@platforma-open/milaboratories.clonotype-clustering.model 2.3.0 → 2.5.0

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Files changed (13) hide show
  1. package/.turbo/turbo-build.log +13 -13
  2. package/CHANGELOG.md +12 -0
  3. package/dist/bundle.js +6 -3
  4. package/dist/bundle.js.map +1 -1
  5. package/dist/index.cjs +6 -3
  6. package/dist/index.cjs.map +1 -1
  7. package/dist/index.d.cts +3 -1
  8. package/dist/index.d.ts +3 -1
  9. package/dist/index.js +6 -3
  10. package/dist/index.js.map +1 -1
  11. package/dist/model.json +1 -1
  12. package/package.json +1 -1
  13. package/src/index.ts +6 -3
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
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   WARN  Issue while reading "/home/runner/work/clonotype-clustering/clonotype-clustering/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-open/milaboratories.clonotype-clustering.model@2.3.0 build /home/runner/work/clonotype-clustering/clonotype-clustering/model
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+ > @platforma-open/milaboratories.clonotype-clustering.model@2.5.0 build /home/runner/work/clonotype-clustering/clonotype-clustering/model
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  > tsup && vite build && block-tools build-model
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  CLI Building entry: src/index.ts
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  CLI Cleaning output folder
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  CJS Build start
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  ESM Build start
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- ESM dist/index.js 3.54 KB
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- ESM dist/index.js.map 8.16 KB
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- ESM ⚡️ Build success in 135ms
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- CJS dist/index.cjs 3.54 KB
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- CJS dist/index.cjs.map 8.22 KB
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- CJS ⚡️ Build success in 135ms
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+ CJS dist/index.cjs 3.63 KB
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+ CJS dist/index.cjs.map 8.51 KB
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+ CJS ⚡️ Build success in 136ms
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+ ESM dist/index.js 3.63 KB
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+ ESM dist/index.js.map 8.44 KB
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+ ESM ⚡️ Build success in 136ms
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  DTS Build start
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- DTS ⚡️ Build success in 2214ms
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- DTS dist/index.d.cts 4.03 KB
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- DTS dist/index.d.ts 4.03 KB
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+ DTS ⚡️ Build success in 2187ms
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+ DTS dist/index.d.cts 4.12 KB
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+ DTS dist/index.d.ts 4.12 KB
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  vite v6.2.3 building for production...
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  transforming...
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  ✓ 11 modules transformed.
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  rendering chunks...
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  computing gzip size...
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- dist/bundle.js 189.41 kB │ gzip: 37.08 kB │ map: 400.73 kB
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- dist/bundle.js 202.40 kB │ gzip: 37.75 kB │ map: 402.33 kB
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- ✓ built in 960ms
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+ dist/bundle.js 189.50 kB │ gzip: 37.13 kB │ map: 401.01 kB
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+ dist/bundle.js 202.50 kB │ gzip: 37.80 kB │ map: 402.61 kB
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+ ✓ built in 824ms
package/CHANGELOG.md CHANGED
@@ -1,5 +1,17 @@
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  # @platforma-open/milaboratories.clonotype-clustering.model
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+ ## 2.5.0
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+
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+ ### Minor Changes
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+
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+ - d5a09ff: Expose clustering options
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+
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+ ## 2.4.0
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+
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+ ### Minor Changes
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+ - 33ea3aa: Allow separate input for heavy and light
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+
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  ## 2.3.0
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  ### Minor Changes
package/dist/bundle.js CHANGED
@@ -6158,9 +6158,13 @@
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  }
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  const model = L.create().withArgs({
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  identity: 0.8,
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- clusterBothChains: true,
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  sequenceType: "aminoacid",
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- sequencesRef: []
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+ sequencesRef: [],
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+ similarityType: "sequence-identity",
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+ coverageThreshold: 0.8,
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+ // default value matching MMseqs2 default
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+ coverageMode: 1
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+ // default to coverage of target
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  }).withUiState({
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  title: "Clonotype Clustering",
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  tableState: {
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  name: "pl7.app/vdj/sequence",
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  domain: {
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  "pl7.app/vdj/feature": feature,
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- "pl7.app/vdj/scClonotypeChain": "A",
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  "pl7.app/vdj/scClonotypeChain/index": "primary",
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  "pl7.app/alphabet": ctx.args.sequenceType
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  }