@pikaa-ai/pikaa 0.2.5 → 0.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (2430) hide show
  1. package/LICENSE +21 -0
  2. package/README.md +153 -104
  3. package/assets/frames/blocks/frame_1.txt +17 -0
  4. package/assets/frames/blocks/frame_10.txt +17 -0
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  2367. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  2368. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  2369. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  2370. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  2371. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  2372. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  2373. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  2374. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  2375. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  2376. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  2377. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  2378. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  2379. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  2380. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  2381. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  2382. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  2383. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  2384. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  2385. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  2386. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  2387. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  2388. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  2389. package/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  2390. package/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  2391. package/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  2392. package/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  2393. package/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  2394. package/skills/xlsx/scripts/office/schemas/mce/mc.xsd +75 -0
  2395. package/skills/xlsx/scripts/office/schemas/microsoft/wml-2010.xsd +560 -0
  2396. package/skills/xlsx/scripts/office/schemas/microsoft/wml-2012.xsd +67 -0
  2397. package/skills/xlsx/scripts/office/schemas/microsoft/wml-2018.xsd +14 -0
  2398. package/skills/xlsx/scripts/office/schemas/microsoft/wml-cex-2018.xsd +20 -0
  2399. package/skills/xlsx/scripts/office/schemas/microsoft/wml-cid-2016.xsd +13 -0
  2400. package/skills/xlsx/scripts/office/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  2401. package/skills/xlsx/scripts/office/schemas/microsoft/wml-symex-2015.xsd +8 -0
  2402. package/skills/xlsx/scripts/office/soffice.py +232 -0
  2403. package/skills/xlsx/scripts/office/validate.py +173 -0
  2404. package/skills/xlsx/scripts/office/validators/__init__.py +15 -0
  2405. package/skills/xlsx/scripts/office/validators/base.py +875 -0
  2406. package/skills/xlsx/scripts/office/validators/docx.py +466 -0
  2407. package/skills/xlsx/scripts/office/validators/pptx.py +441 -0
  2408. package/skills/xlsx/scripts/office/validators/redlining.py +299 -0
  2409. package/skills/xlsx/scripts/recalc.py +308 -0
  2410. package/skills/zarr-python/SKILL.md +241 -0
  2411. package/skills/zarr-python/references/api_reference.md +162 -0
  2412. package/skills/zarr-python/references/chunking_and_compression.md +138 -0
  2413. package/skills/zarr-python/references/integration.md +147 -0
  2414. package/skills/zarr-python/references/performance_and_patterns.md +198 -0
  2415. package/skills/zarr-python/references/storage_backends.md +91 -0
  2416. package/skills/zarr-python/references/v3_migration.md +127 -0
  2417. package/templates/agents/orchestrator.md +37 -0
  2418. package/templates/base/groupy_prompt.md +92 -0
  2419. package/templates/compact/prompt.md +9 -0
  2420. package/templates/compact/summary_prefix.md +1 -0
  2421. package/templates/modes/default.md +19 -0
  2422. package/templates/modes/plan.md +128 -0
  2423. package/templates/modes/review.md +60 -0
  2424. package/templates/permissions/approval_policy/never.md +1 -0
  2425. package/templates/permissions/approval_policy/on_request.md +23 -0
  2426. package/templates/permissions/sandbox_mode/danger_full_access.md +1 -0
  2427. package/templates/permissions/sandbox_mode/read_only.md +1 -0
  2428. package/templates/permissions/sandbox_mode/workspace_write.md +1 -0
  2429. package/templates/personalities/friendly.md +19 -0
  2430. package/templates/personalities/pragmatic.md +17 -0
@@ -0,0 +1,346 @@
1
+ # Fail-Closed Evidence Review
2
+
3
+ Research basis: **2026-07-23**, extended **2026-07-26** for laboratory lanes. This
4
+ checklist organizes evidence questions; it is not ISO or IEC text, an audit, an
5
+ assessment, a legal determination, or a compliance score.
6
+
7
+ Sections up to "Training, competence, and change control" apply to the device QMS lanes
8
+ (`iso-13485`, `iso-14971`). The laboratory sections near the end apply to `iso-17025`
9
+ and `iso-15189`. Use the sections your declared profile covers; do not report on a
10
+ domain you did not sample.
11
+
12
+ ## Status vocabulary
13
+
14
+ Use only:
15
+
16
+ - `not-assessed` — no authorized decision was recorded;
17
+ - `evidence-missing` — applicable/expected evidence was not supplied;
18
+ - `evidence-incomplete` — evidence is draft, unapproved, unsourced, stale, or
19
+ insufficiently linked;
20
+ - `evidence-present-for-human-review` — controlled evidence is available for
21
+ substantive review; no adequacy claim;
22
+ - `not-applicable-approved` — an authorized person approved a documented rationale.
23
+
24
+ Never convert these states into a “compliance percentage.” Unequal, conditional,
25
+ product-specific, and jurisdiction-specific evidence cannot be responsibly reduced
26
+ to keyword counts.
27
+
28
+ ## Required fields for every review item
29
+
30
+ | Field | Required content |
31
+ |---|---|
32
+ | Item ID | Stable unique identifier |
33
+ | Scope | Products, sites, processes, suppliers, systems, and period |
34
+ | Owner | Accountable role |
35
+ | Status | One value from the vocabulary above |
36
+ | Evidence | Controlled IDs, revisions/dates, and locations |
37
+ | Source/version | Official source, exact edition/version/date, access/currency review |
38
+ | Rationale | Evidence-based conclusion or approved not-applicable rationale |
39
+ | Action | Gap/change/CAPA ID, owner, due date, and status |
40
+ | Approval | Named authorized approver, decision, date, and record ID |
41
+
42
+ Blank, placeholder, inaccessible, stale, or unapproved fields fail closed.
43
+
44
+ ## Workflow
45
+
46
+ 1. Freeze the review purpose and boundaries: internal audit, ISO certification
47
+ preparation, laboratory accreditation assessment preparation, FDA inspection
48
+ preparation, national regulatory inspection preparation, MDSAP, or EU conformity
49
+ assessment. One purpose per review.
50
+ 2. Obtain authorized standards and current official regulatory sources.
51
+ 3. Record product/site/market/activity scope; route applicability decisions to
52
+ authorized management, RA/QA, and legal roles.
53
+ 4. Build a controlled evidence manifest. Do not classify files from names alone.
54
+ 5. Sample implementation records across time, products, sites, shifts, suppliers,
55
+ and risk as justified.
56
+ 6. Trace findings to risk, correction, CAPA, change, validation, training, and
57
+ management review.
58
+ 7. Preserve limitations and unresolved decisions in the report.
59
+ 8. Obtain human approval. Do not issue a certification/readiness/compliance claim.
60
+
61
+ ## Scope, roles, and source basis
62
+
63
+ - [ ] Legal entities, sites, products/families, lifecycle activities, outsourced
64
+ processes, and markets considered are explicit.
65
+ - [ ] Authorized management representative, RA/QA owner, process owners, document/
66
+ record owners, delegates, and escalation are documented.
67
+ - [ ] Independence and authority for audit, release, complaint/reportability,
68
+ nonconformity disposition, CAPA closure, and change approval are defined.
69
+ - [ ] Each applicability or not-applicable decision cites current official
70
+ source/version evidence and authorized approval.
71
+ - [ ] ISO, FDA, MDSAP, EU, and product-specific criteria are separately identified.
72
+ - [ ] External-source currency reviews and change-impact records are current.
73
+
74
+ ## Document and record control
75
+
76
+ - [ ] Every controlled document has ID, title, revision, owner, status, approval,
77
+ effective date, change rationale, controlled location, and training impact.
78
+ - [ ] Point-of-use control prevents unintended use of draft or obsolete documents.
79
+ - [ ] External standards, regulations, guidance, specifications, and customer/
80
+ supplier documents have exact versions and currency-review ownership.
81
+ - [ ] Record creation, attribution, correction, integrity, security, audit trail,
82
+ backup/recovery, retrieval, retention, legal hold, and disposition are controlled.
83
+ - [ ] Each retention period has an approved source/version and start-event rationale.
84
+ - [ ] Electronic systems and migrations preserve integrity and retrievability.
85
+ - [ ] Document changes link to affected risk, design, supplier, production,
86
+ validation/software, postmarket, and training evidence.
87
+
88
+ ## Risk management
89
+
90
+ - [ ] Product and process risk scope, responsibilities, methods, criteria, reviews,
91
+ and records are approved.
92
+ - [ ] Intended use, reasonably foreseeable use, hazards/signals, evaluations,
93
+ controls, verification, residual-risk decisions, and production/postmarket
94
+ feedback are traceable.
95
+ - [ ] Risk controls link to design inputs/outputs, verification/validation,
96
+ production controls, labeling/information, and acceptance evidence.
97
+ - [ ] Supplier, software, process, usability, cybersecurity, clinical/performance,
98
+ and postmarket risks are considered where applicable.
99
+ - [ ] Complaints, trends, vigilance, CAPA, and changes update risk evidence.
100
+ - [ ] ISO 14971 and any EN A11 source are identified by exact edition and role.
101
+
102
+ ## Design and development
103
+
104
+ - [ ] Authorized applicability decision covers the actual legal/lifecycle role.
105
+ - [ ] Plans define stages, responsibilities, interfaces, reviews, resources,
106
+ verification, validation, transfer, and change controls.
107
+ - [ ] Inputs are approved, testable, traceable, and linked to risk and
108
+ product/regulatory requirements.
109
+ - [ ] Outputs support production, suppliers, acceptance, service, labeling, and safe
110
+ use as applicable.
111
+ - [ ] Reviews preserve participants, independence/competence, issues, decisions, and
112
+ follow-up evidence.
113
+ - [ ] Verification and validation have approved protocols, objective criteria,
114
+ representative configurations/samples, deviations, results, and approvals.
115
+ - [ ] Transfer and design changes include risk, validation, production, supplier,
116
+ software, training, product-file, and postmarket impact evidence.
117
+
118
+ ## Supplier and outsourced-process controls
119
+
120
+ - [ ] Supplier/product/process criticality has an approved risk basis.
121
+ - [ ] Selection, qualification, approval, and scope are evidenced.
122
+ - [ ] Purchasing information defines requirements, acceptance, records, change
123
+ notification, and sub-tier flow-down as applicable.
124
+ - [ ] Incoming/acceptance verification is risk-based and linked to supplier
125
+ performance.
126
+ - [ ] Quality agreements assign responsibilities for critical/outsourced processes.
127
+ - [ ] Monitoring, re-evaluation, audits, nonconformity, SCAR/CAPA, effectiveness,
128
+ escalation, and disqualification are controlled.
129
+ - [ ] Supplier changes route through product/process risk, validation, and change
130
+ control before acceptance.
131
+
132
+ ## Production, service, validation, and software
133
+
134
+ - [ ] Infrastructure, maintenance, environment, contamination/cleanliness,
135
+ personnel, instructions, and process parameters are controlled as applicable.
136
+ - [ ] Materials/components, equipment, software, methods, labeling/packaging,
137
+ acceptance, release, preservation, distribution, installation, and service
138
+ records are traceable.
139
+ - [ ] Processes whose output needs validation have approved protocols, acceptance
140
+ criteria, qualified resources, deviations, results, revalidation triggers, and
141
+ change approval.
142
+ - [ ] Monitoring/measurement equipment has identification, status, traceability,
143
+ calibration/verification, maintenance, out-of-tolerance impact, and records.
144
+ - [ ] QMS and production software has intended use, risk, requirements,
145
+ configuration, access/data-integrity controls, validation, release, incident,
146
+ backup/recovery, supplier, and change/revalidation evidence.
147
+ - [ ] Product release is performed by authorized personnel against approved criteria.
148
+
149
+ ## Identification and traceability
150
+
151
+ - [ ] Approved scope defines the needed extent for each product and jurisdiction.
152
+ - [ ] Material/component, lot/serial/UDI, process, acceptance/release, distribution,
153
+ installation, and service evidence is linked as applicable.
154
+ - [ ] Traceability supports complaint, investigation, correction/removal, vigilance,
155
+ field action, and CAPA decisions.
156
+ - [ ] Record retention and retrieval preserve traceability for the approved period.
157
+
158
+ ## Complaints, feedback, postmarket, and vigilance
159
+
160
+ - [ ] Intake captures source, device, event, dates, reporter, and potential safety/
161
+ performance issue without losing original information.
162
+ - [ ] Evaluation and investigation have owners, rationale, evidence, product/risk
163
+ impact, and approved conclusions.
164
+ - [ ] Authorized roles make jurisdiction-specific reportability/vigilance and field-
165
+ action decisions within controlled workflows.
166
+ - [ ] Trends and postmarket plans/reports use defined data sources, methods, review
167
+ intervals, thresholds, limitations, and actions.
168
+ - [ ] Feedback links to risk, design, suppliers, production, labeling, validation,
169
+ CAPA, and management review.
170
+ - [ ] MDR/IVDR work considers current MDCG PMS/vigilance guidance as nonbinding
171
+ guidance with exact document/revision/date.
172
+
173
+ ## Nonconformity and CAPA
174
+
175
+ - [ ] Nonconforming outputs are identified, controlled, evaluated, segregated where
176
+ appropriate, dispositioned by authorized roles, and reverified after rework.
177
+ - [ ] Correction/containment, concession, post-delivery action, regulatory review,
178
+ and affected-party communication are evidenced.
179
+ - [ ] CAPA intake defines source, factual problem, scope, risk/reportability review,
180
+ and decision rationale.
181
+ - [ ] Investigation evidence supports the root cause or justified conclusion and
182
+ systemic-extent review.
183
+ - [ ] Actions address the supported cause/risk and link to change, validation,
184
+ training, supplier, product, and postmarket controls.
185
+ - [ ] Effectiveness plans define objective criteria, baseline, sample/window, timing,
186
+ independent reviewer, evidence, and approval.
187
+ - [ ] Pending, insufficient, or ineffective evidence blocks closure.
188
+
189
+ ## Internal audit and management review
190
+
191
+ - [ ] Audit program is risk-based and covers applicable processes, sites, products,
192
+ shifts/time, prior findings, and changes over a justified cycle.
193
+ - [ ] Audit plans define criteria, scope, sampling, methods, competence, and
194
+ independence.
195
+ - [ ] Reports separate evidence, findings, corrections, CAPA decisions, owners,
196
+ dates, and effectiveness follow-up.
197
+ - [ ] Management review inputs are controlled and complete for the approved agenda.
198
+ - [ ] Outputs record decisions, resources, changes, actions, owners, due dates, and
199
+ follow-up.
200
+ - [ ] FDA inspection preparation accounts for current access to management, internal-
201
+ audit, and supplier-audit records under QMSR.
202
+
203
+ ## Training, competence, and change control
204
+
205
+ - [ ] Roles have competence criteria and objective evidence of education, training,
206
+ skills, experience, and authorization.
207
+ - [ ] Training is completed and effectiveness assessed before independent work or
208
+ document effective use, as risk justifies.
209
+ - [ ] Changes identify source/version, reason, affected scope, risk, product,
210
+ validation/software, supplier, production, document/record, training,
211
+ postmarket, and regulatory/certification impacts.
212
+ - [ ] Changes have implementation plans, approvals, rollback/contingency where
213
+ needed, verification, and closure evidence.
214
+
215
+ ## Current QMSR transition evidence
216
+
217
+ As of this research date, QMSR is effective and FDA uses Compliance Program
218
+ 7382.850. Review:
219
+
220
+ - [ ] current eCFR and incorporated-edition source basis;
221
+ - [ ] FDA supplemental provisions and linked current regulations;
222
+ - [ ] disposition of obsolete QSR/QSIT references;
223
+ - [ ] pre-2026-02-02 QMS record evidence;
224
+ - [ ] inspection-accessible management, quality-audit, and supplier-audit records;
225
+ - [ ] complaint/servicing records and labeling/packaging controls;
226
+ - [ ] updated inspection-process training;
227
+ - [ ] supplier, software-validation, and change-control evidence; and
228
+ - [ ] removal of claims that ISO certification establishes FDA compliance or an
229
+ inspection exemption.
230
+
231
+ Use `scripts/check_qmsr_transition.py`; do not create a legacy-QSR clause map as the
232
+ current control framework.
233
+
234
+ ## Laboratory scope, impartiality, and competence (`iso-17025`, `iso-15189`)
235
+
236
+ - [ ] Declared scope of laboratory activities is recorded per location, per method or
237
+ examination, with the measurand or property and the range or sample type.
238
+ - [ ] Declared scope is reconciled against the current accredited scope schedule, and
239
+ any work outside it is identified with its claim controls.
240
+ - [ ] Accreditation symbols, endorsement wording, and recognition-arrangement phrasing
241
+ are current, authorized, and used only within scope.
242
+ - [ ] Impartiality risks are identified with controls, review evidence, and an owner —
243
+ not a bare policy statement.
244
+ - [ ] Authorized signatories are listed with the scope each covers and the competence
245
+ evidence behind the authorization.
246
+ - [ ] Personnel competence is evidenced per activity: training, authorization,
247
+ ongoing monitoring, and reauthorization after change.
248
+ - [ ] Facilities and environmental conditions that affect results are monitored, with
249
+ records and action on excursions.
250
+ - [ ] Equipment records cover calibration status, intermediate checks, out-of-service
251
+ handling, and the effect of any failure on previously reported results.
252
+
253
+ ## Metrological traceability, uncertainty, and decision rules (`iso-17025`, `iso-15189`)
254
+
255
+ - [ ] Traceability is documented as a chain per measurement: stated reference, provider
256
+ and its accreditation scope, certificate identity, uncertainty carried forward,
257
+ interval justification, and intermediate checks.
258
+ - [ ] Where no reference system exists for a measurand, that fact and the alternative
259
+ comparability approach are recorded and authorized.
260
+ - [ ] Measurement uncertainty is evaluated for the measurands that require it, with a
261
+ stated basis, contributions, and controlled revision.
262
+ - [ ] Reported uncertainty and its relationship to the decision rule are consistent
263
+ with the report wording.
264
+ - [ ] Where conformity is stated, the decision rule is documented, agreed where
265
+ required, and applied consistently at the specification limit.
266
+ - [ ] The policy basis for traceability and decision rules is cited by current
267
+ designation and issue, confirmed rather than assumed.
268
+
269
+ ## Methods, validity of results, and reporting (`iso-17025`, `iso-15189`)
270
+
271
+ - [ ] Each scope item is classified: standard method as published, standard method
272
+ requiring verification, modified method, or laboratory-developed method — with
273
+ the evidence that classification demands.
274
+ - [ ] Verification or validation records show performance characteristics evaluated,
275
+ acceptance criteria, data, and authorized approval to put into service.
276
+ - [ ] Methods are revisited after instrument, reagent, personnel, or issue changes.
277
+ - [ ] Proficiency-testing or external-quality-assessment enrolment covers the scope
278
+ items it should, with a documented plan and frequency.
279
+ - [ ] Every questionable or unsatisfactory PT/EQA result has an investigation, an
280
+ action, and effectiveness evidence. **Treat an uninvestigated unsatisfactory
281
+ result as a blocker.**
282
+ - [ ] Where no scheme exists, the alternative comparison approach is recorded and
283
+ authorized.
284
+ - [ ] Technical records are sufficient to reproduce the reported result, with
285
+ identifiable personnel, dates, and revisions.
286
+ - [ ] Report and certificate content, amendment and retraction handling, and
287
+ authorized signature are controlled.
288
+ - [ ] Nonconforming work has documented evaluation, action, customer notification where
289
+ required, and recall or amendment of affected results.
290
+
291
+ ## Medical laboratory pre- and post-examination (`iso-15189`)
292
+
293
+ - [ ] Request content, patient identification, and primary sample identification
294
+ controls are evidenced by records, including identification-error events and their
295
+ investigations.
296
+ - [ ] Collection, transport, stability, acceptance, and rejection criteria are recorded,
297
+ with rejection and transport-excursion records sampled.
298
+ - [ ] Result review and authorization before release is evidenced per examination.
299
+ - [ ] Biological reference intervals and clinical decision limits have a documented
300
+ basis for the population served, not only a package-insert citation.
301
+ - [ ] Critical-result notification records exist, with recipient, time, read-back, and
302
+ timeliness against the defined requirement.
303
+ - [ ] Interpretive comments are made only by authorized persons, per a controlled basis.
304
+ - [ ] Point-of-care testing under the laboratory's responsibility has governance,
305
+ operator authorization, QC, connectivity, and reconciliation evidence.
306
+ - [ ] Laboratory information management covers data integrity, access control, change
307
+ control, validation of the system and of interfaces, and downtime handling.
308
+ - [ ] Continuity and emergency arrangements have been exercised, with records — not a
309
+ plan nobody has tested.
310
+ - [ ] CLIA, licensure, and payer evidence is kept in a separate register, with no
311
+ implication that ISO 15189 accreditation satisfies any of them.
312
+
313
+ ## Regime handoff
314
+
315
+ Before final review, state which authorized party owns the next decision:
316
+
317
+ - ISO certification body for certification audit/certificate decisions;
318
+ - the accreditation body and its assessors for accreditation and scope decisions;
319
+ - CMS, the CMS-approved accreditation organization, or the state agency for CLIA
320
+ certification, deemed status, and licensure decisions;
321
+ - FDA for inspection and enforcement decisions;
322
+ - MDSAP-recognized Auditing Organization and participating authorities for MDSAP;
323
+ - designated MDR/IVDR notified body and competent authorities for applicable EU
324
+ conformity-assessment/regulatory decisions;
325
+ - authorized management, RA/QA, legal, and product specialists for organizational
326
+ decisions.
327
+
328
+ ## Deterministic tooling
329
+
330
+ - `validate_scope_intake.py` — accountable scope/applicability decisions (`--standard`)
331
+ - `audit_document_records.py` — document, record, retention, and source register
332
+ - `check_capa.py` — CAPA/effectiveness closure gates
333
+ - `check_traceability.py` — risk/design/production/postmarket links; device lanes only,
334
+ and **not** metrological traceability
335
+ - `check_qmsr_transition.py` — current post-effective-date QMSR evidence; US device lane
336
+ - `validate_evidence_manifest.py` — bounded local readiness manifest (`--standard`)
337
+ - `check_supplier_controls.py` — risk-based supplier and external-provider evidence
338
+ - `gap_analyzer.py` — domain coverage without keyword or percentage scoring
339
+ (`--standard`)
340
+
341
+ Pass `--standard iso-13485|iso-14971|iso-17025|iso-15189` to the three profile-aware
342
+ checks so the domain vocabulary matches the standard under review. An unlisted value is
343
+ refused rather than defaulted.
344
+
345
+ All tools are local JSON/Markdown structural checks. Exit 0 means only that no
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+ structural finding was generated for the supplied data.
@@ -0,0 +1,236 @@
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+ # ISO 13485 Process Framework (No Standard Text)
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+
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+ Research basis: **2026-07-23**. This reference summarizes a preparation process and
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+ evidence architecture. It does not reproduce ISO requirements and is not a substitute
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+ for the standard.
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+
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+ ## Copyright and authorized access
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+
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+ ISO publications are copyrighted. Obtain ISO 13485 and related standards from
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+ [ISO](https://www.iso.org/standard/59752.html), an ISO national member, or another
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+ authorized source. ISO states that unauthorized copying, scanning, or distribution is
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+ prohibited; see [ISO copyright](https://www.iso.org/copyright.html). Do not ask an
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+ agent to retrieve, transcribe, summarize clause-by-clause, or store proprietary text.
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+
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+ For the U.S. QMSR incorporation by reference, FDA identifies read-only access through
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+ the ANSI IBR portal in its
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+ [QMSR FAQ](https://www.fda.gov/medical-devices/quality-management-system-regulation-qmsr/quality-management-system-regulation-frequently-asked-questions).
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+ That access does not remove copyright or permit copying.
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+
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+ ## Current edition and the 2021 European amendment
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+
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+ - [ISO 13485:2016](https://www.iso.org/standard/59752.html) is Edition 3,
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+ published March 2016. ISO completed its 2025 systematic review and confirmed the
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+ edition on 2025-10-31; it remains current as of this research date.
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+ - Do not call **EN ISO 13485:2016/A11:2021** an ISO international Amendment 1.
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+ It is a European amendment to the EN adoption. The current EU harmonised-standards
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+ lists include EN ISO 13485:2016, AC:2018, and A11:2021. Verify the current OJEU
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+ citation on the Commission's
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+ [harmonised standards page](https://health.ec.europa.eu/medical-devices-topics-interest/harmonised-standards_en).
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+ - FDA incorporated ISO 13485:2016(E), Third edition, March 1, 2016. A later ISO or
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+ EN publication does not silently change the edition incorporated in Part 820.
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+
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+ Record exact publisher, title, edition, amendment/corrigendum, authorized location,
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+ access date, source owner, currency-review date, impact decision, and approval.
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+
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+ ## Hard boundary
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+
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+ This skill and its files cannot:
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+
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+ - certify a QMS or issue/validate a certificate;
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+ - determine legal or regulatory applicability, device classification, reportability,
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+ conformity route, market access, or product authorization;
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+ - replace the authorized management representative, top management, RA/QA, legal
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+ counsel, competent/regulatory authority, notified body, MDSAP Auditing
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+ Organization, accreditation body, or certification body;
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+ - infer effective implementation from a document title, keyword, template, checklist,
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+ or script result; or
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+ - claim compliance, conformity, certification, or inspection readiness.
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+
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+ Use outputs as a list of evidence questions for accountable human review.
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+
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+ ## Keep the assurance regimes separate
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+
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+ `references/assurance-lanes.md` holds the full lane table across every standard in this
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+ skill, including how certification differs from laboratory accreditation. The
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+ device-specific detail follows here.
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+
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+ ### ISO 13485 management-system certification
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+
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+ A certification body audits the defined QMS scope against the authorized standard and
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+ its certification scheme. The certificate is limited to its stated organization, sites,
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+ activities, products/technical areas, standard edition, and validity. Certification is
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+ not FDA approval, an FDA inspection exemption, an MDSAP audit, an EU device
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+ certificate, or a legal-applicability decision.
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+
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+ For accredited ISO 13485 certification, verify the certification body's accreditation
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+ scope. As of 2026, Global Accreditation Cooperation Incorporated has replaced IAF
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+ and ILAC operationally. Its document library carries IAF MD 8:2023 and IAF MD
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+ 9:2023 while successor documents are developed. These documents concern
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+ accreditation and certification-body practice, not product authorization.
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+
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+ ### FDA QMSR inspection and compliance
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+
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+ The [QMSR](https://www.fda.gov/medical-devices/postmarket-requirements-devices/quality-management-system-regulation-qmsr)
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+ became effective **2026-02-02** and FDA began enforcement on that date. The current
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+ [21 CFR Part 820](https://www.ecfr.gov/current/title-21/chapter-I/subchapter-H/part-820)
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+ is titled *Quality Management System Regulation*. It incorporates ISO 13485:2016
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+ and contains FDA scope, definitions, incorporation, QMS, record, and
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+ labeling/packaging provisions. Other applicable FDA requirements still matter.
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+
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+ On 2026-02-02 FDA stopped using QSIT and began the inspection process in
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+ [Compliance Program 7382.850](https://www.fda.gov/media/80195/download?attachment).
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+ This is now a post-effective-date implementation state, not a future transition.
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+ FDA may inspect QMS records created before the effective date and records that had
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+ previously been exempt from routine review under the old regulation, as explained in
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+ the QMSR FAQ.
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+
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+ Do not use the former 21 CFR 820 section structure as a current requirements map.
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+ Inventory legacy QSR/QSIT references, disposition them under change control, and use
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+ the current eCFR, incorporated edition, and linked current FDA regulations.
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+
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+ ### MDSAP regulatory audit
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+
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+ MDSAP is a regulatory audit conducted by an MDSAP-recognized Auditing
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+ Organization for participating jurisdictions. The current official
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+ [MDSAP Audit Approach](https://www.mdsap.global/documents/library/audit-approach)
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+ is **MDSAP AU P0002.010**, version date **2026-02-02**. It uses a process-based
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+ approach and includes jurisdiction-specific requirements.
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+
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+ An ISO certificate alone is not an MDSAP audit. FDA inspections under QMSR do not
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+ follow the MDSAP audit plan, and FDA does not issue ISO 13485 certificates. MDSAP
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+ participation does not eliminate every possible regulatory inspection or
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+ product-specific obligation.
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+
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+ ### EU MDR/IVDR conformity assessment
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+
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+ The MDR and IVDR impose legal obligations beyond a generic QMS. Use the current
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+ consolidated regulation and current, product-specific conformity route:
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+
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+ - [Regulation (EU) 2017/745 (MDR)](https://eur-lex.europa.eu/eli/reg/2017/745/2026-01-01/eng)
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+ — consolidated version dated 2026-01-01 as of this research.
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+ - [Regulation (EU) 2017/746 (IVDR)](https://eur-lex.europa.eu/eli/reg/2017/746/2025-01-10/eng)
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+ — current consolidated version dated 2025-01-10 as of this research.
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+ - [MDCG guidance index](https://health.ec.europa.eu/medical-devices-sector/new-regulations/guidance-mdcg-endorsed-documents-and-other-guidance_en)
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+ — guidance is not legally binding and is versioned/revised.
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+
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+ Notified bodies are designated by Member States for specified legislation,
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+ conformity-assessment tasks, and designation codes. Verify current scope in
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+ [NANDO](https://webgate.ec.europa.eu/single-market-compliance-space/notified-bodies).
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+ Accreditation or ISO certification does not by itself confer notified-body designation
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+ or establish EU product conformity.
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+
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+ ### Product- and market-specific requirements
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+
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+ Product classification, intended purpose, claims, software, cybersecurity, clinical or
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+ performance evidence, biocompatibility, electrical safety, sterilization, UDI,
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+ registration, reporting, and other controls depend on the device and jurisdiction.
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+ Manage these in a separately approved applicability matrix. Never assume this
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+ framework is complete for a product.
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+
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+ ## QMS evidence domains
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+
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+ The domains below are workflow topics, not clause text. An authorized standard copy
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+ and jurisdiction-specific sources remain the audit criteria.
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+
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+ ### Scope, governance, and roles
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+
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+ Evidence should identify legal entities, sites, products/families, lifecycle activities,
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+ outsourced processes, markets considered, interfaces, top-management authority,
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+ management representative, RA/QA ownership, delegates, independence, and
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+ escalation. Every applicability or not-applicable decision needs a named owner,
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+ rationale, source/version, evidence, date, and approval.
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+
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+ ### Document and record control
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+
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+ Control authoring, review, approval, effective use, distribution, revision,
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+ obsolescence, external sources, retention, integrity, security, retrieval, correction,
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+ audit trails, backup/recovery, and disposition. Preserve source/version evidence and
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+ license restrictions. Link changes to training and validation before effective use.
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+
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+ ### Risk management
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+
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+ Integrate product and process risk with intended use, design, suppliers, production,
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+ software, validation, complaints, postmarket data, CAPA, and change control.
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+ [ISO 14971:2019](https://www.iso.org/standard/72704.html), Edition 3, was confirmed
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+ in 2025. For EU work, distinguish EN ISO 14971:2019/A11:2021; the A11 amendment is
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+ European and does not replace a product-specific legal analysis.
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+
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+ ### Design and development
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+
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+ Maintain approved planning, responsibilities, inputs, outputs, review, verification,
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+ validation, transfer, changes, and traceability. Evidence should show that risk
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+ controls and postmarket learning feed the design/change system. A claimed
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+ not-applicable design process requires authorized scope and regulatory review.
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+
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+ ### Suppliers and outsourced processes
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+
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+ Use risk-based selection, evaluation, controls, purchasing information, acceptance,
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+ change notification, sub-tier flow-down, monitoring, re-evaluation,
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+ nonconformity/CAPA, and business-continuity evidence. Outsourcing does not transfer
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+ the organization's accountability for its controlled process.
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+
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+ ### Production, service, and validation
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+
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+ Define infrastructure, work environment, contamination/cleanliness where relevant,
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+ controlled instructions, acceptance/release, labeling/packaging, preservation,
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+ installation, servicing, process validation, monitoring/measurement equipment, and
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+ change/revalidation triggers. Evidence must be product/process-specific.
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+
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+ ### Software used in the QMS or production
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+
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+ Record intended use, risk, requirements, configuration, access, data integrity,
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+ verification/validation, acceptance, release, incident handling, backup/recovery,
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+ supplier controls, and change/revalidation. A software inventory or vendor
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+ certificate alone is not validation.
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+
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+ ### Identification and traceability
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+
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+ Define the required extent using approved product and jurisdictional decisions. Link
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+ materials/components, process records, acceptance/release, distribution, servicing,
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+ complaints, corrections/removals, and postmarket records as applicable.
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+
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+ ### Complaints, vigilance, and postmarket
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+
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+ Control intake, evaluation, investigation, product/risk impact, trend analysis,
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+ reportability decisions, communications, advisory/field actions, and feedback to
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+ risk, design, production, suppliers, CAPA, and management review. Authorized roles
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+ must make jurisdiction-specific reporting decisions.
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+
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+ ### Nonconformity and CAPA
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+
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+ Separate correction/containment from cause-directed action. Preserve scope, risk and
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+ reportability review, investigation, supported cause or conclusion, action ownership,
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+ change links, implementation evidence, pre-defined effectiveness criteria,
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+ independent review, and closure approval. Pending or ineffective checks cannot
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+ support closure.
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+
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+ ### Internal audit and management review
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+
210
+ Use a risk-based audit program, objective criteria/scope/sampling, competent and
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+ independent auditors, findings, corrections/CAPA, and effectiveness follow-up.
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+ Management review should use controlled inputs and record decisions, resources,
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+ actions, owners, dates, and follow-up. Neither activity can be replaced by a
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+ checklist-generated score.
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+
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+ ### Training, competence, and change control
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+
218
+ Define role competence, training need, completion, effectiveness, authorization, and
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+ records. Changes should assess source/version, product/risk, validation, software,
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+ supplier, document, record, training, postmarket, regulatory, and certification/audit
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+ impacts before implementation.
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+
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+ ## Evidence quality rule
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+
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+ For each domain, require:
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+
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+ 1. defined scope and accountable owner;
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+ 2. approved process/document status;
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+ 3. actual implementation records, not only a procedure;
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+ 4. traceable evidence IDs and controlled locations;
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+ 5. source/edition/version and currency-review evidence;
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+ 6. approval and effective dates;
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+ 7. open gaps, decisions, and change/CAPA links; and
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+ 8. sampling across products, sites, time periods, and risk where justified.
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+
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+ Use `references/source-ledger.md` for the dated official-source baseline.