@plantnet/planttaxomatcher 0.1.1 → 0.1.3

package/dist/index.js

@@ -101,7 +101,16 @@ var jobConfigSchema = z3.object({
    * resolved version on `jobs.referential_version` so re-runs are
    * reproducible even if a newer snapshot lands later.
    */
-  referentialVersion: z3.string().min(1).optional()
+  referentialVersion: z3.string().min(1).optional(),
+  /**
+   * Row filter: keep only rows whose `filterColumn` value equals
+   * `filterValue` (trimmed, case-insensitive); all other rows are skipped at
+   * ingest (no match query created). Both must be set for the filter to
+   * apply. Lets a user match a subset of a mixed file (e.g. only
+   * `kingdom = Plantae`).
+   */
+  filterColumn: z3.string().nullable().optional(),
+  filterValue: z3.string().nullable().optional()
 });
 var wcvpSnapshotSummarySchema = z3.object({
   version: z3.string(),
@@ -1046,6 +1055,7 @@ program.command("whoami").description("Show current user").action(async () => {
   const creds = await requireCredentials();
   const me = await apiClient.me(creds);
   console.log(`${me.displayName}  team=${me.teamId}  scopes=${me.scopes.join(",")}`);
+  console.log(`server=${creds.server}`);
 });
 program.command("list").description("List recent jobs").action(async () => {
   const creds = await requireCredentials();
@@ -1070,7 +1080,7 @@ program.command("submit <files...>").description(
 ).option(
   "--name <label>",
   "Job name override (single file only; ignored when multiple files match \u2014 the file name is used)"
-).requiredOption("--name-column <name>", "Column holding the scientific name").option("--id-column <name>", "Column holding a known ID").option("--family-column <name>", "Column holding family").option("--genus-column <name>", "Column holding genus").option("--rank-column <name>", "Column holding rank").option("--author-column <name>", "Column holding authorship").option("--author-mode <mode>", "ignore|prefer|strict", "prefer").option("--parallel <n>", "Per-job parallelism", "4").option("--review-mode <mode>", "off|recommended|strict", "recommended").option(
+).requiredOption("--name-column <name>", "Column holding the scientific name").option("--id-column <name>", "Column holding a known ID").option("--family-column <name>", "Column holding family").option("--genus-column <name>", "Column holding genus").option("--rank-column <name>", "Column holding rank").option("--author-column <name>", "Column holding authorship").option("--filter-column <name>", "Only process rows where this column matches --filter-value; others are skipped").option("--filter-value <value>", "Value the --filter-column must equal (trimmed, case-insensitive)").option("--author-mode <mode>", "ignore|prefer|strict", "prefer").option("--parallel <n>", "Per-job parallelism", "4").option("--review-mode <mode>", "off|recommended|strict", "recommended").option(
   "--keep-infraspecific",
   "Keep infraspecific accepted taxa (varieties, subspecies, forms) instead of collapsing them up to the species",
   false
@@ -1126,6 +1136,8 @@ ${file}`));
     genusColumn: opts.genusColumn ? String(opts.genusColumn) : null,
     rankColumn: opts.rankColumn ? String(opts.rankColumn) : null,
     authorColumn: opts.authorColumn ? String(opts.authorColumn) : null,
+    filterColumn: opts.filterColumn ? String(opts.filterColumn) : null,
+    filterValue: opts.filterValue != null ? String(opts.filterValue) : null,
     authorMode: String(opts.authorMode ?? "prefer"),
     matchAuthors: true,
     parallelism: Number(opts.parallel ?? 4),

package/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@plantnet/planttaxomatcher",
-    "version": "0.1.1",
+    "version": "0.1.3",
     "description": "PlantTaxoMatcher CLI — reconcile plant names against WCVP via the PlantTaxoMatcher API.",
     "type": "module",
     "engines": {