).
30
30
  secret("MI_LICENSE", "MI_LICENSE").
31
31
  printErrStreamToStdout().
@@ -56,7 +56,7 @@ self.body(func(inputs) {
56
56
 
57
57
  mixcrForBackCmd := exec.builder().
58
58
  inUiQueue().
59
- mem("1GiB").
59
+ mem("512MiB").
60
60
  software(mixcrSw).
61
61
  secret("MI_LICENSE", "MI_LICENSE").
62
62
  printErrStreamToStdout().
package/src/list-presets.tpl.tengo CHANGED
@@ -12,11 +12,9 @@ self.defineOutputs("presets")
12
12
  mixcrSw := assets.importSoftware("@platforma-open/milaboratories.software-mixcr:memory-from-limits")
13
13
 
14
14
  self.body(func(inputs) {
15
- // ll.print("__THE_LOG__ feats.computeLimits " + feats.computeLimits)
16
- ll.print("__THE_LOG__ asdhjkajsdjasdjk")
17
15
  listPresets := exec.builder().
18
16
  inUiQueue().
19
- mem("1GiB").
17
+ mem("512MiB").
20
18
  software(mixcrSw).
21
19
  secret("MI_LICENSE", "MI_LICENSE").
22
20
  arg("listPresetSpecificationsForUI").