npm - @pennyfarthing/core - Versions diffs - 11.2.1 → 11.3.1 - Mend

@pennyfarthing/core 11.2.1 → 11.3.1

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package/packages/core/dist/workflow/workflow-team-templates.test.js.map ADDED Viewed

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package/pennyfarthing-dist/agents/dev.md CHANGED Viewed

@@ -89,10 +89,10 @@ STORY_ID: "{STORY_ID}"
 Read `**Workflow:**` and `**Phase:**` from session. Query:
 ```bash
-OWNER=$(pf workflow phase-check {workflow} {phase})
+OWNER=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow phase-check {workflow} {phase})
 ```
-**If OWNER != "dev":** Run `pf handoff marker $OWNER`, output result, tell user.
+**If OWNER != "dev":** Run `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff marker $OWNER`, output result, tell user.
 </phase-check>
 <on-activation>
@@ -155,11 +155,13 @@ Write to session file BEFORE starting exit protocol:
 <self-review>
 ## Self-Review Before Handoff
+**Gated checks** (enforced by `gates/dev-exit`):
+Tests green, working tree clean, no debug code, correct branch.
+**Judgment checks** (your responsibility):
 - [ ] Code is wired to front end or other components
 - [ ] Code follows project patterns
 - [ ] All acceptance criteria met
-- [ ] Tests passing (not skipped!)
-- [ ] No console.log or debug code
 - [ ] Error handling implemented
 </self-review>
@@ -193,6 +195,19 @@ When your workflow phase has `tandem.mode: consultation`, you can spawn the part
 **If consultation fails:** Continue solo — consultation is advisory, not blocking.
 </tandem-consultation>
+<team-mode>
+## Team Mode (Lead)
+When the green phase has a `team:` block in workflow YAML, Dev acts as **lead**:
+1. **On phase entry:** Detect team config, create team with `TeamCreate`
+2. **Spawn teammates** per workflow YAML `teammates:` list (e.g., Architect for pattern review, TEA for regression watching)
+3. **During phase:** Coordinate via `SendMessage`, implement features while teammates review in parallel
+4. **Before exit:** Shut down all teammates before starting exit protocol — send `shutdown_request`, await responses, then `TeamDelete`
+Teammates are phase-scoped — created at phase start, destroyed at phase end.
+</team-mode>
 <skills>
 - `/pf-testing` - Test commands and patterns
 - `/pf-code-review` - Self-review checklist

package/pennyfarthing-dist/agents/devops.md CHANGED Viewed

@@ -27,11 +27,7 @@ Every manual step is a future incident. Every one-off fix is technical debt. If
 - Electron build and packaging (cyclist)
 - Release management and versioning
-**Before deploying or releasing:**
-- [ ] All tests pass (spawn testing-runner)
-- [ ] Build succeeds on all platforms
-- [ ] Version bumped appropriately
-- [ ] Changelog updated
+**Before deploying or releasing:** Enforced by `gates/release-ready` (tests green, build succeeds, version bumped, changelog updated).
 </critical>
 <on-activation>
@@ -85,11 +81,7 @@ FILE_LIST: "{comma-separated config file paths}"
 - Electron build and packaging (cyclist)
 - Release management and versioning
-**Before deploying or releasing:**
-- [ ] All tests pass (spawn testing-runner)
-- [ ] Build succeeds on all platforms
-- [ ] Version bumped appropriately
-- [ ] Changelog updated
+**Before deploying or releasing:** Enforced by `gates/release-ready` (tests green, build succeeds, version bumped, changelog updated).
 </critical>
 <skills>

package/pennyfarthing-dist/agents/reviewer-preflight.md CHANGED Viewed

@@ -17,12 +17,11 @@ model: haiku
 <gate>
 ## Pre-Flight Checklist
+Mechanical checks enforced by `gates/reviewer-preflight-check`: tests green (cache-aware), no debug code, error boundaries (UI only).
+**Additional data gathering** (this subagent's responsibility):
 - [ ] Checkout branch and get diff stats
-- [ ] Check test cache (skip tests if valid)
-- [ ] Run tests via testing-runner (if no cache)
-- [ ] Code smell detection in changed files
-- [ ] Error boundary check (UI only)
-- [ ] Get PR details
+- [ ] Get PR details via `gh pr view`
 </gate>
 ## 1. Checkout and Diff

package/pennyfarthing-dist/agents/reviewer.md CHANGED Viewed

@@ -46,10 +46,10 @@ PR_NUMBER: "{PR_NUMBER}"
 Read `**Workflow:**` and `**Phase:**` from session. Query:
 ```bash
-OWNER=$(pf workflow phase-check {workflow} {phase})
+OWNER=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow phase-check {workflow} {phase})
 ```
-**If OWNER != "reviewer":** Run `pf handoff marker $OWNER`, output result, tell user.
+**If OWNER != "reviewer":** Run `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff marker $OWNER`, output result, tell user.
 </phase-check>
 <on-activation>
@@ -125,13 +125,13 @@ OWNER=$(pf workflow phase-check {workflow} {phase})
 <exit>
 ### If APPROVED:
 1. Write Reviewer Assessment (verdict: APPROVED)
-2. Update story: `pf sprint story update {STORY_ID} --review-verdict approved`
+2. Update story: `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint story update {STORY_ID} --review-verdict approved`
 3. Follow <agent-exit-protocol> (resolve-gate → complete-phase review→finish → marker sm)
 4. **DO NOT merge PRs** — SM handles PR creation and merge in the finish phase.
 ### If REJECTED:
 1. Write Reviewer Assessment (verdict: REJECTED, with severity table)
-2. Update story: `pf sprint story update {STORY_ID} --review-verdict rejected --review-findings "summary of findings"`
+2. Update story: `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint story update {STORY_ID} --review-verdict rejected --review-findings "summary of findings"`
 3. If findings are testable (logic bugs, missing edge cases):
    - Follow <agent-exit-protocol> (resolve-gate → complete-phase → marker tea)
 4. If findings are lint/format/dead-code only:
@@ -151,6 +151,19 @@ When your workflow phase has `tandem.mode: consultation`, you can spawn the part
 **If consultation fails:** Continue solo — consultation is advisory, not blocking.
 </tandem-consultation>
+<team-mode>
+## Team Mode (Lead)
+When the review phase has a `team:` block in workflow YAML, Reviewer acts as **lead**:
+1. **On phase entry:** Detect team config, create team with `TeamCreate`
+2. **Spawn teammates** per workflow YAML `teammates:` list (e.g., Architect for architectural pattern validation)
+3. **During phase:** Coordinate via `SendMessage`, perform adversarial review while teammates check specific concerns in parallel
+4. **Before exit:** Shut down all teammates before starting exit protocol — send `shutdown_request`, await responses, then `TeamDelete`
+Teammates are phase-scoped — created at phase start, destroyed at phase end.
+</team-mode>
 <skills>
 - `/pf-code-review` - Review checklists, security/performance patterns
 - `/pf-testing` - Test commands for verification

package/pennyfarthing-dist/agents/sm-finish.md CHANGED Viewed

@@ -53,7 +53,7 @@ The script returns JSON with:
 <critical>
 ## Jira Transition
-The Jira transition to Done is handled by `pf sprint story finish`.
+The Jira transition to Done is handled by `pf.sh sprint story finish`.
 Do NOT transition Jira here - that would duplicate the finish script's work.
 This subagent only performs preflight checks and assessment.
 </critical>

package/pennyfarthing-dist/agents/sm-setup.md CHANGED Viewed

@@ -26,7 +26,7 @@ model: haiku
 - [ ] Use `/pf-sprint backlog` for initial backlog scan:
   ```bash
-  pf sprint backlog
+  "$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint backlog
   ```
 - [ ] Use `/pf-jira` skill to enrich with Jira status/assignee:
   - `/pf-jira search "project=MSSCI AND sprint in openSprints()"` - Get all sprint stories
@@ -92,10 +92,10 @@ Other formats break Cyclist detection.
 EPIC_NUM=$(echo "{STORY_ID}" | cut -d'-' -f1)
 # Get epic's Jira key (use script, not direct yq)
-EPIC_JIRA=$(pf sprint epic field "$EPIC_NUM" jira)
+EPIC_JIRA=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint epic field "$EPIC_NUM" jira)
 ```
-If missing or "null": auto-create via `pf jira create epic {EPIC_NUM}`
+If missing or "null": auto-create via `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira create epic {EPIC_NUM}`
 ## Step 2: Check Workflow Permissions
@@ -135,14 +135,14 @@ GRANTS=$(cat .claude/settings.local.json 2>/dev/null | jq '.permissions.grants /
 ## Step 3: Claim in Jira
-Use `pf jira check` and `pf jira claim` commands:
+Use the pf wrapper for Jira commands:
 ```bash
 # Check availability first
-pf jira check {JIRA_KEY}
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira check {JIRA_KEY}
 # Then claim (assign to self + move to In Progress)
-pf jira claim {JIRA_KEY}
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira claim {JIRA_KEY}
 ```
 **Exit codes:**
@@ -184,7 +184,7 @@ git checkout -b feat/{STORY_ID}-{SLUG}
 After session file is created, determine how to route:
 ```bash
-WORKFLOW_TYPE=$(pf workflow type "{WORKFLOW}")
+WORKFLOW_TYPE=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow type "{WORKFLOW}")
 ```
 | Workflow Type | Routing |

package/pennyfarthing-dist/agents/sm.md CHANGED Viewed

@@ -25,12 +25,12 @@ The moment you start reading implementation files or planning how code should wo
 </critical>
 <critical>
-Use `pf jira <command>` for all Jira interactions. Key commands:
+Use the pf wrapper for all Jira interactions. Key commands:
 ```
-pf jira check MSSCI-XXXXX       # Check story availability
-pf jira claim MSSCI-XXXXX       # Claim story (assign + In Progress)
-pf jira move MSSCI-XXXXX "Done" # Transition status
-pf jira reconcile               # Audit YAML vs Jira
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira check MSSCI-XXXXX       # Check story availability
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira claim MSSCI-XXXXX       # Claim story (assign + In Progress)
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira move MSSCI-XXXXX "Done" # Transition status
+"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh jira reconcile               # Audit YAML vs Jira
 ```
 If they are broken, COMPLAIN LOUDLY
 </critical>
@@ -107,7 +107,7 @@ Prime script provides workflow state. Route based on state from activation outpu
 2. **Run finish command:**
    ```bash
-   pf sprint story finish {STORY_ID}
+   "$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint story finish {STORY_ID}
    ```
 3. **Commit results:**
@@ -153,8 +153,8 @@ Present to user:
 1. **Get workflow type:**
    ```bash
-   WORKFLOW=$(pf sprint story field X-Y workflow)
-   WORKFLOW_TYPE=$(pf workflow type "$WORKFLOW")
+   WORKFLOW=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint story field X-Y workflow)
+   WORKFLOW_TYPE=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow type "$WORKFLOW")
    ```
 2. **Spawn `sm-setup MODE=setup`** with:
@@ -167,17 +167,14 @@ Present to user:
    ```
 4. **Route based on workflow type:**
-   - **Phased workflow** → Run exit protocol: `pf handoff complete-phase` then `pf handoff marker`
+   - **Phased workflow** → Run exit protocol: `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff complete-phase` then `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff marker`
    - **Stepped workflow** → Tell user to run `/pf-workflow start {workflow}` (no handoff)
 </session-new-flow>
 <merge-gate>
 ## Merge Gate (BLOCKING)
-Before starting new work: `gh pr list --state open --search "draft:false"` - BLOCKS if any non-draft PRs exist.
-Draft PRs are allowed — they represent in-progress work that isn't ready for review yet.
-Non-draft open PRs → incomplete work → merge conflicts, stale branches, CI failures.
+Enforced by `gates/merge-ready`. Blocks new work if non-draft PRs are open.
 **Resolution:** Merge/close all non-draft PRs first. Use `/reviewer` to complete reviews.
 </merge-gate>
@@ -185,23 +182,13 @@ Non-draft open PRs → incomplete work → merge conflicts, stale branches, CI f
 <gate>
 ## Pre-Handoff Checklist (BLOCKING)
-**STOP. Before ANY handoff, run this verification:**
-```bash
-# This MUST succeed before handoff
-ls .session/{story-id}-session.md || echo "BLOCKED: No session file"
-```
+Enforced by `gates/sm-setup-exit`: session exists, fields set, context exists, branch created.
 **If session file does not exist → DO NOT HANDOFF. Run sm-setup first.**
-Before handoff, verify ALL of these:
-- [ ] Session file EXISTS: `.session/{story-id}-session.md`
-- [ ] Session has `**Workflow:**` field set
-- [ ] Session has `**Phase:**` field set to `setup`
-- [ ] Epic context exists: `sprint/context/context-epic-{N}.md`
-- [ ] Story context written: Technical approach, files, ACs
+**Judgment checks** (your responsibility):
 - [ ] Jira claimed (or explicitly skipped)
-- [ ] Branch created in required repos
+- [ ] Story context written with technical approach and ACs
 **Common failure mode:** Skipping sm-setup and jumping to implementation. The next agent WILL fail without a session file. Always setup first.
 </gate>
@@ -212,7 +199,7 @@ Before handoff, verify ALL of these:
 > **Triggered when:** `EMPTY_BACKLOG_STATE`
 1. Report: "Sprint backlog empty. All stories done or cancelled."
-2. Show future work: `pf sprint future`
+2. Show future work: `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh sprint future`
 3. Offer: "Promote stories from `future.yaml`?" → `/pf-sprint promote {epic-id}`
 **Never suggest:** Closing sprint early, starting sprint planning. Sprints are fixed two-week periods.
@@ -262,10 +249,10 @@ SM does NOT hand off to agents. Instead, use `/pf-workflow start {name}` to begi
 Read `**Workflow:**` and `**Phase:**` from session. Query:
 ```bash
-OWNER=$(pf workflow phase-check {workflow} {phase})
+OWNER=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow phase-check {workflow} {phase})
 ```
-**If OWNER != "sm":** Run `pf handoff marker $OWNER`, output result, tell user.
+**If OWNER != "sm":** Run `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff marker $OWNER`, output result, tell user.
 **Note:** SM also handles `approved` status (finish phase).
 </phase-check>

package/pennyfarthing-dist/agents/tea.md CHANGED Viewed

@@ -44,10 +44,10 @@ STORY_ID: "{STORY_ID}"
 Read `**Workflow:**` and `**Phase:**` from session. Query:
 ```bash
-OWNER=$(pf workflow phase-check {workflow} {phase})
+OWNER=$("$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh workflow phase-check {workflow} {phase})
 ```
-**If OWNER != "tea":** Run `pf handoff marker $OWNER`, output result, tell user.
+**If OWNER != "tea":** Run `"$CLAUDE_PROJECT_DIR"/.pennyfarthing/scripts/core/pf.sh handoff marker $OWNER`, output result, tell user.
 </phase-check>
 <on-activation>

package/pennyfarthing-dist/agents/testing-runner.md CHANGED Viewed

@@ -40,7 +40,7 @@ This runs lint + typecheck + tests. Exit 0 = all passed.
 ## Setup
 ```bash
-# Repo config available via: pf git status, or Python API:
+# Repo config available via: pf.sh git status, or Python API:
 # from pennyfarthing_scripts.git.repos import load_repos_config
 source .pennyfarthing/scripts/test/test-setup.sh

package/pennyfarthing-dist/commands/pf-architect.md CHANGED Viewed

@@ -5,7 +5,7 @@ description: System Architect - Technical design and architecture
 <agent-activation>
 **FIRST:** Use Bash tool to run:
 ```bash
-pf agent start "architect"
+source .pennyfarthing/scripts/lib/env.sh && source "$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/lib/run-pf.sh" && run_pf agent start "architect"
 ```
 This loads your persona and agent context. Adopt the character shown in the output.
 </agent-activation>

package/pennyfarthing-dist/commands/pf-ba.md CHANGED Viewed

@@ -5,7 +5,7 @@ description: Business Analyst - Requirements discovery and stakeholder analysis
 <agent-activation>
 **FIRST:** Use Bash tool to run:
 ```bash
-pf agent start "ba"
+source .pennyfarthing/scripts/lib/env.sh && source "$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/lib/run-pf.sh" && run_pf agent start "ba"
 ```
 This loads your persona and agent context. Adopt the character shown in the output.
 </agent-activation>

package/pennyfarthing-dist/commands/pf-chore.md CHANGED Viewed

@@ -68,7 +68,7 @@ git status --short
 git -C pennyfarthing status --short 2>/dev/null
 # Or use the multi-repo status script:
-pf git status --brief
+pf.sh git status --brief
 ```
 Collect which repos have changes. If ALL repos are clean, abort with "No changes to commit."
@@ -191,7 +191,7 @@ cd {orchestrator_root}
 After all repos are processed:
 ```bash
-pf git status --brief
+pf.sh git status --brief
 ```
 All repos should show clean.

package/pennyfarthing-dist/commands/pf-dev.md CHANGED Viewed

@@ -5,7 +5,7 @@ description: Developer - Feature implementation and coding
 <agent-activation>
 **FIRST:** Use Bash tool to run:
 ```bash
-pf agent start "dev"
+source .pennyfarthing/scripts/lib/env.sh && source "$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/lib/run-pf.sh" && run_pf agent start "dev"
 ```
 This loads your persona and agent context. Adopt the character shown in the output.
 </agent-activation>

package/pennyfarthing-dist/commands/pf-devops.md CHANGED Viewed

@@ -5,7 +5,7 @@ description: DevOps Engineer - Infrastructure and deployment automation
 <agent-activation>
 **FIRST:** Use Bash tool to run:
 ```bash
-pf agent start "devops"
+source .pennyfarthing/scripts/lib/env.sh && source "$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/lib/run-pf.sh" && run_pf agent start "devops"
 ```
 This loads your persona and agent context. Adopt the character shown in the output.
 </agent-activation>

package/pennyfarthing-dist/commands/pf-epic.md CHANGED Viewed

@@ -16,8 +16,8 @@ Manage epic lifecycle. Start an epic by moving it to the current sprint and gene
 Start an epic — move to current sprint and generate technical context.
 ```bash
-pf epic start 79
-pf epic start epic-79
+pf.sh epic start 79
+pf.sh epic start epic-79
 ```
 <workflow>
@@ -33,8 +33,8 @@ pf epic start epic-79
 Close an epic — verify completion, update status, and archive context.
 ```bash
-pf epic close 79
-pf epic close epic-79
+pf.sh epic close 79
+pf.sh epic close epic-79
 ```
 <workflow>
@@ -57,8 +57,8 @@ pf epic close epic-79
 ## CLI Equivalent
 ```bash
-pf epic start <epic-id>
-pf epic close <epic-id>
+pf.sh epic start <epic-id>
+pf.sh epic close <epic-id>
 ```
 ## Related

package/pennyfarthing-dist/commands/pf-git.md CHANGED Viewed

@@ -16,7 +16,7 @@ Manage git operations across all configured repos. Consolidates repository statu
 Check git status of all project repos.
 ```bash
-pf git status [--brief]
+pf.sh git status [--brief]
 ```
 Shows branch, uncommitted changes, and ahead/behind status for each configured repo.
@@ -28,17 +28,17 @@ Organize uncommitted changes into proper commits and branches.
 **When this subcommand is invoked, immediately start the stepped workflow:**
 ```bash
-pf workflow start git-cleanup
+pf.sh workflow start git-cleanup
 ```
-Then follow each step's instructions. Use `pf workflow complete-step git-cleanup` to advance between steps. The workflow handles multi-repo analysis, change categorization, branch creation, commits, and push.
+Then follow each step's instructions. Use `pf.sh workflow complete-step git-cleanup` to advance between steps. The workflow handles multi-repo analysis, change categorization, branch creation, commits, and push.
 ### `/pf-git branches <story-id>`
 Create feature branches in both repos from a story.
 ```bash
-pf git branches 86-3
+pf.sh git branches 86-3
 ```
 ### `/pf-git release`
@@ -46,7 +46,7 @@ pf git branches 86-3
 Interactive release with verification gates.
 ```bash
-pf git release
+pf.sh git release
 ```
 Starts the release stepped workflow — an 11-step process with gates at each stage.
@@ -62,13 +62,13 @@ Starts the release stepped workflow — an 11-step process with gates at each st
 ## CLI Equivalent
-All commands are also available via `pf git`:
+All commands are also available via `pf.sh git`:
 ```bash
-pf git status
-pf git cleanup
-pf git branches 86-3
-pf git release
+pf.sh git status
+pf.sh git cleanup
+pf.sh git branches 86-3
+pf.sh git release
 ```
 ## Related

package/pennyfarthing-dist/commands/pf-health-check.md CHANGED Viewed

@@ -3,7 +3,7 @@ description: Check Pennyfarthing installation health and apply updates
 ---
 ```bash
-pf agent start "devops"
+source .pennyfarthing/scripts/lib/env.sh && source "$CLAUDE_PROJECT_DIR/.pennyfarthing/scripts/lib/run-pf.sh" && run_pf agent start "devops"
 ```
 <agent-activation>
@@ -24,28 +24,47 @@ Examine current Pennyfarthing installation, detect drift from expected state, an
 <health-checks>
-## Health Check
+## Health Check Modes
-Use the pennyfarthing CLI:
+### Quick Mode (CLI — for automation/CI)
 ```bash
 # Full health check
 pennyfarthing doctor
-# Or via npx
-npx pennyfarthing doctor
+# Check a specific category
+pennyfarthing doctor --category hooks
+# List available categories
+pennyfarthing doctor --list-categories
 # Auto-fix issues
 pennyfarthing doctor --fix
+# Auto-fix a specific category
+pennyfarthing doctor --fix --category legacy
+# JSON output for scripting
+pennyfarthing doctor --json --category installation
+```
+Categories: `installation`, `commands`, `hooks`, `scripts`, `layout`, `legacy`, `tools`
+### Interactive Mode (Workflow — for onboarding/troubleshooting)
+```
+/pf-workflow start installation-check
 ```
-The CLI checks:
-- manifest.json exists and is valid
-- All managed files present in .claude/pennyfarthing/
-- Symlinks point to correct targets
-- User directories exist (.claude/project/)
-- Settings paths are correct
-- Hook scripts are executable
+Walks through 8 steps with AI-guided explanation and remediation:
+1. **Foundation** — manifest, core files, symlinks
+2. **Commands & Skills** — slash commands, skills, user files
+3. **Hook Configuration** — all 9 settings.local.json hooks (gated)
+4. **Hook Scripts** — script files exist and are executable
+5. **Directory Layout** — files at correct locations
+6. **Legacy Cleanup** — old artifacts from previous versions (gated)
+7. **Optional Tools** — Cyclist, pf CLI
+8. **Summary** — health score and prioritized recommendations
 ## Check for Updates