@platforma-open/milaboratories.clonotype-clustering.model 2.12.1 → 2.13.0

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Files changed (13) hide show
  1. package/.turbo/turbo-build.log +13 -13
  2. package/CHANGELOG.md +6 -0
  3. package/dist/bundle.js +9 -1
  4. package/dist/bundle.js.map +1 -1
  5. package/dist/index.cjs +9 -1
  6. package/dist/index.cjs.map +1 -1
  7. package/dist/index.d.cts +2 -0
  8. package/dist/index.d.ts +2 -0
  9. package/dist/index.js +9 -1
  10. package/dist/index.js.map +1 -1
  11. package/dist/model.json +1 -1
  12. package/package.json +1 -1
  13. package/src/index.ts +10 -0
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
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   WARN  Issue while reading "/home/runner/work/clonotype-clustering/clonotype-clustering/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-open/milaboratories.clonotype-clustering.model@2.12.1 build /home/runner/work/clonotype-clustering/clonotype-clustering/model
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+ > @platforma-open/milaboratories.clonotype-clustering.model@2.13.0 build /home/runner/work/clonotype-clustering/clonotype-clustering/model
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  > tsup && vite build && block-tools build-model
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  CLI Building entry: src/index.ts
@@ -11,21 +11,21 @@
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  CLI Cleaning output folder
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  CJS Build start
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  ESM Build start
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- CJS dist/index.cjs 6.22 KB
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- CJS dist/index.cjs.map 15.31 KB
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- CJS ⚡️ Build success in 216ms
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- ESM dist/index.js 6.23 KB
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- ESM dist/index.js.map 15.21 KB
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- ESM ⚡️ Build success in 216ms
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+ CJS dist/index.cjs 6.49 KB
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+ CJS dist/index.cjs.map 16.04 KB
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+ CJS ⚡️ Build success in 185ms
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+ ESM dist/index.js 6.48 KB
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+ ESM dist/index.js.map 15.95 KB
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+ ESM ⚡️ Build success in 184ms
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  DTS Build start
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- DTS ⚡️ Build success in 2845ms
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- DTS dist/index.d.cts 5.81 KB
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- DTS dist/index.d.ts 5.81 KB
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+ DTS ⚡️ Build success in 2455ms
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+ DTS dist/index.d.cts 5.85 KB
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+ DTS dist/index.d.ts 5.85 KB
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  vite v6.3.5 building for production...
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  transforming...
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  ✓ 68 modules transformed.
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  rendering chunks...
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  computing gzip size...
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- dist/bundle.js 241.84 kB │ gzip: 46.03 kB │ map: 515.03 kB
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- dist/bundle.js 257.09 kB │ gzip: 46.76 kB │ map: 516.70 kB
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- ✓ built in 1.03s
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+ dist/bundle.js 242.11 kB │ gzip: 46.10 kB │ map: 515.68 kB
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+ dist/bundle.js 257.37 kB │ gzip: 46.84 kB │ map: 517.35 kB
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+ ✓ built in 947ms
package/CHANGELOG.md CHANGED
@@ -1,5 +1,11 @@
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  # @platforma-open/milaboratories.clonotype-clustering.model
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+ ## 2.13.0
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+
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+ ### Minor Changes
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+
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+ - c722cfb: Included input sequence trimming option for clustering
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+
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  ## 2.12.1
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  ### Patch Changes
package/dist/bundle.js CHANGED
@@ -7198,8 +7198,12 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
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  similarityType: "sequence-identity",
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  coverageThreshold: 0.8,
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  // default value matching MMseqs2 default
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- coverageMode: 0
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+ coverageMode: 0,
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  // default to coverage of query and target
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+ trimStart: 0,
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+ // default to no trimming from start
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+ trimEnd: 0
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+ // default to no trimming from end
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  }).withUiState({
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  title: "Clonotype Clustering",
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  tableState: createPlDataTableStateV2(),
@@ -7328,6 +7332,10 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
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  var _a, _b;
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  const msaCols = (_b = (_a = ctx.outputs) == null ? void 0 : _a.resolve("msaPf")) == null ? void 0 : _b.getPColumns();
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  if (!msaCols) return void 0;
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+ const trimEnabled = (ctx.args.trimStart ?? 0) > 0 || (ctx.args.trimEnd ?? 0) > 0;
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+ if (trimEnabled) {
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+ return createPFrameForGraphs(ctx, msaCols);
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+ }
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  const datasetRef = ctx.args.datasetRef;
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  if (datasetRef === void 0)
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  return void 0;