@pella-labs/pinakes 0.3.4 → 0.3.5

package/dist/cli/serve.js

@@ -7,11 +7,14 @@ import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js'
 import { closeDb, openDb } from '../db/client.js';
 import { Repository } from '../db/repository.js';
 import { ChokidarWatcher } from '../ingest/chokidar.js';
+import { RepoMirrorWatcher } from '../ingest/repo-mirror.js';
+import { scanRepoMarkdownFiles } from '../init/scanner.js';
+import { copyMarkdownToWiki } from '../init/copy.js';
 import { IngesterService } from '../ingest/ingester.js';
 import { checkConsistency, listMarkdownFiles } from '../ingest/manifest.js';
 import { executeToolConfig, makeExecuteHandler } from '../mcp/tools/execute.js';
 import { searchToolConfig, makeSearchHandler } from '../mcp/tools/search.js';
-import { resolveAbs, projectWikiPath as defaultProjectWikiPath, projectDbPath as defaultProjectDbPath, projectAuditJsonlPath, personalWikiPath as defaultPersonalWikiPath, personalDbPath as defaultPersonalDbPath, personalAuditJsonlPath, projectDataDir, pinakesRoot, } from '../paths.js';
+import { resolveAbs, projectWikiPath as defaultProjectWikiPath, projectDbPath as defaultProjectDbPath, projectAuditJsonlPath, personalWikiPath as defaultPersonalWikiPath, personalDbPath as defaultPersonalDbPath, personalAuditJsonlPath, projectDataDir, pinakesRoot, legacyProjectWikiPath, ensurePinakesGitignore, } from '../paths.js';
 import { writeAuditRow } from '../observability/audit.js';
 import { child, logger } from '../observability/logger.js';
 import { installSighupHandler, metrics } from '../observability/metrics.js';
@@ -24,10 +27,22 @@ import { QuickJSExecutor } from '../sandbox/executor.js';
  */
 export async function buildServer(options) {
     const projectRoot = resolveAbs(options.projectRoot ?? process.cwd());
-    const projectWiki = resolveAbs(options.wikiPath ?? defaultProjectWikiPath(projectRoot));
+    // Ensure .pinakes/.gitignore exists before any wiki operations
+    ensurePinakesGitignore(projectRoot);
+    // Migrate wiki from old centralized location to in-repo path
+    migrateLegacyWikiToInRepo(projectRoot);
+    const projectWiki = defaultProjectWikiPath(projectRoot);
     if (!existsSync(projectWiki)) {
+        // First run — seed wiki from all repo markdown files
+        const repoFiles = scanRepoMarkdownFiles(projectRoot);
         mkdirSync(projectWiki, { recursive: true });
-        logger.info({ path: projectWiki }, 'created wiki directory');
+        if (repoFiles.length > 0) {
+            const copyResult = copyMarkdownToWiki(repoFiles, projectRoot, projectWiki);
+            logger.info({ copied: copyResult.files_copied, skipped: copyResult.files_skipped, bytes: copyResult.total_bytes }, 'seeded wiki from repo markdown files');
+        }
+        else {
+            logger.info({ path: projectWiki }, 'created empty wiki directory (no .md files found in repo)');
+        }
     }
     const projectDb = resolveAbs(options.dbPath ?? defaultProjectDbPath(projectRoot));
     migrateLegacyInProject(projectRoot, projectDb);
@@ -70,6 +85,12 @@ export async function buildServer(options) {
     if (personalWatcher && personalIngester) {
         await personalWatcher.start(makeOnEvent(personalIngester));
     }
+    // Step 5b: repo mirror watcher — one-way sync from project root → wiki
+    const repoMirror = new RepoMirrorWatcher({
+        projectRoot,
+        wikiRoot: projectWiki,
+    });
+    await repoMirror.start();
     // Step 6: build the MCP server
     const repository = new Repository(projectBundle, personalBundle);
     const executor = new QuickJSExecutor();
@@ -97,7 +118,7 @@ export async function buildServer(options) {
         'Only fall back to Grep/Read/Glob after checking the knowledge base, or when you need ' +
         'to find exact symbols, read specific source files, or make code changes. ' +
         `Use \`${executeToolName}\` for advanced operations: graph traversal, gap detection, writing new knowledge.`;
-    const mcp = new McpServer({ name: serverName, version: '0.3.4' }, { capabilities: { tools: {} }, instructions });
+    const mcp = new McpServer({ name: serverName, version: '0.3.5' }, { capabilities: { tools: {} }, instructions });
     mcp.registerTool(searchToolName, searchToolConfig, instrumentHandler(searchToolName, makeSearchHandler({
         repository, embedder, bundle: projectBundle,
         personalBundle: personalBundle ?? undefined,
@@ -159,6 +180,7 @@ export async function buildServer(options) {
         logger.info({ signal }, 'pinakes shutting down');
         try {
             clearInterval(healthCheckTimer);
+            await repoMirror.stop();
             await projectWatcher.stop();
             if (personalWatcher)
                 await personalWatcher.stop();
@@ -242,14 +264,39 @@ async function runStartupConsistency(ingester, wikiDir, scope, writer) {
         }
     }
 }
+/**
+ * Migrate wiki from the old centralized `~/.pinakes/projects/<mangled>/wiki/`
+ * to the new in-repo `<projectRoot>/.pinakes/wiki/` path.
+ *
+ * Uses cpSync (not renameSync) because old and new paths may be on different
+ * filesystems. Safe: if copy fails, old data remains untouched.
+ */
+function migrateLegacyWikiToInRepo(projectRoot) {
+    const oldWiki = legacyProjectWikiPath(projectRoot);
+    const newWiki = defaultProjectWikiPath(projectRoot);
+    if (existsSync(oldWiki) && !existsSync(newWiki)) {
+        try {
+            mkdirSync(dirname(newWiki), { recursive: true });
+            cpSync(oldWiki, newWiki, { recursive: true });
+            rmSync(oldWiki, { recursive: true, force: true });
+            logger.info({ from: oldWiki, to: newWiki }, 'migrated wiki from centralized to in-repo path');
+        }
+        catch (err) {
+            logger.warn({ err, from: oldWiki, to: newWiki }, 'wiki migration failed — continuing');
+        }
+    }
+    else if (existsSync(oldWiki) && existsSync(newWiki)) {
+        logger.warn({ old: oldWiki, new: newWiki }, 'wiki exists at both legacy and in-repo paths — using in-repo path. Remove legacy path manually if no longer needed.');
+    }
+}
 /**
  * Migrate legacy data from in-project `.pinakes/` (or `kg.db`) to the new
  * centralized `~/.pinakes/projects/<mangled>/` layout.
  *
  * Handles three legacy layouts:
  *   1. `<projectRoot>/kg.db` — Phase 1 flat layout
- *   2. `<projectRoot>/.pinakes/` — Phase 2 in-project layout
- *   3. `~/.pharos/profile/` — legacy personal wiki location
+ *   2. `<projectRoot>/.pinakes/` — Phase 2 in-project layout (DB/manifest/audit only; wiki stays in-repo)
+ *   3. Orphaned manifest files in project root
  */
 function migrateLegacyInProject(projectRoot, newDbPath) {
     const targetDir = projectDataDir(projectRoot);
@@ -265,25 +312,26 @@ function migrateLegacyInProject(projectRoot, newDbPath) {
         }
         logger.info({ from: legacyDb, to: newDbPath }, 'migrated legacy kg.db');
     }
-    // 2. Legacy in-project .pinakes/ directory
+    // 2. Legacy in-project .pinakes/ — only migrate non-wiki items (DB, manifest,
+    //    audit) to centralized location. Wiki stays in-repo.
     const legacyPinakesDir = resolve(projectRoot, '.pinakes');
     if (existsSync(legacyPinakesDir) && legacyPinakesDir !== targetDir) {
         mkdirSync(targetDir, { recursive: true });
-        // Copy contents (DB, audit.jsonl, manifest.json, wiki/) to new location
-        // Only migrate files that don't already exist at the target
         try {
             const entries = readdirSync(legacyPinakesDir, { withFileTypes: true });
             for (const entry of entries) {
+                // Skip wiki/ and .gitignore — they belong in-repo
+                if (entry.name === 'wiki' || entry.name === '.gitignore')
+                    continue;
                 const src = resolve(legacyPinakesDir, entry.name);
                 const dst = resolve(targetDir, entry.name);
                 if (!existsSync(dst)) {
                     cpSync(src, dst, { recursive: true });
                     logger.info({ from: src, to: dst }, 'migrated legacy .pinakes entry');
                 }
+                // Remove the migrated source entry (but keep .pinakes/ dir since wiki lives there now)
+                rmSync(src, { recursive: true, force: true });
             }
-            // Remove old .pinakes/ after successful migration
-            rmSync(legacyPinakesDir, { recursive: true, force: true });
-            logger.info({ path: legacyPinakesDir }, 'removed legacy .pinakes/ directory');
         }
         catch (err) {
             logger.warn({ err, from: legacyPinakesDir, to: targetDir }, 'legacy .pinakes/ migration failed — continuing');

package/dist/cli/serve.js.map

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package/dist/cli/status.d.ts

@@ -12,8 +12,6 @@ export interface StatusOptions {
     projectRoot?: string;
     /** Path to project DB override */
     dbPath?: string;
-    /** Path to project wiki dir (unused in new layout, kept for backwards compat) */
-    wikiPath?: string;
     /** Path to personal DB (default: `~/.pinakes/pinakes.db`) */
     profileDbPath?: string;
 }

package/dist/cli/status.d.ts.map

@@ -1 +1 @@
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package/dist/cli/status.js.map

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package/dist/ingest/repo-mirror.d.ts

@@ -0,0 +1,16 @@
+export interface RepoMirrorOptions {
+    projectRoot: string;
+    wikiRoot: string;
+}
+export declare class RepoMirrorWatcher {
+    private watcher;
+    private pending;
+    private readonly projectRoot;
+    private readonly wikiRoot;
+    constructor(opts: RepoMirrorOptions);
+    start(): Promise<void>;
+    stop(): Promise<void>;
+    private queueMirror;
+    private executeMirror;
+}
+//# sourceMappingURL=repo-mirror.d.ts.map

package/dist/ingest/repo-mirror.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"repo-mirror.d.ts","sourceRoot":"","sources":["../../src/ingest/repo-mirror.ts"],"names":[],"mappings":"AAqBA,MAAM,WAAW,iBAAiB;IAChC,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,CAAC;CAClB;AAQD,qBAAa,iBAAiB;IAC5B,OAAO,CAAC,OAAO,CAA0B;IACzC,OAAO,CAAC,OAAO,CAAyC;IACxD,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAS;IACrC,OAAO,CAAC,QAAQ,CAAC,QAAQ,CAAS;gBAEtB,IAAI,EAAE,iBAAiB;IAK7B,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;IA4CtB,IAAI,IAAI,OAAO,CAAC,IAAI,CAAC;IAY3B,OAAO,CAAC,WAAW;IAoBnB,OAAO,CAAC,aAAa;CAmBtB"}

package/dist/ingest/repo-mirror.js

@@ -0,0 +1,116 @@
+import { cpSync, existsSync, mkdirSync, rmSync } from 'node:fs';
+import { dirname, relative, resolve } from 'node:path';
+import chokidar from 'chokidar';
+import { logger } from '../observability/logger.js';
+/**
+ * `RepoMirrorWatcher` — one-way sync from project repo → wiki directory.
+ *
+ * Watches `<projectRoot>` for `.md` file changes outside `.pinakes/wiki/`,
+ * and mirrors them into the wiki. The existing wiki `ChokidarWatcher` then
+ * picks up the copied file and indexes it.
+ *
+ * Direction: repo → wiki only. Wiki-only files (no repo counterpart) are
+ * never touched. Edits to mirrored files in the wiki will be overwritten
+ * on the next repo-side change.
+ */
+const DEBOUNCE_MS = 2_000;
+export class RepoMirrorWatcher {
+    watcher = null;
+    pending = new Map();
+    projectRoot;
+    wikiRoot;
+    constructor(opts) {
+        this.projectRoot = resolve(opts.projectRoot);
+        this.wikiRoot = resolve(opts.wikiRoot);
+    }
+    async start() {
+        if (this.watcher)
+            throw new Error('RepoMirrorWatcher.start called twice');
+        this.watcher = chokidar.watch(this.projectRoot, {
+            ignoreInitial: true, // Don't mirror on startup — auto-seed already handled that
+            awaitWriteFinish: false,
+            ignored: [
+                '**/node_modules/**',
+                '**/.git/**',
+                '**/.pinakes/**',
+                '**/dist/**',
+                '**/build/**',
+                '**/coverage/**',
+                '**/.next/**',
+                '**/.nuxt/**',
+                '**/vendor/**',
+                '**/__pycache__/**',
+                '**/.tox/**',
+                '**/target/**',
+            ],
+        });
+        const isMarkdown = (path) => path.toLowerCase().endsWith('.md');
+        this.watcher.on('add', (path) => {
+            if (isMarkdown(path))
+                this.queueMirror('copy', path);
+        });
+        this.watcher.on('change', (path) => {
+            if (isMarkdown(path))
+                this.queueMirror('copy', path);
+        });
+        this.watcher.on('unlink', (path) => {
+            if (isMarkdown(path))
+                this.queueMirror('remove', path);
+        });
+        this.watcher.on('error', (err) => {
+            logger.error({ err }, 'repo mirror watcher error');
+        });
+        await new Promise((resolveWait) => {
+            this.watcher.once('ready', () => resolveWait());
+        });
+        logger.info({ projectRoot: this.projectRoot }, 'repo mirror watcher started');
+    }
+    async stop() {
+        for (const pending of this.pending.values()) {
+            clearTimeout(pending.timer);
+        }
+        this.pending.clear();
+        if (this.watcher) {
+            await this.watcher.close();
+            this.watcher = null;
+        }
+    }
+    queueMirror(kind, sourcePath) {
+        const abs = resolve(sourcePath);
+        const existing = this.pending.get(abs);
+        if (existing) {
+            existing.kind = kind;
+            existing.sourcePath = abs;
+            return;
+        }
+        const timer = setTimeout(() => {
+            const pending = this.pending.get(abs);
+            this.pending.delete(abs);
+            if (pending) {
+                this.executeMirror(pending);
+            }
+        }, DEBOUNCE_MS);
+        this.pending.set(abs, { kind, sourcePath: abs, timer });
+    }
+    executeMirror(pending) {
+        const rel = relative(this.projectRoot, pending.sourcePath);
+        if (rel.startsWith('..'))
+            return; // safety
+        const target = resolve(this.wikiRoot, rel);
+        try {
+            if (pending.kind === 'copy') {
+                mkdirSync(dirname(target), { recursive: true });
+                cpSync(pending.sourcePath, target);
+                logger.debug({ source: pending.sourcePath, target }, 'repo mirror: copied');
+            }
+            else if (pending.kind === 'remove' && existsSync(target)) {
+                rmSync(target);
+                logger.debug({ target }, 'repo mirror: removed');
+            }
+        }
+        catch (err) {
+            logger.warn({ err, source: pending.sourcePath, target }, 'repo mirror: operation failed');
+        }
+    }
+}
+//# sourceMappingURL=repo-mirror.js.map

package/dist/ingest/repo-mirror.js.map

@@ -0,0 +1 @@
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package/dist/init/copy.d.ts

@@ -0,0 +1,18 @@
+export interface CopyResult {
+    files_copied: number;
+    files_skipped: number;
+    total_bytes: number;
+}
+/**
+ * Copy markdown files from the project repo into the wiki directory,
+ * preserving relative directory structure.
+ *
+ * Idempotent: skips files that already exist in the target. This allows
+ * re-running `pinakes init` without overwriting curated wiki edits.
+ *
+ * @param files Absolute paths to source markdown files
+ * @param projectRoot Absolute path to the project root
+ * @param wikiRoot Absolute path to the wiki directory (`<project>/.pinakes/wiki/`)
+ */
+export declare function copyMarkdownToWiki(files: string[], projectRoot: string, wikiRoot: string): CopyResult;
+//# sourceMappingURL=copy.d.ts.map

package/dist/init/copy.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"copy.d.ts","sourceRoot":"","sources":["../../src/init/copy.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,UAAU;IACzB,YAAY,EAAE,MAAM,CAAC;IACrB,aAAa,EAAE,MAAM,CAAC;IACtB,WAAW,EAAE,MAAM,CAAC;CACrB;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,kBAAkB,CAChC,KAAK,EAAE,MAAM,EAAE,EACf,WAAW,EAAE,MAAM,EACnB,QAAQ,EAAE,MAAM,GACf,UAAU,CA4BZ"}

package/dist/init/copy.js

@@ -0,0 +1,40 @@
+import { cpSync, existsSync, mkdirSync, statSync } from 'node:fs';
+import { dirname, relative, resolve } from 'node:path';
+import { logger } from '../observability/logger.js';
+/**
+ * Copy markdown files from the project repo into the wiki directory,
+ * preserving relative directory structure.
+ *
+ * Idempotent: skips files that already exist in the target. This allows
+ * re-running `pinakes init` without overwriting curated wiki edits.
+ *
+ * @param files Absolute paths to source markdown files
+ * @param projectRoot Absolute path to the project root
+ * @param wikiRoot Absolute path to the wiki directory (`<project>/.pinakes/wiki/`)
+ */
+export function copyMarkdownToWiki(files, projectRoot, wikiRoot) {
+    const result = { files_copied: 0, files_skipped: 0, total_bytes: 0 };
+    for (const absPath of files) {
+        const rel = relative(projectRoot, absPath);
+        // Safety: skip files that resolve outside the project root
+        if (rel.startsWith('..'))
+            continue;
+        const target = resolve(wikiRoot, rel);
+        if (existsSync(target)) {
+            result.files_skipped++;
+            continue;
+        }
+        try {
+            mkdirSync(dirname(target), { recursive: true });
+            cpSync(absPath, target);
+            const size = statSync(target).size;
+            result.total_bytes += size;
+            result.files_copied++;
+        }
+        catch (err) {
+            logger.warn({ err, source: absPath, target }, 'failed to copy file to wiki');
+        }
+    }
+    return result;
+}
+//# sourceMappingURL=copy.js.map

package/dist/init/copy.js.map

@@ -0,0 +1 @@
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package/dist/init/scanner.d.ts

@@ -0,0 +1,10 @@
+/**
+ * Scan a project directory for markdown files, respecting .gitignore.
+ *
+ * Primary strategy: `git ls-files` (fast, respects .gitignore).
+ * Fallback: recursive walk with hardcoded excludes (non-git repos).
+ *
+ * Returns absolute paths, sorted deterministically.
+ */
+export declare function scanRepoMarkdownFiles(projectRoot: string): string[];
+//# sourceMappingURL=scanner.d.ts.map

package/dist/init/scanner.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"scanner.d.ts","sourceRoot":"","sources":["../../src/init/scanner.ts"],"names":[],"mappings":"AAMA;;;;;;;GAOG;AACH,wBAAgB,qBAAqB,CAAC,WAAW,EAAE,MAAM,GAAG,MAAM,EAAE,CAOnE"}

package/dist/init/scanner.js

@@ -0,0 +1,77 @@
+import { execFileSync } from 'node:child_process';
+import { readdirSync } from 'node:fs';
+import { resolve } from 'node:path';
+import { logger } from '../observability/logger.js';
+/**
+ * Scan a project directory for markdown files, respecting .gitignore.
+ *
+ * Primary strategy: `git ls-files` (fast, respects .gitignore).
+ * Fallback: recursive walk with hardcoded excludes (non-git repos).
+ *
+ * Returns absolute paths, sorted deterministically.
+ */
+export function scanRepoMarkdownFiles(projectRoot) {
+    try {
+        return scanViaGit(projectRoot);
+    }
+    catch {
+        logger.debug({ projectRoot }, 'git ls-files failed, falling back to recursive walk');
+        return scanViaWalk(projectRoot);
+    }
+}
+// ---------------------------------------------------------------------------
+// Git-based scan
+// ---------------------------------------------------------------------------
+function scanViaGit(projectRoot) {
+    const stdout = execFileSync('git', ['ls-files', '--cached', '--others', '--exclude-standard', '--', '*.md'], { cwd: projectRoot, encoding: 'utf-8', timeout: 10_000, maxBuffer: 4 * 1024 * 1024 });
+    return stdout
+        .split('\n')
+        .map((l) => l.trim())
+        .filter((l) => l.length > 0)
+        .filter((l) => !l.startsWith('.pinakes/'))
+        .map((rel) => resolve(projectRoot, rel))
+        .sort();
+}
+// ---------------------------------------------------------------------------
+// Fallback recursive walk
+// ---------------------------------------------------------------------------
+const WALK_EXCLUDES = new Set([
+    '.git',
+    '.pinakes',
+    'node_modules',
+    'dist',
+    'build',
+    'coverage',
+    '.next',
+    '.nuxt',
+    'vendor',
+    '__pycache__',
+    '.tox',
+    'target',
+]);
+function scanViaWalk(projectRoot) {
+    const results = [];
+    walkDir(projectRoot, projectRoot, results);
+    return results.sort();
+}
+function walkDir(dir, projectRoot, results) {
+    let entries;
+    try {
+        entries = readdirSync(dir, { withFileTypes: true });
+    }
+    catch {
+        return; // permission denied, symlink loop, etc.
+    }
+    for (const entry of entries) {
+        if (WALK_EXCLUDES.has(entry.name))
+            continue;
+        const full = resolve(dir, entry.name);
+        if (entry.isDirectory()) {
+            walkDir(full, projectRoot, results);
+        }
+        else if (entry.isFile() && entry.name.endsWith('.md')) {
+            results.push(full);
+        }
+    }
+}
+//# sourceMappingURL=scanner.js.map

package/dist/init/scanner.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"scanner.js","sourceRoot":"","sources":["../../src/init/scanner.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AACtC,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAEpC,OAAO,EAAE,MAAM,EAAE,MAAM,4BAA4B,CAAC;AAEpD;;;;;;;GAOG;AACH,MAAM,UAAU,qBAAqB,CAAC,WAAmB;IACvD,IAAI,CAAC;QACH,OAAO,UAAU,CAAC,WAAW,CAAC,CAAC;IACjC,CAAC;IAAC,MAAM,CAAC;QACP,MAAM,CAAC,KAAK,CAAC,EAAE,WAAW,EAAE,EAAE,qDAAqD,CAAC,CAAC;QACrF,OAAO,WAAW,CAAC,WAAW,CAAC,CAAC;IAClC,CAAC;AACH,CAAC;AAED,8EAA8E;AAC9E,iBAAiB;AACjB,8EAA8E;AAE9E,SAAS,UAAU,CAAC,WAAmB;IACrC,MAAM,MAAM,GAAG,YAAY,CACzB,KAAK,EACL,CAAC,UAAU,EAAE,UAAU,EAAE,UAAU,EAAE,oBAAoB,EAAE,IAAI,EAAE,MAAM,CAAC,EACxE,EAAE,GAAG,EAAE,WAAW,EAAE,QAAQ,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,EAAE,SAAS,EAAE,CAAC,GAAG,IAAI,GAAG,IAAI,EAAE,CACrF,CAAC;IAEF,OAAO,MAAM;SACV,KAAK,CAAC,IAAI,CAAC;SACX,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC;SACpB,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,GAAG,CAAC,CAAC;SAC3B,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,WAAW,CAAC,CAAC;SACzC,GAAG,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,GAAG,CAAC,CAAC;SACvC,IAAI,EAAE,CAAC;AACZ,CAAC;AAED,8EAA8E;AAC9E,0BAA0B;AAC1B,8EAA8E;AAE9E,MAAM,aAAa,GAAG,IAAI,GAAG,CAAC;IAC5B,MAAM;IACN,UAAU;IACV,cAAc;IACd,MAAM;IACN,OAAO;IACP,UAAU;IACV,OAAO;IACP,OAAO;IACP,QAAQ;IACR,aAAa;IACb,MAAM;IACN,QAAQ;CACT,CAAC,CAAC;AAEH,SAAS,WAAW,CAAC,WAAmB;IACtC,MAAM,OAAO,GAAa,EAAE,CAAC;IAC7B,OAAO,CAAC,WAAW,EAAE,WAAW,EAAE,OAAO,CAAC,CAAC;IAC3C,OAAO,OAAO,CAAC,IAAI,EAAE,CAAC;AACxB,CAAC;AAED,SAAS,OAAO,CAAC,GAAW,EAAE,WAAmB,EAAE,OAAiB;IAClE,IAAI,OAAO,CAAC;IACZ,IAAI,CAAC;QACH,OAAO,GAAG,WAAW,CAAC,GAAG,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;IACtD,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,CAAC,wCAAwC;IAClD,CAAC;IAED,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;QAC5B,IAAI,aAAa,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC;YAAE,SAAS;QAE5C,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC;QAEtC,IAAI,KAAK,CAAC,WAAW,EAAE,EAAE,CAAC;YACxB,OAAO,CAAC,IAAI,EAAE,WAAW,EAAE,OAAO,CAAC,CAAC;QACtC,CAAC;aAAM,IAAI,KAAK,CAAC,MAAM,EAAE,IAAI,KAAK,CAAC,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC;YACxD,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACrB,CAAC;IACH,CAAC;AACH,CAAC"}

package/dist/paths.d.ts

@@ -1,12 +1,16 @@
 /**
  * Centralized path resolution for Pinakes.
  *
- * All Pinakes data lives under a single root directory (~/.pinakes by default).
- * Project data is stored in mirrored paths under ~/.pinakes/projects/, using
- * the Claude Code convention of replacing '/' with '-' in the absolute project
- * path. Personal data lives directly under the root.
+ * Project wiki lives in-repo at `<projectRoot>/.pinakes/wiki/` (committed to
+ * git, team-shared). Index files (DB, manifest, audit) live under the
+ * centralized `~/.pinakes/projects/<mangled>/` directory (not committed).
+ * Personal data lives directly under `~/.pinakes/`.
  *
  * Layout:
+ *   <projectRoot>/.pinakes/
+ *     wiki/                                       # project wiki (committed)
+ *     .gitignore                                  # auto-generated (committed)
+ *
  *   ~/.pinakes/
  *     wiki/                                       # personal wiki
  *     pinakes.db                                  # personal DB
@@ -14,7 +18,6 @@
  *     manifest.json                               # personal manifest
  *     projects/
  *       -Users-sebastian-dev-myproject/            # mangled project root
- *         wiki/                                   # project wiki
  *         pinakes.db                              # project DB
  *         audit.jsonl                             # project audit
  *         manifest.json                           # project manifest
@@ -40,6 +43,11 @@ export declare function pinakesRoot(): string;
  */
 export declare function projectDataDir(projectRoot: string): string;
 export declare function projectWikiPath(projectRoot: string): string;
+/**
+ * Legacy wiki path (pre-v0.3): `~/.pinakes/projects/<mangled>/wiki/`.
+ * Used only by the migration function in serve.ts.
+ */
+export declare function legacyProjectWikiPath(projectRoot: string): string;
 export declare function projectDbPath(projectRoot: string): string;
 export declare function projectAuditJsonlPath(projectRoot: string): string;
 export declare function projectManifestPath(projectRoot: string): string;
@@ -50,9 +58,14 @@ export declare function personalManifestPath(): string;
 export interface CliPathOverrides {
     projectRoot?: string;
     dbPath?: string;
-    wikiPath?: string;
     profileDbPath?: string;
 }
+/**
+ * Ensure `<projectRoot>/.pinakes/.gitignore` exists so the DB, manifest, and
+ * audit files are never accidentally committed. Idempotent — skips if file
+ * already exists.
+ */
+export declare function ensurePinakesGitignore(projectRoot: string): void;
 /**
  * Resolve the DB path for a given scope, honoring CLI overrides.
  * Shared by all CLI subcommands (status, audit, export, import, purge, etc.)

package/dist/paths.d.ts.map

@@ -1 +1 @@
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