@platforma-open/milaboratories.immune-assay-data.workflow 1.5.1 → 1.6.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +1 -1
- package/CHANGELOG.md +12 -0
- package/dist/tengo/tpl/build-outputs.plj.gz +0 -0
- package/dist/tengo/tpl/extract-unique-values.plj.gz +0 -0
- package/dist/tengo/tpl/main.plj.gz +0 -0
- package/dist/tengo/tpl/run-alignment.plj.gz +0 -0
- package/package.json +2 -2
- package/src/build-outputs.tpl.tengo +3 -1
- package/src/main.tpl.tengo +3 -1
package/.turbo/turbo-build.log
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@@ -1,6 +1,6 @@
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WARN Issue while reading "/home/runner/work/immune-assay-data/immune-assay-data/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.immune-assay-data.workflow@1.
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> @platforma-open/milaboratories.immune-assay-data.workflow@1.6.1 build /home/runner/work/immune-assay-data/immune-assay-data/workflow
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> rm -rf dist && pl-tengo check && pl-tengo build
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Processing "src/build-outputs.tpl.tengo"...
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package/CHANGELOG.md
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package/package.json
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@@ -1,14 +1,14 @@
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{
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"name": "@platforma-open/milaboratories.immune-assay-data.workflow",
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"version": "1.
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"version": "1.6.1",
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"type": "module",
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"description": "Tengo-based template",
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"dependencies": {
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"@platforma-sdk/workflow-tengo": "5.8.0",
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"@platforma-open/soedinglab.software-mmseqs2": "^1.17.2",
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"@platforma-open/milaboratories.immune-assay-data.coverage-mode-calc": "1.1.3",
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"@platforma-open/milaboratories.immune-assay-data.prepare-fasta": "1.1.3",
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"@platforma-open/milaboratories.immune-assay-data.add-header": "1.1.3",
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"@platforma-open/milaboratories.immune-assay-data.coverage-mode-calc": "1.1.3",
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"@platforma-open/milaboratories.immune-assay-data.fasta-to-tsv": "1.1.3"
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},
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"devDependencies": {
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@@ -206,7 +206,9 @@ self.body(func(inputs) {
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coverageStr := string(inputs.settings.coverageThreshold)
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similarityTypeStr := inputs.settings.similarityType == "sequence-identity" ? "Exact Match" : "BLOSUM"
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// Use block label if provided, otherwise fall back to default technical label
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blockLabel := inputs.customBlockLabel || inputs.defaultBlockLabel || ""
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traceLabel := blockLabel != "" ? blockLabel : "Assay Data (sim:" + similarityTypeStr + ", ident:" + identityStr + ", cov:" + coverageStr + ")"
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trace := pSpec.makeTrace(inputs.datasetSpec,
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{
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package/src/main.tpl.tengo
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@@ -377,7 +377,9 @@ wf.body(func(args) {
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assayDataTsv: ptw.getFile("assayData.tsv"),
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clonesDataTsv: ptw.getFile("clonesData.tsv"),
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uniqueValuesMap: uniqueValuesMap,
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settings: args.settings
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settings: args.settings,
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customBlockLabel: args.customBlockLabel,
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defaultBlockLabel: args.defaultBlockLabel
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})
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assayPframe = buildOutputsResult.output("assayPframe")
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epf = buildOutputsResult.output("epf")
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