@pga-ai/cli 0.8.0

package/dist/commands/doctor.js

@@ -0,0 +1,223 @@
+import chalk from 'chalk';
+import ora from 'ora';
+export async function doctor(_options) {
+    console.log(chalk.bold('\n🔍 Running GSEP Diagnostics\n'));
+    const checks = [
+        { name: 'Node.js version (≥20)', check: () => checkNodeVersion() },
+        { name: 'TypeScript installed', check: () => checkTypeScript() },
+        { name: 'GSEP core package', check: () => checkPGACore() },
+        { name: 'LLM adapter packages', check: () => checkLLMAdapters() },
+        { name: 'LLM API keys configured', check: () => checkLLMApiKeys() },
+        { name: 'LLM connectivity', check: () => checkLLMConnectivity() },
+    ];
+    let passed = 0;
+    let failed = 0;
+    let warnings = 0;
+    for (const { name, check } of checks) {
+        const spinner = ora(name).start();
+        try {
+            const result = await check();
+            if (result.success) {
+                if (result.warning) {
+                    spinner.warn(chalk.yellow(`${name}: ${result.message}`));
+                    warnings++;
+                }
+                else {
+                    spinner.succeed(chalk.green(name + (result.message ? `: ${result.message}` : '')));
+                }
+                passed++;
+            }
+            else {
+                spinner.fail(chalk.red(`${name}: ${result.message}`));
+                failed++;
+            }
+        }
+        catch (error) {
+            const err = error;
+            spinner.fail(chalk.red(`${name}: ${err.message}`));
+            failed++;
+        }
+    }
+    console.log();
+    console.log(chalk.bold('Results:'));
+    console.log(chalk.green(`  ✓ Passed: ${passed}`));
+    if (warnings > 0) {
+        console.log(chalk.yellow(`  ⚠ Warnings: ${warnings}`));
+    }
+    if (failed > 0) {
+        console.log(chalk.red(`  ✗ Failed: ${failed}`));
+        console.log();
+        console.log(chalk.bold('To fix issues:'));
+        console.log(chalk.dim('  1. Install missing packages with npm install'));
+        console.log(chalk.dim('  2. Set API keys: export ANTHROPIC_API_KEY=sk-ant-...'));
+        console.log(chalk.dim('  3. Run "pga doctor" again to verify'));
+    }
+    else {
+        console.log();
+        console.log(chalk.green.bold('  ✓ All checks passed! GSEP is ready.'));
+    }
+    console.log();
+}
+function checkNodeVersion() {
+    const version = process.version;
+    const major = parseInt(version.slice(1).split('.')[0], 10);
+    if (major >= 20) {
+        return { success: true, message: version };
+    }
+    return {
+        success: false,
+        message: `Node.js ${version} detected. GSEP requires Node.js 20+. Upgrade: https://nodejs.org`,
+    };
+}
+function checkTypeScript() {
+    try {
+        require.resolve('typescript');
+        return { success: true };
+    }
+    catch {
+        return {
+            success: false,
+            message: 'TypeScript not found. Run: npm install -D typescript',
+        };
+    }
+}
+function checkPGACore() {
+    try {
+        require.resolve('@pga-ai/core');
+        return { success: true };
+    }
+    catch {
+        return {
+            success: false,
+            message: '@pga-ai/core not found. Run: npm install @pga-ai/core',
+        };
+    }
+}
+function checkLLMAdapters() {
+    const adapters = [
+        { pkg: '@pga-ai/adapters-llm-anthropic', name: 'Claude' },
+        { pkg: '@pga-ai/adapters-llm-openai', name: 'OpenAI' },
+    ];
+    const installed = [];
+    for (const adapter of adapters) {
+        try {
+            require.resolve(adapter.pkg);
+            installed.push(adapter.name);
+        }
+        catch {
+        }
+    }
+    if (installed.length > 0) {
+        return { success: true, message: installed.join(', ') };
+    }
+    return {
+        success: false,
+        message: 'No LLM adapter found. Install at least one:\n'
+            + '    npm install @pga-ai/adapters-llm-anthropic   # Claude\n'
+            + '    npm install @pga-ai/adapters-llm-openai       # GPT-4',
+    };
+}
+function checkLLMApiKeys() {
+    const providers = [
+        { key: 'ANTHROPIC_API_KEY', name: 'Anthropic (Claude)', prefix: 'sk-ant-' },
+        { key: 'OPENAI_API_KEY', name: 'OpenAI (GPT)', prefix: 'sk-' },
+    ];
+    const configured = [];
+    const issues = [];
+    for (const provider of providers) {
+        const value = process.env[provider.key];
+        if (value) {
+            if (value === `your-api-key-here` || value === 'sk-...') {
+                issues.push(`${provider.key} is set to a placeholder value`);
+            }
+            else {
+                configured.push(provider.name);
+            }
+        }
+    }
+    if (issues.length > 0) {
+        return {
+            success: true,
+            warning: true,
+            message: issues.join('; '),
+        };
+    }
+    if (configured.length > 0) {
+        return { success: true, message: configured.join(', ') };
+    }
+    return {
+        success: false,
+        message: 'No LLM API keys found. Set at least one:\n'
+            + '    export ANTHROPIC_API_KEY=sk-ant-...   # Claude\n'
+            + '    export OPENAI_API_KEY=sk-...          # GPT-4',
+    };
+}
+async function checkLLMConnectivity() {
+    const anthropicKey = process.env.ANTHROPIC_API_KEY;
+    if (anthropicKey && anthropicKey !== 'your-api-key-here') {
+        try {
+            const response = await fetch('https://api.anthropic.com/v1/messages', {
+                method: 'POST',
+                headers: {
+                    'x-api-key': anthropicKey,
+                    'anthropic-version': '2023-06-01',
+                    'content-type': 'application/json',
+                },
+                body: JSON.stringify({
+                    model: 'claude-haiku-4-5-20251001',
+                    max_tokens: 1,
+                    messages: [{ role: 'user', content: 'hi' }],
+                }),
+                signal: AbortSignal.timeout(10000),
+            });
+            if (response.ok) {
+                return { success: true, message: 'Anthropic API responding' };
+            }
+            const status = response.status;
+            if (status === 401) {
+                return { success: false, message: 'Anthropic API key is invalid (401 Unauthorized)' };
+            }
+            if (status === 429) {
+                return { success: true, warning: true, message: 'Anthropic API rate-limited (key is valid)' };
+            }
+            return { success: true, warning: true, message: `Anthropic API returned ${status}` };
+        }
+        catch (err) {
+            const error = err;
+            if (error.name === 'AbortError' || error.name === 'TimeoutError') {
+                return { success: false, message: 'Anthropic API timed out (check network)' };
+            }
+            return { success: false, message: `Anthropic API unreachable: ${error.message}` };
+        }
+    }
+    const openaiKey = process.env.OPENAI_API_KEY;
+    if (openaiKey && openaiKey !== 'your-api-key-here') {
+        try {
+            const response = await fetch('https://api.openai.com/v1/models', {
+                headers: { 'Authorization': `Bearer ${openaiKey}` },
+                signal: AbortSignal.timeout(10000),
+            });
+            if (response.ok) {
+                return { success: true, message: 'OpenAI API responding' };
+            }
+            const status = response.status;
+            if (status === 401) {
+                return { success: false, message: 'OpenAI API key is invalid (401 Unauthorized)' };
+            }
+            return { success: true, warning: true, message: `OpenAI API returned ${status}` };
+        }
+        catch (err) {
+            const error = err;
+            if (error.name === 'AbortError' || error.name === 'TimeoutError') {
+                return { success: false, message: 'OpenAI API timed out (check network)' };
+            }
+            return { success: false, message: `OpenAI API unreachable: ${error.message}` };
+        }
+    }
+    return {
+        success: true,
+        warning: true,
+        message: 'No API keys set — skipping connectivity test',
+    };
+}
+//# sourceMappingURL=doctor.js.map

package/dist/commands/doctor.js.map

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package/dist/commands/evolve.d.ts

@@ -0,0 +1,2 @@
+export declare function evolve(genomeId: string, options: any): Promise<void>;
+//# sourceMappingURL=evolve.d.ts.map

package/dist/commands/evolve.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"evolve.d.ts","sourceRoot":"","sources":["../../src/commands/evolve.ts"],"names":[],"mappings":"AAIA,wBAAsB,MAAM,CAAC,QAAQ,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,CAI1E"}

package/dist/commands/evolve.js

@@ -0,0 +1,6 @@
+export async function evolve(genomeId, options) {
+    console.log('Evolve genome command - coming soon');
+    console.log('Genome ID:', genomeId);
+    console.log('Options:', options);
+}
+//# sourceMappingURL=evolve.js.map

package/dist/commands/evolve.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"evolve.js","sourceRoot":"","sources":["../../src/commands/evolve.ts"],"names":[],"mappings":"AAIA,MAAM,CAAC,KAAK,UAAU,MAAM,CAAC,QAAgB,EAAE,OAAY;IACvD,OAAO,CAAC,GAAG,CAAC,qCAAqC,CAAC,CAAC;IACnD,OAAO,CAAC,GAAG,CAAC,YAAY,EAAE,QAAQ,CAAC,CAAC;IACpC,OAAO,CAAC,GAAG,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;AACrC,CAAC"}

package/dist/commands/export.d.ts

@@ -0,0 +1,2 @@
+export declare function exportGenome(genomeId: string, options: any): Promise<void>;
+//# sourceMappingURL=export.d.ts.map

package/dist/commands/export.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"export.d.ts","sourceRoot":"","sources":["../../src/commands/export.ts"],"names":[],"mappings":"AAIA,wBAAsB,YAAY,CAAC,QAAQ,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,CAIhF"}

package/dist/commands/export.js

@@ -0,0 +1,6 @@
+export async function exportGenome(genomeId, options) {
+    console.log('Export genome command - coming soon');
+    console.log('Genome ID:', genomeId);
+    console.log('Options:', options);
+}
+//# sourceMappingURL=export.js.map

package/dist/commands/export.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"export.js","sourceRoot":"","sources":["../../src/commands/export.ts"],"names":[],"mappings":"AAIA,MAAM,CAAC,KAAK,UAAU,YAAY,CAAC,QAAgB,EAAE,OAAY;IAC7D,OAAO,CAAC,GAAG,CAAC,qCAAqC,CAAC,CAAC;IACnD,OAAO,CAAC,GAAG,CAAC,YAAY,EAAE,QAAQ,CAAC,CAAC;IACpC,OAAO,CAAC,GAAG,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;AACrC,CAAC"}

package/dist/commands/import.d.ts

@@ -0,0 +1,2 @@
+export declare function importGenome(file: string, options: any): Promise<void>;
+//# sourceMappingURL=import.d.ts.map

package/dist/commands/import.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"import.d.ts","sourceRoot":"","sources":["../../src/commands/import.ts"],"names":[],"mappings":"AAIA,wBAAsB,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,CAI5E"}

package/dist/commands/import.js

@@ -0,0 +1,6 @@
+export async function importGenome(file, options) {
+    console.log('Import genome command - coming soon');
+    console.log('File:', file);
+    console.log('Options:', options);
+}
+//# sourceMappingURL=import.js.map

package/dist/commands/import.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"import.js","sourceRoot":"","sources":["../../src/commands/import.ts"],"names":[],"mappings":"AAIA,MAAM,CAAC,KAAK,UAAU,YAAY,CAAC,IAAY,EAAE,OAAY;IACzD,OAAO,CAAC,GAAG,CAAC,qCAAqC,CAAC,CAAC;IACnD,OAAO,CAAC,GAAG,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;IAC3B,OAAO,CAAC,GAAG,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;AACrC,CAAC"}

package/dist/commands/init.d.ts

@@ -0,0 +1,7 @@
+interface InitOptions {
+    template?: string;
+    dir?: string;
+}
+export declare function init(options: InitOptions): Promise<void>;
+export {};
+//# sourceMappingURL=init.d.ts.map

package/dist/commands/init.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAaA,UAAU,WAAW;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,GAAG,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,wBAAsB,IAAI,CAAC,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,IAAI,CAAC,CAkD9D"}