@peerbit/log 6.0.7 → 6.0.8

package/dist/src/trim.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@peerbit/log",
-  "version": "6.0.7",
+  "version": "6.0.8",
   "description": "Append-only log CRDT",
   "author": "dao.xyz",
   "license": "MIT",
@@ -69,19 +69,19 @@
     "pino": "^9.4.0",
     "uuid": "^10.0.0",
     "uint8arrays": "^5.1.0",
-    "@peerbit/blocks-interface": "2.0.1",
     "@peerbit/blocks": "4.0.3",
     "@peerbit/cache": "3.0.0",
     "@peerbit/crypto": "3.0.0",
     "@peerbit/any-store": "2.2.5",
-    "@peerbit/indexer-sqlite3": "3.0.0",
-    "@peerbit/indexer-interface": "3.0.0",
+    "@peerbit/blocks-interface": "2.0.1",
+    "@peerbit/indexer-sqlite3": "3.0.1",
     "@peerbit/indexer-simple": "1.2.3",
     "@peerbit/pubsub-interface": "5.0.2",
-    "@peerbit/stream-interface": "6.0.1",
+    "@peerbit/indexer-interface": "3.0.0",
     "@peerbit/keychain": "1.2.5",
     "@peerbit/logger": "2.0.0",
-    "@peerbit/time": "3.0.0"
+    "@peerbit/time": "3.0.0",
+    "@peerbit/stream-interface": "6.0.1"
   },
   "devDependencies": {
     "@types/libsodium-wrappers": "^0.7.14",
@@ -90,7 +90,7 @@
     "assert": "^2.0.0",
     "json-stringify-deterministic": "^1.0.7",
     "tty-table": "^4.2.1",
-    "@peerbit/test-utils": "3.0.7"
+    "@peerbit/test-utils": "3.0.8"
   },
   "contributors": [
     "haadcode",
@@ -114,6 +114,7 @@
     "clean": "aegir clean",
     "build": "aegir build --no-bundle",
     "test": "aegir test --target node",
-    "lint": "aegir lint"
+    "lint": "aegir lint",
+    "test:cov": "aegir test -t node --cov"
   }
 }

package/src/entry-index.ts

@@ -32,6 +32,7 @@ export type ResultsIterator<T> = {
 };
 
 const ENTRY_CACHE_MAX_SIZE = 10; // TODO as param for log
+const DEFERRED_INDEX_FLUSH_IDLE_MS = 250;
 type ResolveFullyOptions =
 	| true
 	| {
@@ -66,6 +67,8 @@ export class EntryIndex<T> {
 	private initialied = false;
 	private _length: number;
 	private insertionPromises: Map<string, Promise<void>>;
+	private pendingIndexWrites: Map<string, ShallowEntry>;
+	private pendingIndexFlushTimer?: ReturnType<typeof setTimeout>;
 	constructor(
 		readonly properties: {
 			store: Blocks;
@@ -94,6 +97,48 @@ export class EntryIndex<T> {
 		this.cache = properties.cache ?? new Cache({ max: ENTRY_CACHE_MAX_SIZE });
 		this._length = 0;
 		this.insertionPromises = new Map();
+		this.pendingIndexWrites = new Map();
+	}
+
+	private schedulePendingIndexWriteFlush() {
+		if (this.pendingIndexFlushTimer) {
+			clearTimeout(this.pendingIndexFlushTimer);
+		}
+		this.pendingIndexFlushTimer = setTimeout(() => {
+			void this.flushPendingWrites().catch((error) => {
+				log.error("Failed to flush deferred entry-index writes", error);
+			});
+		}, DEFERRED_INDEX_FLUSH_IDLE_MS);
+		this.pendingIndexFlushTimer.unref?.();
+	}
+
+	private clearPendingIndexFlushTimer() {
+		if (!this.pendingIndexFlushTimer) {
+			return;
+		}
+		clearTimeout(this.pendingIndexFlushTimer);
+		this.pendingIndexFlushTimer = undefined;
+	}
+
+	async flushPendingWrites(hashes?: Iterable<string>) {
+		const keys = hashes
+			? [...new Set([...hashes].filter((hash): hash is string => !!hash))]
+			: [...this.pendingIndexWrites.keys()];
+		if (keys.length === 0) {
+			return;
+		}
+		this.clearPendingIndexFlushTimer();
+		for (const hash of keys) {
+			const pending = this.pendingIndexWrites.get(hash);
+			if (!pending) {
+				continue;
+			}
+			await this.properties.index.put(pending);
+			this.pendingIndexWrites.delete(hash);
+		}
+		if (this.pendingIndexWrites.size > 0) {
+			this.schedulePendingIndexWriteFlush();
+		}
 	}
 
 	getHeads<R extends MaybeResolveOptions = false>(
@@ -131,6 +176,14 @@ export class EntryIndex<T> {
 	}
 
 	countHasNext(next: string, excludeHash: string | undefined = undefined) {
+		return this._countHasNext(next, excludeHash);
+	}
+
+	private async _countHasNext(
+		next: string,
+		excludeHash: string | undefined = undefined,
+	) {
+		await this.flushPendingWrites();
 		const query: Query[] = [
 			new StringMatch({
 				key: ["meta", "next"],
@@ -172,20 +225,32 @@ export class EntryIndex<T> {
 			? ({ hash: true } as const)
 			: ((options as { shape: Shape })?.shape as Shape);
 
-		const iterator = this.properties.index.iterate(
-			{ query, sort },
-			{ shape: nextShape },
-		);
+		let iteratorRef: ReturnType<typeof this.properties.index.iterate> | undefined;
+		let iteratorPromise:
+			| Promise<ReturnType<typeof this.properties.index.iterate>>
+			| undefined;
+
+		const getIterator = async () => {
+			await this.flushPendingWrites();
+			if (!iteratorPromise) {
+				iteratorRef = this.properties.index.iterate(
+					{ query, sort },
+					{ shape: nextShape },
+				);
+				iteratorPromise = Promise.resolve(iteratorRef);
+			}
+			return iteratorPromise;
+		};
 
 		const next = async (
 			amount: number,
 		): Promise<ReturnTypeFromResolveOptions<R, T>[]> => {
-			const results = await iterator.next(amount);
+			const results = await (await getIterator()).next(amount);
 			return coerce(results);
 		};
 
 		const all = async (): Promise<ReturnTypeFromResolveOptions<R, T>[]> => {
-			const results = await iterator.all();
+			const results = await (await getIterator()).all();
 			return coerce(results);
 		};
 
@@ -211,8 +276,8 @@ export class EntryIndex<T> {
 		};
 
 		return {
-			close: iterator.close,
-			done: iterator.done,
+			close: async () => iteratorRef?.close(),
+			done: () => iteratorRef?.done(),
 			next,
 			all,
 		};
@@ -271,6 +336,10 @@ export class EntryIndex<T> {
 	}
 
 	async getShallow(k: string) {
+		const pending = this.pendingIndexWrites.get(k);
+		if (pending) {
+			return { id: toId(k), value: pending };
+		}
 		return this.properties.index.get(toId(k));
 	}
 
@@ -279,15 +348,76 @@ export class EntryIndex<T> {
 		if (mem) {
 			return true;
 		}
+		if (this.pendingIndexWrites.has(k)) {
+			return true;
+		}
 		const result = await this.properties.index.get(toId(k), {
 			shape: { hash: true },
 		});
 		return result != null;
 	}
 
+	async hasMany(hashes: Iterable<string>) {
+		const batchSize = 64;
+		const existing = new Set<string>();
+		const missing: string[] = [];
+		for (const hash of new Set([...hashes].filter(Boolean))) {
+			if (this.cache.get(hash) || this.pendingIndexWrites.has(hash)) {
+				existing.add(hash);
+				continue;
+			}
+			missing.push(hash);
+		}
+
+		if (missing.length === 0) {
+			return existing;
+		}
+
+		for (let i = 0; i < missing.length; i += batchSize) {
+			const batch = missing.slice(i, i + batchSize);
+			const iterator = this.properties.index.iterate(
+				{
+					query:
+						batch.length === 1
+							? new StringMatch({
+									key: "hash",
+									value: batch[0]!,
+								})
+							: new Or(
+									batch.map(
+										(hash) =>
+											new StringMatch({
+												key: "hash",
+												value: hash,
+											}),
+									),
+								),
+				},
+				{
+					shape: { hash: true },
+				},
+			);
+			try {
+				const indexed = await iterator.all();
+				for (const entry of indexed) {
+					existing.add(entry.value.hash);
+				}
+			} finally {
+				await iterator.close();
+			}
+		}
+
+		return existing;
+	}
+
 	async put(
 		entry: Entry<any>,
-		properties: { unique: boolean; isHead: boolean; toMultiHash: boolean },
+		properties: {
+			unique: boolean;
+			isHead: boolean;
+			toMultiHash: boolean;
+			deferIndexWrite?: boolean;
+		},
 	) {
 		if (properties.toMultiHash) {
 			const existingHash = entry.hash;
@@ -322,8 +452,20 @@ export class EntryIndex<T> {
 
 				// add cache after .has check before .has uses the cache
 				this.cache.add(entry.hash, entry);
-
-				await this.properties.index.put(entry.toShallow(properties.isHead));
+				const shallowEntry = entry.toShallow(properties.isHead);
+				const shouldDeferIndexWrite =
+					properties.deferIndexWrite === true &&
+					properties.isHead &&
+					entry.meta.type !== EntryType.CUT &&
+					entry.meta.next.length === 0;
+
+				if (shouldDeferIndexWrite) {
+					this.pendingIndexWrites.set(entry.hash, shallowEntry);
+					this.schedulePendingIndexWriteFlush();
+				} else {
+					await this.flushPendingWrites(entry.meta.next);
+					await this.properties.index.put(shallowEntry);
+				}
 
 				// check if gids has been shadowed, by query all nexts that have a different gid
 				if (this.properties.onGidRemoved && entry.meta.next.length > 0) {
@@ -388,10 +530,18 @@ export class EntryIndex<T> {
 			throw new Error("Shallow hash doesn't match the key");
 		}
 
-		from = from || (await this.getShallow(k))?.value;
+		const pending = this.pendingIndexWrites.get(k);
+		from = from || pending || (await this.getShallow(k))?.value;
 		if (!from) {
 			return; // already deleted
 		}
+		if (pending) {
+			this.pendingIndexWrites.delete(k);
+			await this.properties.store.rm(k);
+			this._length--;
+			await this.privateUpdateNextHeadProperty(from, true);
+			return from;
+		}
 
 		let deleted = await this.properties.index.del({ query: { hash: k } });
 		await this.properties.store.rm(k);
@@ -406,7 +556,13 @@ export class EntryIndex<T> {
 	}
 
 	async getMemoryUsage() {
-		return this.properties.index.sum({ key: "payloadSize" });
+		const indexed =
+			(await this.properties.index.sum({ key: "payloadSize" })) || 0;
+		const pending = [...this.pendingIndexWrites.values()].reduce(
+			(sum, entry) => sum + (entry.payloadSize || 0),
+			0,
+		);
+		return typeof indexed === "bigint" ? indexed + BigInt(pending) : indexed + pending;
 	}
 
 	private async privateUpdateNextHeadProperty(
@@ -419,7 +575,10 @@ export class EntryIndex<T> {
 		}
 
 		for (const next of from.meta.next) {
-			const indexedEntry = await this.properties.index.get(toId(next));
+			const pending = this.pendingIndexWrites.get(next);
+			const indexedEntry = pending
+				? { id: toId(next), value: pending }
+				: await this.properties.index.get(toId(next));
 
 			if (!indexedEntry) {
 				continue; // we could end up here because another entry with same next ref is of CUT and has removed it from the index
@@ -429,13 +588,17 @@ export class EntryIndex<T> {
 				const noPointersToNext = (await this.countHasNext(next)) === 0;
 				if (noPointersToNext) {
 					indexedEntry.value.head = true;
-					if (indexedEntry) {
+					if (pending) {
+						this.pendingIndexWrites.set(next, indexedEntry.value);
+					} else {
 						await this.properties.index.put(indexedEntry.value);
 					}
 				}
 			} else {
 				indexedEntry.value.head = false;
-				if (indexedEntry) {
+				if (pending) {
+					this.pendingIndexWrites.set(next, indexedEntry.value);
+				} else {
 					await this.properties.index.put(indexedEntry.value);
 				}
 			}
@@ -443,16 +606,23 @@ export class EntryIndex<T> {
 	}
 
 	async clear() {
+		this.clearPendingIndexFlushTimer();
+		const hashes = new Set<string>(this.pendingIndexWrites.keys());
 		const iterator = this.iterate([], undefined, false);
 		while (!iterator.done()) {
 			const results = await iterator.next(100);
 			for (const result of results) {
-				await this.delete(result.hash);
+				hashes.add(result.hash);
 			}
 		}
+		this.pendingIndexWrites.clear();
+		for (const hash of hashes) {
+			await this.properties.store.rm(hash);
+		}
 		await this.properties.index.drop();
 		await this.properties.index.start();
 		this.cache.clear();
+		this._length = 0;
 	}
 
 	get length() {
@@ -463,6 +633,8 @@ export class EntryIndex<T> {
 	}
 
 	async init() {
+		this.clearPendingIndexFlushTimer();
+		this.pendingIndexWrites.clear();
 		this._length = await this.properties.index.getSize();
 		this.initialied = true;
 	}

package/src/entry-v0.ts

@@ -338,8 +338,7 @@ export class EntryV0<T>
 			return false;
 		}
 
-		const signable = EntryV0.toSignable(this);
-		const signableBytes = serialize(signable);
+		const signableBytes = this.getSignableBytes();
 		for (const signature of signatures) {
 			if (!(await verify(signature, signableBytes))) {
 				return false;
@@ -371,6 +370,10 @@ export class EntryV0<T>
 		return EntryV0.toSignable(this);
 	}
 
+	override getSignableBytes(): Uint8Array {
+		return serialize(EntryV0.toSignable(this));
+	}
+
 	equals(other: Entry<T>) {
 		if (other instanceof EntryV0) {
 			return (
@@ -533,7 +536,7 @@ export class EntryV0<T>
 			properties.identity.sign.bind(properties.identity),
 		];
 
-		const signableBytes = serialize(entry.toSignable());
+		const signableBytes = entry.getSignableBytes();
 		let signatures = await Promise.all(
 			signers.map((signer) => signer(signableBytes)),
 		);

package/src/entry.ts

@@ -49,6 +49,14 @@ export abstract class Entry<T> {
 	abstract getPayloadValue(): Promise<T> | T;
 	abstract toSignable(): Entry<T>;
 
+	getSignableBytes(): Uint8Array {
+		return serialize(this.toSignable());
+	}
+
+	getStorageBytes(): Uint8Array {
+		return serialize(this);
+	}
+
 	async getPublicKeys(): Promise<PublicSignKey[]> {
 		const signatures = await this.getSignatures();
 		return signatures.map((s) => s.publicKey);
@@ -76,7 +84,7 @@ export abstract class Entry<T> {
 			throw new Error("Expected hash to be missing");
 		}
 
-		const bytes = serialize(entry);
+		const bytes = entry.getStorageBytes();
 		entry.size = bytes.length;
 		return store.put(bytes);
 	}

package/src/log.ts

@@ -70,6 +70,7 @@ export type LogProperties<T> = {
 	keychain?: CryptoKeychain;
 	encoding?: Encoding<T>;
 	clock?: LamportClock;
+	appendDurability?: AppendDurability;
 	sortFn?: Sorting.SortFn;
 	trim?: TrimOptions;
 	canAppend?: CanAppend<T>;
@@ -81,7 +82,11 @@ export type LogProperties<T> = {
 
 export type LogOptions<T> = LogProperties<T> & LogEvents<T> & MemoryProperties;
 
+export type AppendDurability = "strict" | "buffered";
+
 export type AppendOptions<T> = {
+	durability?: AppendDurability;
+	deferIndexWrite?: boolean;
 	meta?: {
 		type?: EntryType;
 		gidSeed?: Uint8Array;
@@ -159,6 +164,7 @@ export class Log<T> {
 	private _closeController!: AbortController;
 	private _loadedOnce = false;
 	private _indexer!: Indices;
+	private _appendDurability!: AppendDurability;
 	private _joining!: Map<string, Promise<any>>; // entry hashes that are currently joining into this log
 	private _sortFn!: Sorting.SortFn;
 
@@ -227,6 +233,11 @@ export class Log<T> {
 			resolveRemotePeers,
 		});
 		await this._entryIndex.init();
+		this._appendDurability =
+			options.appendDurability ??
+			((await this._entryIndex.properties.index.persisted())
+				? "strict"
+				: "buffered");
 		/* 	this._values = new Values(this._entryIndex, this._sortFn); */
 
 		this._trim = new Trim(
@@ -562,6 +573,11 @@ export class Log<T> {
 			unique: true,
 			isHead: true,
 			toMultiHash: false,
+			deferIndexWrite:
+				options.deferIndexWrite ??
+				(options.durability
+					? options.durability === "buffered"
+					: this._appendDurability === "buffered"),
 		});
 
 		const pendingDeletes: (
@@ -681,17 +697,33 @@ export class Log<T> {
 			for (const element of entries) references.set(element.hash, element);
 		} else if (Array.isArray(entriesOrLog)) {
 			if (entriesOrLog.length === 0) return;
+			const existingHashes = options?.reset
+				? new Set<string>()
+				: await this.entryIndex.hasMany(
+						entriesOrLog.map((element) =>
+							typeof element === "string"
+								? element
+								: element instanceof Entry
+									? element.hash
+									: element instanceof ShallowEntry
+										? element.hash
+										: element.entry.hash,
+						),
+				  );
 
 			entries = [];
 			for (const element of entriesOrLog) {
 				if (element instanceof Entry) {
+					if (existingHashes.has(element.hash)) {
+						continue;
+					}
 					entries.push(element);
 					references.set(element.hash, element);
 					continue;
 				}
 
 				if (typeof element === "string") {
-					if ((await this.entryIndex.getShallow(element)) != null && !options?.reset) {
+					if (existingHashes.has(element)) {
 						continue; // already in log
 					}
 
@@ -709,10 +741,7 @@ export class Log<T> {
 				}
 
 				if (element instanceof ShallowEntry) {
-					if (
-						(await this.entryIndex.getShallow(element.hash)) != null &&
-						!options?.reset
-					) {
+					if (existingHashes.has(element.hash)) {
 						continue; // already in log
 					}
 
@@ -1063,6 +1092,7 @@ export class Log<T> {
 		// Don't return early here if closed = true, because "load" might create processes that needs to be closed
 		this._closed = true; // closed = true before doing below, else we might try to open the headsIndex cache because it is closed as we assume log is still open
 		this._closeController.abort();
+		await this._entryIndex.flushPendingWrites();
 		await this._indexer?.stop?.();
 		this._indexer = undefined as any;
 		this._loadedOnce = false;

package/src/trim.ts

@@ -137,11 +137,10 @@ export class Trim<T> {
 			}
 			done = async () => this._log.getLength() <= to;
 		} else if (option.type === "bytelength") {
-			// TODO calculate the sum and cache it and update it only when entries are added or removed
+			// Include buffered head-index writes so trim decisions stay correct for
+			// ephemeral/buffered append durability too.
 			const byteLengthFn = async () =>
-				BigInt(
-					await this._log.index.properties.index.sum({ key: "payloadSize" }),
-				);
+				BigInt(await this._log.index.getMemoryUsage());
 
 			// prune to max sum payload sizes in bytes
 			const byteLengthFrom = BigInt(option.from ?? option.to);