@platforma-open/milaboratories.feature-integration.per-cell-metrics 2.1.0 → 2.1.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1 +1 @@
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- {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.0.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.0.tgz"}
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.2.tgz"}
@@ -1 +1 @@
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- {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-csv-meta.6123a4e9b116","entrypoint":[]}
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-csv-meta.cf6a018b1190","entrypoint":[]}
@@ -1 +1 @@
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- {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.0.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.0.tgz"}
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.2.tgz"}
@@ -1 +1 @@
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- {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-panel.e916cefe22b5","entrypoint":[]}
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-panel.ffaaf4bfd56c","entrypoint":[]}
@@ -0,0 +1 @@
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/feature-properties/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/feature-properties/2.1.2.tgz"}
@@ -0,0 +1 @@
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.feature-properties.e27415135da8","entrypoint":[]}
@@ -1 +1 @@
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- {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.0.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.0.tgz"}
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.2.tgz"}
@@ -1 +1 @@
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- {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.main.521aa22c20d6","entrypoint":[]}
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.main.1dc93e97247c","entrypoint":[]}
@@ -1 +1 @@
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- {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.0.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.0.tgz"}
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.2.tgz"}
@@ -1 +1 @@
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- {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.parse-gate.c535b9a2e51e","entrypoint":[]}
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.parse-gate.8aef33d3cd34","entrypoint":[]}
@@ -1 +1 @@
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- {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.0.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.0.tgz"}
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+ {"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.2.tgz","uploadPath":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.2.tgz"}
@@ -1 +1 @@
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- {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.qc-report.0cba6c42f02d","entrypoint":[]}
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+ {"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.qc-report.8d20acfd7651","entrypoint":[]}
@@ -0,0 +1,22 @@
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+ # Auto-generated Dockerfile for Python package
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+ FROM python:3.12-slim
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+
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+ WORKDIR /app
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+
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+
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+
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+ # Always keep basic python packaging tools fresh to avoid CVEs even in old python versions
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+ RUN pip install --upgrade pip wheel setuptools
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+
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+ # Install dependencies to leverage Docker cache
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+ COPY requirements.txt .
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+ RUN pip install --no-cache-dir -r requirements.txt
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+
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+ # Copy package source
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+ COPY . /app
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+
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+ # Set Python path
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+ ENV PYTHONPATH=/app
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+
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+ # Default command (will be overridden by entrypoint)
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+ CMD ["bash"]
@@ -1 +1 @@
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- {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:emit-csv-meta","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.0.tgz","cmd":["python","{pkg}/emit_csv_meta.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-csv-meta.6123a4e9b116","entrypoint":[],"cmd":["python","{pkg}/emit_csv_meta.py"],"pkg":"/app"}}
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:emit-csv-meta","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-csv-meta/2.1.2.tgz","cmd":["python","{pkg}/emit_csv_meta.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-csv-meta.cf6a018b1190","entrypoint":[],"cmd":["python","{pkg}/emit_csv_meta.py"],"pkg":"/app"}}
@@ -1 +1 @@
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- {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:emit-panel","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.0.tgz","cmd":["python","{pkg}/emit_panel.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-panel.e916cefe22b5","entrypoint":[],"cmd":["python","{pkg}/emit_panel.py"],"pkg":"/app"}}
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:emit-panel","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/emit-panel/2.1.2.tgz","cmd":["python","{pkg}/emit_panel.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.emit-panel.ffaaf4bfd56c","entrypoint":[],"cmd":["python","{pkg}/emit_panel.py"],"pkg":"/app"}}
@@ -0,0 +1 @@
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:feature-properties","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/feature-properties/2.1.2.tgz","cmd":["python","{pkg}/emit_feature_properties.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.feature-properties.e27415135da8","entrypoint":[],"cmd":["python","{pkg}/emit_feature_properties.py"],"pkg":"/app"}}
@@ -1 +1 @@
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- {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:main","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.0.tgz","cmd":["python","{pkg}/per_cell_metrics.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.main.521aa22c20d6","entrypoint":[],"cmd":["python","{pkg}/per_cell_metrics.py"],"pkg":"/app"}}
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:main","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/main/2.1.2.tgz","cmd":["python","{pkg}/per_cell_metrics.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.main.1dc93e97247c","entrypoint":[],"cmd":["python","{pkg}/per_cell_metrics.py"],"pkg":"/app"}}
@@ -1 +1 @@
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- {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:parse-gate","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.0.tgz","cmd":["python","{pkg}/parse_gate.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.parse-gate.c535b9a2e51e","entrypoint":[],"cmd":["python","{pkg}/parse_gate.py"],"pkg":"/app"}}
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:parse-gate","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/parse-gate/2.1.2.tgz","cmd":["python","{pkg}/parse_gate.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.parse-gate.8aef33d3cd34","entrypoint":[],"cmd":["python","{pkg}/parse_gate.py"],"pkg":"/app"}}
@@ -1 +1 @@
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- {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:qc-report","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.0.tgz","cmd":["python","{pkg}/qc_report.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"quay.io/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.qc-report.0cba6c42f02d","entrypoint":[],"cmd":["python","{pkg}/qc_report.py"],"pkg":"/app"}}
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+ {"name":"@platforma-open/milaboratories.feature-integration.per-cell-metrics:qc-report","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.feature-integration.per-cell-metrics/qc-report/2.1.2.tgz","cmd":["python","{pkg}/qc_report.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10/main/1.3.6-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.feature-integration.per-cell-metrics.qc-report.8d20acfd7651","entrypoint":[],"cmd":["python","{pkg}/qc_report.py"],"pkg":"/app"}}
package/package.json CHANGED
@@ -1,13 +1,13 @@
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  {
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  "name": "@platforma-open/milaboratories.feature-integration.per-cell-metrics",
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- "version": "2.1.0",
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+ "version": "2.1.2",
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  "files": [
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  "./dist/**/*"
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  ],
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  "type": "module",
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  "devDependencies": {
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  "@platforma-open/milaboratories.runenv-python-3": "1.7.8",
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- "@platforma-sdk/block-tools": "2.12.4"
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+ "@platforma-sdk/block-tools": "2.12.8"
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  },
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  "block-software": {
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  "entrypoints": {
@@ -65,6 +65,24 @@
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  ]
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  }
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  },
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+ "feature-properties": {
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+ "binary": {
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+ "artifact": {
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+ "type": "python",
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+ "registry": "platforma-open",
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+ "environment": "@platforma-open/milaboratories.runenv-python-3:3.12.10",
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+ "dependencies": {
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+ "toolset": "pip",
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+ "requirements": "requirements.txt"
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+ },
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+ "root": "./src"
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+ },
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+ "cmd": [
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+ "python",
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+ "{pkg}/emit_feature_properties.py"
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+ ]
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+ }
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+ },
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  "qc-report": {
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  "binary": {
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  "artifact": {