@platforma-open/milaboratories.3d-structure-prediction.software 1.0.0 → 1.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +208 -197
- package/CHANGELOG.md +7 -0
- package/dist/artifacts/py-archive/archive.json +1 -1
- package/dist/artifacts/py-archive/docker_x64.json +1 -1
- package/dist/tengo/software/immunebuilder-predict.sw.json +1 -1
- package/package.json +2 -2
- package/pkg-platforma-open-milaboratories.3d-structure-prediction.software-py-archive-1.0.1.tgz +0 -0
- package/src_python/requirements.txt +1 -0
- package/pkg-platforma-open-milaboratories.3d-structure-prediction.software-py-archive-1.0.0.tgz +0 -0
package/.turbo/turbo-build.log
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WARN Issue while reading "/home/runner/work/3d-structure-prediction/3d-structure-prediction/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.3d-structure-prediction.software@1.0.
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> @platforma-open/milaboratories.3d-structure-prediction.software@1.0.1 build /home/runner/work/3d-structure-prediction/3d-structure-prediction/software
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#10 13.68 Installing collected packages: nvidia-cusparselt-cu12, mpmath, urllib3, typing-extensions, triton, sympy, nvidia-nvtx-cu12, nvidia-nvjitlink-cu12, nvidia-nccl-cu12, nvidia-curand-cu12, nvidia-cufile-cu12, nvidia-cuda-runtime-cu12, nvidia-cuda-nvrtc-cu12, nvidia-cuda-cupti-cu12, nvidia-cublas-cu12, numpy, networkx, MarkupSafe, idna, fsspec, filelock, einops, charset_normalizer, certifi, scipy, requests, openmm, nvidia-cusparse-cu12, nvidia-cufft-cu12, nvidia-cudnn-cu12, jinja2, biopython, pdbfixer, nvidia-cusolver-cu12, torch, ImmuneBuilder
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#10 61.34 Successfully installed ImmuneBuilder-1.2 MarkupSafe-3.0.3 biopython-1.85 certifi-2026.4.22 charset_normalizer-3.4.7 einops-0.8.2 filelock-3.29.0 fsspec-2026.4.0 idna-3.13 jinja2-3.1.6 mpmath-1.3.0 networkx-3.6.1 numpy-2.4.4 nvidia-cublas-cu12-12.6.4.1 nvidia-cuda-cupti-cu12-12.6.80 nvidia-cuda-nvrtc-cu12-12.6.77 nvidia-cuda-runtime-cu12-12.6.77 nvidia-cudnn-cu12-9.5.1.17 nvidia-cufft-cu12-11.3.0.4 nvidia-cufile-cu12-1.11.1.6 nvidia-curand-cu12-10.3.7.77 nvidia-cusolver-cu12-11.7.1.2 nvidia-cusparse-cu12-12.5.4.2 nvidia-cusparselt-cu12-0.6.3 nvidia-nccl-cu12-2.26.2 nvidia-nvjitlink-cu12-12.6.85 nvidia-nvtx-cu12-12.6.77 openmm-8.3.1 pdbfixer-1.12.0 requests-2.33.1 scipy-1.17.1 sympy-1.14.0 torch-2.7.0 triton-3.3.0 typing-extensions-4.15.0 urllib3-2.7.0
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#10 61.34 WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning.
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{"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.
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{"type":"python","platform":"linux-x64","registryURL":"https://bin.pl-open.science/","registryName":"platforma-open","remoteArtifactLocation":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.1.tgz","uploadPath":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.1.tgz"}
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{"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-archive.
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{"type":"docker","platform":"linux-x64","remoteArtifactLocation":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-archive.8ac7e5bdb164","entrypoint":[]}
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{"name":"@platforma-open/milaboratories.3d-structure-prediction.software:immunebuilder-predict","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.
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{"name":"@platforma-open/milaboratories.3d-structure-prediction.software:immunebuilder-predict","binary":{"type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.3d-structure-prediction.software/py-archive/1.0.1.tgz","cmd":["python","{pkg}/run_immunebuilder.py"],"envVars":[],"runEnv":{"name":"@platforma-open/milaboratories.runenv-python-3:3.12.10-atls","type":"python","registry":"platforma-open","package":"software/platforma-open/milaboratories.runenv-python-3.12.10-atls/main/1.2.7-{os}-{arch}.tgz","python-version":"3.12.10","envVars":[],"binDir":"bin"},"toolset":"pip","dependencies":{"requirements":"requirements.txt"}},"docker":{"tag":"containers.pl-open.science/milaboratories/pl-containers:platforma-open.milaboratories.3d-structure-prediction.software.py-archive.8ac7e5bdb164","entrypoint":[],"cmd":["python","{pkg}/run_immunebuilder.py"],"pkg":"/app"}}
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ADDED
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