@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 2.14.0 → 2.14.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +1 -1
- package/.turbo/turbo-test.log +25 -10
- package/CHANGELOG.md +6 -0
- package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
- package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
- package/dist/tengo/tpl/list-presets.plj.gz +0 -0
- package/dist/tengo/tpl/main.plj.gz +0 -0
- package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
- package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
- package/dist/tengo/tpl/prerun.plj.gz +0 -0
- package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
- package/dist/tengo/tpl/process.plj.gz +0 -0
- package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
- package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
- package/package.json +2 -2
package/.turbo/turbo-build.log
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WARN Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.14.
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> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.14.1 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
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> rm -rf dist && pl-tengo check && pl-tengo build
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info: Skipping unknown file type: test/columns.test.ts
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package/.turbo/turbo-test.log
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WARN Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.14.
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> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.14.1 test /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
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> vitest
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[1m[7m[36m RUN [39m[27m[22m [36mv2.1.8 [39m[90m/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow[39m
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[90mstdout[2m | src/test/columns.test.ts[2m > [22m[2mchecking preset for 'milab-human-dna-xcr-7genes-multiplex'
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[22m[39m{
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type: [32m'ok'[39m,
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value: [90mundefined[39m,
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stable: [33mfalse[39m,
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uTag: [32m'fc1997c6-5b87-4c86-8aa6-0ea9d2014b38'[39m,
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unstableMarker: [32m'field_not_resolved:exportSpecs'[39m
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}
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[90mstdout[2m | src/test/columns.test.ts[2m > [22m[2mchecking preset for 'milab-human-dna-xcr-7genes-multiplex'
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[22m[39mTEST FAILED SO ALTERNATIVE ROOT IS PRESETVED IN PL: test_1745591248072_67adc363-cf48-41ba-82a1-fe7e00142ad8 (NG:0x82)
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[90mstdout[2m | src/test/columns.test.ts[2m > [22m[2mchecking preset for 'milab-human-dna-xcr-7genes-multiplex'
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[22m[39mTEST FAILED SO ALTERNATIVE ROOT IS PRESETVED IN PL: test_1745591269056_11ea8a8b-adb0-49ca-b74e-a9b287bc1ae3 (NG:0x138)
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[32m✓[39m src/test/columns.test.ts [2m([22m[2m6 tests[22m[2m)[22m[33m 67551[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for 'milab-human-dna-xcr-7genes-multiplex' [33m27568[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for '10x-sc-xcr-vdj' [33m8418[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for 'cellecta-human-rna-xcr-umi-drivermap-…' [33m8182[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for 'takara-human-rna-bcr-umi-smartseq' [33m7939[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for 'rna-seq' [33m7749[2mms[22m[39m
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[33m[2m✓[22m[39m checking preset for 'generic-single-cell-gex' [33m7693[2mms[22m[39m
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[2m Test Files [22m [1m[32m1 passed[39m[22m[90m (1)[39m
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[2m Tests [22m [1m[32m6 passed[39m[22m[90m (6)[39m
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[2m Duration [22m 68.34s[2m (transform 42ms, setup 0ms, collect 576ms, tests 67.55s, environment 0ms, prepare 60ms)[22m
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package/CHANGELOG.md
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package/package.json
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{
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"name": "@platforma-open/milaboratories.mixcr-clonotyping-2.workflow",
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"version": "2.14.
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"version": "2.14.1",
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"description": "Tengo-based template",
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"dependencies": {
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"@platforma-sdk/workflow-tengo": "^4.1.2",
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},
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"devDependencies": {
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"@platforma-sdk/tengo-builder": "^2.1.0",
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"@platforma-open/milaboratories.software-mixcr": "4.7.0-
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"@platforma-open/milaboratories.software-mixcr": "4.7.0-165-develop",
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"@platforma-open/milaboratories.software-ptransform": "^1.3.1",
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"@platforma-sdk/test": "^1.29.17",
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"vitest": "~2.1.8",
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