@platforma-open/milaboratories.clonotype-browser-3 2.0.4 → 2.0.6

package/block-pack/CHANGELOG.md

@@ -0,0 +1,200 @@
+# @platforma-open/milaboratories.clonotype-browser-3
+
+## 2.0.6
+
+### Patch Changes
+
+- 2bb6a30: Migration to the new SDK versions. Restore the released annotation filter behavior: per-sample abundance columns are offered as single entries without a sample picker or per-sample split.
+
+## 2.0.5
+
+### Patch Changes
+
+- f54d8fe: SDK Upgrade, fix page title
+
+## 2.0.4
+
+### Patch Changes
+
+- Updated dependencies [ebda7f8]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@2.0.4
+  - @platforma-open/milaboratories.clonotype-browser-3.model@2.0.4
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@2.0.4
+
+## 2.0.3
+
+### Patch Changes
+
+- 8618c84: SDK update
+- Updated dependencies [8618c84]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@2.0.3
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@2.0.3
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@2.0.3
+
+## 2.0.2
+
+### Patch Changes
+
+- b8ba916: Update SDK
+- Updated dependencies [b8ba916]
+- Updated dependencies [1603c3a]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@2.0.2
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@2.0.2
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@2.0.2
+
+## 2.0.1
+
+### Patch Changes
+
+- d298e28: dont show column header linker postfix
+- Updated dependencies [d298e28]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@2.0.1
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@2.0.1
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@2.0.1
+
+## 2.0.0
+
+### Major Changes
+
+- 6523b2c: Support peptides
+- a2ec81f: Support peptides
+
+### Minor Changes
+
+- bccd98a: show table with partial data
+
+### Patch Changes
+
+- Updated dependencies [6523b2c]
+- Updated dependencies [a2ec81f]
+- Updated dependencies [bccd98a]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@2.0.0
+  - @platforma-open/milaboratories.clonotype-browser-3.model@2.0.0
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@2.0.0
+
+## 1.1.11
+
+### Patch Changes
+
+- Updated dependencies [6a42056]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.2.0
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.3.0
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.3.0
+
+## 1.1.10
+
+### Patch Changes
+
+- Updated dependencies [3753a29]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.1.0
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.2.0
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.2.0
+
+## 1.1.9
+
+### Patch Changes
+
+- Updated dependencies [e363360]
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.5
+
+## 1.1.8
+
+### Patch Changes
+
+- ba419d2: Mark the annotation column as a discrete filter and expose step labels via `pl7.app/discreteValues`. This lets downstream blocks (e.g. TCR/antibody lead selection) render the annotation column as a multi-select dropdown instead of a free-text string filter.
+- Updated dependencies [ba419d2]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.7
+
+## 1.1.7
+
+### Patch Changes
+
+- 6a9a242: Publish pending changes from #24: SDK bump (model 1.65.10, ui-vue 1.66.0) and AnnotationModal prop/v-model refactor. Also bump `@platforma-sdk/block-tools` to 2.7.11.
+- Updated dependencies [6a9a242]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.1.4
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.4
+
+## 1.1.6
+
+### Patch Changes
+
+- Updated dependencies [f13bde7]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.6
+
+## 1.1.5
+
+### Patch Changes
+
+- Updated dependencies [9c2a423]
+- Updated dependencies [8eea85f]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.5
+
+## 1.1.4
+
+### Patch Changes
+
+- 96c7232: Migration to createTable v3 API
+- Updated dependencies [96c7232]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.4
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.1.3
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.3
+
+## 1.1.3
+
+### Patch Changes
+
+- d25c939: Update sdk
+- Updated dependencies [d25c939]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.1.2
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.2
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.3
+
+## 1.1.2
+
+### Patch Changes
+
+- Updated dependencies [219d5e8]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.1.1
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.1
+
+## 1.1.1
+
+### Patch Changes
+
+- Updated dependencies [0e6b850]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.1.0
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.1.0
+
+## 1.1.0
+
+### Minor Changes
+
+- b811dd0: Update link to github project
+
+## 1.0.3
+
+### Patch Changes
+
+- Updated dependencies [6b9dab5]
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.0.2
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.0.2
+
+## 1.0.2
+
+### Patch Changes
+
+- Updated dependencies [7f7ae7a]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.2
+
+## 1.0.1
+
+### Patch Changes
+
+- 8ba9261: release
+- cfc1d27: Init commit
+- Updated dependencies [950a4cd]
+- Updated dependencies [8ba9261]
+- Updated dependencies [cfc1d27]
+  - @platforma-open/milaboratories.clonotype-browser-3.workflow@1.0.1
+  - @platforma-open/milaboratories.clonotype-browser-3.model@1.0.1
+  - @platforma-open/milaboratories.clonotype-browser-3.ui@1.0.1

package/block-pack/description.md

@@ -0,0 +1,5 @@
+# Overview
+
+Provides an interactive interface for browsing, exploring, and annotating sequences across samples. The block accepts T/B cell receptor clonotypes from V(D)J sequencing or peptides from display-selection campaigns, and enables users to examine sequence characteristics, frequencies, and distributions.
+
+The block supports custom annotation scripts that allow users to tag sequences based on various criteria such as frequency thresholds, sequence characteristics, or sample-specific patterns. Annotated sequences can be tracked, filtered, and exported for downstream analysis. The interface provides multiple views including per-sample sequence tables, overlap analysis between samples, and statistical summaries of sequence distributions.

package/block-pack/manifest.json

@@ -0,0 +1 @@
+{"schema":"v2","description":{"id":{"organization":"milaboratories","name":"clonotype-browser-3","version":"2.0.6"},"components":{"workflow":{"type":"workflow-v1","main":{"type":"relative","path":"main.plj.gz"}},"model":{"type":"relative","path":"model.json"},"ui":{"type":"relative","path":"ui.tgz"}},"meta":{"title":"Sequence Browser","description":"Interactive browser for exploring and annotating sequences (T/B cell clonotypes or peptides) with custom tags for tracking, filtering, and downstream analysis.","longDescription":{"type":"relative","path":"description.md"},"changelog":{"type":"relative","path":"CHANGELOG.md"},"logo":{"type":"relative","path":"block-logo.png"},"url":"https://github.com/platforma-open/clonotype-browser","support":"mailto:support@milaboratories.com","tags":["airr","vdj","peptide","annotation"],"organization":{"name":"MiLaboratories Inc","url":"https://milaboratories.com/","logo":{"type":"relative","path":"organization-logo.png"}},"marketplaceRanking":16700},"featureFlags":{"supportsLazyState":true,"supportsPframeQueryRanking":true,"requiresUIAPIVersion":3,"requiresModelAPIVersion":2,"requiresCreatePTable":2,"requiresPFramesVersion":1001031,"requiresPFrameSpec":true,"requiresPFrame":true,"requiresDialog":true,"requiresColumnsCollection":true}},"timestamp":1784102775535,"files":[{"name":"main.plj.gz","size":840322,"sha256":"4CF8D387CC6448BAFBF2DB03E138A1C09CE0D09D0FA47FF029376729FC04AA1B"},{"name":"model.json","size":539237,"sha256":"947510A1DDAC245EF9AA8E1D84788EEC213BA3C546BFA2607A2DB896961F00BB"},{"name":"ui.tgz","size":3902939,"sha256":"FBB9377E12D851F573C16FF90B381E24D59BC77D234A1388900E300394A9E30B"},{"name":"organization-logo.png","size":24439,"sha256":"FA71390C77C91E4B7FAAE5640D00F92F1E3F2869296F68B6040DD7CC549A50B5"},{"name":"description.md","size":752,"sha256":"E5836E9DDA58A09050D3EDE5BFB1CFC1FBA59BDA5538F64A4D12E5AA9E19B186"},{"name":"CHANGELOG.md","size":5481,"sha256":"F3425D234D69FFA534157647CCA9D92EB7EDF6B8B4891A4968E8A780925BA680"},{"name":"block-logo.png","size":21527,"sha256":"6BB33BAF0CD039549661B51AE490373BE60D1811EC71F5023400928293BC2427"}]}