@phi-code-admin/phi-code 0.74.3 → 0.75.1

package/dist/core/resource-loader.d.ts.map

@@ -1 +1 @@
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{ existsSync, readdirSync, readFileSync, statSync } from \"node:fs\";\nimport { homedir } from \"node:os\";\nimport { join, resolve, sep } from \"node:path\";\nimport chalk from \"chalk\";\nimport { CONFIG_DIR_NAME } from \"../config.js\";\nimport { loadThemeFromPath, type Theme } from \"../modes/interactive/theme/theme.js\";\nimport type { ResourceDiagnostic } from \"./diagnostics.js\";\n\nexport type { ResourceCollision, ResourceDiagnostic } from \"./diagnostics.js\";\n\nimport { canonicalizePath, isLocalPath } from \"../utils/paths.js\";\nimport { createEventBus, type EventBus } from \"./event-bus.js\";\nimport { createExtensionRuntime, loadExtensionFromFactory, loadExtensions } from \"./extensions/loader.js\";\nimport type { Extension, ExtensionFactory, ExtensionRuntime, LoadExtensionsResult } from \"./extensions/types.js\";\nimport { DefaultPackageManager, type PathMetadata } from \"./package-manager.js\";\nimport type { PromptTemplate } from \"./prompt-templates.js\";\nimport { loadPromptTemplates } from \"./prompt-templates.js\";\nimport { SettingsManager } from \"./settings-manager.js\";\nimport type { Skill } from \"./skills.js\";\nimport { loadSkills } from \"./skills.js\";\nimport { createSourceInfo, type SourceInfo } from \"./source-info.js\";\n\nexport interface ResourceExtensionPaths {\n\tskillPaths?: Array<{ path: string; metadata: PathMetadata }>;\n\tpromptPaths?: Array<{ path: string; metadata: PathMetadata }>;\n\tthemePaths?: Array<{ path: string; metadata: PathMetadata }>;\n}\n\nexport interface ResourceLoader {\n\tgetExtensions(): LoadExtensionsResult;\n\tgetSkills(): { skills: Skill[]; diagnostics: ResourceDiagnostic[] };\n\tgetPrompts(): { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] };\n\tgetThemes(): { themes: Theme[]; diagnostics: ResourceDiagnostic[] };\n\tgetAgentsFiles(): { agentsFiles: Array<{ path: string; content: string }> };\n\tgetSystemPrompt(): string | undefined;\n\tgetAppendSystemPrompt(): string[];\n\textendResources(paths: ResourceExtensionPaths): void;\n\treload(): Promise<void>;\n}\n\nfunction resolvePromptInput(input: string | undefined, description: string): string | undefined {\n\tif (!input) {\n\t\treturn undefined;\n\t}\n\n\tif (existsSync(input)) {\n\t\ttry {\n\t\t\treturn readFileSync(input, \"utf-8\");\n\t\t} catch (error) {\n\t\t\tconsole.error(chalk.yellow(`Warning: Could not read ${description} file ${input}: ${error}`));\n\t\t\treturn input;\n\t\t}\n\t}\n\n\treturn input;\n}\n\nfunction loadContextFileFromDir(dir: string): { path: string; content: string } | null {\n\tconst candidates = [\"AGENTS.md\", \"AGENTS.MD\", \"CLAUDE.md\", \"CLAUDE.MD\"];\n\tfor (const filename of candidates) {\n\t\tconst filePath = join(dir, filename);\n\t\tif (existsSync(filePath)) {\n\t\t\ttry {\n\t\t\t\treturn {\n\t\t\t\t\tpath: filePath,\n\t\t\t\t\tcontent: readFileSync(filePath, \"utf-8\"),\n\t\t\t\t};\n\t\t\t} catch (error) {\n\t\t\t\tconsole.error(chalk.yellow(`Warning: Could not read ${filePath}: ${error}`));\n\t\t\t}\n\t\t}\n\t}\n\treturn null;\n}\n\nexport function loadProjectContextFiles(options: {\n\tcwd: string;\n\tagentDir: string;\n}): Array<{ path: string; content: string }> {\n\tconst resolvedCwd = options.cwd;\n\tconst resolvedAgentDir = options.agentDir;\n\n\tconst contextFiles: Array<{ path: string; content: string }> = [];\n\tconst seenPaths = new Set<string>();\n\n\tconst globalContext = loadContextFileFromDir(resolvedAgentDir);\n\tif (globalContext) {\n\t\tcontextFiles.push(globalContext);\n\t\tseenPaths.add(globalContext.path);\n\t}\n\n\tconst ancestorContextFiles: Array<{ path: string; content: string }> = [];\n\n\tlet currentDir = resolvedCwd;\n\tconst root = resolve(\"/\");\n\n\twhile (true) {\n\t\tconst contextFile = loadContextFileFromDir(currentDir);\n\t\tif (contextFile && !seenPaths.has(contextFile.path)) {\n\t\t\tancestorContextFiles.unshift(contextFile);\n\t\t\tseenPaths.add(contextFile.path);\n\t\t}\n\n\t\tif (currentDir === root) break;\n\n\t\tconst parentDir = resolve(currentDir, \"..\");\n\t\tif (parentDir === currentDir) break;\n\t\tcurrentDir = parentDir;\n\t}\n\n\tcontextFiles.push(...ancestorContextFiles);\n\n\treturn contextFiles;\n}\n\nexport interface DefaultResourceLoaderOptions {\n\tcwd: string;\n\tagentDir: string;\n\tsettingsManager?: SettingsManager;\n\teventBus?: EventBus;\n\tadditionalExtensionPaths?: string[];\n\tadditionalSkillPaths?: string[];\n\tadditionalPromptTemplatePaths?: string[];\n\tadditionalThemePaths?: string[];\n\textensionFactories?: ExtensionFactory[];\n\tnoExtensions?: boolean;\n\tnoSkills?: boolean;\n\tnoPromptTemplates?: boolean;\n\tnoThemes?: boolean;\n\tnoContextFiles?: boolean;\n\tsystemPrompt?: string;\n\tappendSystemPrompt?: string[];\n\textensionsOverride?: (base: LoadExtensionsResult) => LoadExtensionsResult;\n\tskillsOverride?: (base: { skills: Skill[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tskills: Skill[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tpromptsOverride?: (base: { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tprompts: PromptTemplate[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tthemesOverride?: (base: { themes: Theme[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tthemes: Theme[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tagentsFilesOverride?: (base: { agentsFiles: Array<{ path: string; content: string }> }) => {\n\t\tagentsFiles: Array<{ path: string; content: string }>;\n\t};\n\tsystemPromptOverride?: (base: string | undefined) => string | undefined;\n\tappendSystemPromptOverride?: (base: string[]) => string[];\n}\n\nexport class DefaultResourceLoader implements ResourceLoader {\n\tprivate cwd: string;\n\tprivate agentDir: string;\n\tprivate settingsManager: SettingsManager;\n\tprivate eventBus: EventBus;\n\tprivate packageManager: DefaultPackageManager;\n\tprivate additionalExtensionPaths: string[];\n\tprivate additionalSkillPaths: string[];\n\tprivate additionalPromptTemplatePaths: string[];\n\tprivate additionalThemePaths: string[];\n\tprivate extensionFactories: ExtensionFactory[];\n\tprivate noExtensions: boolean;\n\tprivate noSkills: boolean;\n\tprivate noPromptTemplates: boolean;\n\tprivate noThemes: boolean;\n\tprivate noContextFiles: boolean;\n\tprivate systemPromptSource?: string;\n\tprivate appendSystemPromptSource?: string[];\n\tprivate extensionsOverride?: (base: LoadExtensionsResult) => LoadExtensionsResult;\n\tprivate skillsOverride?: (base: { skills: Skill[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tskills: Skill[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tprivate promptsOverride?: (base: { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tprompts: PromptTemplate[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tprivate themesOverride?: (base: { themes: Theme[]; diagnostics: ResourceDiagnostic[] }) => {\n\t\tthemes: Theme[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t};\n\tprivate agentsFilesOverride?: (base: { agentsFiles: Array<{ path: string; content: string }> }) => {\n\t\tagentsFiles: Array<{ path: string; content: string }>;\n\t};\n\tprivate systemPromptOverride?: (base: string | undefined) => string | undefined;\n\tprivate appendSystemPromptOverride?: (base: string[]) => string[];\n\n\tprivate extensionsResult: LoadExtensionsResult;\n\tprivate skills: Skill[];\n\tprivate skillDiagnostics: ResourceDiagnostic[];\n\tprivate prompts: PromptTemplate[];\n\tprivate promptDiagnostics: ResourceDiagnostic[];\n\tprivate themes: Theme[];\n\tprivate themeDiagnostics: ResourceDiagnostic[];\n\tprivate agentsFiles: Array<{ path: string; content: string }>;\n\tprivate systemPrompt?: string;\n\tprivate appendSystemPrompt: string[];\n\tprivate lastSkillPaths: string[];\n\tprivate extensionSkillSourceInfos: Map<string, SourceInfo>;\n\tprivate extensionPromptSourceInfos: Map<string, SourceInfo>;\n\tprivate extensionThemeSourceInfos: Map<string, SourceInfo>;\n\tprivate lastPromptPaths: string[];\n\tprivate lastThemePaths: string[];\n\n\tconstructor(options: DefaultResourceLoaderOptions) {\n\t\tthis.cwd = options.cwd;\n\t\tthis.agentDir = options.agentDir;\n\t\tthis.settingsManager = options.settingsManager ?? SettingsManager.create(this.cwd, this.agentDir);\n\t\tthis.eventBus = options.eventBus ?? createEventBus();\n\t\tthis.packageManager = new DefaultPackageManager({\n\t\t\tcwd: this.cwd,\n\t\t\tagentDir: this.agentDir,\n\t\t\tsettingsManager: this.settingsManager,\n\t\t});\n\t\tthis.additionalExtensionPaths = options.additionalExtensionPaths ?? [];\n\t\tthis.additionalSkillPaths = options.additionalSkillPaths ?? [];\n\t\tthis.additionalPromptTemplatePaths = options.additionalPromptTemplatePaths ?? [];\n\t\tthis.additionalThemePaths = options.additionalThemePaths ?? [];\n\t\tthis.extensionFactories = options.extensionFactories ?? [];\n\t\tthis.noExtensions = options.noExtensions ?? false;\n\t\tthis.noSkills = options.noSkills ?? false;\n\t\tthis.noPromptTemplates = options.noPromptTemplates ?? false;\n\t\tthis.noThemes = options.noThemes ?? false;\n\t\tthis.noContextFiles = options.noContextFiles ?? false;\n\t\tthis.systemPromptSource = options.systemPrompt;\n\t\tthis.appendSystemPromptSource = options.appendSystemPrompt;\n\t\tthis.extensionsOverride = options.extensionsOverride;\n\t\tthis.skillsOverride = options.skillsOverride;\n\t\tthis.promptsOverride = options.promptsOverride;\n\t\tthis.themesOverride = options.themesOverride;\n\t\tthis.agentsFilesOverride = options.agentsFilesOverride;\n\t\tthis.systemPromptOverride = options.systemPromptOverride;\n\t\tthis.appendSystemPromptOverride = options.appendSystemPromptOverride;\n\n\t\tthis.extensionsResult = { extensions: [], errors: [], runtime: createExtensionRuntime() };\n\t\tthis.skills = [];\n\t\tthis.skillDiagnostics = [];\n\t\tthis.prompts = [];\n\t\tthis.promptDiagnostics = [];\n\t\tthis.themes = [];\n\t\tthis.themeDiagnostics = [];\n\t\tthis.agentsFiles = [];\n\t\tthis.appendSystemPrompt = [];\n\t\tthis.lastSkillPaths = [];\n\t\tthis.extensionSkillSourceInfos = new Map();\n\t\tthis.extensionPromptSourceInfos = new Map();\n\t\tthis.extensionThemeSourceInfos = new Map();\n\t\tthis.lastPromptPaths = [];\n\t\tthis.lastThemePaths = [];\n\t}\n\n\tgetExtensions(): LoadExtensionsResult {\n\t\treturn this.extensionsResult;\n\t}\n\n\tgetSkills(): { skills: Skill[]; diagnostics: ResourceDiagnostic[] } {\n\t\treturn { skills: this.skills, diagnostics: this.skillDiagnostics };\n\t}\n\n\tgetPrompts(): { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] } {\n\t\treturn { prompts: this.prompts, diagnostics: this.promptDiagnostics };\n\t}\n\n\tgetThemes(): { themes: Theme[]; diagnostics: ResourceDiagnostic[] } {\n\t\treturn { themes: this.themes, diagnostics: this.themeDiagnostics };\n\t}\n\n\tgetAgentsFiles(): { agentsFiles: Array<{ path: string; content: string }> } {\n\t\treturn { agentsFiles: this.agentsFiles };\n\t}\n\n\tgetSystemPrompt(): string | undefined {\n\t\treturn this.systemPrompt;\n\t}\n\n\tgetAppendSystemPrompt(): string[] {\n\t\treturn this.appendSystemPrompt;\n\t}\n\n\textendResources(paths: ResourceExtensionPaths): void {\n\t\tconst skillPaths = this.normalizeExtensionPaths(paths.skillPaths ?? []);\n\t\tconst promptPaths = this.normalizeExtensionPaths(paths.promptPaths ?? []);\n\t\tconst themePaths = this.normalizeExtensionPaths(paths.themePaths ?? []);\n\n\t\tfor (const entry of skillPaths) {\n\t\t\tthis.extensionSkillSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));\n\t\t}\n\t\tfor (const entry of promptPaths) {\n\t\t\tthis.extensionPromptSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));\n\t\t}\n\t\tfor (const entry of themePaths) {\n\t\t\tthis.extensionThemeSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));\n\t\t}\n\n\t\tif (skillPaths.length > 0) {\n\t\t\tthis.lastSkillPaths = this.mergePaths(\n\t\t\t\tthis.lastSkillPaths,\n\t\t\t\tskillPaths.map((entry) => entry.path),\n\t\t\t);\n\t\t\tthis.updateSkillsFromPaths(this.lastSkillPaths);\n\t\t}\n\n\t\tif (promptPaths.length > 0) {\n\t\t\tthis.lastPromptPaths = this.mergePaths(\n\t\t\t\tthis.lastPromptPaths,\n\t\t\t\tpromptPaths.map((entry) => entry.path),\n\t\t\t);\n\t\t\tthis.updatePromptsFromPaths(this.lastPromptPaths);\n\t\t}\n\n\t\tif (themePaths.length > 0) {\n\t\t\tthis.lastThemePaths = this.mergePaths(\n\t\t\t\tthis.lastThemePaths,\n\t\t\t\tthemePaths.map((entry) => entry.path),\n\t\t\t);\n\t\t\tthis.updateThemesFromPaths(this.lastThemePaths);\n\t\t}\n\t}\n\n\tasync reload(): Promise<void> {\n\t\tawait this.settingsManager.reload();\n\t\tconst resolvedPaths = await this.packageManager.resolve();\n\t\tconst cliExtensionPaths = await this.packageManager.resolveExtensionSources(this.additionalExtensionPaths, {\n\t\t\ttemporary: true,\n\t\t});\n\t\tconst metadataByPath = new Map<string, PathMetadata>();\n\n\t\tthis.extensionSkillSourceInfos = new Map();\n\t\tthis.extensionPromptSourceInfos = new Map();\n\t\tthis.extensionThemeSourceInfos = new Map();\n\n\t\t// Helper to extract enabled paths and store metadata\n\t\tconst getEnabledResources = (\n\t\t\tresources: Array<{ path: string; enabled: boolean; metadata: PathMetadata }>,\n\t\t): Array<{ path: string; enabled: boolean; metadata: PathMetadata }> => {\n\t\t\tfor (const r of resources) {\n\t\t\t\tif (!metadataByPath.has(r.path)) {\n\t\t\t\t\tmetadataByPath.set(r.path, r.metadata);\n\t\t\t\t}\n\t\t\t}\n\t\t\treturn resources.filter((r) => r.enabled);\n\t\t};\n\n\t\tconst getEnabledPaths = (\n\t\t\tresources: Array<{ path: string; enabled: boolean; metadata: PathMetadata }>,\n\t\t): string[] => getEnabledResources(resources).map((r) => r.path);\n\t\tconst enabledExtensions = getEnabledPaths(resolvedPaths.extensions);\n\t\tconst enabledSkillResources = getEnabledResources(resolvedPaths.skills);\n\t\tconst enabledPrompts = getEnabledPaths(resolvedPaths.prompts);\n\t\tconst enabledThemes = getEnabledPaths(resolvedPaths.themes);\n\n\t\tconst mapSkillPath = (resource: { path: string; metadata: PathMetadata }): string => {\n\t\t\tif (resource.metadata.source !== \"auto\" && resource.metadata.origin !== \"package\") {\n\t\t\t\treturn resource.path;\n\t\t\t}\n\t\t\ttry {\n\t\t\t\tconst stats = statSync(resource.path);\n\t\t\t\tif (!stats.isDirectory()) {\n\t\t\t\t\treturn resource.path;\n\t\t\t\t}\n\t\t\t} catch {\n\t\t\t\treturn resource.path;\n\t\t\t}\n\t\t\tconst skillFile = join(resource.path, \"SKILL.md\");\n\t\t\tif (existsSync(skillFile)) {\n\t\t\t\tif (!metadataByPath.has(skillFile)) {\n\t\t\t\t\tmetadataByPath.set(skillFile, resource.metadata);\n\t\t\t\t}\n\t\t\t\treturn skillFile;\n\t\t\t}\n\t\t\treturn resource.path;\n\t\t};\n\n\t\tconst enabledSkills = enabledSkillResources.map(mapSkillPath);\n\n\t\t// Add CLI paths metadata\n\t\tfor (const r of cliExtensionPaths.extensions) {\n\t\t\tif (!metadataByPath.has(r.path)) {\n\t\t\t\tmetadataByPath.set(r.path, { source: \"cli\", scope: \"temporary\", origin: \"top-level\" });\n\t\t\t}\n\t\t}\n\t\tfor (const r of cliExtensionPaths.skills) {\n\t\t\tif (!metadataByPath.has(r.path)) {\n\t\t\t\tmetadataByPath.set(r.path, { source: \"cli\", scope: \"temporary\", origin: \"top-level\" });\n\t\t\t}\n\t\t}\n\n\t\tconst cliEnabledExtensions = getEnabledPaths(cliExtensionPaths.extensions);\n\t\tconst cliEnabledSkills = getEnabledPaths(cliExtensionPaths.skills);\n\t\tconst cliEnabledPrompts = getEnabledPaths(cliExtensionPaths.prompts);\n\t\tconst cliEnabledThemes = getEnabledPaths(cliExtensionPaths.themes);\n\n\t\tconst extensionPaths = this.noExtensions\n\t\t\t? cliEnabledExtensions\n\t\t\t: this.mergePaths(cliEnabledExtensions, enabledExtensions);\n\n\t\tconst extensionsResult = await loadExtensions(extensionPaths, this.cwd, this.eventBus);\n\t\tconst inlineExtensions = await this.loadExtensionFactories(extensionsResult.runtime);\n\t\textensionsResult.extensions.push(...inlineExtensions.extensions);\n\t\textensionsResult.errors.push(...inlineExtensions.errors);\n\n\t\t// Detect extension conflicts (tools, commands, flags with same names from different extensions)\n\t\t// Keep all extensions loaded. Conflicts are reported as diagnostics, and precedence is handled by load order.\n\t\tconst conflicts = this.detectExtensionConflicts(extensionsResult.extensions);\n\t\tfor (const conflict of conflicts) {\n\t\t\textensionsResult.errors.push({ path: conflict.path, error: conflict.message });\n\t\t}\n\n\t\tfor (const p of this.additionalExtensionPaths) {\n\t\t\tif (isLocalPath(p) && !existsSync(p)) {\n\t\t\t\textensionsResult.errors.push({ path: p, error: `Extension path does not exist: ${p}` });\n\t\t\t}\n\t\t}\n\t\tthis.extensionsResult = this.extensionsOverride ? this.extensionsOverride(extensionsResult) : extensionsResult;\n\t\tthis.applyExtensionSourceInfo(this.extensionsResult.extensions, metadataByPath);\n\n\t\tconst skillPaths = this.noSkills\n\t\t\t? this.mergePaths(cliEnabledSkills, this.additionalSkillPaths)\n\t\t\t: this.mergePaths([...cliEnabledSkills, ...enabledSkills], this.additionalSkillPaths);\n\n\t\tthis.lastSkillPaths = skillPaths;\n\t\tthis.updateSkillsFromPaths(skillPaths, metadataByPath);\n\t\tfor (const p of this.additionalSkillPaths) {\n\t\t\tif (isLocalPath(p) && !existsSync(p) && !this.skillDiagnostics.some((d) => d.path === p)) {\n\t\t\t\tthis.skillDiagnostics.push({ type: \"error\", message: \"Skill path does not exist\", path: p });\n\t\t\t}\n\t\t}\n\n\t\tconst promptPaths = this.noPromptTemplates\n\t\t\t? this.mergePaths(cliEnabledPrompts, this.additionalPromptTemplatePaths)\n\t\t\t: this.mergePaths([...cliEnabledPrompts, ...enabledPrompts], this.additionalPromptTemplatePaths);\n\n\t\tthis.lastPromptPaths = promptPaths;\n\t\tthis.updatePromptsFromPaths(promptPaths, metadataByPath);\n\t\tfor (const p of this.additionalPromptTemplatePaths) {\n\t\t\tif (isLocalPath(p) && !existsSync(p) && !this.promptDiagnostics.some((d) => d.path === p)) {\n\t\t\t\tthis.promptDiagnostics.push({ type: \"error\", message: \"Prompt template path does not exist\", path: p });\n\t\t\t}\n\t\t}\n\n\t\tconst themePaths = this.noThemes\n\t\t\t? this.mergePaths(cliEnabledThemes, this.additionalThemePaths)\n\t\t\t: this.mergePaths([...cliEnabledThemes, ...enabledThemes], this.additionalThemePaths);\n\n\t\tthis.lastThemePaths = themePaths;\n\t\tthis.updateThemesFromPaths(themePaths, metadataByPath);\n\t\tfor (const p of this.additionalThemePaths) {\n\t\t\tif (!existsSync(p) && !this.themeDiagnostics.some((d) => d.path === p)) {\n\t\t\t\tthis.themeDiagnostics.push({ type: \"error\", message: \"Theme path does not exist\", path: p });\n\t\t\t}\n\t\t}\n\n\t\tconst agentsFiles = {\n\t\t\tagentsFiles: this.noContextFiles ? [] : loadProjectContextFiles({ cwd: this.cwd, agentDir: this.agentDir }),\n\t\t};\n\t\tconst resolvedAgentsFiles = this.agentsFilesOverride ? this.agentsFilesOverride(agentsFiles) : agentsFiles;\n\t\tthis.agentsFiles = resolvedAgentsFiles.agentsFiles;\n\n\t\tconst baseSystemPrompt = resolvePromptInput(\n\t\t\tthis.systemPromptSource ?? this.discoverSystemPromptFile(),\n\t\t\t\"system prompt\",\n\t\t);\n\t\tthis.systemPrompt = this.systemPromptOverride ? this.systemPromptOverride(baseSystemPrompt) : baseSystemPrompt;\n\n\t\tconst appendSources =\n\t\t\tthis.appendSystemPromptSource ??\n\t\t\t(this.discoverAppendSystemPromptFile() ? [this.discoverAppendSystemPromptFile()!] : []);\n\t\tconst baseAppend = appendSources\n\t\t\t.map((s) => resolvePromptInput(s, \"append system prompt\"))\n\t\t\t.filter((s): s is string => s !== undefined);\n\t\tthis.appendSystemPrompt = this.appendSystemPromptOverride\n\t\t\t? this.appendSystemPromptOverride(baseAppend)\n\t\t\t: baseAppend;\n\t}\n\n\tprivate normalizeExtensionPaths(\n\t\tentries: Array<{ path: string; metadata: PathMetadata }>,\n\t): Array<{ path: string; metadata: PathMetadata }> {\n\t\treturn entries.map((entry) => ({\n\t\t\tpath: this.resolveResourcePath(entry.path),\n\t\t\tmetadata: entry.metadata,\n\t\t}));\n\t}\n\n\tprivate updateSkillsFromPaths(skillPaths: string[], metadataByPath?: Map<string, PathMetadata>): void {\n\t\tlet skillsResult: { skills: Skill[]; diagnostics: ResourceDiagnostic[] };\n\t\tif (this.noSkills && skillPaths.length === 0) {\n\t\t\tskillsResult = { skills: [], diagnostics: [] };\n\t\t} else {\n\t\t\tskillsResult = loadSkills({\n\t\t\t\tcwd: this.cwd,\n\t\t\t\tagentDir: this.agentDir,\n\t\t\t\tskillPaths,\n\t\t\t\tincludeDefaults: false,\n\t\t\t});\n\t\t}\n\t\tconst resolvedSkills = this.skillsOverride ? this.skillsOverride(skillsResult) : skillsResult;\n\t\tthis.skills = resolvedSkills.skills.map((skill) => ({\n\t\t\t...skill,\n\t\t\tsourceInfo:\n\t\t\t\tthis.findSourceInfoForPath(skill.filePath, this.extensionSkillSourceInfos, metadataByPath) ??\n\t\t\t\tskill.sourceInfo ??\n\t\t\t\tthis.getDefaultSourceInfoForPath(skill.filePath),\n\t\t}));\n\t\tthis.skillDiagnostics = resolvedSkills.diagnostics;\n\t}\n\n\tprivate updatePromptsFromPaths(promptPaths: string[], metadataByPath?: Map<string, PathMetadata>): void {\n\t\tlet promptsResult: { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] };\n\t\tif (this.noPromptTemplates && promptPaths.length === 0) {\n\t\t\tpromptsResult = { prompts: [], diagnostics: [] };\n\t\t} else {\n\t\t\tconst allPrompts = loadPromptTemplates({\n\t\t\t\tcwd: this.cwd,\n\t\t\t\tagentDir: this.agentDir,\n\t\t\t\tpromptPaths,\n\t\t\t\tincludeDefaults: false,\n\t\t\t});\n\t\t\tpromptsResult = this.dedupePrompts(allPrompts);\n\t\t}\n\t\tconst resolvedPrompts = this.promptsOverride ? this.promptsOverride(promptsResult) : promptsResult;\n\t\tthis.prompts = resolvedPrompts.prompts.map((prompt) => ({\n\t\t\t...prompt,\n\t\t\tsourceInfo:\n\t\t\t\tthis.findSourceInfoForPath(prompt.filePath, this.extensionPromptSourceInfos, metadataByPath) ??\n\t\t\t\tprompt.sourceInfo ??\n\t\t\t\tthis.getDefaultSourceInfoForPath(prompt.filePath),\n\t\t}));\n\t\tthis.promptDiagnostics = resolvedPrompts.diagnostics;\n\t}\n\n\tprivate updateThemesFromPaths(themePaths: string[], metadataByPath?: Map<string, PathMetadata>): void {\n\t\tlet themesResult: { themes: Theme[]; diagnostics: ResourceDiagnostic[] };\n\t\tif (this.noThemes && themePaths.length === 0) {\n\t\t\tthemesResult = { themes: [], diagnostics: [] };\n\t\t} else {\n\t\t\tconst loaded = this.loadThemes(themePaths, false);\n\t\t\tconst deduped = this.dedupeThemes(loaded.themes);\n\t\t\tthemesResult = { themes: deduped.themes, diagnostics: [...loaded.diagnostics, ...deduped.diagnostics] };\n\t\t}\n\t\tconst resolvedThemes = this.themesOverride ? this.themesOverride(themesResult) : themesResult;\n\t\tthis.themes = resolvedThemes.themes.map((theme) => {\n\t\t\tconst sourcePath = theme.sourcePath;\n\t\t\ttheme.sourceInfo = sourcePath\n\t\t\t\t? (this.findSourceInfoForPath(sourcePath, this.extensionThemeSourceInfos, metadataByPath) ??\n\t\t\t\t\ttheme.sourceInfo ??\n\t\t\t\t\tthis.getDefaultSourceInfoForPath(sourcePath))\n\t\t\t\t: theme.sourceInfo;\n\t\t\treturn theme;\n\t\t});\n\t\tthis.themeDiagnostics = resolvedThemes.diagnostics;\n\t}\n\n\tprivate applyExtensionSourceInfo(extensions: Extension[], metadataByPath: Map<string, PathMetadata>): void {\n\t\tfor (const extension of extensions) {\n\t\t\textension.sourceInfo =\n\t\t\t\tthis.findSourceInfoForPath(extension.path, undefined, metadataByPath) ??\n\t\t\t\tthis.getDefaultSourceInfoForPath(extension.path);\n\t\t\tfor (const command of extension.commands.values()) {\n\t\t\t\tcommand.sourceInfo = extension.sourceInfo;\n\t\t\t}\n\t\t\tfor (const tool of extension.tools.values()) {\n\t\t\t\ttool.sourceInfo = extension.sourceInfo;\n\t\t\t}\n\t\t}\n\t}\n\n\tprivate findSourceInfoForPath(\n\t\tresourcePath: string,\n\t\textraSourceInfos?: Map<string, SourceInfo>,\n\t\tmetadataByPath?: Map<string, PathMetadata>,\n\t): SourceInfo | undefined {\n\t\tif (!resourcePath) {\n\t\t\treturn undefined;\n\t\t}\n\n\t\tif (resourcePath.startsWith(\"<\")) {\n\t\t\treturn this.getDefaultSourceInfoForPath(resourcePath);\n\t\t}\n\n\t\tconst normalizedResourcePath = resolve(resourcePath);\n\t\tif (extraSourceInfos) {\n\t\t\tfor (const [sourcePath, sourceInfo] of extraSourceInfos.entries()) {\n\t\t\t\tconst normalizedSourcePath = resolve(sourcePath);\n\t\t\t\tif (\n\t\t\t\t\tnormalizedResourcePath === normalizedSourcePath ||\n\t\t\t\t\tnormalizedResourcePath.startsWith(`${normalizedSourcePath}${sep}`)\n\t\t\t\t) {\n\t\t\t\t\treturn { ...sourceInfo, path: resourcePath };\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\n\t\tif (metadataByPath) {\n\t\t\tconst exact = metadataByPath.get(normalizedResourcePath) ?? metadataByPath.get(resourcePath);\n\t\t\tif (exact) {\n\t\t\t\treturn createSourceInfo(resourcePath, exact);\n\t\t\t}\n\n\t\t\tfor (const [sourcePath, metadata] of metadataByPath.entries()) {\n\t\t\t\tconst normalizedSourcePath = resolve(sourcePath);\n\t\t\t\tif (\n\t\t\t\t\tnormalizedResourcePath === normalizedSourcePath ||\n\t\t\t\t\tnormalizedResourcePath.startsWith(`${normalizedSourcePath}${sep}`)\n\t\t\t\t) {\n\t\t\t\t\treturn createSourceInfo(resourcePath, metadata);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\n\t\treturn undefined;\n\t}\n\n\tprivate getDefaultSourceInfoForPath(filePath: string): SourceInfo {\n\t\tif (filePath.startsWith(\"<\") && filePath.endsWith(\">\")) {\n\t\t\treturn {\n\t\t\t\tpath: filePath,\n\t\t\t\tsource: filePath.slice(1, -1).split(\":\")[0] || \"temporary\",\n\t\t\t\tscope: \"temporary\",\n\t\t\t\torigin: \"top-level\",\n\t\t\t};\n\t\t}\n\n\t\tconst normalizedPath = resolve(filePath);\n\t\tconst agentRoots = [\n\t\t\tjoin(this.agentDir, \"skills\"),\n\t\t\tjoin(this.agentDir, \"prompts\"),\n\t\t\tjoin(this.agentDir, \"themes\"),\n\t\t\tjoin(this.agentDir, \"extensions\"),\n\t\t];\n\t\tconst projectRoots = [\n\t\t\tjoin(this.cwd, CONFIG_DIR_NAME, \"skills\"),\n\t\t\tjoin(this.cwd, CONFIG_DIR_NAME, \"prompts\"),\n\t\t\tjoin(this.cwd, CONFIG_DIR_NAME, \"themes\"),\n\t\t\tjoin(this.cwd, CONFIG_DIR_NAME, \"extensions\"),\n\t\t];\n\n\t\tfor (const root of agentRoots) {\n\t\t\tif (this.isUnderPath(normalizedPath, root)) {\n\t\t\t\treturn { path: filePath, source: \"local\", scope: \"user\", origin: \"top-level\", baseDir: root };\n\t\t\t}\n\t\t}\n\n\t\tfor (const root of projectRoots) {\n\t\t\tif (this.isUnderPath(normalizedPath, root)) {\n\t\t\t\treturn { path: filePath, source: \"local\", scope: \"project\", origin: \"top-level\", baseDir: root };\n\t\t\t}\n\t\t}\n\n\t\treturn {\n\t\t\tpath: filePath,\n\t\t\tsource: \"local\",\n\t\t\tscope: \"temporary\",\n\t\t\torigin: \"top-level\",\n\t\t\tbaseDir: statSync(normalizedPath).isDirectory() ? normalizedPath : resolve(normalizedPath, \"..\"),\n\t\t};\n\t}\n\n\tprivate mergePaths(primary: string[], additional: string[]): string[] {\n\t\tconst merged: string[] = [];\n\t\tconst seen = new Set<string>();\n\n\t\tfor (const p of [...primary, ...additional]) {\n\t\t\tconst resolved = this.resolveResourcePath(p);\n\t\t\tconst canonicalPath = canonicalizePath(resolved);\n\t\t\tif (seen.has(canonicalPath)) continue;\n\t\t\tseen.add(canonicalPath);\n\t\t\tmerged.push(resolved);\n\t\t}\n\n\t\treturn merged;\n\t}\n\n\tprivate resolveResourcePath(p: string): string {\n\t\tconst trimmed = p.trim();\n\t\tlet expanded = trimmed;\n\t\tif (trimmed === \"~\") {\n\t\t\texpanded = homedir();\n\t\t} else if (trimmed.startsWith(\"~/\")) {\n\t\t\texpanded = join(homedir(), trimmed.slice(2));\n\t\t} else if (trimmed.startsWith(\"~\")) {\n\t\t\texpanded = join(homedir(), trimmed.slice(1));\n\t\t}\n\t\treturn resolve(this.cwd, expanded);\n\t}\n\n\tprivate loadThemes(\n\t\tpaths: string[],\n\t\tincludeDefaults: boolean = true,\n\t): {\n\t\tthemes: Theme[];\n\t\tdiagnostics: ResourceDiagnostic[];\n\t} {\n\t\tconst themes: Theme[] = [];\n\t\tconst diagnostics: ResourceDiagnostic[] = [];\n\t\tif (includeDefaults) {\n\t\t\tconst defaultDirs = [join(this.agentDir, \"themes\"), join(this.cwd, CONFIG_DIR_NAME, \"themes\")];\n\n\t\t\tfor (const dir of defaultDirs) {\n\t\t\t\tthis.loadThemesFromDir(dir, themes, diagnostics);\n\t\t\t}\n\t\t}\n\n\t\tfor (const p of paths) {\n\t\t\tconst resolved = resolve(this.cwd, p);\n\t\t\tif (!existsSync(resolved)) {\n\t\t\t\tdiagnostics.push({ type: \"warning\", message: \"theme path does not exist\", path: resolved });\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\ttry {\n\t\t\t\tconst stats = statSync(resolved);\n\t\t\t\tif (stats.isDirectory()) {\n\t\t\t\t\tthis.loadThemesFromDir(resolved, themes, diagnostics);\n\t\t\t\t} else if (stats.isFile() && resolved.endsWith(\".json\")) {\n\t\t\t\t\tthis.loadThemeFromFile(resolved, themes, diagnostics);\n\t\t\t\t} else {\n\t\t\t\t\tdiagnostics.push({ type: \"warning\", message: \"theme path is not a json file\", path: resolved });\n\t\t\t\t}\n\t\t\t} catch (error) {\n\t\t\t\tconst message = error instanceof Error ? error.message : \"failed to read theme path\";\n\t\t\t\tdiagnostics.push({ type: \"warning\", message, path: resolved });\n\t\t\t}\n\t\t}\n\n\t\treturn { themes, diagnostics };\n\t}\n\n\tprivate loadThemesFromDir(dir: string, themes: Theme[], diagnostics: ResourceDiagnostic[]): void {\n\t\tif (!existsSync(dir)) {\n\t\t\treturn;\n\t\t}\n\n\t\ttry {\n\t\t\tconst entries = readdirSync(dir, { withFileTypes: true });\n\t\t\tfor (const entry of entries) {\n\t\t\t\tlet isFile = entry.isFile();\n\t\t\t\tif (entry.isSymbolicLink()) {\n\t\t\t\t\ttry {\n\t\t\t\t\t\tisFile = statSync(join(dir, entry.name)).isFile();\n\t\t\t\t\t} catch {\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t\tif (!isFile) {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t\tif (!entry.name.endsWith(\".json\")) {\n\t\t\t\t\tcontinue;\n\t\t\t\t}\n\t\t\t\tthis.loadThemeFromFile(join(dir, entry.name), themes, diagnostics);\n\t\t\t}\n\t\t} catch (error) {\n\t\t\tconst message = error instanceof Error ? error.message : \"failed to read theme directory\";\n\t\t\tdiagnostics.push({ type: \"warning\", message, path: dir });\n\t\t}\n\t}\n\n\tprivate loadThemeFromFile(filePath: string, themes: Theme[], diagnostics: ResourceDiagnostic[]): void {\n\t\ttry {\n\t\t\tthemes.push(loadThemeFromPath(filePath));\n\t\t} catch (error) {\n\t\t\tconst message = error instanceof Error ? error.message : \"failed to load theme\";\n\t\t\tdiagnostics.push({ type: \"warning\", message, path: filePath });\n\t\t}\n\t}\n\n\tprivate async loadExtensionFactories(runtime: ExtensionRuntime): Promise<{\n\t\textensions: Extension[];\n\t\terrors: Array<{ path: string; error: string }>;\n\t}> {\n\t\tconst extensions: Extension[] = [];\n\t\tconst errors: Array<{ path: string; error: string }> = [];\n\n\t\tfor (const [index, factory] of this.extensionFactories.entries()) {\n\t\t\tconst extensionPath = `<inline:${index + 1}>`;\n\t\t\ttry {\n\t\t\t\tconst extension = await loadExtensionFromFactory(factory, this.cwd, this.eventBus, runtime, extensionPath);\n\t\t\t\textensions.push(extension);\n\t\t\t} catch (error) {\n\t\t\t\tconst message = error instanceof Error ? error.message : \"failed to load extension\";\n\t\t\t\terrors.push({ path: extensionPath, error: message });\n\t\t\t}\n\t\t}\n\n\t\treturn { extensions, errors };\n\t}\n\n\tprivate dedupePrompts(prompts: PromptTemplate[]): { prompts: PromptTemplate[]; diagnostics: ResourceDiagnostic[] } {\n\t\tconst seen = new Map<string, PromptTemplate>();\n\t\tconst diagnostics: ResourceDiagnostic[] = [];\n\n\t\tfor (const prompt of prompts) {\n\t\t\tconst existing = seen.get(prompt.name);\n\t\t\tif (existing) {\n\t\t\t\tdiagnostics.push({\n\t\t\t\t\ttype: \"collision\",\n\t\t\t\t\tmessage: `name \"/${prompt.name}\" collision`,\n\t\t\t\t\tpath: prompt.filePath,\n\t\t\t\t\tcollision: {\n\t\t\t\t\t\tresourceType: \"prompt\",\n\t\t\t\t\t\tname: prompt.name,\n\t\t\t\t\t\twinnerPath: existing.filePath,\n\t\t\t\t\t\tloserPath: prompt.filePath,\n\t\t\t\t\t},\n\t\t\t\t});\n\t\t\t} else {\n\t\t\t\tseen.set(prompt.name, prompt);\n\t\t\t}\n\t\t}\n\n\t\treturn { prompts: Array.from(seen.values()), diagnostics };\n\t}\n\n\tprivate dedupeThemes(themes: Theme[]): { themes: Theme[]; diagnostics: ResourceDiagnostic[] } {\n\t\tconst seen = new Map<string, Theme>();\n\t\tconst diagnostics: ResourceDiagnostic[] = [];\n\n\t\tfor (const t of themes) {\n\t\t\tconst name = t.name ?? \"unnamed\";\n\t\t\tconst existing = seen.get(name);\n\t\t\tif (existing) {\n\t\t\t\tdiagnostics.push({\n\t\t\t\t\ttype: \"collision\",\n\t\t\t\t\tmessage: `name \"${name}\" collision`,\n\t\t\t\t\tpath: t.sourcePath,\n\t\t\t\t\tcollision: {\n\t\t\t\t\t\tresourceType: \"theme\",\n\t\t\t\t\t\tname,\n\t\t\t\t\t\twinnerPath: existing.sourcePath ?? \"<builtin>\",\n\t\t\t\t\t\tloserPath: t.sourcePath ?? \"<builtin>\",\n\t\t\t\t\t},\n\t\t\t\t});\n\t\t\t} else {\n\t\t\t\tseen.set(name, t);\n\t\t\t}\n\t\t}\n\n\t\treturn { themes: Array.from(seen.values()), diagnostics };\n\t}\n\n\tprivate discoverSystemPromptFile(): string | undefined {\n\t\tconst projectPath = join(this.cwd, CONFIG_DIR_NAME, \"SYSTEM.md\");\n\t\tif (existsSync(projectPath)) {\n\t\t\treturn projectPath;\n\t\t}\n\n\t\tconst globalPath = join(this.agentDir, \"SYSTEM.md\");\n\t\tif (existsSync(globalPath)) {\n\t\t\treturn globalPath;\n\t\t}\n\n\t\treturn undefined;\n\t}\n\n\tprivate discoverAppendSystemPromptFile(): string | undefined {\n\t\tconst projectPath = join(this.cwd, CONFIG_DIR_NAME, \"APPEND_SYSTEM.md\");\n\t\tif (existsSync(projectPath)) {\n\t\t\treturn projectPath;\n\t\t}\n\n\t\tconst globalPath = join(this.agentDir, \"APPEND_SYSTEM.md\");\n\t\tif (existsSync(globalPath)) {\n\t\t\treturn globalPath;\n\t\t}\n\n\t\treturn undefined;\n\t}\n\n\tprivate isUnderPath(target: string, root: string): boolean {\n\t\tconst normalizedRoot = resolve(root);\n\t\tif (target === normalizedRoot) {\n\t\t\treturn true;\n\t\t}\n\t\tconst prefix = normalizedRoot.endsWith(sep) ? normalizedRoot : `${normalizedRoot}${sep}`;\n\t\treturn target.startsWith(prefix);\n\t}\n\n\tprivate detectExtensionConflicts(extensions: Extension[]): Array<{ path: string; message: string }> {\n\t\tconst conflicts: Array<{ path: string; message: string }> = [];\n\n\t\t// Track which extension registered each tool and flag\n\t\tconst toolOwners = new Map<string, string>();\n\t\tconst flagOwners = new Map<string, string>();\n\n\t\tfor (const ext of extensions) {\n\t\t\t// Check tools\n\t\t\tfor (const toolName of ext.tools.keys()) {\n\t\t\t\tconst existingOwner = toolOwners.get(toolName);\n\t\t\t\tif (existingOwner && existingOwner !== ext.path) {\n\t\t\t\t\tconflicts.push({\n\t\t\t\t\t\tpath: ext.path,\n\t\t\t\t\t\tmessage: `Tool \"${toolName}\" conflicts with ${existingOwner}`,\n\t\t\t\t\t});\n\t\t\t\t} else {\n\t\t\t\t\ttoolOwners.set(toolName, ext.path);\n\t\t\t\t}\n\t\t\t}\n\n\t\t\t// Check flags\n\t\t\tfor (const flagName of ext.flags.keys()) {\n\t\t\t\tconst existingOwner = flagOwners.get(flagName);\n\t\t\t\tif (existingOwner && existingOwner !== ext.path) {\n\t\t\t\t\tconflicts.push({\n\t\t\t\t\t\tpath: ext.path,\n\t\t\t\t\t\tmessage: `Flag \"--${flagName}\" conflicts with ${existingOwner}`,\n\t\t\t\t\t});\n\t\t\t\t} else {\n\t\t\t\t\tflagOwners.set(flagName, ext.path);\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\n\t\treturn conflicts;\n\t}\n}\n"]}

package/dist/core/resource-loader.js

@@ -2,14 +2,16 @@ import { existsSync, readdirSync, readFileSync, statSync } from "node:fs";
 import { homedir } from "node:os";
 import { join, resolve, sep } from "node:path";
 import chalk from "chalk";
-import { CONFIG_DIR_NAME, getAgentDir } from "../config.js";
+import { CONFIG_DIR_NAME } from "../config.js";
 import { loadThemeFromPath } from "../modes/interactive/theme/theme.js";
+import { canonicalizePath, isLocalPath } from "../utils/paths.js";
 import { createEventBus } from "./event-bus.js";
 import { createExtensionRuntime, loadExtensionFromFactory, loadExtensions } from "./extensions/loader.js";
 import { DefaultPackageManager } from "./package-manager.js";
 import { loadPromptTemplates } from "./prompt-templates.js";
 import { SettingsManager } from "./settings-manager.js";
 import { loadSkills } from "./skills.js";
+import { createSourceInfo } from "./source-info.js";
 function resolvePromptInput(input, description) {
     if (!input) {
         return undefined;
@@ -26,7 +28,7 @@ function resolvePromptInput(input, description) {
     return input;
 }
 function loadContextFileFromDir(dir) {
-    const candidates = ["AGENTS.md", "CLAUDE.md"];
+    const candidates = ["AGENTS.md", "AGENTS.MD", "CLAUDE.md", "CLAUDE.MD"];
     for (const filename of candidates) {
         const filePath = join(dir, filename);
         if (existsSync(filePath)) {
@@ -43,9 +45,9 @@ function loadContextFileFromDir(dir) {
     }
     return null;
 }
-function loadProjectContextFiles(options = {}) {
-    const resolvedCwd = options.cwd ?? process.cwd();
-    const resolvedAgentDir = options.agentDir ?? getAgentDir();
+export function loadProjectContextFiles(options) {
+    const resolvedCwd = options.cwd;
+    const resolvedAgentDir = options.agentDir;
     const contextFiles = [];
     const seenPaths = new Set();
     const globalContext = loadContextFileFromDir(resolvedAgentDir);
@@ -73,9 +75,49 @@ function loadProjectContextFiles(options = {}) {
     return contextFiles;
 }
 export class DefaultResourceLoader {
+    cwd;
+    agentDir;
+    settingsManager;
+    eventBus;
+    packageManager;
+    additionalExtensionPaths;
+    additionalSkillPaths;
+    additionalPromptTemplatePaths;
+    additionalThemePaths;
+    extensionFactories;
+    noExtensions;
+    noSkills;
+    noPromptTemplates;
+    noThemes;
+    noContextFiles;
+    systemPromptSource;
+    appendSystemPromptSource;
+    extensionsOverride;
+    skillsOverride;
+    promptsOverride;
+    themesOverride;
+    agentsFilesOverride;
+    systemPromptOverride;
+    appendSystemPromptOverride;
+    extensionsResult;
+    skills;
+    skillDiagnostics;
+    prompts;
+    promptDiagnostics;
+    themes;
+    themeDiagnostics;
+    agentsFiles;
+    systemPrompt;
+    appendSystemPrompt;
+    lastSkillPaths;
+    extensionSkillSourceInfos;
+    extensionPromptSourceInfos;
+    extensionThemeSourceInfos;
+    lastPromptPaths;
+    lastThemePaths;
     constructor(options) {
-        this.cwd = options.cwd ?? process.cwd();
-        this.agentDir = options.agentDir ?? getAgentDir();
+        this.cwd = options.cwd;
+        this.agentDir = options.agentDir;
         this.settingsManager = options.settingsManager ?? SettingsManager.create(this.cwd, this.agentDir);
         this.eventBus = options.eventBus ?? createEventBus();
         this.packageManager = new DefaultPackageManager({
@@ -92,6 +134,7 @@ export class DefaultResourceLoader {
         this.noSkills = options.noSkills ?? false;
         this.noPromptTemplates = options.noPromptTemplates ?? false;
         this.noThemes = options.noThemes ?? false;
+        this.noContextFiles = options.noContextFiles ?? false;
         this.systemPromptSource = options.systemPrompt;
         this.appendSystemPromptSource = options.appendSystemPrompt;
         this.extensionsOverride = options.extensionsOverride;
@@ -110,8 +153,10 @@ export class DefaultResourceLoader {
         this.themeDiagnostics = [];
         this.agentsFiles = [];
         this.appendSystemPrompt = [];
-        this.pathMetadata = new Map();
         this.lastSkillPaths = [];
+        this.extensionSkillSourceInfos = new Map();
+        this.extensionPromptSourceInfos = new Map();
+        this.extensionThemeSourceInfos = new Map();
         this.lastPromptPaths = [];
         this.lastThemePaths = [];
     }
@@ -136,43 +181,52 @@ export class DefaultResourceLoader {
     getAppendSystemPrompt() {
         return this.appendSystemPrompt;
     }
-    getPathMetadata() {
-        return this.pathMetadata;
-    }
     extendResources(paths) {
         const skillPaths = this.normalizeExtensionPaths(paths.skillPaths ?? []);
         const promptPaths = this.normalizeExtensionPaths(paths.promptPaths ?? []);
         const themePaths = this.normalizeExtensionPaths(paths.themePaths ?? []);
+        for (const entry of skillPaths) {
+            this.extensionSkillSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));
+        }
+        for (const entry of promptPaths) {
+            this.extensionPromptSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));
+        }
+        for (const entry of themePaths) {
+            this.extensionThemeSourceInfos.set(entry.path, createSourceInfo(entry.path, entry.metadata));
+        }
         if (skillPaths.length > 0) {
             this.lastSkillPaths = this.mergePaths(this.lastSkillPaths, skillPaths.map((entry) => entry.path));
-            this.updateSkillsFromPaths(this.lastSkillPaths, skillPaths);
+            this.updateSkillsFromPaths(this.lastSkillPaths);
         }
         if (promptPaths.length > 0) {
             this.lastPromptPaths = this.mergePaths(this.lastPromptPaths, promptPaths.map((entry) => entry.path));
-            this.updatePromptsFromPaths(this.lastPromptPaths, promptPaths);
+            this.updatePromptsFromPaths(this.lastPromptPaths);
         }
         if (themePaths.length > 0) {
             this.lastThemePaths = this.mergePaths(this.lastThemePaths, themePaths.map((entry) => entry.path));
-            this.updateThemesFromPaths(this.lastThemePaths, themePaths);
+            this.updateThemesFromPaths(this.lastThemePaths);
         }
     }
     async reload() {
+        await this.settingsManager.reload();
         const resolvedPaths = await this.packageManager.resolve();
         const cliExtensionPaths = await this.packageManager.resolveExtensionSources(this.additionalExtensionPaths, {
             temporary: true,
         });
+        const metadataByPath = new Map();
+        this.extensionSkillSourceInfos = new Map();
+        this.extensionPromptSourceInfos = new Map();
+        this.extensionThemeSourceInfos = new Map();
         // Helper to extract enabled paths and store metadata
         const getEnabledResources = (resources) => {
             for (const r of resources) {
-                if (!this.pathMetadata.has(r.path)) {
-                    this.pathMetadata.set(r.path, r.metadata);
+                if (!metadataByPath.has(r.path)) {
+                    metadataByPath.set(r.path, r.metadata);
                 }
             }
             return resources.filter((r) => r.enabled);
         };
         const getEnabledPaths = (resources) => getEnabledResources(resources).map((r) => r.path);
-        // Store metadata and get enabled paths
-        this.pathMetadata = new Map();
         const enabledExtensions = getEnabledPaths(resolvedPaths.extensions);
         const enabledSkillResources = getEnabledResources(resolvedPaths.skills);
         const enabledPrompts = getEnabledPaths(resolvedPaths.prompts);
@@ -192,8 +246,8 @@ export class DefaultResourceLoader {
             }
             const skillFile = join(resource.path, "SKILL.md");
             if (existsSync(skillFile)) {
-                if (!this.pathMetadata.has(skillFile)) {
-                    this.pathMetadata.set(skillFile, resource.metadata);
+                if (!metadataByPath.has(skillFile)) {
+                    metadataByPath.set(skillFile, resource.metadata);
                 }
                 return skillFile;
             }
@@ -202,13 +256,13 @@ export class DefaultResourceLoader {
         const enabledSkills = enabledSkillResources.map(mapSkillPath);
         // Add CLI paths metadata
         for (const r of cliExtensionPaths.extensions) {
-            if (!this.pathMetadata.has(r.path)) {
-                this.pathMetadata.set(r.path, { source: "cli", scope: "temporary", origin: "top-level" });
+            if (!metadataByPath.has(r.path)) {
+                metadataByPath.set(r.path, { source: "cli", scope: "temporary", origin: "top-level" });
             }
         }
         for (const r of cliExtensionPaths.skills) {
-            if (!this.pathMetadata.has(r.path)) {
-                this.pathMetadata.set(r.path, { source: "cli", scope: "temporary", origin: "top-level" });
+            if (!metadataByPath.has(r.path)) {
+                metadataByPath.set(r.path, { source: "cli", scope: "temporary", origin: "top-level" });
             }
         }
         const cliEnabledExtensions = getEnabledPaths(cliExtensionPaths.extensions);
@@ -217,7 +271,7 @@ export class DefaultResourceLoader {
         const cliEnabledThemes = getEnabledPaths(cliExtensionPaths.themes);
         const extensionPaths = this.noExtensions
             ? cliEnabledExtensions
-            : this.mergePaths(enabledExtensions, cliEnabledExtensions);
+            : this.mergePaths(cliEnabledExtensions, enabledExtensions);
         const extensionsResult = await loadExtensions(extensionPaths, this.cwd, this.eventBus);
         const inlineExtensions = await this.loadExtensionFactories(extensionsResult.runtime);
         extensionsResult.extensions.push(...inlineExtensions.extensions);
@@ -228,33 +282,55 @@ export class DefaultResourceLoader {
         for (const conflict of conflicts) {
             extensionsResult.errors.push({ path: conflict.path, error: conflict.message });
         }
+        for (const p of this.additionalExtensionPaths) {
+            if (isLocalPath(p) && !existsSync(p)) {
+                extensionsResult.errors.push({ path: p, error: `Extension path does not exist: ${p}` });
+            }
+        }
         this.extensionsResult = this.extensionsOverride ? this.extensionsOverride(extensionsResult) : extensionsResult;
+        this.applyExtensionSourceInfo(this.extensionsResult.extensions, metadataByPath);
         const skillPaths = this.noSkills
             ? this.mergePaths(cliEnabledSkills, this.additionalSkillPaths)
-            : this.mergePaths([...enabledSkills, ...cliEnabledSkills], this.additionalSkillPaths);
+            : this.mergePaths([...cliEnabledSkills, ...enabledSkills], this.additionalSkillPaths);
         this.lastSkillPaths = skillPaths;
-        this.updateSkillsFromPaths(skillPaths);
+        this.updateSkillsFromPaths(skillPaths, metadataByPath);
+        for (const p of this.additionalSkillPaths) {
+            if (isLocalPath(p) && !existsSync(p) && !this.skillDiagnostics.some((d) => d.path === p)) {
+                this.skillDiagnostics.push({ type: "error", message: "Skill path does not exist", path: p });
+            }
+        }
         const promptPaths = this.noPromptTemplates
             ? this.mergePaths(cliEnabledPrompts, this.additionalPromptTemplatePaths)
-            : this.mergePaths([...enabledPrompts, ...cliEnabledPrompts], this.additionalPromptTemplatePaths);
+            : this.mergePaths([...cliEnabledPrompts, ...enabledPrompts], this.additionalPromptTemplatePaths);
         this.lastPromptPaths = promptPaths;
-        this.updatePromptsFromPaths(promptPaths);
+        this.updatePromptsFromPaths(promptPaths, metadataByPath);
+        for (const p of this.additionalPromptTemplatePaths) {
+            if (isLocalPath(p) && !existsSync(p) && !this.promptDiagnostics.some((d) => d.path === p)) {
+                this.promptDiagnostics.push({ type: "error", message: "Prompt template path does not exist", path: p });
+            }
+        }
         const themePaths = this.noThemes
             ? this.mergePaths(cliEnabledThemes, this.additionalThemePaths)
-            : this.mergePaths([...enabledThemes, ...cliEnabledThemes], this.additionalThemePaths);
+            : this.mergePaths([...cliEnabledThemes, ...enabledThemes], this.additionalThemePaths);
         this.lastThemePaths = themePaths;
-        this.updateThemesFromPaths(themePaths);
-        for (const extension of this.extensionsResult.extensions) {
-            this.addDefaultMetadataForPath(extension.path);
+        this.updateThemesFromPaths(themePaths, metadataByPath);
+        for (const p of this.additionalThemePaths) {
+            if (!existsSync(p) && !this.themeDiagnostics.some((d) => d.path === p)) {
+                this.themeDiagnostics.push({ type: "error", message: "Theme path does not exist", path: p });
+            }
         }
-        const agentsFiles = { agentsFiles: loadProjectContextFiles({ cwd: this.cwd, agentDir: this.agentDir }) };
+        const agentsFiles = {
+            agentsFiles: this.noContextFiles ? [] : loadProjectContextFiles({ cwd: this.cwd, agentDir: this.agentDir }),
+        };
         const resolvedAgentsFiles = this.agentsFilesOverride ? this.agentsFilesOverride(agentsFiles) : agentsFiles;
         this.agentsFiles = resolvedAgentsFiles.agentsFiles;
         const baseSystemPrompt = resolvePromptInput(this.systemPromptSource ?? this.discoverSystemPromptFile(), "system prompt");
         this.systemPrompt = this.systemPromptOverride ? this.systemPromptOverride(baseSystemPrompt) : baseSystemPrompt;
-        const appendSource = this.appendSystemPromptSource ?? this.discoverAppendSystemPromptFile();
-        const resolvedAppend = resolvePromptInput(appendSource, "append system prompt");
-        const baseAppend = resolvedAppend ? [resolvedAppend] : [];
+        const appendSources = this.appendSystemPromptSource ??
+            (this.discoverAppendSystemPromptFile() ? [this.discoverAppendSystemPromptFile()] : []);
+        const baseAppend = appendSources
+            .map((s) => resolvePromptInput(s, "append system prompt"))
+            .filter((s) => s !== undefined);
         this.appendSystemPrompt = this.appendSystemPromptOverride
             ? this.appendSystemPromptOverride(baseAppend)
             : baseAppend;
@@ -265,7 +341,7 @@ export class DefaultResourceLoader {
             metadata: entry.metadata,
         }));
     }
-    updateSkillsFromPaths(skillPaths, extensionPaths = []) {
+    updateSkillsFromPaths(skillPaths, metadataByPath) {
         let skillsResult;
         if (this.noSkills && skillPaths.length === 0) {
             skillsResult = { skills: [], diagnostics: [] };
@@ -279,14 +355,15 @@ export class DefaultResourceLoader {
             });
         }
         const resolvedSkills = this.skillsOverride ? this.skillsOverride(skillsResult) : skillsResult;
-        this.skills = resolvedSkills.skills;
+        this.skills = resolvedSkills.skills.map((skill) => ({
+            ...skill,
+            sourceInfo: this.findSourceInfoForPath(skill.filePath, this.extensionSkillSourceInfos, metadataByPath) ??
+                skill.sourceInfo ??
+                this.getDefaultSourceInfoForPath(skill.filePath),
+        }));
         this.skillDiagnostics = resolvedSkills.diagnostics;
-        this.applyExtensionMetadata(extensionPaths, this.skills.map((skill) => skill.filePath));
-        for (const skill of this.skills) {
-            this.addDefaultMetadataForPath(skill.filePath);
-        }
     }
-    updatePromptsFromPaths(promptPaths, extensionPaths = []) {
+    updatePromptsFromPaths(promptPaths, metadataByPath) {
         let promptsResult;
         if (this.noPromptTemplates && promptPaths.length === 0) {
             promptsResult = { prompts: [], diagnostics: [] };
@@ -301,14 +378,15 @@ export class DefaultResourceLoader {
             promptsResult = this.dedupePrompts(allPrompts);
         }
         const resolvedPrompts = this.promptsOverride ? this.promptsOverride(promptsResult) : promptsResult;
-        this.prompts = resolvedPrompts.prompts;
+        this.prompts = resolvedPrompts.prompts.map((prompt) => ({
+            ...prompt,
+            sourceInfo: this.findSourceInfoForPath(prompt.filePath, this.extensionPromptSourceInfos, metadataByPath) ??
+                prompt.sourceInfo ??
+                this.getDefaultSourceInfoForPath(prompt.filePath),
+        }));
         this.promptDiagnostics = resolvedPrompts.diagnostics;
-        this.applyExtensionMetadata(extensionPaths, this.prompts.map((prompt) => prompt.filePath));
-        for (const prompt of this.prompts) {
-            this.addDefaultMetadataForPath(prompt.filePath);
-        }
     }
-    updateThemesFromPaths(themePaths, extensionPaths = []) {
+    updateThemesFromPaths(themePaths, metadataByPath) {
         let themesResult;
         if (this.noThemes && themePaths.length === 0) {
             themesResult = { themes: [], diagnostics: [] };
@@ -319,48 +397,111 @@ export class DefaultResourceLoader {
             themesResult = { themes: deduped.themes, diagnostics: [...loaded.diagnostics, ...deduped.diagnostics] };
         }
         const resolvedThemes = this.themesOverride ? this.themesOverride(themesResult) : themesResult;
-        this.themes = resolvedThemes.themes;
+        this.themes = resolvedThemes.themes.map((theme) => {
+            const sourcePath = theme.sourcePath;
+            theme.sourceInfo = sourcePath
+                ? (this.findSourceInfoForPath(sourcePath, this.extensionThemeSourceInfos, metadataByPath) ??
+                    theme.sourceInfo ??
+                    this.getDefaultSourceInfoForPath(sourcePath))
+                : theme.sourceInfo;
+            return theme;
+        });
         this.themeDiagnostics = resolvedThemes.diagnostics;
-        const themePathsWithSource = this.themes.flatMap((theme) => (theme.sourcePath ? [theme.sourcePath] : []));
-        this.applyExtensionMetadata(extensionPaths, themePathsWithSource);
-        for (const theme of this.themes) {
-            if (theme.sourcePath) {
-                this.addDefaultMetadataForPath(theme.sourcePath);
+    }
+    applyExtensionSourceInfo(extensions, metadataByPath) {
+        for (const extension of extensions) {
+            extension.sourceInfo =
+                this.findSourceInfoForPath(extension.path, undefined, metadataByPath) ??
+                    this.getDefaultSourceInfoForPath(extension.path);
+            for (const command of extension.commands.values()) {
+                command.sourceInfo = extension.sourceInfo;
+            }
+            for (const tool of extension.tools.values()) {
+                tool.sourceInfo = extension.sourceInfo;
             }
         }
     }
-    applyExtensionMetadata(extensionPaths, resourcePaths) {
-        if (extensionPaths.length === 0) {
-            return;
+    findSourceInfoForPath(resourcePath, extraSourceInfos, metadataByPath) {
+        if (!resourcePath) {
+            return undefined;
         }
-        const normalized = extensionPaths.map((entry) => ({
-            path: resolve(entry.path),
-            metadata: entry.metadata,
-        }));
-        for (const entry of normalized) {
-            if (!this.pathMetadata.has(entry.path)) {
-                this.pathMetadata.set(entry.path, entry.metadata);
+        if (resourcePath.startsWith("<")) {
+            return this.getDefaultSourceInfoForPath(resourcePath);
+        }
+        const normalizedResourcePath = resolve(resourcePath);
+        if (extraSourceInfos) {
+            for (const [sourcePath, sourceInfo] of extraSourceInfos.entries()) {
+                const normalizedSourcePath = resolve(sourcePath);
+                if (normalizedResourcePath === normalizedSourcePath ||
+                    normalizedResourcePath.startsWith(`${normalizedSourcePath}${sep}`)) {
+                    return { ...sourceInfo, path: resourcePath };
+                }
             }
         }
-        for (const resourcePath of resourcePaths) {
-            const normalizedResourcePath = resolve(resourcePath);
-            if (this.pathMetadata.has(normalizedResourcePath) || this.pathMetadata.has(resourcePath)) {
-                continue;
+        if (metadataByPath) {
+            const exact = metadataByPath.get(normalizedResourcePath) ?? metadataByPath.get(resourcePath);
+            if (exact) {
+                return createSourceInfo(resourcePath, exact);
             }
-            const match = normalized.find((entry) => normalizedResourcePath === entry.path || normalizedResourcePath.startsWith(`${entry.path}${sep}`));
-            if (match) {
-                this.pathMetadata.set(normalizedResourcePath, match.metadata);
+            for (const [sourcePath, metadata] of metadataByPath.entries()) {
+                const normalizedSourcePath = resolve(sourcePath);
+                if (normalizedResourcePath === normalizedSourcePath ||
+                    normalizedResourcePath.startsWith(`${normalizedSourcePath}${sep}`)) {
+                    return createSourceInfo(resourcePath, metadata);
+                }
             }
         }
+        return undefined;
+    }
+    getDefaultSourceInfoForPath(filePath) {
+        if (filePath.startsWith("<") && filePath.endsWith(">")) {
+            return {
+                path: filePath,
+                source: filePath.slice(1, -1).split(":")[0] || "temporary",
+                scope: "temporary",
+                origin: "top-level",
+            };
+        }
+        const normalizedPath = resolve(filePath);
+        const agentRoots = [
+            join(this.agentDir, "skills"),
+            join(this.agentDir, "prompts"),
+            join(this.agentDir, "themes"),
+            join(this.agentDir, "extensions"),
+        ];
+        const projectRoots = [
+            join(this.cwd, CONFIG_DIR_NAME, "skills"),
+            join(this.cwd, CONFIG_DIR_NAME, "prompts"),
+            join(this.cwd, CONFIG_DIR_NAME, "themes"),
+            join(this.cwd, CONFIG_DIR_NAME, "extensions"),
+        ];
+        for (const root of agentRoots) {
+            if (this.isUnderPath(normalizedPath, root)) {
+                return { path: filePath, source: "local", scope: "user", origin: "top-level", baseDir: root };
+            }
+        }
+        for (const root of projectRoots) {
+            if (this.isUnderPath(normalizedPath, root)) {
+                return { path: filePath, source: "local", scope: "project", origin: "top-level", baseDir: root };
+            }
+        }
+        return {
+            path: filePath,
+            source: "local",
+            scope: "temporary",
+            origin: "top-level",
+            baseDir: statSync(normalizedPath).isDirectory() ? normalizedPath : resolve(normalizedPath, ".."),
+        };
     }
     mergePaths(primary, additional) {
         const merged = [];
         const seen = new Set();
         for (const p of [...primary, ...additional]) {
             const resolved = this.resolveResourcePath(p);
-            if (seen.has(resolved))
+            const canonicalPath = canonicalizePath(resolved);
+            if (seen.has(canonicalPath))
                 continue;
-            seen.add(resolved);
+            seen.add(canonicalPath);
             merged.push(resolved);
         }
         return merged;
@@ -539,39 +680,6 @@ export class DefaultResourceLoader {
         }
         return undefined;
     }
-    addDefaultMetadataForPath(filePath) {
-        if (!filePath || filePath.startsWith("<")) {
-            return;
-        }
-        const normalizedPath = resolve(filePath);
-        if (this.pathMetadata.has(normalizedPath) || this.pathMetadata.has(filePath)) {
-            return;
-        }
-        const agentRoots = [
-            join(this.agentDir, "skills"),
-            join(this.agentDir, "prompts"),
-            join(this.agentDir, "themes"),
-            join(this.agentDir, "extensions"),
-        ];
-        const projectRoots = [
-            join(this.cwd, CONFIG_DIR_NAME, "skills"),
-            join(this.cwd, CONFIG_DIR_NAME, "prompts"),
-            join(this.cwd, CONFIG_DIR_NAME, "themes"),
-            join(this.cwd, CONFIG_DIR_NAME, "extensions"),
-        ];
-        for (const root of agentRoots) {
-            if (this.isUnderPath(normalizedPath, root)) {
-                this.pathMetadata.set(normalizedPath, { source: "local", scope: "user", origin: "top-level" });
-                return;
-            }
-        }
-        for (const root of projectRoots) {
-            if (this.isUnderPath(normalizedPath, root)) {
-                this.pathMetadata.set(normalizedPath, { source: "local", scope: "project", origin: "top-level" });
-                return;
-            }
-        }
-    }
     isUnderPath(target, root) {
         const normalizedRoot = resolve(root);
         if (target === normalizedRoot) {
@@ -582,9 +690,8 @@ export class DefaultResourceLoader {
     }
     detectExtensionConflicts(extensions) {
         const conflicts = [];
-        // Track which extension registered each tool, command, and flag
+        // Track which extension registered each tool and flag
         const toolOwners = new Map();
-        const commandOwners = new Map();
         const flagOwners = new Map();
         for (const ext of extensions) {
             // Check tools
@@ -600,19 +707,6 @@ export class DefaultResourceLoader {
                     toolOwners.set(toolName, ext.path);
                 }
             }
-            // Check commands
-            for (const commandName of ext.commands.keys()) {
-                const existingOwner = commandOwners.get(commandName);
-                if (existingOwner && existingOwner !== ext.path) {
-                    conflicts.push({
-                        path: ext.path,
-                        message: `Command "/${commandName}" conflicts with ${existingOwner}`,
-                    });
-                }
-                else {
-                    commandOwners.set(commandName, ext.path);
-                }
-            }
             // Check flags
             for (const flagName of ext.flags.keys()) {
                 const existingOwner = flagOwners.get(flagName);