@pennyfarthing/core 9.3.0 → 10.0.0

package/dist/cli/commands/e2e-upgrade.test.js

@@ -0,0 +1,562 @@
+/**
+ * E2E test for MSSCI-14374: Existing repo upgrade
+ *
+ * This test sets up an old-style installation with files in legacy .claude/
+ * locations, runs `pennyfarthing update` to migrate, and validates that:
+ * - Files are migrated to .pennyfarthing/
+ * - Symlinks exist for Claude Code compatibility
+ * - Doctor passes after migration
+ * - Temp directory is cleaned up
+ *
+ * Acceptance Criteria:
+ * AC1: Test creates a temp directory with old-style install layout (.claude/ based)
+ * AC2: Test runs `pennyfarthing update` against the old layout
+ * AC3: Test validates files migrated to .pennyfarthing/
+ * AC4: Test validates symlinks exist for Claude Code compatibility
+ * AC5: Test runs doctor and confirms it passes
+ * AC6: Test cleans up temp directory afterward
+ *
+ * Run with: cd packages/core && npm run build && npm test
+ */
+import { describe, it, beforeEach, afterEach } from 'node:test';
+import assert from 'node:assert';
+import { existsSync, mkdirSync, rmSync, readFileSync, lstatSync, readdirSync, symlinkSync, writeFileSync, chmodSync, } from 'fs';
+import { join, resolve, dirname } from 'path';
+import { tmpdir } from 'os';
+import { execSync, spawnSync } from 'child_process';
+import { fileURLToPath } from 'url';
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = dirname(__filename);
+// Path to the CLI binary (compiled JS)
+const CLI_BIN = resolve(__dirname, '../../../bin/pennyfarthing.js');
+// Path to the real pennyfarthing-dist (for creating fake node_modules)
+// From dist/cli/commands/ → packages/core/dist/cli/commands/ → 5 levels up to repo root
+const REAL_PENNYFARTHING_DIST = resolve(__dirname, '../../../../../pennyfarthing-dist');
+// ─── Helpers ───────────────────────────────────────────────────────
+function createTestDir() {
+    const dir = join(tmpdir(), `pf-e2e-upgrade-${Date.now()}-${Math.random().toString(36).slice(2)}`);
+    mkdirSync(dir, { recursive: true });
+    return dir;
+}
+/**
+ * Create a fake node_modules tree that symlinks to the real pennyfarthing-dist.
+ * This simulates what `npm install pennyfarthing` would produce.
+ */
+function setupNodeModules(testDir) {
+    const targetDir = join(testDir, 'node_modules/@pennyfarthing/core');
+    mkdirSync(targetDir, { recursive: true });
+    // Symlink to the real pennyfarthing-dist so update can find templates, commands, etc.
+    symlinkSync(REAL_PENNYFARTHING_DIST, join(targetDir, 'pennyfarthing-dist'));
+}
+/**
+ * Initialize a git repo in the test directory so hooks can be installed.
+ */
+function initGitRepo(testDir) {
+    execSync('git init', { cwd: testDir, stdio: 'pipe' });
+    writeFileSync(join(testDir, '.gitkeep'), '');
+    execSync('git add .gitkeep && git commit -m "init"', {
+        cwd: testDir,
+        stdio: 'pipe',
+        env: {
+            ...process.env,
+            GIT_AUTHOR_NAME: 'Test',
+            GIT_AUTHOR_EMAIL: 'test@test.com',
+            GIT_COMMITTER_NAME: 'Test',
+            GIT_COMMITTER_EMAIL: 'test@test.com',
+        },
+    });
+}
+/**
+ * Run the pennyfarthing CLI in the test directory.
+ */
+function runCLI(testDir, args) {
+    const result = spawnSync('node', [CLI_BIN, ...args], {
+        cwd: testDir,
+        stdio: 'pipe',
+        timeout: 30000,
+        env: {
+            ...process.env,
+            NODE_PATH: '',
+            FORCE_COLOR: '0',
+            NO_COLOR: '1',
+        },
+    });
+    return {
+        stdout: result.stdout?.toString() || '',
+        stderr: result.stderr?.toString() || '',
+        status: result.status,
+    };
+}
+/**
+ * Extract JSON array from doctor --json output.
+ * Doctor outputs header text before the JSON array.
+ */
+function extractDoctorJson(stdout) {
+    const jsonStart = stdout.indexOf('[');
+    if (jsonStart === -1) {
+        throw new Error(`No JSON array found in doctor output: ${stdout.slice(0, 200)}`);
+    }
+    return JSON.parse(stdout.slice(jsonStart));
+}
+// ─── Constants for verification ───────────────────────────────────
+const CORE_AGENTS = [
+    'dev', 'tea', 'sm', 'reviewer', 'architect',
+    'pm', 'tech-writer', 'ux-designer', 'devops', 'orchestrator'
+];
+const DIRECTORY_SYMLINKS = [
+    { name: 'agents', link: '.pennyfarthing/agents' },
+    { name: 'guides', link: '.pennyfarthing/guides' },
+    { name: 'output-styles', link: '.pennyfarthing/output-styles' },
+    { name: 'personas', link: '.pennyfarthing/personas' },
+    { name: 'scripts', link: '.pennyfarthing/scripts' },
+    { name: 'workflows', link: '.pennyfarthing/workflows' },
+];
+// Legacy template files that should migrate from .claude/ to .pennyfarthing/
+const LEGACY_TEMPLATE_MIGRATIONS = [
+    { oldPath: '.claude/project/docs/agent-scopes.yaml', newPath: '.pennyfarthing/project/docs/agent-scopes.yaml' },
+    { oldPath: '.claude/project/hooks/setup-env.sh', newPath: '.pennyfarthing/project/hooks/setup-env.sh' },
+    { oldPath: '.claude/project/pennyfarthing-settings.yaml', newPath: '.pennyfarthing/project/pennyfarthing-settings.yaml' },
+    { oldPath: '.claude/preferences.yaml', newPath: '.pennyfarthing/preferences.yaml' },
+    { oldPath: '.claude/persona-config.yaml', newPath: '.pennyfarthing/persona-config.yaml' },
+];
+// ─── Legacy Layout Setup ──────────────────────────────────────────
+/**
+ * Create an old-style Pennyfarthing installation layout.
+ * This simulates what a pre-consolidation install looked like:
+ * - Manifest at .claude/manifest.json (legacy location)
+ * - Symlinks at .claude/{agents,guides,personas,scripts} (legacy)
+ * - Template files at .claude/ locations (legacy)
+ * - Sidecars at sprint/sidecars/ (legacy)
+ * - settings.local.json as a real file in .claude/ (not symlinked)
+ */
+function createLegacyLayout(testDir) {
+    const distPath = join(testDir, 'node_modules/@pennyfarthing/core/pennyfarthing-dist');
+    // Create required directories
+    mkdirSync(join(testDir, '.claude/project/docs'), { recursive: true });
+    mkdirSync(join(testDir, '.claude/project/hooks'), { recursive: true });
+    mkdirSync(join(testDir, '.claude/project/commands'), { recursive: true });
+    mkdirSync(join(testDir, '.claude/project/skills'), { recursive: true });
+    mkdirSync(join(testDir, '.pennyfarthing'), { recursive: true });
+    mkdirSync(join(testDir, 'sprint'), { recursive: true });
+    mkdirSync(join(testDir, '.session'), { recursive: true });
+    // 1. Legacy manifest at .claude/manifest.json
+    const manifest = {
+        version: '9.0.0', // Old version to trigger update
+        installedAt: '2025-12-01T00:00:00.000Z',
+        updatedAt: '2025-12-01T00:00:00.000Z',
+        projectName: 'test-upgrade',
+        installationType: 'symlink',
+        nodeModulesPath: 'node_modules/@pennyfarthing/core/pennyfarthing-dist',
+        managedPaths: [
+            '.claude/commands',
+            '.claude/skills',
+            '.claude/agents', // Old-style paths
+            '.claude/guides',
+            '.claude/personas',
+            '.claude/scripts',
+        ],
+        fileHashes: {},
+    };
+    writeFileSync(join(testDir, '.claude/manifest.json'), JSON.stringify(manifest, null, 2));
+    // 2. Legacy symlinks at .claude/{agents,guides,personas,scripts}
+    //    These pointed to node_modules in the old layout
+    const legacySymlinkDirs = ['agents', 'guides', 'personas', 'scripts'];
+    for (const name of legacySymlinkDirs) {
+        const sourcePath = join(distPath, name);
+        const linkPath = join(testDir, '.claude', name);
+        if (existsSync(sourcePath)) {
+            symlinkSync(sourcePath, linkPath);
+        }
+    }
+    // 3. Legacy template files at .claude/ locations
+    writeFileSync(join(testDir, '.claude/preferences.yaml'), '# User preferences\ntheme: blade-runner\n');
+    writeFileSync(join(testDir, '.claude/persona-config.yaml'), '# Persona config\nactive_theme: blade-runner\n');
+    writeFileSync(join(testDir, '.claude/project/docs/agent-scopes.yaml'), '# Agent scopes\nscopes: {}\n');
+    writeFileSync(join(testDir, '.claude/project/pennyfarthing-settings.yaml'), '# Settings\nrepos: []\n');
+    const setupEnvPath = join(testDir, '.claude/project/hooks/setup-env.sh');
+    writeFileSync(setupEnvPath, '#!/bin/bash\n# Setup env\n');
+    chmodSync(setupEnvPath, 0o755);
+    // 4. shared-context.md (user-owned, should stay at .claude/)
+    writeFileSync(join(testDir, '.claude/project/docs/shared-context.md'), '# My Project\nUser-written project description\n');
+    // 5. Legacy sidecars at sprint/sidecars/
+    for (const agent of CORE_AGENTS) {
+        const sidecarDir = join(testDir, `sprint/sidecars/${agent}`);
+        mkdirSync(sidecarDir, { recursive: true });
+        writeFileSync(join(sidecarDir, 'patterns.md'), `# ${agent} patterns\nLegacy content\n`);
+        writeFileSync(join(sidecarDir, 'gotchas.md'), `# ${agent} gotchas\nLegacy content\n`);
+        writeFileSync(join(sidecarDir, 'decisions.md'), `# ${agent} decisions\nLegacy content\n`);
+    }
+    // 6. settings.local.json as a real file (not symlinked) in .claude/
+    const settings = {
+        permissions: {
+            allow: ['Read', 'Grep', 'Glob'],
+        },
+        hooks: {
+            SessionStart: [
+                { hooks: [{ type: 'command', command: '$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/hooks/session-start.sh' }] }
+            ],
+        },
+    };
+    writeFileSync(join(testDir, '.claude/settings.local.json'), JSON.stringify(settings, null, 2));
+    // 7. Copy commands and skills as real directories (like init did)
+    //    We use the real pennyfarthing-dist as source
+    const commandsSrc = join(distPath, 'commands');
+    const skillsSrc = join(distPath, 'skills');
+    const commandsDest = join(testDir, '.claude/commands');
+    const skillsDest = join(testDir, '.claude/skills');
+    mkdirSync(commandsDest, { recursive: true });
+    mkdirSync(skillsDest, { recursive: true });
+    // Copy a few command files
+    if (existsSync(commandsSrc)) {
+        for (const file of readdirSync(commandsSrc)) {
+            const src = join(commandsSrc, file);
+            const dest = join(commandsDest, file);
+            writeFileSync(dest, readFileSync(src));
+        }
+    }
+    // Copy skill directories
+    if (existsSync(skillsSrc)) {
+        for (const entry of readdirSync(skillsSrc)) {
+            const srcDir = join(skillsSrc, entry);
+            const destDir = join(skillsDest, entry);
+            if (lstatSync(srcDir).isDirectory()) {
+                mkdirSync(destDir, { recursive: true });
+                for (const file of readdirSync(srcDir)) {
+                    const fileSrc = join(srcDir, file);
+                    if (!lstatSync(fileSrc).isDirectory()) {
+                        writeFileSync(join(destDir, file), readFileSync(fileSrc));
+                    }
+                }
+            }
+        }
+    }
+    // 8. Git hooks (these were in .git/hooks/ in old layout too)
+    const hooksDir = join(testDir, '.git/hooks');
+    mkdirSync(hooksDir, { recursive: true });
+    for (const hook of ['pre-commit', 'pre-push', 'post-merge']) {
+        const hookPath = join(hooksDir, hook);
+        writeFileSync(hookPath, '#!/bin/bash\n# pennyfarthing hook\nexit 0\n');
+        chmodSync(hookPath, 0o755);
+    }
+}
+// ─── Test Suites ──────────────────────────────────────────────────
+describe('MSSCI-14374: E2E existing repo upgrade', () => {
+    let testDir;
+    beforeEach(() => {
+        testDir = createTestDir();
+        setupNodeModules(testDir);
+        initGitRepo(testDir);
+        createLegacyLayout(testDir);
+    });
+    afterEach(() => {
+        // AC6: Cleans up the temp repo afterward
+        if (existsSync(testDir)) {
+            rmSync(testDir, { recursive: true, force: true });
+        }
+    });
+    // ─── AC1: Create old-style install layout ─────────────────────
+    describe('AC1: Test creates a temp directory with old-style install layout', () => {
+        it('should have a valid git repo with node_modules', () => {
+            assert.ok(existsSync(join(testDir, '.git')), 'Test dir should be a git repo');
+            const distPath = join(testDir, 'node_modules/@pennyfarthing/core/pennyfarthing-dist');
+            assert.ok(existsSync(distPath), 'node_modules should contain pennyfarthing-dist');
+        });
+        it('should have legacy manifest at .claude/manifest.json', () => {
+            const manifestPath = join(testDir, '.claude/manifest.json');
+            assert.ok(existsSync(manifestPath), 'Legacy manifest should exist at .claude/');
+            const manifest = JSON.parse(readFileSync(manifestPath, 'utf8'));
+            assert.strictEqual(manifest.installationType, 'symlink', 'Should be symlink type');
+            assert.strictEqual(manifest.version, '9.0.0', 'Should have old version');
+        });
+        it('should have legacy symlinks at .claude/{agents,guides,personas,scripts}', () => {
+            const legacyDirs = ['agents', 'guides', 'personas', 'scripts'];
+            for (const name of legacyDirs) {
+                const legacyPath = join(testDir, '.claude', name);
+                assert.ok(existsSync(legacyPath), `Legacy .claude/${name} should exist`);
+                assert.ok(lstatSync(legacyPath).isSymbolicLink(), `.claude/${name} should be a symlink in the legacy layout`);
+            }
+        });
+        it('should have legacy template files at .claude/ locations', () => {
+            for (const { oldPath } of LEGACY_TEMPLATE_MIGRATIONS) {
+                assert.ok(existsSync(join(testDir, oldPath)), `Legacy template ${oldPath} should exist`);
+            }
+        });
+        it('should have legacy sidecars at sprint/sidecars/', () => {
+            for (const agent of CORE_AGENTS) {
+                const sidecarDir = join(testDir, `sprint/sidecars/${agent}`);
+                assert.ok(existsSync(sidecarDir), `Legacy sidecar for ${agent} should exist`);
+                assert.ok(existsSync(join(sidecarDir, 'patterns.md')), `Legacy patterns.md for ${agent} should exist`);
+            }
+        });
+        it('should have settings.local.json as a real file (not symlink)', () => {
+            const settingsPath = join(testDir, '.claude/settings.local.json');
+            assert.ok(existsSync(settingsPath), 'settings.local.json should exist');
+            assert.ok(!lstatSync(settingsPath).isSymbolicLink(), 'settings.local.json should be a real file in legacy layout');
+        });
+    });
+    // ─── AC2: Run pennyfarthing update ────────────────────────────
+    describe('AC2: Test runs pennyfarthing update against the old layout', () => {
+        it('should complete update without error', () => {
+            const result = runCLI(testDir, ['update']);
+            assert.strictEqual(result.status, 0, `Update should exit 0, got ${result.status}.\nStdout: ${result.stdout}\nStderr: ${result.stderr}`);
+        });
+        it('should report migration activity in output', () => {
+            const result = runCLI(testDir, ['update']);
+            assert.strictEqual(result.status, 0, 'Update should succeed');
+            // Update should mention migration activity
+            const output = result.stdout + result.stderr;
+            assert.ok(output.includes('Migrated') || output.includes('Updated') || output.includes('Update'), 'Output should indicate migration/update activity');
+        });
+    });
+    // ─── AC3: Validate files migrated to .pennyfarthing/ ──────────
+    describe('AC3: Test validates files migrated to .pennyfarthing/', () => {
+        it('should migrate manifest from .claude/ to .pennyfarthing/', () => {
+            runCLI(testDir, ['update']);
+            // Manifest should now be at .pennyfarthing/
+            const newManifestPath = join(testDir, '.pennyfarthing/manifest.json');
+            assert.ok(existsSync(newManifestPath), 'Manifest should exist at .pennyfarthing/');
+            const manifest = JSON.parse(readFileSync(newManifestPath, 'utf8'));
+            assert.strictEqual(manifest.installationType, 'symlink', 'Manifest should remain symlink type');
+            assert.ok(manifest.version, 'Manifest should have a version');
+        });
+        it('should remove legacy manifest from .claude/', () => {
+            runCLI(testDir, ['update']);
+            assert.ok(!existsSync(join(testDir, '.claude/manifest.json')), 'Legacy manifest should be removed from .claude/');
+        });
+        it('should migrate template files to .pennyfarthing/', () => {
+            runCLI(testDir, ['update']);
+            for (const { oldPath, newPath } of LEGACY_TEMPLATE_MIGRATIONS) {
+                assert.ok(existsSync(join(testDir, newPath)), `Template should be migrated to ${newPath}`);
+                assert.ok(!existsSync(join(testDir, oldPath)), `Legacy template ${oldPath} should be removed after migration`);
+            }
+        });
+        it('should preserve user content in migrated template files', () => {
+            runCLI(testDir, ['update']);
+            // preferences.yaml should retain user content
+            const prefsPath = join(testDir, '.pennyfarthing/preferences.yaml');
+            const content = readFileSync(prefsPath, 'utf8');
+            assert.ok(content.includes('theme: blade-runner'), 'Migrated preferences should preserve user content');
+        });
+        it('should migrate sidecars from sprint/sidecars/ to .pennyfarthing/sidecars/', () => {
+            runCLI(testDir, ['update']);
+            for (const agent of CORE_AGENTS) {
+                const newSidecarDir = join(testDir, `.pennyfarthing/sidecars/${agent}`);
+                assert.ok(existsSync(newSidecarDir), `Sidecar for ${agent} should exist at .pennyfarthing/sidecars/`);
+                // Verify files were migrated
+                for (const file of ['patterns.md', 'gotchas.md', 'decisions.md']) {
+                    assert.ok(existsSync(join(newSidecarDir, file)), `${file} for ${agent} should exist at new location`);
+                }
+                // Verify content was preserved
+                const content = readFileSync(join(newSidecarDir, 'patterns.md'), 'utf8');
+                assert.ok(content.includes('Legacy content'), `Sidecar content for ${agent} should be preserved`);
+            }
+        });
+        it('should remove legacy sprint/sidecars/ directory after migration', () => {
+            runCLI(testDir, ['update']);
+            assert.ok(!existsSync(join(testDir, 'sprint/sidecars')), 'Legacy sprint/sidecars/ should be removed after migration');
+        });
+        it('should remove legacy .claude/{agents,guides,personas,scripts} symlinks', () => {
+            runCLI(testDir, ['update']);
+            const legacyDirs = ['agents', 'guides', 'personas', 'scripts'];
+            for (const name of legacyDirs) {
+                assert.ok(!existsSync(join(testDir, '.claude', name)), `Legacy .claude/${name} should be removed after update`);
+            }
+        });
+        it('should NOT move shared-context.md (user-owned, stays in .claude/)', () => {
+            runCLI(testDir, ['update']);
+            assert.ok(existsSync(join(testDir, '.claude/project/docs/shared-context.md')), 'shared-context.md should remain at .claude/project/docs/');
+            const content = readFileSync(join(testDir, '.claude/project/docs/shared-context.md'), 'utf8');
+            assert.ok(content.includes('User-written project description'), 'shared-context.md content should be preserved');
+        });
+        it('should migrate settings.local.json to .pennyfarthing/', () => {
+            runCLI(testDir, ['update']);
+            const pennyfarthingSettings = join(testDir, '.pennyfarthing/settings.local.json');
+            assert.ok(existsSync(pennyfarthingSettings), 'settings.local.json should exist at .pennyfarthing/');
+            // Verify settings have been merged (should include required hooks)
+            const settings = JSON.parse(readFileSync(pennyfarthingSettings, 'utf8'));
+            assert.ok(settings.hooks, 'Migrated settings should have hooks');
+            assert.ok(settings.hooks.SessionStart, 'Should have SessionStart hooks');
+        });
+        it('should update managedPaths to use .pennyfarthing/ paths', () => {
+            runCLI(testDir, ['update']);
+            const manifestPath = join(testDir, '.pennyfarthing/manifest.json');
+            const manifest = JSON.parse(readFileSync(manifestPath, 'utf8'));
+            // Should have new .pennyfarthing/ paths
+            assert.ok(manifest.managedPaths.some((p) => p.startsWith('.pennyfarthing/')), 'managedPaths should include .pennyfarthing/ paths');
+            // Should still include .claude/commands and .claude/skills
+            assert.ok(manifest.managedPaths.includes('.claude/commands'), 'managedPaths should still include .claude/commands');
+            assert.ok(manifest.managedPaths.includes('.claude/skills'), 'managedPaths should still include .claude/skills');
+            // Should NOT include old .claude/agents etc.
+            assert.ok(!manifest.managedPaths.includes('.claude/agents'), 'managedPaths should NOT include legacy .claude/agents');
+        });
+    });
+    // ─── AC4: Validate symlinks for Claude Code compatibility ─────
+    describe('AC4: Test validates symlinks exist for Claude Code compatibility', () => {
+        it('should create .pennyfarthing/ symlinks to node_modules', () => {
+            runCLI(testDir, ['update']);
+            for (const { name, link } of DIRECTORY_SYMLINKS) {
+                const linkPath = join(testDir, link);
+                assert.ok(existsSync(linkPath), `Symlink ${link} should exist after update`);
+                assert.ok(lstatSync(linkPath).isSymbolicLink(), `${link} should be a symlink (not a copy)`);
+            }
+        });
+        it('should maintain .claude/commands as real directory', () => {
+            runCLI(testDir, ['update']);
+            const commandsDir = join(testDir, '.claude/commands');
+            assert.ok(existsSync(commandsDir), '.claude/commands should exist');
+            assert.ok(!lstatSync(commandsDir).isSymbolicLink(), '.claude/commands should be a real directory (for Claude Code discovery)');
+            const files = readdirSync(commandsDir);
+            assert.ok(files.length > 0, '.claude/commands should contain files');
+            assert.ok(files.some(f => f.endsWith('.md')), '.claude/commands should contain .md command files');
+        });
+        it('should maintain .claude/skills as real directory', () => {
+            runCLI(testDir, ['update']);
+            const skillsDir = join(testDir, '.claude/skills');
+            assert.ok(existsSync(skillsDir), '.claude/skills should exist');
+            assert.ok(!lstatSync(skillsDir).isSymbolicLink(), '.claude/skills should be a real directory (for Claude Code discovery)');
+            const entries = readdirSync(skillsDir);
+            assert.ok(entries.length > 0, '.claude/skills should contain skill directories');
+        });
+        it('should create settings.local.json symlink at .claude/', () => {
+            runCLI(testDir, ['update']);
+            const claudeSettings = join(testDir, '.claude/settings.local.json');
+            assert.ok(existsSync(claudeSettings), '.claude/settings.local.json should exist');
+            assert.ok(lstatSync(claudeSettings).isSymbolicLink(), '.claude/settings.local.json should be a symlink (pointing to .pennyfarthing/)');
+            // Verify the symlink target resolves correctly
+            const settings = JSON.parse(readFileSync(claudeSettings, 'utf8'));
+            assert.ok(settings.hooks, 'settings.local.json via symlink should have hooks');
+        });
+        it('should keep .claude/ directory structure intact for Claude Code', () => {
+            runCLI(testDir, ['update']);
+            // These paths must exist for Claude Code to discover commands/skills
+            assert.ok(existsSync(join(testDir, '.claude')), '.claude/ should exist');
+            assert.ok(existsSync(join(testDir, '.claude/commands')), '.claude/commands/ should exist');
+            assert.ok(existsSync(join(testDir, '.claude/skills')), '.claude/skills/ should exist');
+            assert.ok(existsSync(join(testDir, '.claude/settings.local.json')), '.claude/settings.local.json should exist');
+        });
+    });
+    // ─── AC5: Run doctor and confirm it passes ────────────────────
+    describe('AC5: Test runs doctor and confirms it passes', () => {
+        it('should pass doctor check with no failures after update', () => {
+            const updateResult = runCLI(testDir, ['update']);
+            assert.strictEqual(updateResult.status, 0, 'Update should succeed first');
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            assert.strictEqual(doctorResult.status, 0, `Doctor should exit 0.\nStdout: ${doctorResult.stdout}\nStderr: ${doctorResult.stderr}`);
+            const results = extractDoctorJson(doctorResult.stdout);
+            const failures = results.filter((r) => r.status === 'fail');
+            assert.strictEqual(failures.length, 0, `Doctor should have 0 failures after upgrade, got ${failures.length}: ${JSON.stringify(failures, null, 2)}`);
+        });
+        it('doctor should show manifest as passing', () => {
+            runCLI(testDir, ['update']);
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            const results = extractDoctorJson(doctorResult.stdout);
+            const manifestCheck = results.find((r) => r.name === 'manifest/exists');
+            assert.ok(manifestCheck, 'Doctor should check manifest');
+            assert.strictEqual(manifestCheck.status, 'pass', 'Manifest check should pass after upgrade');
+        });
+        it('doctor should show all directory symlinks as passing', () => {
+            runCLI(testDir, ['update']);
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            const results = extractDoctorJson(doctorResult.stdout);
+            const directorySymlinkNames = ['agents', 'guides', 'output-styles', 'personas', 'scripts', 'workflows'];
+            for (const name of directorySymlinkNames) {
+                const check = results.find((r) => r.name === `symlink/${name}`);
+                assert.ok(check, `Doctor should check symlink/${name}`);
+                assert.strictEqual(check.status, 'pass', `symlink/${name} should pass after upgrade, got ${check.status}: ${check.detail}`);
+            }
+        });
+        it('doctor should show settings.local.json as passing', () => {
+            runCLI(testDir, ['update']);
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            const results = extractDoctorJson(doctorResult.stdout);
+            const settingsCheck = results.find((r) => r.name === 'settings.local.json');
+            assert.ok(settingsCheck, 'Doctor should check settings.local.json');
+            assert.strictEqual(settingsCheck.status, 'pass', 'Settings check should pass after upgrade');
+        });
+        it('doctor should show session-start hook as passing', () => {
+            runCLI(testDir, ['update']);
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            const results = extractDoctorJson(doctorResult.stdout);
+            const hookCheck = results.find((r) => r.name === 'settings/session-start-hook');
+            assert.ok(hookCheck, 'Doctor should check session-start hook');
+            assert.strictEqual(hookCheck.status, 'pass', 'Session-start hook should pass after upgrade');
+        });
+        it('doctor should detect no legacy files after migration', () => {
+            runCLI(testDir, ['update']);
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            const results = extractDoctorJson(doctorResult.stdout);
+            // If doctor has a legacy file check, it should pass
+            const legacyChecks = results.filter((r) => r.name.startsWith('legacy/'));
+            for (const check of legacyChecks) {
+                assert.notStrictEqual(check.status, 'fail', `Legacy check ${check.name} should not fail after migration`);
+            }
+        });
+    });
+    // ─── AC6: Cleanup verification ────────────────────────────────
+    describe('AC6: Cleans up the temp repo afterward', () => {
+        it('test cleanup in afterEach removes the temp directory', () => {
+            assert.ok(existsSync(testDir), 'Test dir should exist during test');
+            // afterEach will clean up
+        });
+    });
+    // ─── Idempotency ─────────────────────────────────────────────
+    describe('Idempotency: Running update twice should not break things', () => {
+        it('should succeed when update is run twice', () => {
+            const result1 = runCLI(testDir, ['update']);
+            assert.strictEqual(result1.status, 0, 'First update should succeed');
+            const result2 = runCLI(testDir, ['update']);
+            assert.strictEqual(result2.status, 0, 'Second update should succeed');
+            // Doctor should still pass after double-update
+            const doctorResult = runCLI(testDir, ['doctor', '--json']);
+            assert.strictEqual(doctorResult.status, 0, 'Doctor should pass after double update');
+            const results = extractDoctorJson(doctorResult.stdout);
+            const failures = results.filter((r) => r.status === 'fail');
+            assert.strictEqual(failures.length, 0, 'No doctor failures after double update');
+        });
+    });
+    // ─── Edge cases ───────────────────────────────────────────────
+    describe('Edge cases', () => {
+        it('should handle missing legacy files gracefully', () => {
+            // Remove some legacy files to test partial migration
+            rmSync(join(testDir, '.claude/preferences.yaml'), { force: true });
+            rmSync(join(testDir, '.claude/persona-config.yaml'), { force: true });
+            const result = runCLI(testDir, ['update']);
+            assert.strictEqual(result.status, 0, `Update should succeed even with missing legacy files.\nStdout: ${result.stdout}\nStderr: ${result.stderr}`);
+        });
+        it('should handle already-migrated sidecars (no duplicate)', () => {
+            // Pre-create a sidecar at the new location with different content
+            const newSidecarDir = join(testDir, '.pennyfarthing/sidecars/dev');
+            mkdirSync(newSidecarDir, { recursive: true });
+            writeFileSync(join(newSidecarDir, 'patterns.md'), '# Already at new location\n');
+            const result = runCLI(testDir, ['update']);
+            assert.strictEqual(result.status, 0, 'Update should succeed');
+            // Existing new-location content should NOT be overwritten
+            const content = readFileSync(join(newSidecarDir, 'patterns.md'), 'utf8');
+            assert.ok(content.includes('Already at new location'), 'Pre-existing sidecar content should not be overwritten');
+        });
+        it('should fail without node_modules', () => {
+            // Create a legacy layout without node_modules
+            const bareDir = createTestDir();
+            initGitRepo(bareDir);
+            mkdirSync(join(bareDir, '.claude'), { recursive: true });
+            mkdirSync(join(bareDir, '.pennyfarthing'), { recursive: true });
+            writeFileSync(join(bareDir, '.pennyfarthing/manifest.json'), JSON.stringify({
+                version: '9.0.0',
+                installationType: 'symlink',
+                projectName: 'test',
+                installedAt: new Date().toISOString(),
+                updatedAt: new Date().toISOString(),
+                managedPaths: [],
+                fileHashes: {},
+            }));
+            try {
+                const result = runCLI(bareDir, ['update']);
+                assert.notStrictEqual(result.status, 0, 'Update should fail without node_modules');
+            }
+            finally {
+                rmSync(bareDir, { recursive: true, force: true });
+            }
+        });
+    });
+});
+//# sourceMappingURL=e2e-upgrade.test.js.map

package/dist/cli/commands/e2e-upgrade.test.js.map

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package/dist/cli/commands/init-consolidation.test.d.ts

@@ -0,0 +1,17 @@
+/**
+ * Tests for MSSCI-14370: Update init command for bootstrapping install
+ *
+ * These tests verify that the init command creates the consolidated .pennyfarthing/
+ * layout established by epic-85 stories 1.2-1.5.
+ *
+ * Key changes tested:
+ * - Manifest at .pennyfarthing/manifest.json (not .claude/)
+ * - Template files placed under .pennyfarthing/ (not .claude/)
+ * - managedPaths in manifest reflect new layout
+ * - Backward compatibility with legacy .claude/ manifest
+ * - Directory structure includes .pennyfarthing/project/* dirs
+ *
+ * Run with: cd packages/core && npm run build && npm test
+ */
+export {};
+//# sourceMappingURL=init-consolidation.test.d.ts.map

package/dist/cli/commands/init-consolidation.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"init-consolidation.test.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/init-consolidation.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;GAcG"}