@pharmatools/pubcrawl 2.5.1 → 2.6.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +21 -6
- package/dist/lib/label-mapping.d.ts +10 -0
- package/dist/lib/label-mapping.d.ts.map +1 -1
- package/dist/lib/label-mapping.js +38 -7
- package/dist/lib/label-mapping.js.map +1 -1
- package/dist/tools/compare-labels.d.ts +26 -2
- package/dist/tools/compare-labels.d.ts.map +1 -1
- package/dist/tools/compare-labels.js +71 -21
- package/dist/tools/compare-labels.js.map +1 -1
- package/dist/tools/search-indication.d.ts +9 -0
- package/dist/tools/search-indication.d.ts.map +1 -1
- package/dist/tools/search-indication.js +20 -12
- package/dist/tools/search-indication.js.map +1 -1
- package/dist/tools/smpc.d.ts.map +1 -1
- package/dist/tools/smpc.js +2 -1
- package/dist/tools/smpc.js.map +1 -1
- package/dist/tools/uspi.d.ts.map +1 -1
- package/dist/tools/uspi.js +2 -1
- package/dist/tools/uspi.js.map +1 -1
- package/dist/types.d.ts +34 -0
- package/dist/types.d.ts.map +1 -1
- package/package.json +2 -1
- package/server.json +2 -2
package/README.md
CHANGED
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@@ -13,6 +13,7 @@ _A peer-reviewed pub crawl through the literature — the label — and the tria
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[](https://www.npmjs.com/package/@pharmatools/pubcrawl)
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[](https://nodejs.org)
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[](https://registry.modelcontextprotocol.io/?q=pubcrawl)
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[](https://doi.org/10.5281/zenodo.22101559)
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[](LICENSE)
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[](CONTRIBUTING.md)
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@@ -32,6 +33,8 @@ Every tool is a thin, deterministic wrapper over an official API. Nothing is inv
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Ask **"compare US and UK labelling for semaglutide"** and PubCrawl pulls both live labels and maps equivalent sections — US *Indications and Usage* ↔ UK *4.1 Therapeutic indications*, and so on — so the differences are visible instead of assumed:
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| | US Prescribing Information | UK SmPC |
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|---|---|---|
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| **Indications** | glycaemic control · **reduce risk of MACE** in T2D with established CVD · **reduce risk of sustained eGFR decline, ESKD and CV death** in T2D with CKD | glycaemic control only — CV and renal outcomes appear as cross-references to §4.4/4.5/5.1, *not* as indications |
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@@ -45,7 +48,7 @@ A cardiovascular claim that is on-label in the US promotes an unlicensed indicat
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- 🧾 **Verifiable by design** — results link back to DailyMed, the eMC, PubMed, and ClinicalTrials.gov
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- 📰 **Preprints** via Europe PMC — surface work ahead of formal publication
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- 🆓 **No API keys required** (an optional free NCBI key raises PubMed rate limits)
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- 🧪 Fully **typed, tested, and CI-checked** — retrieval
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- 🧪 Fully **typed, tested, and CI-checked** — literature retrieval gated by [OpenGATE](https://github.com/nickjlamb/opengate), and labelling & trials by the in-repo [fidelity benchmark](benchmark/README.md), on every release
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Built by [PharmaTools.AI](https://pharmatools.ai).
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@@ -102,7 +105,7 @@ That's it. → [More examples](#-examples) · [API key & other options](#-config
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| `resolve_drug_name` | Convert a brand drug name to its generic (or a generic to its US brand names), with drug class and common indications. Deterministic, via RxNorm/openFDA — no AI. |
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| `get_uspi` | Pull US Prescribing Information sections via openFDA (cited to DailyMed) — indications, dosing, warnings, contraindications, and more. |
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| `get_smpc` | Retrieve UK Summary of Product Characteristics from the eMC — the UK equivalent of US prescribing information, with numbered SmPC sections. |
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| `compare_labels` | Side-by-side comparison of US (USPI) and UK (SmPC) labelling for the same drug.
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| `compare_labels` | Side-by-side comparison of US (USPI) and UK (SmPC) labelling for the same drug, pairing equivalent sections (US Indications ↔ UK 4.1). A missing side is always explained, cut sections are flagged `truncated`, and `us_drug` / `uk_drug` pin a different name per market (Farxiga / Forxiga). |
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| `search_by_indication` | Find drugs approved for a medical condition. Searches FDA labelling via openFDA, then cross-references UK availability on the eMC. |
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### 🧫 Clinical trials
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@@ -226,7 +229,16 @@ npm test # Vitest unit suite
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npm run lint # ESLint
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```
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Unit tests live in `tests/` and cover the parsing, caching, citation, and
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Unit tests live in `tests/` and cover the parsing, caching, citation, formatting and label-pairing logic with fixture payloads (no network calls). CI runs lint → test → build on every push and pull request. New to the codebase? Start with [`CONTRIBUTING.md`](CONTRIBUTING.md).
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### Measuring fidelity
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```bash
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npm run bench # labelling + trials fidelity benchmark against the live sources
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npm run bench -- --ci # what the release gate runs: exit 1 if a verified case fails
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```
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Two gates run on every release and weekly. [OpenGATE](https://github.com/nickjlamb/opengate)'s retrieval scorer checks PubMed and Europe PMC records against hand-verified anchors. The in-repo [fidelity benchmark](benchmark/README.md) does the same for drug labelling and trials: `compare_labels` is held to a gold set of US/UK anchors (a phrase must appear on one side and must *not* on the other, so real divergences are surfaced rather than smoothed over) plus a verbatim check that refetches the raw openFDA record and eMC page and confirms every returned sentence is a substring of the source. No LLM judge anywhere in either gate.
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---
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@@ -244,9 +256,12 @@ If PubCrawl supports work you publish, please cite it — see [`CITATION.cff`](C
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```bibtex
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@software{lamb_pubcrawl,
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-
author
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title
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author = {Lamb, Nick},
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title = {PubCrawl: verifiable biomedical literature, drug labelling and clinical trials for AI assistants},
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year = {2026},
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publisher = {Zenodo},
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doi = {10.5281/zenodo.22101559},
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url = {https://doi.org/10.5281/zenodo.22101559}
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}
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```
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@@ -5,4 +5,14 @@ export interface SectionMapping {
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}
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export declare const SECTION_MAP: SectionMapping[];
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export declare function filterSectionMap(requestedTopics?: string[]): SectionMapping[];
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/**
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* The shared engine caps each section's text (currently 1,400 characters) and
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* appends " …" when it does. Mark those sections so callers know the text is
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* verbatim but incomplete.
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*/
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export declare function markTruncated<T extends {
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content: string;
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}>(sections: T[]): (T & {
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truncated?: boolean;
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})[];
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//# sourceMappingURL=label-mapping.d.ts.map
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@@ -1 +1 @@
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{"version":3,"file":"label-mapping.d.ts","sourceRoot":"","sources":["../../src/lib/label-mapping.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,eAAO,MAAM,WAAW,EAAE,cAAc,EAUvC,CAAC;
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{"version":3,"file":"label-mapping.d.ts","sourceRoot":"","sources":["../../src/lib/label-mapping.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,eAAO,MAAM,WAAW,EAAE,cAAc,EAUvC,CAAC;AA4BF,wBAAgB,gBAAgB,CAAC,eAAe,CAAC,EAAE,MAAM,EAAE,GAAG,cAAc,EAAE,CAG7E;AAED;;;;GAIG;AACH,wBAAgB,aAAa,CAAC,CAAC,SAAS;IAAE,OAAO,EAAE,MAAM,CAAA;CAAE,EAAE,QAAQ,EAAE,CAAC,EAAE,GAAG,CAAC,CAAC,GAAG;IAAE,SAAS,CAAC,EAAE,OAAO,CAAA;CAAE,CAAC,EAAE,CAE3G"}
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@@ -9,15 +9,46 @@ export const SECTION_MAP = [
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{ topic: "Overdosage", us_loinc: "34088-5", uk_code: "4.9" },
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{ topic: "Clinical Pharmacology", us_loinc: "34090-1", uk_code: "5.1" },
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];
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const words = (s) => s.split(/[^a-z0-9.]+/).filter(Boolean);
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/**
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* Does a requested topic name refer to this mapping?
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*
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* Matches on the whole topic, a prefix of it ("indic" -> Indications), one of
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* its words ("interactions" -> Drug Interactions), or the topic appearing as a
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* whole word in a longer request ("special warnings and precautions" ->
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* Warnings). Deliberately not a bare substring test: "indications" must not
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* also select Contraindications.
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*/
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function topicMatches(mapping, request) {
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const topic = mapping.topic.toLowerCase();
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const req = request.toLowerCase().trim();
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if (!req)
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return false;
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if (req === mapping.us_loinc || req === mapping.uk_code)
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return true;
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if (topic === req || topic.startsWith(req))
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return true;
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const topicWords = words(topic);
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const reqWords = words(req);
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if (topicWords.includes(req))
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return true;
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if (reqWords.includes(topic))
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return true;
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// whole-phrase, word-bounded containment ("warnings and precautions" ⊇ "warnings")
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const phrase = new RegExp(`(^|[^a-z0-9])${topic.replace(/[.*+?^${}()|[\]\\]/g, "\\$&")}([^a-z0-9]|$)`);
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return phrase.test(req);
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}
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export function filterSectionMap(requestedTopics) {
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return SECTION_MAP;
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return SECTION_MAP.filter((mapping) => requestedTopics.some((req) =>
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return SECTION_MAP.filter((mapping) => requestedTopics.some((req) => topicMatches(mapping, req)));
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}
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/**
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* The shared engine caps each section's text (currently 1,400 characters) and
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* appends " …" when it does. Mark those sections so callers know the text is
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* verbatim but incomplete.
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*/
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export function markTruncated(sections) {
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return sections.map((s) => (/\u2026\s*$/.test(s.content) ? { ...s, truncated: true } : s));
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}
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//# sourceMappingURL=label-mapping.js.map
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{"version":3,"file":"label-mapping.js","sourceRoot":"","sources":["../../src/lib/label-mapping.ts"],"names":[],"mappings":"AAMA,MAAM,CAAC,MAAM,WAAW,GAAqB;IAC3C,EAAE,KAAK,EAAE,aAAa,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC7D,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACxD,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,UAAU,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC1D,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,WAAW,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC3D,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,YAAY,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC5D,EAAE,KAAK,EAAE,uBAAuB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;CACxE,CAAC;AAEF,MAAM,
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{"version":3,"file":"label-mapping.js","sourceRoot":"","sources":["../../src/lib/label-mapping.ts"],"names":[],"mappings":"AAMA,MAAM,CAAC,MAAM,WAAW,GAAqB;IAC3C,EAAE,KAAK,EAAE,aAAa,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC7D,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACxD,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,UAAU,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC1D,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,WAAW,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC3D,EAAE,KAAK,EAAE,mBAAmB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IACnE,EAAE,KAAK,EAAE,YAAY,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;IAC5D,EAAE,KAAK,EAAE,uBAAuB,EAAE,QAAQ,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE;CACxE,CAAC;AAEF,MAAM,KAAK,GAAG,CAAC,CAAS,EAAY,EAAE,CAAC,CAAC,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;AAE9E;;;;;;;;GAQG;AACH,SAAS,YAAY,CAAC,OAAuB,EAAE,OAAe;IAC5D,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC;IAC1C,MAAM,GAAG,GAAG,OAAO,CAAC,WAAW,EAAE,CAAC,IAAI,EAAE,CAAC;IACzC,IAAI,CAAC,GAAG;QAAE,OAAO,KAAK,CAAC;IACvB,IAAI,GAAG,KAAK,OAAO,CAAC,QAAQ,IAAI,GAAG,KAAK,OAAO,CAAC,OAAO;QAAE,OAAO,IAAI,CAAC;IACrE,IAAI,KAAK,KAAK,GAAG,IAAI,KAAK,CAAC,UAAU,CAAC,GAAG,CAAC;QAAE,OAAO,IAAI,CAAC;IACxD,MAAM,UAAU,GAAG,KAAK,CAAC,KAAK,CAAC,CAAC;IAChC,MAAM,QAAQ,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC;IAC5B,IAAI,UAAU,CAAC,QAAQ,CAAC,GAAG,CAAC;QAAE,OAAO,IAAI,CAAC;IAC1C,IAAI,QAAQ,CAAC,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,IAAI,CAAC;IAC1C,mFAAmF;IACnF,MAAM,MAAM,GAAG,IAAI,MAAM,CAAC,gBAAgB,KAAK,CAAC,OAAO,CAAC,qBAAqB,EAAE,MAAM,CAAC,eAAe,CAAC,CAAC;IACvG,OAAO,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AAC1B,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,eAA0B;IACzD,IAAI,CAAC,eAAe,IAAI,eAAe,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,WAAW,CAAC;IACzE,OAAO,WAAW,CAAC,MAAM,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,eAAe,CAAC,IAAI,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,YAAY,CAAC,OAAO,EAAE,GAAG,CAAC,CAAC,CAAC,CAAC;AACpG,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,aAAa,CAAgC,QAAa;IACxE,OAAO,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;AAC7F,CAAC"}
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import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
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import { CompareLabelsResult } from "../types.js";
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import { CompareLabelsResult, LabelSection } from "../types.js";
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/** Minimal shape of a fetched label, as the shared engine returns it. */
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interface FetchedLabel {
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drugName: string;
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sections: LabelSection[];
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}
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/** The two fetchers, injectable so the pairing logic can be tested offline. */
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export interface LabelFetchers {
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getUsLabel: (drug: string, codes: string[]) => Promise<(FetchedLabel & {
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dailymedUrl: string;
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}) | null>;
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getUkSmpc: (drug: string, codes: string[]) => Promise<(FetchedLabel & {
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url: string;
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}) | null>;
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}
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/**
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* Build a CompareLabelsResult by fetching both labels from the shared engine and
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* pairing equivalent sections (US LOINC <-> UK section number). Cached for 24h.
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*
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* A null section is never left unexplained: the paired *_note says whether the
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* whole label was unavailable or the label was retrieved but lacks that section.
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*/
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export interface CompareNames {
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/** Name used for the US lookup; defaults to `drug`. */
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+
us?: string;
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/** Name used for the UK lookup; defaults to `drug`. */
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uk?: string;
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}
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export declare function buildCompareResult(drug: string, sections?: string[], fetchers?: LabelFetchers, names?: CompareNames): Promise<CompareLabelsResult | {
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error: string;
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}>;
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export declare function registerCompareLabelsTool(server: McpServer): void;
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export {};
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35
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//# sourceMappingURL=compare-labels.d.ts.map
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"compare-labels.d.ts","sourceRoot":"","sources":["../../src/tools/compare-labels.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAIpE,OAAO,
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1
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+
{"version":3,"file":"compare-labels.d.ts","sourceRoot":"","sources":["../../src/tools/compare-labels.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAIpE,OAAO,EACL,mBAAmB,EAEnB,YAAY,EAEb,MAAM,aAAa,CAAC;AAoBrB,yEAAyE;AACzE,UAAU,YAAY;IACpB,QAAQ,EAAE,MAAM,CAAC;IACjB,QAAQ,EAAE,YAAY,EAAE,CAAC;CAC1B;AAED,+EAA+E;AAC/E,MAAM,WAAW,aAAa;IAC5B,UAAU,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,OAAO,CAAC,CAAC,YAAY,GAAG;QAAE,WAAW,EAAE,MAAM,CAAA;KAAE,CAAC,GAAG,IAAI,CAAC,CAAC;IACxG,SAAS,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,OAAO,CAAC,CAAC,YAAY,GAAG;QAAE,GAAG,EAAE,MAAM,CAAA;KAAE,CAAC,GAAG,IAAI,CAAC,CAAC;CAChG;AAuBD;;;;;;GAMG;AACH,MAAM,WAAW,YAAY;IAC3B,uDAAuD;IACvD,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,uDAAuD;IACvD,EAAE,CAAC,EAAE,MAAM,CAAC;CACb;AAED,wBAAsB,kBAAkB,CACtC,IAAI,EAAE,MAAM,EACZ,QAAQ,CAAC,EAAE,MAAM,EAAE,EACnB,QAAQ,GAAE,aAA+B,EACzC,KAAK,GAAE,YAAiB,GACvB,OAAO,CAAC,mBAAmB,GAAG;IAAE,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAuElD;AAED,wBAAgB,yBAAyB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CA0BjE"}
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@@ -1,59 +1,109 @@
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1
1
|
import { z } from "zod";
|
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2
2
|
import { getUsLabel, getUkSmpc } from "@pharmatools/drug-data";
|
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3
3
|
import { cache, TTL } from "../lib/cache.js";
|
|
4
|
-
import { filterSectionMap } from "../lib/label-mapping.js";
|
|
4
|
+
import { filterSectionMap, markTruncated } from "../lib/label-mapping.js";
|
|
5
5
|
const schema = {
|
|
6
6
|
drug: z.string().describe("Drug name to compare across US and UK labelling"),
|
|
7
|
+
us_drug: z
|
|
8
|
+
.string()
|
|
9
|
+
.optional()
|
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10
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+
.describe("Name to use for the US lookup when it differs from `drug` (e.g. a US-only brand). Defaults to `drug`."),
|
|
11
|
+
uk_drug: z
|
|
12
|
+
.string()
|
|
13
|
+
.optional()
|
|
14
|
+
.describe("Name to use for the UK lookup when it differs from `drug` — brands often do (Farxiga/Forxiga, Prilosec/Losec). Defaults to `drug`."),
|
|
7
15
|
sections: z
|
|
8
16
|
.array(z.string())
|
|
9
17
|
.optional()
|
|
10
18
|
.describe("Specific topics to compare (e.g., ['indications', 'adverse reactions']). Compares all mapped sections if omitted."),
|
|
11
19
|
};
|
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12
|
-
|
|
13
|
-
|
|
14
|
-
|
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15
|
-
|
|
16
|
-
|
|
20
|
+
const defaultFetchers = { getUsLabel, getUkSmpc };
|
|
21
|
+
const US_UNAVAILABLE = "US label not retrieved: no openFDA/DailyMed product matched this name, or the source was unreachable. " +
|
|
22
|
+
"If the name is a brand, try resolve_drug_name and retry with the generic.";
|
|
23
|
+
const UK_UNAVAILABLE = "UK SmPC not retrieved: no eMC product matched this name (the drug may not be licensed in the UK under it), " +
|
|
24
|
+
"or the source was unreachable. If the name is a brand, try resolve_drug_name and retry with the generic.";
|
|
25
|
+
const TRUNCATED_NOTE = (side, url) => `${side} text is verbatim but cut at the engine's per-section cap (ends with …); absence of a phrase here proves nothing — read the full section at ${url ?? "the source"}`;
|
|
26
|
+
const res_us_url = (us) => us?.dailymedUrl ?? null;
|
|
27
|
+
const res_uk_url = (uk) => uk?.url ?? null;
|
|
28
|
+
function sourceStatus(label, note) {
|
|
29
|
+
if (!label || label.sections.length === 0) {
|
|
30
|
+
return { status: "unavailable", product: null, sections_returned: 0, note };
|
|
31
|
+
}
|
|
32
|
+
return { status: "ok", product: label.drugName, sections_returned: label.sections.length };
|
|
33
|
+
}
|
|
34
|
+
export async function buildCompareResult(drug, sections, fetchers = defaultFetchers, names = {}) {
|
|
17
35
|
const mappings = filterSectionMap(sections);
|
|
18
36
|
if (mappings.length === 0) {
|
|
19
37
|
return { error: "No matching section mappings found for the requested topics" };
|
|
20
38
|
}
|
|
21
|
-
const
|
|
39
|
+
const usName = names.us?.trim() || drug;
|
|
40
|
+
const ukName = names.uk?.trim() || drug;
|
|
41
|
+
const cacheKey = `compare:${usName.toLowerCase()}|${ukName.toLowerCase()}:${(sections ?? []).join(",").toLowerCase()}`;
|
|
22
42
|
const cached = cache.get(cacheKey);
|
|
23
43
|
if (cached)
|
|
24
44
|
return cached;
|
|
25
45
|
const usCodes = mappings.map((m) => m.us_loinc);
|
|
26
46
|
const ukCodes = mappings.map((m) => m.uk_code);
|
|
27
|
-
// Fetch both in parallel — allow partial results
|
|
47
|
+
// Fetch both in parallel — allow partial results. The engine already returns
|
|
48
|
+
// null on failure, so a rejection here is unexpected; treat it as unavailable.
|
|
28
49
|
const [usSettled, ukSettled] = await Promise.allSettled([
|
|
29
|
-
getUsLabel(
|
|
30
|
-
getUkSmpc(
|
|
50
|
+
fetchers.getUsLabel(usName, usCodes),
|
|
51
|
+
fetchers.getUkSmpc(ukName, ukCodes),
|
|
31
52
|
]);
|
|
32
53
|
const us = usSettled.status === "fulfilled" ? usSettled.value : null;
|
|
33
54
|
const uk = ukSettled.status === "fulfilled" ? ukSettled.value : null;
|
|
34
|
-
|
|
35
|
-
|
|
55
|
+
const usStatus = sourceStatus(us, US_UNAVAILABLE);
|
|
56
|
+
const ukStatus = sourceStatus(uk, UK_UNAVAILABLE);
|
|
57
|
+
if (usStatus.status === "unavailable" && ukStatus.status === "unavailable") {
|
|
58
|
+
return {
|
|
59
|
+
error: `No labelling retrieved for "${usName === ukName ? drug : `${usName}" (US) / "${ukName}" (UK)`}" from openFDA/DailyMed or the eMC. ` +
|
|
60
|
+
"Either no product is listed under that name in these sources (try resolve_drug_name for the generic name), " +
|
|
61
|
+
"or a source was unreachable.",
|
|
62
|
+
};
|
|
36
63
|
}
|
|
37
|
-
const usByCode = new Map((us?.sections ?? []).map((s) => [s.code, s]));
|
|
38
|
-
const ukByCode = new Map((uk?.sections ?? []).map((s) => [s.code, s]));
|
|
39
|
-
const comparisons = mappings.map((m) =>
|
|
40
|
-
|
|
41
|
-
|
|
42
|
-
|
|
43
|
-
|
|
64
|
+
const usByCode = new Map(markTruncated(us?.sections ?? []).map((s) => [s.code, s]));
|
|
65
|
+
const ukByCode = new Map(markTruncated(uk?.sections ?? []).map((s) => [s.code, s]));
|
|
66
|
+
const comparisons = mappings.map((m) => {
|
|
67
|
+
const usSection = usByCode.get(m.us_loinc) ?? null;
|
|
68
|
+
const ukSection = ukByCode.get(m.uk_code) ?? null;
|
|
69
|
+
const c = { topic: m.topic, us_section: usSection, uk_section: ukSection };
|
|
70
|
+
if (!usSection) {
|
|
71
|
+
c.us_note =
|
|
72
|
+
usStatus.status === "unavailable"
|
|
73
|
+
? "US label unavailable (see us_label.note)"
|
|
74
|
+
: `US label retrieved but has no section mapped to ${m.topic} (LOINC ${m.us_loinc})`;
|
|
75
|
+
}
|
|
76
|
+
if (!ukSection) {
|
|
77
|
+
c.uk_note =
|
|
78
|
+
ukStatus.status === "unavailable"
|
|
79
|
+
? "UK SmPC unavailable (see uk_label.note)"
|
|
80
|
+
: `UK SmPC retrieved but has no section ${m.uk_code} (${m.topic})`;
|
|
81
|
+
}
|
|
82
|
+
if (usSection?.truncated)
|
|
83
|
+
c.us_note = TRUNCATED_NOTE("US section", res_us_url(us));
|
|
84
|
+
if (ukSection?.truncated)
|
|
85
|
+
c.uk_note = TRUNCATED_NOTE("UK section", res_uk_url(uk));
|
|
86
|
+
return c;
|
|
87
|
+
});
|
|
44
88
|
const result = {
|
|
45
89
|
drug,
|
|
90
|
+
...(usName !== drug || ukName !== drug ? { lookup_names: { us: usName, uk: ukName } } : {}),
|
|
46
91
|
comparisons,
|
|
47
92
|
us_source: us?.dailymedUrl ?? null,
|
|
48
93
|
uk_source: uk?.url ?? null,
|
|
94
|
+
us_label: usStatus,
|
|
95
|
+
uk_label: ukStatus,
|
|
49
96
|
};
|
|
50
97
|
cache.set(cacheKey, result, TTL.LABEL);
|
|
51
98
|
return result;
|
|
52
99
|
}
|
|
53
100
|
export function registerCompareLabelsTool(server) {
|
|
54
|
-
server.tool("compare_labels", "Compare US FDA Prescribing Information vs UK/EU SmPC for a drug side-by-side. Maps equivalent sections (e.g., US Indications ↔ UK 4.1) and returns paired content.", schema, { readOnlyHint: true, destructiveHint: false, openWorldHint: true }, async (params) => {
|
|
101
|
+
server.tool("compare_labels", "Compare US FDA Prescribing Information vs UK/EU SmPC for a drug side-by-side. Maps equivalent sections (e.g., US Indications ↔ UK 4.1) and returns paired verbatim content. A missing side is always explained: us_label/uk_label say whether the label was retrieved, each comparison notes why a section is null, and sections cut at the engine's length cap are flagged truncated.", schema, { readOnlyHint: true, destructiveHint: false, openWorldHint: true }, async (params) => {
|
|
55
102
|
try {
|
|
56
|
-
const result = await buildCompareResult(params.drug, params.sections
|
|
103
|
+
const result = await buildCompareResult(params.drug, params.sections, defaultFetchers, {
|
|
104
|
+
us: params.us_drug,
|
|
105
|
+
uk: params.uk_drug,
|
|
106
|
+
});
|
|
57
107
|
const isError = "error" in result;
|
|
58
108
|
return {
|
|
59
109
|
content: [{ type: "text", text: JSON.stringify(result, null, 2) }],
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"compare-labels.js","sourceRoot":"","sources":["../../src/tools/compare-labels.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,UAAU,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AAC/D,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAC7C,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAC;
|
|
1
|
+
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AAM,CAAC,OAAO;aACnB,CAAC,CAAC;YACH,MAAM,OAAO,GAAG,OAAO,IAAI,MAAM,CAAC;YAClC,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,CAAC;gBAClE,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;aACtC,CAAC;QACJ,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,MAAM,OAAO,GAAG,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;YACvE,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,2BAA2B,OAAO,EAAE,EAAE,CAAC;gBACvE,OAAO,EAAE,IAAI;aACd,CAAC;QACJ,CAAC;IACH,CAAC,CACF,CAAC;AACJ,CAAC"}
|
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@@ -1,3 +1,12 @@
|
|
|
1
1
|
import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
|
|
2
|
+
import { OpenFdaDrug } from "../lib/openfda.js";
|
|
3
|
+
import { EmcSearchResult } from "../lib/emc.js";
|
|
4
|
+
import { DrugApprovalEntry } from "../types.js";
|
|
5
|
+
/**
|
|
6
|
+
* Merge openFDA hits with the eMC lookups into the final entries. Pure, so the
|
|
7
|
+
* pairing rule (UK-approved iff the eMC returned at least one product for the
|
|
8
|
+
* generic name) is unit-testable without the network.
|
|
9
|
+
*/
|
|
10
|
+
export declare function mergeIndicationResults(fdaDrugs: OpenFdaDrug[], emcResults: Map<string, EmcSearchResult[]>): DrugApprovalEntry[];
|
|
2
11
|
export declare function registerSearchIndicationTool(server: McpServer): void;
|
|
3
12
|
//# sourceMappingURL=search-indication.d.ts.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"search-indication.d.ts","sourceRoot":"","sources":["../../src/tools/search-indication.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;
|
|
1
|
+
{"version":3,"file":"search-indication.d.ts","sourceRoot":"","sources":["../../src/tools/search-indication.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AACpE,OAAO,EAAsB,WAAW,EAAE,MAAM,mBAAmB,CAAC;AACpE,OAAO,EAAa,eAAe,EAAE,MAAM,eAAe,CAAC;AAC3D,OAAO,EAAE,iBAAiB,EAA0B,MAAM,aAAa,CAAC;AAwBxE;;;;GAIG;AACH,wBAAgB,sBAAsB,CACpC,QAAQ,EAAE,WAAW,EAAE,EACvB,UAAU,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,EAAE,CAAC,GACzC,iBAAiB,EAAE,CAarB;AAOD,wBAAgB,4BAA4B,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAkDpE"}
|
|
@@ -17,6 +17,25 @@ async function batchEmcLookups(drugNames) {
|
|
|
17
17
|
}
|
|
18
18
|
return results;
|
|
19
19
|
}
|
|
20
|
+
/**
|
|
21
|
+
* Merge openFDA hits with the eMC lookups into the final entries. Pure, so the
|
|
22
|
+
* pairing rule (UK-approved iff the eMC returned at least one product for the
|
|
23
|
+
* generic name) is unit-testable without the network.
|
|
24
|
+
*/
|
|
25
|
+
export function mergeIndicationResults(fdaDrugs, emcResults) {
|
|
26
|
+
return fdaDrugs.map((fda) => {
|
|
27
|
+
const emcMatches = emcResults.get(fda.generic_name);
|
|
28
|
+
return {
|
|
29
|
+
name: fda.generic_name.toLowerCase(),
|
|
30
|
+
brand_name: fda.brand_name,
|
|
31
|
+
manufacturer: fda.manufacturer,
|
|
32
|
+
us_approved: true,
|
|
33
|
+
uk_approved: emcMatches !== undefined && emcMatches.length > 0,
|
|
34
|
+
us_setid: fda.set_id || undefined,
|
|
35
|
+
uk_product_id: emcMatches?.[0]?.product_id,
|
|
36
|
+
};
|
|
37
|
+
});
|
|
38
|
+
}
|
|
20
39
|
const schema = {
|
|
21
40
|
condition: z.string().describe("Medical condition or indication to search for (e.g., 'type 2 diabetes', 'hypertension')"),
|
|
22
41
|
maxResults: z.number().min(1).max(50).default(10).describe("Maximum number of drug results to return"),
|
|
@@ -41,18 +60,7 @@ export function registerSearchIndicationTool(server) {
|
|
|
41
60
|
const genericNames = fdaDrugs.map((d) => d.generic_name);
|
|
42
61
|
const emcResults = await batchEmcLookups(genericNames);
|
|
43
62
|
// Step 3: Merge into final results
|
|
44
|
-
const drugs = fdaDrugs
|
|
45
|
-
const emcMatches = emcResults.get(fda.generic_name);
|
|
46
|
-
return {
|
|
47
|
-
name: fda.generic_name.toLowerCase(),
|
|
48
|
-
brand_name: fda.brand_name,
|
|
49
|
-
manufacturer: fda.manufacturer,
|
|
50
|
-
us_approved: true,
|
|
51
|
-
uk_approved: emcMatches !== undefined,
|
|
52
|
-
us_setid: fda.set_id || undefined,
|
|
53
|
-
uk_product_id: emcMatches?.[0]?.product_id,
|
|
54
|
-
};
|
|
55
|
-
});
|
|
63
|
+
const drugs = mergeIndicationResults(fdaDrugs, emcResults);
|
|
56
64
|
const result = {
|
|
57
65
|
condition: params.condition,
|
|
58
66
|
drugs: drugs.slice(0, params.maxResults),
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"search-indication.js","sourceRoot":"","sources":["../../src/tools/search-indication.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,kBAAkB,
|
|
1
|
+
{"version":3,"file":"search-indication.js","sourceRoot":"","sources":["../../src/tools/search-indication.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,kBAAkB,EAAe,MAAM,mBAAmB,CAAC;AACpE,OAAO,EAAE,SAAS,EAAmB,MAAM,eAAe,CAAC;AAG3D,MAAM,kBAAkB,GAAG,CAAC,CAAC;AAE7B,KAAK,UAAU,eAAe,CAC5B,SAAmB;IAEnB,MAAM,OAAO,GAAG,IAAI,GAAG,EAA6B,CAAC;IACrD,wCAAwC;IACxC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC,IAAI,kBAAkB,EAAE,CAAC;QAC9D,MAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,kBAAkB,CAAC,CAAC;QACzD,MAAM,OAAO,GAAG,MAAM,OAAO,CAAC,UAAU,CACtC,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,CACrC,CAAC;QACF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;YACtC,MAAM,OAAO,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;YAC3B,IAAI,OAAO,CAAC,MAAM,KAAK,WAAW,IAAI,OAAO,CAAC,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;gBAC/D,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,OAAO,CAAC,KAAK,CAAC,CAAC;YACvC,CAAC;QACH,CAAC;IACH,CAAC;IACD,OAAO,OAAO,CAAC;AACjB,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,sBAAsB,CACpC,QAAuB,EACvB,UAA0C;IAE1C,OAAO,QAAQ,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,EAAE;QAC1B,MAAM,UAAU,GAAG,UAAU,CAAC,GAAG,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;QACpD,OAAO;YACL,IAAI,EAAE,GAAG,CAAC,YAAY,CAAC,WAAW,EAAE;YACpC,UAAU,EAAE,GAAG,CAAC,UAAU;YAC1B,YAAY,EAAE,GAAG,CAAC,YAAY;YAC9B,WAAW,EAAE,IAAI;YACjB,WAAW,EAAE,UAAU,KAAK,SAAS,IAAI,UAAU,CAAC,MAAM,GAAG,CAAC;YAC9D,QAAQ,EAAE,GAAG,CAAC,MAAM,IAAI,SAAS;YACjC,aAAa,EAAE,UAAU,EAAE,CAAC,CAAC,CAAC,EAAE,UAAU;SAC3C,CAAC;IACJ,CAAC,CAAC,CAAC;AACL,CAAC;AAED,MAAM,MAAM,GAAG;IACb,SAAS,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,yFAAyF,CAAC;IACzH,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,QAAQ,CAAC,0CAA0C,CAAC;CACvG,CAAC;AAEF,MAAM,UAAU,4BAA4B,CAAC,MAAiB;IAC5D,MAAM,CAAC,IAAI,CACT,sBAAsB,EACtB,kJAAkJ,EAClJ,MAAM,EACN,EAAE,YAAY,EAAE,IAAI,EAAE,eAAe,EAAE,KAAK,EAAE,aAAa,EAAE,IAAI,EAAE,EACnE,KAAK,EAAE,MAAM,EAAE,EAAE;QACf,IAAI,CAAC;YACH,wDAAwD;YACxD,MAAM,QAAQ,GAAG,MAAM,kBAAkB,CACvC,MAAM,CAAC,SAAS,EAChB,MAAM,CAAC,UAAU,CAClB,CAAC;YAEF,IAAI,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;gBAC1B,OAAO;oBACL,OAAO,EAAE,CAAC;4BACR,IAAI,EAAE,MAAM;4BACZ,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC;gCACnB,KAAK,EAAE,uBAAuB,MAAM,CAAC,SAAS,oBAAoB;6BACnE,EAAE,IAAI,EAAE,CAAC,CAAC;yBACZ,CAAC;oBACF,OAAO,EAAE,IAAI;iBACd,CAAC;YACJ,CAAC;YAED,sEAAsE;YACtE,MAAM,YAAY,GAAG,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC;YACzD,MAAM,UAAU,GAAG,MAAM,eAAe,CAAC,YAAY,CAAC,CAAC;YAEvD,mCAAmC;YACnC,MAAM,KAAK,GAAG,sBAAsB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;YAE3D,MAAM,MAAM,GAA2B;gBACrC,SAAS,EAAE,MAAM,CAAC,SAAS;gBAC3B,KAAK,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;aACzC,CAAC;YAEF,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,CAAC;aACnE,CAAC;QACJ,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,MAAM,OAAO,GAAG,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;YACvE,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,kCAAkC,OAAO,EAAE,EAAE,CAAC;gBAC9E,OAAO,EAAE,IAAI;aACd,CAAC;QACJ,CAAC;IACH,CAAC,CACF,CAAC;AACJ,CAAC"}
|
package/dist/tools/smpc.d.ts.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"smpc.d.ts","sourceRoot":"","sources":["../../src/tools/smpc.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;
|
|
1
|
+
{"version":3,"file":"smpc.d.ts","sourceRoot":"","sources":["../../src/tools/smpc.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAIpE,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAYzC;;;GAGG;AACH,wBAAsB,eAAe,CACnC,IAAI,EAAE,MAAM,EACZ,QAAQ,CAAC,EAAE,MAAM,EAAE,GAClB,OAAO,CAAC,UAAU,GAAG;IAAE,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAkBzC;AAED,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAuBxD"}
|
package/dist/tools/smpc.js
CHANGED
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
import { z } from "zod";
|
|
2
2
|
import { getUkSmpc } from "@pharmatools/drug-data";
|
|
3
3
|
import { cache, TTL } from "../lib/cache.js";
|
|
4
|
+
import { markTruncated } from "../lib/label-mapping.js";
|
|
4
5
|
const schema = {
|
|
5
6
|
drug: z.string().describe("Drug name to look up (e.g., 'metformin', 'atorvastatin')"),
|
|
6
7
|
sections: z
|
|
@@ -24,7 +25,7 @@ export async function buildSmpcResult(drug, sections) {
|
|
|
24
25
|
const result = {
|
|
25
26
|
drug_name: smpc.drugName,
|
|
26
27
|
product_id: smpc.productId,
|
|
27
|
-
sections: smpc.sections,
|
|
28
|
+
sections: markTruncated(smpc.sections),
|
|
28
29
|
url: smpc.url,
|
|
29
30
|
};
|
|
30
31
|
cache.set(cacheKey, result, TTL.LABEL);
|
package/dist/tools/smpc.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"smpc.js","sourceRoot":"","sources":["../../src/tools/smpc.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AACnD,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;
|
|
1
|
+
{"version":3,"file":"smpc.js","sourceRoot":"","sources":["../../src/tools/smpc.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AACnD,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAC7C,OAAO,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAC;AAGxD,MAAM,MAAM,GAAG;IACb,IAAI,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,0DAA0D,CAAC;IACrF,QAAQ,EAAE,CAAC;SACR,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;SACjB,QAAQ,EAAE;SACV,QAAQ,CACP,0HAA0H,CAC3H;CACJ,CAAC;AAEF;;;GAGG;AACH,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,IAAY,EACZ,QAAmB;IAEnB,MAAM,QAAQ,GAAG,QAAQ,IAAI,CAAC,WAAW,EAAE,IAAI,CAAC,QAAQ,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,WAAW,EAAE,EAAE,CAAC;IAC1F,MAAM,MAAM,GAAG,KAAK,CAAC,GAAG,CAAa,QAAQ,CAAC,CAAC;IAC/C,IAAI,MAAM;QAAE,OAAO,MAAM,CAAC;IAE1B,MAAM,IAAI,GAAG,MAAM,SAAS,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC;IAC7C,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACxC,OAAO,EAAE,KAAK,EAAE,sBAAsB,IAAI,UAAU,EAAE,CAAC;IACzD,CAAC;IAED,MAAM,MAAM,GAAe;QACzB,SAAS,EAAE,IAAI,CAAC,QAAQ;QACxB,UAAU,EAAE,IAAI,CAAC,SAAS;QAC1B,QAAQ,EAAE,aAAa,CAAC,IAAI,CAAC,QAAQ,CAAC;QACtC,GAAG,EAAE,IAAI,CAAC,GAAG;KACd,CAAC;IACF,KAAK,CAAC,GAAG,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC;IACvC,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,MAAiB;IAChD,MAAM,CAAC,IAAI,CACT,UAAU,EACV,oIAAoI,EACpI,MAAM,EACN,EAAE,YAAY,EAAE,IAAI,EAAE,eAAe,EAAE,KAAK,EAAE,aAAa,EAAE,IAAI,EAAE,EACnE,KAAK,EAAE,MAAM,EAAE,EAAE;QACf,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,MAAM,eAAe,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,CAAC,QAAQ,CAAC,CAAC;YACnE,MAAM,OAAO,GAAG,OAAO,IAAI,MAAM,CAAC;YAClC,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,CAAC;gBAClE,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;aACtC,CAAC;QACJ,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,MAAM,OAAO,GAAG,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;YACvE,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,wBAAwB,OAAO,EAAE,EAAE,CAAC;gBACpE,OAAO,EAAE,IAAI;aACd,CAAC;QACJ,CAAC;IACH,CAAC,CACF,CAAC;AACJ,CAAC"}
|
package/dist/tools/uspi.d.ts.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"uspi.d.ts","sourceRoot":"","sources":["../../src/tools/uspi.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;
|
|
1
|
+
{"version":3,"file":"uspi.d.ts","sourceRoot":"","sources":["../../src/tools/uspi.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAIpE,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAYzC;;;;GAIG;AACH,wBAAsB,eAAe,CACnC,IAAI,EAAE,MAAM,EACZ,QAAQ,CAAC,EAAE,MAAM,EAAE,GAClB,OAAO,CAAC,UAAU,GAAG;IAAE,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAoBzC;AAED,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,GAAG,IAAI,CAuBxD"}
|
package/dist/tools/uspi.js
CHANGED
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
import { z } from "zod";
|
|
2
2
|
import { getUsLabel } from "@pharmatools/drug-data";
|
|
3
3
|
import { cache, TTL } from "../lib/cache.js";
|
|
4
|
+
import { markTruncated } from "../lib/label-mapping.js";
|
|
4
5
|
const schema = {
|
|
5
6
|
drug: z.string().describe("Drug name to look up (e.g., 'metformin', 'atorvastatin')"),
|
|
6
7
|
sections: z
|
|
@@ -27,7 +28,7 @@ export async function buildUspiResult(drug, sections) {
|
|
|
27
28
|
setid: label.setId,
|
|
28
29
|
spl_version: "",
|
|
29
30
|
published_date: label.publishedDate,
|
|
30
|
-
sections: label.sections,
|
|
31
|
+
sections: markTruncated(label.sections),
|
|
31
32
|
dailymed_url: label.dailymedUrl,
|
|
32
33
|
};
|
|
33
34
|
cache.set(cacheKey, result, TTL.LABEL);
|
package/dist/tools/uspi.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"uspi.js","sourceRoot":"","sources":["../../src/tools/uspi.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,UAAU,EAAE,MAAM,wBAAwB,CAAC;AACpD,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;
|
|
1
|
+
{"version":3,"file":"uspi.js","sourceRoot":"","sources":["../../src/tools/uspi.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAExB,OAAO,EAAE,UAAU,EAAE,MAAM,wBAAwB,CAAC;AACpD,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAC7C,OAAO,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAC;AAGxD,MAAM,MAAM,GAAG;IACb,IAAI,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,0DAA0D,CAAC;IACrF,QAAQ,EAAE,CAAC;SACR,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;SACjB,QAAQ,EAAE;SACV,QAAQ,CACP,mIAAmI,CACpI;CACJ,CAAC;AAEF;;;;GAIG;AACH,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,IAAY,EACZ,QAAmB;IAEnB,MAAM,QAAQ,GAAG,QAAQ,IAAI,CAAC,WAAW,EAAE,IAAI,CAAC,QAAQ,IAAI,EAAE,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,WAAW,EAAE,EAAE,CAAC;IAC1F,MAAM,MAAM,GAAG,KAAK,CAAC,GAAG,CAAa,QAAQ,CAAC,CAAC;IAC/C,IAAI,MAAM;QAAE,OAAO,MAAM,CAAC;IAE1B,MAAM,KAAK,GAAG,MAAM,UAAU,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAC;IAC/C,IAAI,CAAC,KAAK,IAAI,KAAK,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC1C,OAAO,EAAE,KAAK,EAAE,+BAA+B,IAAI,GAAG,EAAE,CAAC;IAC3D,CAAC;IAED,MAAM,MAAM,GAAe;QACzB,SAAS,EAAE,KAAK,CAAC,QAAQ;QACzB,KAAK,EAAE,KAAK,CAAC,KAAK;QAClB,WAAW,EAAE,EAAE;QACf,cAAc,EAAE,KAAK,CAAC,aAAa;QACnC,QAAQ,EAAE,aAAa,CAAC,KAAK,CAAC,QAAQ,CAAC;QACvC,YAAY,EAAE,KAAK,CAAC,WAAW;KAChC,CAAC;IACF,KAAK,CAAC,GAAG,CAAC,QAAQ,EAAE,MAAM,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC;IACvC,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,MAAiB;IAChD,MAAM,CAAC,IAAI,CACT,UAAU,EACV,gJAAgJ,EAChJ,MAAM,EACN,EAAE,YAAY,EAAE,IAAI,EAAE,eAAe,EAAE,KAAK,EAAE,aAAa,EAAE,IAAI,EAAE,EACnE,KAAK,EAAE,MAAM,EAAE,EAAE;QACf,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,MAAM,eAAe,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,CAAC,QAAQ,CAAC,CAAC;YACnE,MAAM,OAAO,GAAG,OAAO,IAAI,MAAM,CAAC;YAClC,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,EAAE,CAAC;gBAClE,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,OAAO,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC;aACtC,CAAC;QACJ,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,MAAM,OAAO,GAAG,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;YACvE,OAAO;gBACL,OAAO,EAAE,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,wBAAwB,OAAO,EAAE,EAAE,CAAC;gBACpE,OAAO,EAAE,IAAI;aACd,CAAC;QACJ,CAAC;IACH,CAAC,CACF,CAAC;AACJ,CAAC"}
|
package/dist/types.d.ts
CHANGED
|
@@ -67,6 +67,13 @@ export interface LabelSection {
|
|
|
67
67
|
code: string;
|
|
68
68
|
title: string;
|
|
69
69
|
content: string;
|
|
70
|
+
/**
|
|
71
|
+
* True when the shared engine cut the section at its per-section character
|
|
72
|
+
* cap (content then ends with an ellipsis). The text returned is verbatim
|
|
73
|
+
* but incomplete: anything after the cut is not visible, so absence of a
|
|
74
|
+
* phrase from a truncated section proves nothing. Follow the source URL.
|
|
75
|
+
*/
|
|
76
|
+
truncated?: boolean;
|
|
70
77
|
}
|
|
71
78
|
export interface USPIResult {
|
|
72
79
|
drug_name: string;
|
|
@@ -82,16 +89,43 @@ export interface SmPCResult {
|
|
|
82
89
|
sections: LabelSection[];
|
|
83
90
|
url: string;
|
|
84
91
|
}
|
|
92
|
+
/**
|
|
93
|
+
* Whether a whole label was retrieved from its source. "unavailable" covers
|
|
94
|
+
* both "no product under that name in this market" and "source unreachable" —
|
|
95
|
+
* the shared engine returns null for either, so the note tells the caller
|
|
96
|
+
* which follow-up to try rather than pretending to know.
|
|
97
|
+
*/
|
|
98
|
+
export type LabelAvailability = "ok" | "unavailable";
|
|
99
|
+
export interface LabelSourceStatus {
|
|
100
|
+
status: LabelAvailability;
|
|
101
|
+
/** Product name as the source lists it (null when unavailable). */
|
|
102
|
+
product: string | null;
|
|
103
|
+
/** Number of mapped sections the source returned. */
|
|
104
|
+
sections_returned: number;
|
|
105
|
+
/** Present when status is "unavailable": what it can and cannot mean. */
|
|
106
|
+
note?: string;
|
|
107
|
+
}
|
|
85
108
|
export interface LabelComparison {
|
|
86
109
|
topic: string;
|
|
87
110
|
us_section: LabelSection | null;
|
|
88
111
|
uk_section: LabelSection | null;
|
|
112
|
+
/** Present when us_section is null: why (label unavailable vs section absent). */
|
|
113
|
+
us_note?: string;
|
|
114
|
+
/** Present when uk_section is null: why (label unavailable vs section absent). */
|
|
115
|
+
uk_note?: string;
|
|
89
116
|
}
|
|
90
117
|
export interface CompareLabelsResult {
|
|
91
118
|
drug: string;
|
|
119
|
+
/** Present when a per-side name override was used (e.g. Farxiga / Forxiga). */
|
|
120
|
+
lookup_names?: {
|
|
121
|
+
us: string;
|
|
122
|
+
uk: string;
|
|
123
|
+
};
|
|
92
124
|
comparisons: LabelComparison[];
|
|
93
125
|
us_source: string | null;
|
|
94
126
|
uk_source: string | null;
|
|
127
|
+
us_label: LabelSourceStatus;
|
|
128
|
+
uk_label: LabelSourceStatus;
|
|
95
129
|
}
|
|
96
130
|
export interface DrugApprovalEntry {
|
|
97
131
|
name: string;
|
package/dist/types.d.ts.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,MAAM,CAAC;IACX,MAAM,EAAE,MAAM,CAAC;IACf,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,GAAG,EAAE,MAAM,CAAC;IACZ,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,OAAO,CAAC;IACrB,cAAc,EAAE,OAAO,CAAC;IACxB,cAAc,EAAE,MAAM,CAAC;IACvB,aAAa,EAAE,OAAO,CAAC;IACvB,gBAAgB,EAAE,MAAM,CAAC;IACzB,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,iBAAiB,EAAE,eAAe,EAAE,CAAC;IACrC,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,cAAc;IAC7B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,eAAe,EAAE,CAAC;IAC5B,eAAe,EAAE,MAAM,EAAE,CAAC;IAC1B,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,cAAe,SAAQ,aAAa;IACnD,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,UAAU,CAAC,CAAC;IAC3B,KAAK,EAAE,CAAC,CAAC;IACT,SAAS,EAAE,MAAM,CAAC;IAClB,GAAG,EAAE,MAAM,CAAC;CACb;AAID,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;
|
|
1
|
+
{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,MAAM,CAAC;IACX,MAAM,EAAE,MAAM,CAAC;IACf,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,GAAG,EAAE,MAAM,CAAC;IACZ,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,OAAO,CAAC;IACrB,cAAc,EAAE,OAAO,CAAC;IACxB,cAAc,EAAE,MAAM,CAAC;IACvB,aAAa,EAAE,OAAO,CAAC;IACvB,gBAAgB,EAAE,MAAM,CAAC;IACzB,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,iBAAiB,EAAE,eAAe,EAAE,CAAC;IACrC,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,cAAc;IAC7B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,QAAQ,EAAE,eAAe,EAAE,CAAC;IAC5B,eAAe,EAAE,MAAM,EAAE,CAAC;IAC1B,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,cAAe,SAAQ,aAAa;IACnD,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,UAAU,CAAC,CAAC;IAC3B,KAAK,EAAE,CAAC,CAAC;IACT,SAAS,EAAE,MAAM,CAAC;IAClB,GAAG,EAAE,MAAM,CAAC;CACb;AAID,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,MAAM,CAAC;IAChB;;;;;OAKG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;CACrB;AAED,MAAM,WAAW,UAAU;IACzB,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;IACvB,QAAQ,EAAE,YAAY,EAAE,CAAC;IACzB,YAAY,EAAE,MAAM,CAAC;CACtB;AAED,MAAM,WAAW,UAAU;IACzB,SAAS,EAAE,MAAM,CAAC;IAClB,UAAU,EAAE,MAAM,CAAC;IACnB,QAAQ,EAAE,YAAY,EAAE,CAAC;IACzB,GAAG,EAAE,MAAM,CAAC;CACb;AAED;;;;;GAKG;AACH,MAAM,MAAM,iBAAiB,GAAG,IAAI,GAAG,aAAa,CAAC;AAErD,MAAM,WAAW,iBAAiB;IAChC,MAAM,EAAE,iBAAiB,CAAC;IAC1B,mEAAmE;IACnE,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,qDAAqD;IACrD,iBAAiB,EAAE,MAAM,CAAC;IAC1B,yEAAyE;IACzE,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,UAAU,EAAE,YAAY,GAAG,IAAI,CAAC;IAChC,UAAU,EAAE,YAAY,GAAG,IAAI,CAAC;IAChC,kFAAkF;IAClF,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,kFAAkF;IAClF,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,mBAAmB;IAClC,IAAI,EAAE,MAAM,CAAC;IACb,+EAA+E;IAC/E,YAAY,CAAC,EAAE;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAA;KAAE,CAAC;IAC1C,WAAW,EAAE,eAAe,EAAE,CAAC;IAC/B,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,iBAAiB,CAAC;IAC5B,QAAQ,EAAE,iBAAiB,CAAC;CAC7B;AAED,MAAM,WAAW,iBAAiB;IAChC,IAAI,EAAE,MAAM,CAAC;IACb,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,WAAW,EAAE,OAAO,CAAC;IACrB,WAAW,EAAE,OAAO,CAAC;IACrB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED,MAAM,WAAW,sBAAsB;IACrC,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,iBAAiB,EAAE,CAAC;CAC5B;AAID,MAAM,WAAW,iBAAiB;IAChC,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd;AAED,MAAM,WAAW,oBAAoB;IACnC,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,aAAa,EAAE,iBAAiB,EAAE,CAAC;IACnC,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;IACnB,GAAG,EAAE,MAAM,CAAC;CACb;AAED,MAAM,WAAW,YAAY;IAC3B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,kBAAkB,EAAE,MAAM,EAAE,CAAC;CAC9B;AAED,MAAM,WAAW,WAAW;IAC1B,UAAU,EAAE,MAAM,CAAC;IACnB,kBAAkB,EAAE,MAAM,CAAC;IAC3B,eAAe,EAAE,MAAM,CAAC;IACxB,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,EAAE,MAAM,EAAE,CAAC;CACtB;AAED,MAAM,WAAW,mBAAoB,SAAQ,oBAAoB;IAC/D,cAAc,EAAE,MAAM,CAAC;IACvB,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE;QACX,QAAQ,EAAE,MAAM,CAAC;QACjB,MAAM,EAAE,MAAM,CAAC;QACf,WAAW,EAAE,MAAM,CAAC;QACpB,WAAW,EAAE,MAAM,CAAC;QACpB,kBAAkB,EAAE,MAAM,CAAC;KAC5B,CAAC;IACF,MAAM,EAAE,WAAW,CAAC;IACpB,IAAI,EAAE,aAAa,EAAE,CAAC;IACtB,gBAAgB,EAAE,YAAY,EAAE,CAAC;IACjC,kBAAkB,EAAE,YAAY,EAAE,CAAC;IACnC,eAAe,EAAE,MAAM,CAAC;IACxB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,gBAAgB,EAAE,MAAM,EAAE,CAAC;IAC3B,GAAG,EAAE,MAAM,CAAC;CACb"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@pharmatools/pubcrawl",
|
|
3
|
-
"version": "2.
|
|
3
|
+
"version": "2.6.0",
|
|
4
4
|
"description": "MCP server for PubMed & Europe PMC literature search, US/UK drug labelling, and clinical trials — built by PharmaTools.AI",
|
|
5
5
|
"mcpName": "io.github.nickjlamb/pubcrawl",
|
|
6
6
|
"author": "PharmaTools.AI",
|
|
@@ -34,6 +34,7 @@
|
|
|
34
34
|
"test": "vitest run",
|
|
35
35
|
"test:watch": "vitest",
|
|
36
36
|
"coverage": "vitest run --coverage",
|
|
37
|
+
"bench": "node benchmark/run.mjs",
|
|
37
38
|
"lint": "eslint .",
|
|
38
39
|
"prepublishOnly": "npm run build"
|
|
39
40
|
},
|
package/server.json
CHANGED
|
@@ -6,12 +6,12 @@
|
|
|
6
6
|
"url": "https://github.com/nickjlamb/pubcrawl",
|
|
7
7
|
"source": "github"
|
|
8
8
|
},
|
|
9
|
-
"version": "2.
|
|
9
|
+
"version": "2.6.0",
|
|
10
10
|
"packages": [
|
|
11
11
|
{
|
|
12
12
|
"registryType": "npm",
|
|
13
13
|
"identifier": "@pharmatools/pubcrawl",
|
|
14
|
-
"version": "2.
|
|
14
|
+
"version": "2.6.0",
|
|
15
15
|
"transport": {
|
|
16
16
|
"type": "stdio"
|
|
17
17
|
},
|