@platforma-open/milaboratories.3d-structure-prediction.software 1.0.5 → 1.0.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +314 -314
- package/CHANGELOG.md +6 -0
- package/dist/artifacts/py-archive/archive.json +1 -1
- package/dist/artifacts/py-docker/docker_x64.json +1 -1
- package/dist/tengo/software/immunebuilder-predict.sw.json +1 -1
- package/package.json +1 -1
- package/pkg-platforma-open-milaboratories.3d-structure-prediction.software-py-archive-1.0.6.tgz +0 -0
- package/pkg-platforma-open-milaboratories.3d-structure-prediction.software-py-archive-1.0.5.tgz +0 -0
package/.turbo/turbo-build.log
CHANGED
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@@ -1,6 +1,6 @@
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WARN Issue while reading "/home/runner/work/3d-structure-prediction/3d-structure-prediction/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.3d-structure-prediction.software@1.0.
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> @platforma-open/milaboratories.3d-structure-prediction.software@1.0.6 build /home/runner/work/3d-structure-prediction/3d-structure-prediction/software
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> pl-pkg build
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[32minfo[39m: Building docker images...
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#0 building with "default" instance using docker driver
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#1 [internal] load build definition from Dockerfile
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#1 transferring dockerfile: 3.16kB done
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#1 transferring dockerfile: 3.16kB 0.0s done
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#1 DONE 0.0s
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#2 resolve image config for docker-image://docker.io/docker/dockerfile:1
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#4 docker-image://docker.io/docker/dockerfile:1@sha256:2780b5c3bab67f1f76c781860de469442999ed1a0d7992a5efdf2cffc0e3d769
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#4 resolve docker.io/docker/dockerfile:1@sha256:2780b5c3bab67f1f76c781860de469442999ed1a0d7992a5efdf2cffc0e3d769 done
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#4 sha256:bcb5d2ab7af67a669c932851c8bb8a26895dda6258900edfd7429d57bfd3592f 14.11MB / 14.11MB 0.1s done
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#5 [internal] load metadata for docker.io/mambaorg/micromamba:1.5.10
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#9 [1/7] FROM docker.io/mambaorg/micromamba:1.5.10@sha256:e3797091302382ea841498bc93a7b0a50f7c1448333d5e946d2d1608d0c5f43d
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#9 resolve docker.io/mambaorg/micromamba:1.5.10@sha256:e3797091302382ea841498bc93a7b0a50f7c1448333d5e946d2d1608d0c5f43d done
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#10 [2/7] RUN micromamba install -y -n base -c bioconda -c conda-forge python=3.12.10 anarci hmmer biopython=1.85 openmm=8.3.1 pdbfixer=1.12.0 numpy=2.4.3 scipy=1.17.1 && micromamba clean --all --yes
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#10 19.47 + tzdata 2025c hc9c84f9_1 conda-forge 119kB
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#10 19.47 + ca-certificates 2026.4.22 hbd8a1cb_0 conda-forge 131kB
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#10 19.47 + tk 8.6.13 noxft_h366c992_103 conda-forge 3MB
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#10 19.47 + libsqlite 3.53.1 h0c1763c_0 conda-forge 955kB
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#10 19.47 + ncurses 6.6 hdb14827_0 conda-forge 919kB
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#10 19.47 + libcufft 11.4.1.4 hecca717_1 conda-forge 162MB
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#10 19.47 + setuptools 82.0.1 pyh332efcf_0 conda-forge 640kB
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#10 25.92 libgomp-15.2.0-he0feb66_19.conda 604kB
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#10 25.92 liblapack-3.11.0-7_h47877c9_openblas.conda 19kB
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#10 25.92 liblzma-5.8.3-hb03c661_0.conda 113kB
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#10 25.92 libnsl-2.0.1-hb9d3cd8_1.conda 34kB
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#10 25.92 libopenblas-0.3.33-pthreads_h94d23a6_0.conda 6MB
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#10 25.92 libsqlite-3.53.1-h0c1763c_0.conda 955kB
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#10 25.92 libstdcxx-15.2.0-h934c35e_19.conda 6MB
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#10 25.92 libstdcxx-ng-15.2.0-hdf11a46_19.conda 28kB
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#10 25.92 libuuid-2.42.1-h5347b49_0.conda 40kB
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#10 25.92 libxcrypt-4.4.36-hd590300_1.conda 100kB
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#10 25.92 libzlib-1.3.2-h25fd6f3_2.conda 64kB
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#10 25.92 mpi-1.0-openmpi.tar.bz2 4kB
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#10 25.92 ncurses-6.6-hdb14827_0.conda 919kB
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#10 25.92 numpy-2.4.3-py312h33ff503_0.conda 9MB
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#10 25.92 ocl-icd-2.3.3-hb9d3cd8_0.conda 107kB
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#10 25.92 ocl-icd-system-1.0.0-1.tar.bz2 4kB
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#10 25.92 opencl-headers-2025.06.13-hecca717_0.conda 56kB
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#10 25.92 openmm-8.3.1-py312h50c43f0_0.conda 13MB
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#10 25.92 openmpi-4.1.6-hc5af2df_101.conda 4MB
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#10 25.92 openssl-3.6.2-h35e630c_0.conda 3MB
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#10 25.92 packaging-26.2-pyhc364b38_0.conda 92kB
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#10 25.92 pdbfixer-1.12-pyhd8ed1ab_1.conda 546kB
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#10 25.92 pip-26.1.1-pyh8b19718_0.conda 1MB
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#10 25.92 python-3.12.10-h9e4cc4f_0_cpython.conda 31MB
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#10 25.92 python_abi-3.12-8_cp312.conda 7kB
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platforma-open.milaboratories.3d-structure-prediction.software.py-docker.b5ab99a62334: digest: sha256:91be83929f6853320cefc38f5491e18b30bef25730e73006990e1496520efb46 size: 4073
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{"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.
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{"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.6.tgz","uploadPath":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.6.tgz"}
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{"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-docker.
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{"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-docker.b5ab99a62334","entrypoint":["/usr/local/bin/_entrypoint.sh"]}
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{"name":"@platforma-open/milaboratories.3d-structure-prediction.software:immunebuilder-predict","docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-docker.
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{"name":"@platforma-open/milaboratories.3d-structure-prediction.software:immunebuilder-predict","docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-docker.b5ab99a62334","entrypoint":["/usr/local/bin/_entrypoint.sh"],"cmd":["python","/app/run_immunebuilder.py"],"pkg":"/app"},"binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.6.tgz","cmd":["python","{pkg}/run_immunebuilder.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10-atls","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10-atls/main/1.2.7-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}}}
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