@pipeworx/mcp-mesh 0.1.3 → 0.2.0

package/README.md

@@ -2,7 +2,7 @@
 
 NLM MeSH (Medical Subject Headings) MCP.
 
-Part of [Pipeworx](https://pipeworx.io) — an MCP gateway connecting AI agents to 1882+ live data sources. This is an independent, unofficial integration — not affiliated with, endorsed by, or published by the upstream provider.
+Part of [Pipeworx](https://pipeworx.io) — an MCP gateway connecting AI agents to 1856+ live data sources. This is an independent, unofficial integration — not affiliated with, endorsed by, or published by the upstream provider.
 
 ## Tools
 
@@ -56,7 +56,7 @@ directly, instead of just this one's:
 }
 ```
 
-Both URLs reach the same gateway and the same 1882+ data sources. The
+Both URLs reach the same gateway and the same 1856+ data sources. The
 only difference is which pack's tools are listed **directly**; `ask_pipeworx`
 reaches all of them from either one.
 
@@ -70,10 +70,12 @@ curl -X POST https://gateway.pipeworx.io/v1/tools/search_descriptors \
 
 No account needed for the first calls. Inspect any tool: `GET https://gateway.pipeworx.io/v1/tools/search_descriptors`. Find one: `POST https://gateway.pipeworx.io/v1/tools/search_packs` with `{"query":"..."}`.
 
-## Standalone (no gateway account)
+## Run it from npm
 
-This package also runs as a local stdio MCP server — no Pipeworx account, no
-gateway round-trip:
+`@pipeworx/mcp-mesh` is a local stdio bridge to the Pipeworx gateway: your MCP client
+starts it with `npx`, and it forwards every call to the same
+`https://gateway.pipeworx.io/mesh/mcp` endpoint shown above. It needs network access;
+there is no offline mode.
 
 ```json
 {
@@ -86,15 +88,18 @@ gateway round-trip:
 }
 ```
 
-Or run it directly to confirm it starts:
+Without a key it calls anonymously, capped at 50 calls a day. A free account
+raises that to 200 a day: get a key at https://pipeworx.io/signup and add
+`"env": { "PIPEWORX_API_KEY": "<your key>" }` to the server entry.
+The key is sent as a Bearer token, the same way a hosted connection sends it,
+so calls are metered and billed exactly as they are there.
 
-```bash
-npx -y @pipeworx/mcp-mesh
-```
+It lists **only** this pack's tools by default. Set `PIPEWORX_META_TOOLS=1` to
+also list `ask_pipeworx` and the other gateway-wide tools.
 
-It speaks MCP over stdin/stdout and answers `initialize`/`tools/list`/`tools/call`
-for **only** this pack's tools — none of the shared meta-tools the gateway
-connection above adds. Same source, same tools, no ask_pipeworx routing.
+Behind an HTTPS proxy: Node's built-in `fetch` does not read `HTTPS_PROXY` by
+default. Newer Node releases honour it when `NODE_USE_ENV_PROXY=1` is set; check
+your Node version's documentation.
 
 ## Using with ask_pipeworx
 

package/bin/cli.js

@@ -1,17 +1,61 @@
 #!/usr/bin/env node
+// Entry point for `npx @pipeworx/mcp-<slug>` in gateway mode (bin/cli.js).
 //
-// Entry point for `npx @pipeworx/mcp-<slug>`.
+// A stdio MCP server that relays every message to the Pipeworx gateway's
+// /<slug>/mcp endpoint -- fleet #3759, docs/standalone-via-gateway-plan.md.
+// It carries no pack code and has no local mode. The relay itself lives in
+// ../lib/index.js (copied from scripts/templates/standalone-gateway-lib.js);
+// this file only owns stdin/stdout.
 //
-// Packs ship as raw TypeScript (no build step — see publish-pack.sh for why:
-// tsx sidesteps every extensionless-import / bare-JSON-import edge case a
-// per-pack tsc build would have to solve one pack at a time). This file
-// registers tsx's ESM loader programmatically, then hands off to src/server.ts,
-// which wraps the pack's {tools, callTool} export in a stdio MCP server.
+// Copied VERBATIM into every gateway-mode package by scripts/publish-pack.sh.
+// Edit scripts/templates/standalone-gateway-cli.js in the monorepo, never a
+// per-pack copy. Zero dependencies, Node 18+.
 //
-// Copied verbatim into every published pack repo by scripts/publish-pack.sh —
-// edit this file, not a per-pack copy.
-import { register } from 'tsx/esm/api';
+// stdout carries newline-delimited JSON-RPC and nothing else; every diagnostic
+// goes to stderr, because a single stray line on stdout breaks the host's
+// parser.
+import { createInterface } from 'node:readline';
+import { relay, bridgeConfig } from '../lib/index.js';
 
-register();
+const cfg = bridgeConfig();
+const warn = (line) => process.stderr.write(`${line}\n`);
+const write = (msg) => { if (msg) process.stdout.write(`${JSON.stringify(msg)}\n`); };
 
-await import('../src/server.ts');
+const pending = new Set();
+function track(p) {
+  pending.add(p);
+  p.finally(() => pending.delete(p));
+}
+
+async function handleLine(line) {
+  const text = line.trim();
+  if (!text) return;
+  let message;
+  try {
+    message = JSON.parse(text);
+  } catch {
+    write({ jsonrpc: '2.0', id: null, error: { code: -32700, message: 'Parse error' } });
+    return;
+  }
+  // A JSON-RPC batch: relay each member, answer with the non-notification replies.
+  if (Array.isArray(message)) {
+    const replies = (await Promise.all(message.map((m) => relay(m, { cfg, warn })))).filter(Boolean);
+    if (replies.length) write(replies);
+    return;
+  }
+  write(await relay(message, { cfg, warn }));
+}
+
+// Requests are handled concurrently and answered as they finish: JSON-RPC ids
+// let the host match them, and a slow tool call must not hold up a ping.
+const rl = createInterface({ input: process.stdin, crlfDelay: Infinity });
+rl.on('line', (line) => {
+  track(handleLine(line).catch((err) => warn(`pipeworx-standalone: ${err && err.stack ? err.stack : err}`)));
+});
+rl.on('close', async () => {
+  // stdin closed: finish what is in flight, then exit.
+  while (pending.size) await Promise.allSettled([...pending]);
+  // Exit only once stdout has flushed: on a pipe that is not synchronous
+  // everywhere, and a bare exit can drop the last reply.
+  process.stdout.write('', () => process.exit(0));
+});

package/lib/index.js

@@ -0,0 +1,333 @@
+// @pipeworx/mcp-<slug> -- library half of the gateway bridge (lib/index.js).
+//
+// Copied VERBATIM into every gateway-mode pack package by scripts/publish-pack.sh
+// (fleet #3759, docs/standalone-via-gateway-plan.md section 1). There is no
+// per-pack templating: the slug and version are read from this package's own
+// package.json (`pipeworx.slug`, `version`) at load time, so the same bytes
+// ship in every package and the source hash can cover them once. Edit this
+// file in the monorepo (scripts/templates/standalone-gateway-lib.js), never a
+// per-pack copy.
+//
+// What it is: a relay. Every JSON-RPC message goes to
+// ${PIPEWORX_GATEWAY_URL:-https://gateway.pipeworx.io}/<slug>/mcp, the same
+// endpoint a hosted MCP client uses, so tiers, rate limits and credits apply
+// exactly as they do there. There is no local mode: the pack's code is not in
+// this package.
+//
+// Zero dependencies, plain ESM, Node 18+ (global fetch). Nothing here writes
+// to stdout -- bin/cli.js owns stdout and it carries JSON-RPC only.
+//
+// Environment:
+//   PIPEWORX_API_KEY      sent as `Authorization: Bearer <key>`. Never as
+//                         X-API-Key: the gateway reads a pwx_ key sent that way
+//                         as an unvalidated BYO string with no account.
+//   PIPEWORX_GATEWAY_URL  gateway base URL (no path), default the public gateway.
+//   PIPEWORX_META_TOOLS=1 list the gateway-wide tools (ask_pipeworx, ...) too.
+//   PIPEWORX_TIMEOUT_MS   per-request timeout, default 120000.
+
+import { readFileSync } from 'node:fs';
+
+const readJson = (rel) => JSON.parse(readFileSync(new URL(rel, import.meta.url), 'utf8'));
+
+const PKG = readJson('../package.json');
+export const SLUG = PKG.pipeworx && PKG.pipeworx.slug;
+if (typeof SLUG !== 'string' || !/^[a-z0-9][a-z0-9_-]*$/.test(SLUG)) {
+  throw new Error(`${PKG.name}: package.json carries no valid pipeworx.slug -- this package was built wrong`);
+}
+/**
+ * The pack's slug on the GATEWAY: the /<slug>/mcp route and the `_meta.pack`
+ * every listed tool carries. Usually the same as `slug` (the npm/directory
+ * name), but 14 packs differ -- `hex-pm` is `hex_pm` on the gateway -- and
+ * filtering tools/list on the npm slug would match none of their tools
+ * (fleet #3761). publish-pack.sh stamps it from the gateway manifest.
+ */
+export const GATEWAY_SLUG = (PKG.pipeworx && PKG.pipeworx.gatewaySlug) || SLUG;
+if (typeof GATEWAY_SLUG !== 'string' || !/^[a-z0-9][a-z0-9_-]*$/.test(GATEWAY_SLUG)) {
+  throw new Error(`${PKG.name}: package.json carries an invalid pipeworx.gatewaySlug -- this package was built wrong`);
+}
+export const PACKAGE_NAME = PKG.name;
+export const VERSION = PKG.version;
+
+/** The pack's own tool definitions at publish time (the offline tools/list answer). */
+export const tools = readJson('../tools.json');
+
+const DEFAULT_GATEWAY = 'https://gateway.pipeworx.io';
+const DEFAULT_TIMEOUT_MS = 120_000;
+const SIGNUP_URL = 'https://pipeworx.io/signup';
+const VIA = '(via pipeworx-standalone)';
+
+/** Resolve the bridge's settings. Exported for the tests and for callTool. */
+export function bridgeConfig(env = process.env, overrides = {}) {
+  const base = String(overrides.gatewayUrl || env.PIPEWORX_GATEWAY_URL || DEFAULT_GATEWAY).trim().replace(/\/+$/, '');
+  const apiKey = String(overrides.apiKey ?? env.PIPEWORX_API_KEY ?? '').trim();
+  const t = Number(overrides.timeoutMs ?? env.PIPEWORX_TIMEOUT_MS);
+  return {
+    endpoint: `${base}/${GATEWAY_SLUG}/mcp`,
+    apiKey,
+    timeoutMs: Number.isFinite(t) && t > 0 ? t : DEFAULT_TIMEOUT_MS,
+    metaTools: (overrides.metaTools ?? env.PIPEWORX_META_TOOLS) === '1' || overrides.metaTools === true,
+  };
+}
+
+function requestHeaders(cfg) {
+  const h = {
+    'Content-Type': 'application/json',
+    Accept: 'application/json',
+    // Stable per package version: the gateway remembers a client's name by
+    // identifier + User-Agent (workers/gateway/src/client-identity.ts).
+    'User-Agent': `pipeworx-standalone/${VERSION} (${PACKAGE_NAME})`,
+    // Analytics label only (blob11 = 'standalone'). It never changes tier,
+    // limits or price -- anyone can send it.
+    'X-Pipeworx-Surface': 'standalone',
+  };
+  if (cfg.apiKey) h.Authorization = `Bearer ${cfg.apiKey}`;
+  return h;
+}
+
+/** Parse a gateway body: JSON, or the last JSON `data:` frame of an SSE stream. */
+function parseBody(text, contentType) {
+  if (/text\/event-stream/i.test(contentType || '')) {
+    let last = null;
+    for (const line of text.split(/\r?\n/)) {
+      if (!line.startsWith('data:')) continue;
+      try { last = JSON.parse(line.slice(5).trim()); } catch { /* keep-alive or partial frame */ }
+    }
+    return last;
+  }
+  try { return JSON.parse(text); } catch { return null; }
+}
+
+/**
+ * POST one JSON-RPC message. Never throws: the outcome is one of
+ *   { kind: 'http', status, headers, body, text }   the gateway answered
+ *   { kind: 'network', detail }                      DNS, TLS, refused, reset
+ *   { kind: 'timeout' }                              no answer in cfg.timeoutMs
+ */
+export async function postToGateway(message, cfg) {
+  const ac = new AbortController();
+  const timer = setTimeout(() => ac.abort(), cfg.timeoutMs);
+  try {
+    const res = await fetch(cfg.endpoint, {
+      method: 'POST',
+      headers: requestHeaders(cfg),
+      body: JSON.stringify(message),
+      signal: ac.signal,
+    });
+    const text = await res.text();
+    return { kind: 'http', status: res.status, headers: res.headers, body: parseBody(text, res.headers.get('content-type')), text };
+  } catch (err) {
+    if (ac.signal.aborted || (err && (err.name === 'AbortError' || err.name === 'TimeoutError'))) return { kind: 'timeout' };
+    const cause = err && err.cause;
+    const detail = (cause && (cause.code || cause.message)) || (err && err.message) || String(err);
+    return { kind: 'network', detail };
+  } finally {
+    clearTimeout(timer);
+  }
+}
+
+// ── The key-not-accepted warning (one per process) ──────────────────
+
+let warnedKeyIgnored = false;
+const KEY_IGNORED = 'PIPEWORX_API_KEY was not accepted, calling anonymously.';
+
+/** True when a key was sent but the gateway still served the call as anonymous. */
+function keyIgnored(out, cfg) {
+  return !!cfg.apiKey && out.kind === 'http' && (out.headers.get('x-ratelimit-tier') || '').toLowerCase() === 'anonymous';
+}
+
+function noteTier(out, cfg, warn) {
+  if (!keyIgnored(out, cfg) || warnedKeyIgnored) return;
+  warnedKeyIgnored = true;
+  warn(`${PACKAGE_NAME}: ${KEY_IGNORED} Check the key at ${SIGNUP_URL}.`);
+}
+
+/** Test hook: forget that the warning was printed. */
+export function _resetWarnings() { warnedKeyIgnored = false; }
+
+// ── Results the host shows to the model ─────────────────────────────
+
+function errorResult(text, detail) {
+  const result = { content: [{ type: 'text', text }], isError: true };
+  if (detail) result._meta = { pipeworx_standalone: detail };
+  return result;
+}
+
+const rpcResult = (id, result) => ({ jsonrpc: '2.0', id, result });
+const rpcError = (id, code, message) => ({ jsonrpc: '2.0', id, error: { code, message } });
+
+function firstLine(text) {
+  const line = String(text || '').split(/\r?\n/).map((l) => l.trim()).find(Boolean) || '(empty body)';
+  return line.length > 200 ? `${line.slice(0, 200)}...` : line;
+}
+
+function unreachableText(cfg, out) {
+  if (out.kind === 'timeout') {
+    return `The Pipeworx gateway at ${cfg.endpoint} did not answer within ${Math.round(cfg.timeoutMs / 1000)}s, so this call timed out. `
+      + `${PACKAGE_NAME} forwards every call to the Pipeworx gateway and has no local mode. Try again; a call that keeps timing out is worth reporting.`;
+  }
+  return `Could not reach the Pipeworx gateway at ${cfg.endpoint} (${out.detail}). `
+    + `${PACKAGE_NAME} forwards every call to the Pipeworx gateway and has no local mode, so it needs network access.`;
+}
+
+function isAuthRequired(body) {
+  return !!body && (body.error_code === 'authentication_required'
+    || (body.error && body.error.data && body.error.data.reason === 'authentication_required'));
+}
+
+/** Map a tools/call outcome to the JSON-RPC response the host gets. */
+function toolsCallResponse(id, out, cfg) {
+  if (out.kind !== 'http') return rpcResult(id, errorResult(unreachableText(cfg, out), { reason: out.kind }));
+  const { status, body } = out;
+
+  // Anonymous daily cap: the gateway answers 401 with a JSON-RPC error whose
+  // message is the offer. Hosts often swallow protocol errors, so hand it over
+  // as a tool result the model actually reads.
+  if (status === 401 && isAuthRequired(body)) {
+    const data = (body.error && body.error.data) || {};
+    const parts = [body.error && body.error.message ? body.error.message : 'The anonymous daily allowance is used up.'];
+    if (data.resets_at) parts.push(`The anonymous allowance resets at ${data.resets_at}.`);
+    parts.push(cfg.apiKey
+      ? `${KEY_IGNORED} Check the key, or get a free one at ${SIGNUP_URL}.`
+      : `To keep going now, set PIPEWORX_API_KEY in this MCP server's environment; a free key is at ${SIGNUP_URL}.`);
+    return rpcResult(id, errorResult(parts.join('\n\n'), { status, reason: 'authentication_required', resets_at: data.resets_at ?? null }));
+  }
+
+  // A keyed tier over its cap: today the gateway answers 429 with a RESULT
+  // that has no isError, which reads as a success (fleet #3760). Mark it.
+  if (status === 429 && body && body.result && typeof body.result === 'object') {
+    const result = { ...body.result, isError: true };
+    if (cfg.apiKey && keyIgnored(out, cfg)) {
+      result.content = [...(Array.isArray(result.content) ? result.content : []), { type: 'text', text: KEY_IGNORED }];
+    }
+    return rpcResult(id, result);
+  }
+  if ((status === 401 || status === 429) && body && body.error) {
+    const extra = keyIgnored(out, cfg) ? ` ${KEY_IGNORED}` : '';
+    return rpcResult(id, errorResult(`${body.error.message || `HTTP ${status}`}${extra}`, { status }));
+  }
+
+  // A real JSON-RPC answer (result or protocol error): relay it verbatim,
+  // structuredContent and _meta (cost, tier, provenance) included.
+  if (body && body.jsonrpc === '2.0' && (body.result !== undefined || body.error !== undefined) && status < 500) {
+    return { ...body, id };
+  }
+
+  // 5xx, an HTML edge page, or anything else that is not JSON-RPC.
+  return rpcResult(id, errorResult(`The Pipeworx gateway returned HTTP ${status}: ${firstLine(out.text)}`, { status }));
+}
+
+function localInitialize(params) {
+  return {
+    protocolVersion: (params && params.protocolVersion) || '2025-06-18',
+    capabilities: { tools: {} },
+    serverInfo: { name: PACKAGE_NAME, version: VERSION },
+  };
+}
+
+const scopedInstructions = () =>
+  `${PACKAGE_NAME} forwards to the Pipeworx gateway and lists only the ${SLUG} pack's tools. `
+  + 'Set PIPEWORX_META_TOOLS=1 to also list ask_pipeworx and the other gateway-wide tools.';
+
+/** `<host name> (via pipeworx-standalone)`. The slug stays OUT of the name: the
+ *  gateway's scanner-name check substring-matches words like poll/watch/index. */
+export function bridgedClientName(name) {
+  const n = typeof name === 'string' && name.trim() ? name.trim() : 'unknown';
+  return n.includes(VIA) ? n : `${n} ${VIA}`;
+}
+
+/**
+ * Relay one JSON-RPC message to the gateway and return the response to write
+ * back, or null for a notification. Never throws.
+ *
+ * @param {object} message  a parsed JSON-RPC request or notification
+ * @param {{cfg?: object, warn?: (line: string) => void}} [opts]
+ */
+export async function relay(message, opts = {}) {
+  const cfg = opts.cfg || bridgeConfig();
+  const warn = opts.warn || ((line) => process.stderr.write(`${line}\n`));
+  if (!message || typeof message !== 'object' || message.jsonrpc !== '2.0' || typeof message.method !== 'string') {
+    const id = message && typeof message === 'object' && 'id' in message ? message.id : null;
+    return rpcError(id ?? null, -32600, 'Invalid Request');
+  }
+  const isNotification = !('id' in message) || message.id === undefined;
+  const id = message.id;
+
+  if (isNotification) {
+    const out = await postToGateway(message, cfg);
+    if (out.kind !== 'http') warn(`${PACKAGE_NAME}: notification ${message.method} not delivered: ${unreachableText(cfg, out)}`);
+    return null;
+  }
+
+  if (message.method === 'initialize') {
+    const params = { ...(message.params || {}) };
+    params.clientInfo = { ...(params.clientInfo || {}), name: bridgedClientName(params.clientInfo && params.clientInfo.name) };
+    if (!params.clientInfo.version) params.clientInfo.version = '0';
+    const out = await postToGateway({ ...message, params }, cfg);
+    noteTier(out, cfg, warn);
+    if (out.kind === 'http' && out.body && out.body.result && typeof out.body.result === 'object') {
+      const result = { ...out.body.result, serverInfo: { name: PACKAGE_NAME, version: VERSION } };
+      if (!cfg.metaTools) result.instructions = scopedInstructions();
+      return rpcResult(id, result);
+    }
+    // The host must still start: answer locally and let the calls report the
+    // gateway problem when they happen.
+    warn(`${PACKAGE_NAME}: initialize answered locally -- ${out.kind === 'http' ? `gateway HTTP ${out.status}` : unreachableText(cfg, out)}`);
+    return rpcResult(id, { ...localInitialize(message.params), instructions: scopedInstructions() });
+  }
+
+  if (message.method === 'tools/list') {
+    const out = await postToGateway(message, cfg);
+    noteTier(out, cfg, warn);
+    const listed = out.kind === 'http' && out.body && out.body.result && Array.isArray(out.body.result.tools)
+      ? out.body.result : null;
+    if (listed) {
+      if (cfg.metaTools) return rpcResult(id, listed);
+      const own = listed.tools.filter((t) => t && t._meta && (t._meta.pack === GATEWAY_SLUG || t._meta.pack === SLUG));
+      if (own.length > 0) return rpcResult(id, { ...listed, tools: own });
+      warn(`${PACKAGE_NAME}: the gateway listed no ${SLUG} tools; serving the tool list bundled with this package`);
+    } else {
+      warn(`${PACKAGE_NAME}: tools/list served from the snapshot bundled with this package -- ${out.kind === 'http' ? `gateway HTTP ${out.status}` : unreachableText(cfg, out)}`);
+    }
+    return rpcResult(id, { tools });
+  }
+
+  if (message.method === 'tools/call') {
+    const out = await postToGateway(message, cfg);
+    noteTier(out, cfg, warn);
+    return toolsCallResponse(id, out, cfg);
+  }
+
+  // Everything else (ping, resources/*, prompts/*, ...): relay as-is.
+  const out = await postToGateway(message, cfg);
+  noteTier(out, cfg, warn);
+  if (out.kind === 'http' && out.body && out.body.jsonrpc === '2.0') return { ...out.body, id };
+  if (message.method === 'ping') return rpcResult(id, {});
+  return rpcError(id, -32603, out.kind === 'http'
+    ? `The Pipeworx gateway returned HTTP ${out.status}: ${firstLine(out.text)}`
+    : unreachableText(cfg, out));
+}
+
+/**
+ * Call one of this pack's tools through the gateway -- the `{tools, callTool}`
+ * shape earlier versions of this package exported. Resolves with the tool's
+ * structured result; rejects with the gateway's message on any error.
+ *
+ * @param {string} name
+ * @param {Record<string, unknown>} [args]
+ * @param {{apiKey?: string, gatewayUrl?: string, timeoutMs?: number}} [opts]
+ *        apiKey defaults to process.env.PIPEWORX_API_KEY.
+ */
+export async function callTool(name, args = {}, opts = {}) {
+  const cfg = bridgeConfig(process.env, opts);
+  const res = await relay({ jsonrpc: '2.0', id: 1, method: 'tools/call', params: { name, arguments: args } }, { cfg });
+  if (res.error) throw new Error(res.error.message);
+  const result = res.result || {};
+  const text = Array.isArray(result.content)
+    ? result.content.filter((c) => c && c.type === 'text').map((c) => c.text).join('\n')
+    : '';
+  if (result.isError) throw new Error(text || `${name} failed`);
+  if (result.structuredContent !== undefined) return result.structuredContent;
+  try { return JSON.parse(text); } catch { return text; }
+}
+
+export default { tools, callTool };

package/package.json

@@ -1,32 +1,33 @@
 {
   "name": "@pipeworx/mcp-mesh",
-  "version": "0.1.3",
+  "version": "0.2.0",
   "description": "NLM MeSH (Medical Subject Headings) MCP.",
   "type": "module",
-  "main": "src/index.ts",
-  "types": "src/index.ts",
+  "main": "lib/index.js",
+  "exports": {
+    ".": "./lib/index.js",
+    "./tools.json": "./tools.json",
+    "./package.json": "./package.json"
+  },
   "bin": {
     "mcp-mesh": "bin/cli.js"
   },
+  "files": ["bin/", "lib/", "tools.json", "server.json"],
+  "engines": {
+    "node": ">=18"
+  },
   "keywords": ["mcp", "mcp-server", "model-context-protocol", "pipeworx", "mesh"],
   "license": "MIT",
   "repository": {
     "type": "git",
     "url": "git+https://github.com/pipeworx-io/mcp-mesh.git"
   },
-  "scripts": {
-    "typecheck": "tsc --noEmit"
-  },
-  "dependencies": {
-    "@modelcontextprotocol/sdk": "^1.30.0",
-    "tsx": "^4.19.0"
-  },
-  "devDependencies": {
-    "typescript": "^5.9.3",
-    "@cloudflare/workers-types": "^4.20260405.1"
-  },
+  "mcpName": "io.github.pipeworx-io/mesh",
   "pipeworx": {
-    "sourceHash": "v1-500d58d70060a8a8a0a61d999a7ed6106cb519673959c0082be45003636ae92a",
-    "sourceCommit": "ba9dd6df5992aeb16ef2425ee86d1752c34ca636"
+    "mode": "gateway",
+    "slug": "mesh",
+    "gatewaySlug": "mesh",
+    "sourceHash": "v1-2648a9e3620ed69cdc93925841c4d476427fad64345ecf76220ac16c40aa949f",
+    "sourceCommit": "5c89d6abb778d45da5d92002eb251978622bedf9"
   }
 }

package/server.json

@@ -3,7 +3,7 @@
   "name": "io.github.pipeworx-io/mesh",
   "title": "Mesh",
   "description": "NLM MeSH (Medical Subject Headings) MCP.",
-  "version": "0.1.3",
+  "version": "0.2.0",
   "websiteUrl": "https://pipeworx.io/packs/mesh",
   "repository": {
     "url": "https://github.com/pipeworx-io/mcp-mesh",

package/tools.json

@@ -0,0 +1,62 @@
+[
+  {
+    "name": "search_descriptors",
+    "description": "Search NLM MeSH descriptors by a disease/drug/concept term (e.g. \"diabetes\", \"aspirin\", \"myocardial infarction\"). Returns the matching MeSH descriptor IDs (Dxxxxxxx) — the controlled-vocabulary headings used to index PubMed. The core free-text-to-MeSH lookup. Keyless.",
+    "inputSchema": {
+      "type": "object",
+      "properties": {
+        "text": {
+          "type": "string",
+          "description": "A disease, drug, or biomedical concept term, e.g. \"diabetes\", \"aspirin\", \"myocardial infarction\"."
+        },
+        "match": {
+          "type": "string",
+          "description": "Match mode against descriptor labels: \"exact\", \"contains\", or \"startswith\". Default \"contains\"."
+        },
+        "limit": {
+          "type": "number",
+          "description": "Max results (default 10, max 25)."
+        }
+      },
+      "required": [
+        "text"
+      ]
+    }
+  },
+  {
+    "name": "get_descriptor",
+    "description": "Get full detail for a MeSH descriptor by its ID (e.g. \"D003920\" = Diabetes Mellitus): its preferred label, entry terms (synonyms MeSH indexes under it), allowable qualifiers (subheadings like \"drug therapy\", \"epidemiology\"), and related see-also headings. Keyless.",
+    "inputSchema": {
+      "type": "object",
+      "properties": {
+        "mesh_id": {
+          "type": "string",
+          "description": "A MeSH descriptor ID, e.g. \"D003920\" (Diabetes Mellitus) or \"D001241\" (Aspirin)."
+        }
+      },
+      "required": [
+        "mesh_id"
+      ]
+    }
+  },
+  {
+    "name": "resolve_term",
+    "description": "Map a free-text term or everyday synonym to its canonical MeSH descriptor(s) — the preferred heading to use when searching PubMed. Tries an exact descriptor match first; if none, falls back to a fuzzy contains match (flagged fuzzy). Keyless.",
+    "inputSchema": {
+      "type": "object",
+      "properties": {
+        "text": {
+          "type": "string",
+          "description": "A term or synonym to canonicalize, e.g. \"aspirin\", \"high blood pressure\", \"diabetes\"."
+        },
+        "limit": {
+          "type": "number",
+          "description": "Max matches (default 10, max 25)."
+        }
+      },
+      "required": [
+        "text"
+      ]
+    }
+  }
+]