@pcircle/memesh 4.1.3 → 4.1.4

package/dist/core/types.d.ts

@@ -16,15 +16,12 @@ export interface Entity {
     access_count?: number;
     last_accessed_at?: string;
     confidence?: number;
-    valid_from?: string;
-    valid_until?: string;
-    namespace?: string;
+    namespace: 'personal' | 'team' | 'global' | string;
 }
 export interface Relation {
     from: string;
     to: string;
     type: string;
-    metadata?: any;
 }
 export interface CreateEntityInput {
     name: string;
@@ -146,40 +143,15 @@ export interface EntityRow {
     type: string;
     created_at: string;
     metadata: string | null;
-    status: string;
+    status: EntityStatus;
     access_count: number;
     last_accessed_at: string | null;
     confidence: number;
-    valid_from: string | null;
-    valid_until: string | null;
     namespace: string;
 }
-export interface ObservationRow {
-    id: number;
-    entity_id: number;
-    content: string;
-    created_at: string;
-}
-export interface TagRow {
-    id: number;
-    entity_id: number;
-    tag: string;
-}
-export interface RelationRow {
-    id: number;
-    from_entity_id: number;
-    to_entity_id: number;
-    relation_type: string;
-    metadata: string | null;
-    created_at: string;
-}
 export interface CountRow {
     c: number;
 }
-export interface FtsRow {
-    id: number;
-    name: string;
-}
 export interface PragmaColumnRow {
     cid: number;
     name: string;

package/dist/core/types.d.ts.map

@@ -1 +1 @@
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package/dist/core/version-check.d.ts

@@ -31,6 +31,5 @@ export declare function getLastUpdateCheck(currentVersion: string, options?: {
 }): UpdateCheck | null;
 export declare function getUpdateCheck(currentVersion: string, options?: GetUpdateCheckOptions): Promise<UpdateCheck | null>;
 export declare function formatUpdateCheckStatus(update: UpdateCheck | null): string[];
-export declare function getUpdateCheckPathForTests(): string;
 export {};
 //# sourceMappingURL=version-check.d.ts.map

package/dist/core/version-check.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"version-check.d.ts","sourceRoot":"","sources":["../../src/core/version-check.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAMzC,MAAM,MAAM,iBAAiB,GAAG,OAAO,GAAG,OAAO,CAAC;AAClD,MAAM,MAAM,oBAAoB,GAAG,OAAO,GAAG,QAAQ,GAAG,OAAO,GAAG,aAAa,CAAC;AAkBhF,MAAM,WAAW,WAAW;IAC1B,cAAc,EAAE,MAAM,CAAC;IACvB,aAAa,EAAE,MAAM,GAAG,IAAI,CAAC;IAC7B,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,aAAa,EAAE,MAAM,GAAG,IAAI,CAAC;IAC7B,qBAAqB,EAAE,MAAM,GAAG,IAAI,CAAC;IACrC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,eAAe,EAAE,OAAO,CAAC;IACzB,cAAc,EAAE,OAAO,CAAC;IACxB,MAAM,EAAE,iBAAiB,CAAC;IAC1B,SAAS,EAAE,oBAAoB,CAAC;IAEhC,wBAAwB,EAAE,OAAO,CAAC;IAElC,kBAAkB,EAAE,MAAM,GAAG,IAAI,CAAC;CACnC;AAED,UAAU,qBAAqB;IAC7B,YAAY,CAAC,EAAE,OAAO,QAAQ,CAAC;IAC/B,GAAG,CAAC,EAAE,IAAI,CAAC;IACX,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,eAAe,CAAC,EAAE,MAAM,CAAC;CAC1B;AAED,UAAU,qBAAsB,SAAQ,qBAAqB;IAC3D,WAAW,CAAC,EAAE,OAAO,CAAC;CACvB;AAkND,wBAAsB,cAAc,CAClC,cAAc,EAAE,MAAM,EACtB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,WAAW,CAAC,CAsKtB;AAOD,wBAAgB,kBAAkB,CAChC,cAAc,EAAE,MAAM,EACtB,OAAO,GAAE;IAAE,eAAe,CAAC,EAAE,MAAM,CAAC;IAAC,GAAG,CAAC,EAAE,IAAI,CAAA;CAAO,GACrD,WAAW,GAAG,IAAI,CAIpB;AAMD,wBAAsB,cAAc,CAClC,cAAc,EAAE,MAAM,EACtB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,WAAW,GAAG,IAAI,CAAC,CAS7B;AAeD,wBAAgB,uBAAuB,CAAC,MAAM,EAAE,WAAW,GAAG,IAAI,GAAG,MAAM,EAAE,CA2E5E"}

package/dist/core/version-check.js

@@ -2,7 +2,6 @@ import fs from 'fs';
 import path from 'path';
 import os from 'os';
 import { execFile } from 'child_process';
-const UPDATE_CHECK_PATH = path.join(os.homedir(), '.memesh', 'update-check.json');
 const DEFAULT_TIMEOUT_MS = 5000;
 const STALE_AFTER_MS = 24 * 60 * 60 * 1000;
 const MAX_ERROR_LENGTH = 160;
@@ -312,7 +311,4 @@ export function formatUpdateCheckStatus(update) {
     }
     return lines;
 }
-export function getUpdateCheckPathForTests() {
-    return UPDATE_CHECK_PATH;
-}
 //# sourceMappingURL=version-check.js.map

package/dist/core/version-check.js.map

@@ -1 +1 @@
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package/dist/db.d.ts

@@ -1,5 +1,12 @@
 import Database from 'better-sqlite3';
 export declare function openDatabase(dbPath?: string): Database.Database;
+export declare function getPendingReindexInfo(): {
+    from: number;
+    to: number;
+    droppedAt: string;
+} | null;
+export declare function clearPendingReindexFlag(): void;
 export declare function closeDatabase(): void;
 export declare function getDatabase(): Database.Database;
+export declare function isDatabaseOpen(): boolean;
 //# sourceMappingURL=db.d.ts.map

package/dist/db.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../src/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AAoEtC,wBAAgB,YAAY,CAAC,MAAM,CAAC,EAAE,MAAM,GAAG,QAAQ,CAAC,QAAQ,CA8E/D;AAsDD,wBAAgB,aAAa,IAAI,IAAI,CAKpC;AAED,wBAAgB,WAAW,IAAI,QAAQ,CAAC,QAAQ,CAG/C"}
+{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../src/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AAqEtC,wBAAgB,YAAY,CAAC,MAAM,CAAC,EAAE,MAAM,GAAG,QAAQ,CAAC,QAAQ,CA6F/D;AA2DD,wBAAgB,qBAAqB,IAAI;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,EAAE,EAAE,MAAM,CAAC;IAAC,SAAS,EAAE,MAAM,CAAA;CAAE,GAAG,IAAI,CAU9F;AAED,wBAAgB,uBAAuB,IAAI,IAAI,CAG9C;AAiHD,wBAAgB,aAAa,IAAI,IAAI,CAKpC;AAED,wBAAgB,WAAW,IAAI,QAAQ,CAAC,QAAQ,CAG/C;AAQD,wBAAgB,cAAc,IAAI,OAAO,CAExC"}

package/dist/db.js

@@ -5,6 +5,7 @@ import os from 'os';
 import fs from 'fs';
 import { runAutoDecay } from './core/lifecycle.js';
 import { getEmbeddingDimension } from './core/config.js';
+import { computeSignalScore } from './core/signal-scorer.js';
 let db = null;
 const SCHEMA_SQL = `
 CREATE TABLE IF NOT EXISTS entities (
@@ -111,6 +112,8 @@ export function openDatabase(dbPath) {
         db.exec("ALTER TABLE entities ADD COLUMN recall_misses INTEGER DEFAULT 0");
     }
     runAutoDecay(db);
+    backfillSignalScores(db);
+    ensureDreamProposalsTable(db);
     sqliteVec.load(db);
     const targetDim = getEmbeddingDimension();
     ensureVecTable(db, targetDim);
@@ -134,6 +137,7 @@ function ensureVecTable(db, targetDim) {
             `MeMesh: Old embeddings deleted. Run 'memesh reindex' to regenerate vectors for all entities.\n` +
             `MeMesh: Without reindex, only newly accessed entities will be embedded.\n`);
         db.exec('DROP TABLE entities_vec');
+        db.prepare("INSERT OR REPLACE INTO memesh_metadata (key, value) VALUES ('pending_reindex', ?)").run(JSON.stringify({ from: currentDim, to: targetDim, droppedAt: new Date().toISOString() }));
     }
     db.exec(`
     CREATE VIRTUAL TABLE IF NOT EXISTS entities_vec USING vec0(
@@ -142,6 +146,90 @@ function ensureVecTable(db, targetDim) {
   `);
     db.prepare("INSERT OR REPLACE INTO memesh_metadata (key, value) VALUES ('embedding_dimension', ?)").run(String(targetDim));
 }
+export function getPendingReindexInfo() {
+    if (!db)
+        return null;
+    try {
+        const row = db.prepare("SELECT value FROM memesh_metadata WHERE key = 'pending_reindex'").get();
+        return row ? JSON.parse(row.value) : null;
+    }
+    catch {
+        return null;
+    }
+}
+export function clearPendingReindexFlag() {
+    if (!db)
+        return;
+    db.prepare("DELETE FROM memesh_metadata WHERE key = 'pending_reindex'").run();
+}
+function ensureDreamProposalsTable(db) {
+    db.exec(`
+    CREATE TABLE IF NOT EXISTS dream_proposals (
+      id INTEGER PRIMARY KEY AUTOINCREMENT,
+      project TEXT NOT NULL,
+      cluster_key TEXT NOT NULL,
+      source_ids TEXT NOT NULL,
+      proposed_digest TEXT NOT NULL,
+      llm_model TEXT,
+      prompt_version TEXT NOT NULL DEFAULT 'v1',
+      status TEXT NOT NULL DEFAULT 'pending',
+      reason TEXT,
+      created_at TIMESTAMP DEFAULT CURRENT_TIMESTAMP,
+      reviewed_at TIMESTAMP
+    );
+    CREATE INDEX IF NOT EXISTS idx_dream_proposals_status ON dream_proposals(status);
+    CREATE INDEX IF NOT EXISTS idx_dream_proposals_project ON dream_proposals(project);
+  `);
+}
+function backfillSignalScores(db) {
+    db.exec(`
+    CREATE TABLE IF NOT EXISTS memesh_metadata (
+      key   TEXT PRIMARY KEY,
+      value TEXT NOT NULL
+    )
+  `);
+    const MARKER = 'signal_score_backfill_v1';
+    const done = db.prepare("SELECT value FROM memesh_metadata WHERE key = ?").get(MARKER);
+    if (done)
+        return;
+    const rows = db.prepare('SELECT id, name, type, metadata FROM entities').all();
+    if (rows.length === 0) {
+        db.prepare("INSERT OR REPLACE INTO memesh_metadata (key, value) VALUES (?, ?)").run(MARKER, new Date().toISOString());
+        return;
+    }
+    const obsStmt = db.prepare('SELECT content FROM observations WHERE entity_id = ?');
+    const tagStmt = db.prepare('SELECT tag FROM tags WHERE entity_id = ?');
+    const updateStmt = db.prepare('UPDATE entities SET metadata = ? WHERE id = ?');
+    const tx = db.transaction(() => {
+        let scored = 0;
+        let skipped = 0;
+        for (const row of rows) {
+            let metadata = {};
+            try {
+                metadata = row.metadata ? JSON.parse(row.metadata) : {};
+            }
+            catch {
+                metadata = {};
+            }
+            if (typeof metadata.signal_score === 'number') {
+                skipped++;
+                continue;
+            }
+            const observations = obsStmt.all(row.id).map(o => o.content);
+            const tags = tagStmt.all(row.id).map(t => t.tag);
+            metadata.signal_score = computeSignalScore({
+                type: row.type,
+                name: row.name,
+                observations,
+                tags,
+            });
+            updateStmt.run(JSON.stringify(metadata), row.id);
+            scored++;
+        }
+        db.prepare("INSERT OR REPLACE INTO memesh_metadata (key, value) VALUES (?, ?)").run(MARKER, JSON.stringify({ at: new Date().toISOString(), scored, skipped }));
+    });
+    tx();
+}
 export function closeDatabase() {
     if (db) {
         db.close();
@@ -153,4 +241,7 @@ export function getDatabase() {
         throw new Error('Database not opened');
     return db;
 }
+export function isDatabaseOpen() {
+    return db !== null;
+}
 //# sourceMappingURL=db.js.map

package/dist/db.js.map

@@ -1 +1 @@
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package/dist/knowledge-graph.d.ts

@@ -1,6 +1,7 @@
 import Database from 'better-sqlite3';
 export type { Entity, Relation, CreateEntityInput, SearchOptions } from './core/types.js';
 import type { Entity, Relation, CreateEntityInput, SearchOptions } from './core/types.js';
+import { type TrackAccessOptions } from './storage/conflicts.js';
 export declare class KnowledgeGraph {
     private db;
     constructor(db: Database.Database);
@@ -10,9 +11,10 @@ export declare class KnowledgeGraph {
         tags?: string[];
         metadata?: any;
         namespace?: string;
+        trustOverride?: 'trusted' | 'untrusted';
     }): number;
     createEntitiesBatch(entities: CreateEntityInput[]): void;
-    createRelation(fromName: string, toName: string, relationType: string, metadata?: any): void;
+    createRelation(fromName: string, toName: string, relationType: string): void;
     getEntity(name: string): Entity | null;
     getEntitiesByIds(ids: number[], opts?: {
         includeArchived?: boolean;
@@ -21,7 +23,7 @@ export declare class KnowledgeGraph {
     }): Entity[];
     getRelations(entityName: string): Relation[];
     search(query?: string, opts?: SearchOptions): Entity[];
-    trackAccess(entityIds: number[]): void;
+    trackAccess(entityIds: number[], opts?: TrackAccessOptions): void;
     findConflicts(entityNames: string[]): string[];
     listRecent(limit?: number, includeArchived?: boolean, namespace?: string): Entity[];
     private listRecentByTag;
@@ -35,7 +37,9 @@ export declare class KnowledgeGraph {
         removed: boolean;
         remainingObservations: number;
     };
-    private deleteEntity;
+    deleteEntity(name: string): {
+        deleted: boolean;
+    };
     private parseMetadata;
     private rebuildFts;
 }

package/dist/knowledge-graph.d.ts.map

@@ -1 +1 @@
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package/dist/knowledge-graph.js

@@ -1,5 +1,6 @@
 import { findConflicts, trackAccess } from './storage/conflicts.js';
 import { insertFtsRow, removeFromFts } from './storage/fts-index.js';
+import { computeSignalScore } from './core/signal-scorer.js';
 export class KnowledgeGraph {
     db;
     constructor(db) {
@@ -18,9 +19,18 @@ export class KnowledgeGraph {
             .run(nextMetadata ? JSON.stringify(nextMetadata) : null, name);
     }
     createEntity(name, type, opts) {
+        const incomingMetadata = (opts?.metadata && typeof opts.metadata === 'object') ? { ...opts.metadata } : {};
+        if (incomingMetadata.signal_score === undefined) {
+            incomingMetadata.signal_score = computeSignalScore({
+                type,
+                name,
+                observations: opts?.observations ?? [],
+                tags: opts?.tags ?? [],
+            });
+        }
         const insertResult = this.db
             .prepare('INSERT OR IGNORE INTO entities (name, type, metadata, namespace) VALUES (?, ?, ?, ?)')
-            .run(name, type, opts?.metadata ? JSON.stringify(opts.metadata) : null, opts?.namespace ?? 'personal');
+            .run(name, type, JSON.stringify(incomingMetadata), opts?.namespace ?? 'personal');
         const isNewEntity = insertResult.changes > 0;
         const row = this.db
             .prepare('SELECT id, status FROM entities WHERE name = ?')
@@ -37,6 +47,20 @@ export class KnowledgeGraph {
             : this.db
                 .prepare('SELECT content FROM observations WHERE entity_id = ?')
                 .all(entityId);
+        if (!isNewEntity && !wasArchived) {
+            const prevSet = new Set(prevObs.map((o) => o.content));
+            const introducesNewObservation = (opts?.observations ?? []).some((o) => !prevSet.has(o));
+            const trustFromMetadata = opts?.metadata && typeof opts.metadata === 'object'
+                ? opts.metadata.trust
+                : undefined;
+            const incomingTrust = opts?.trustOverride ?? trustFromMetadata;
+            const isTrusted = incomingTrust === undefined || incomingTrust === 'trusted';
+            if (introducesNewObservation && isTrusted) {
+                this.db
+                    .prepare('UPDATE entities SET confidence = MIN(confidence + 0.05, 1.0) WHERE id = ?')
+                    .run(entityId);
+            }
+        }
         const prevObsText = isNewEntity || wasArchived
             ? undefined
             : prevObs.map((o) => o.content).join(' ');
@@ -68,7 +92,7 @@ export class KnowledgeGraph {
         });
         txn();
     }
-    createRelation(fromName, toName, relationType, metadata) {
+    createRelation(fromName, toName, relationType) {
         const fromRow = this.db
             .prepare('SELECT id FROM entities WHERE name = ?')
             .get(fromName);
@@ -82,12 +106,12 @@ export class KnowledgeGraph {
             throw new Error(`Entity not found: ${toName}`);
         }
         this.db
-            .prepare('INSERT OR IGNORE INTO relations (from_entity_id, to_entity_id, relation_type, metadata) VALUES (?, ?, ?, ?)')
-            .run(fromRow.id, toRow.id, relationType, metadata ? JSON.stringify(metadata) : null);
+            .prepare('INSERT OR IGNORE INTO relations (from_entity_id, to_entity_id, relation_type) VALUES (?, ?, ?)')
+            .run(fromRow.id, toRow.id, relationType);
     }
     getEntity(name) {
         const row = this.db
-            .prepare('SELECT id, name, type, created_at, metadata, status, access_count, last_accessed_at, confidence, valid_from, valid_until, namespace FROM entities WHERE name = ?')
+            .prepare('SELECT id, name, type, created_at, metadata, status, access_count, last_accessed_at, confidence, namespace FROM entities WHERE name = ?')
             .get(name);
         if (!row)
             return null;
@@ -113,8 +137,6 @@ export class KnowledgeGraph {
             access_count: row.access_count ?? 0,
             last_accessed_at: row.last_accessed_at ?? undefined,
             confidence: row.confidence ?? 1.0,
-            valid_from: row.valid_from ?? undefined,
-            valid_until: row.valid_until ?? undefined,
             namespace: row.namespace ?? 'personal',
         };
     }
@@ -128,7 +150,7 @@ export class KnowledgeGraph {
         if (opts?.namespace)
             params.push(opts.namespace);
         const entityRows = this.db
-            .prepare(`SELECT id, name, type, created_at, metadata, status, access_count, last_accessed_at, confidence, valid_from, valid_until, namespace
+            .prepare(`SELECT id, name, type, created_at, metadata, status, access_count, last_accessed_at, confidence, namespace
          FROM entities WHERE id IN (${placeholders}) ${statusFilter} ${namespaceFilter}`)
             .all(...params);
         const entityMap = new Map();
@@ -155,7 +177,7 @@ export class KnowledgeGraph {
         }
         const relRows = this.db
             .prepare(`SELECT r.from_entity_id, e_from.name AS "from", e_to.name AS "to",
-                r.relation_type AS type, r.metadata
+                r.relation_type AS type
          FROM relations r
          JOIN entities e_from ON r.from_entity_id = e_from.id
          JOIN entities e_to ON r.to_entity_id = e_to.id
@@ -169,7 +191,6 @@ export class KnowledgeGraph {
                 from: row.from,
                 to: row.to,
                 type: row.type,
-                metadata: row.metadata ? JSON.parse(row.metadata) : undefined,
             });
         }
         const results = [];
@@ -195,8 +216,6 @@ export class KnowledgeGraph {
                 access_count: row.access_count ?? 0,
                 last_accessed_at: row.last_accessed_at ?? undefined,
                 confidence: row.confidence ?? 1.0,
-                valid_from: row.valid_from ?? undefined,
-                valid_until: row.valid_until ?? undefined,
                 namespace: row.namespace ?? 'personal',
             });
         }
@@ -204,7 +223,7 @@ export class KnowledgeGraph {
     }
     getRelations(entityName) {
         const rows = this.db
-            .prepare(`SELECT e_from.name AS "from", e_to.name AS "to", r.relation_type AS type, r.metadata
+            .prepare(`SELECT e_from.name AS "from", e_to.name AS "to", r.relation_type AS type
          FROM relations r
          JOIN entities e_from ON r.from_entity_id = e_from.id
          JOIN entities e_to ON r.to_entity_id = e_to.id
@@ -214,7 +233,6 @@ export class KnowledgeGraph {
             from: r.from,
             to: r.to,
             type: r.type,
-            metadata: r.metadata ? JSON.parse(r.metadata) : undefined,
         }));
     }
     search(query, opts) {
@@ -307,11 +325,11 @@ export class KnowledgeGraph {
             results.push(...archivedEntities);
         }
         const entityIds = results.map((e) => e.id);
-        this.trackAccess(entityIds);
+        this.trackAccess(entityIds, { incrementHits: true });
         return results;
     }
-    trackAccess(entityIds) {
-        trackAccess(this.db, entityIds);
+    trackAccess(entityIds, opts = {}) {
+        trackAccess(this.db, entityIds, opts);
     }
     findConflicts(entityNames) {
         return findConflicts(this.db, entityNames);
@@ -354,7 +372,7 @@ export class KnowledgeGraph {
             .map((r) => this.getEntity(r.name))
             .filter((e) => e !== null);
         const entityIds = results.map((e) => e.id);
-        this.trackAccess(entityIds);
+        this.trackAccess(entityIds, { incrementHits: true });
         return results;
     }
     clearEntityData(name) {
@@ -429,6 +447,13 @@ export class KnowledgeGraph {
             .all(row.id);
         const obsText = allObs.map((o) => o.content).join(' ');
         removeFromFts(this.db, row.id, name, obsText);
+        try {
+            this.db
+                .prepare('DELETE FROM entities_vec WHERE rowid = ?')
+                .run(BigInt(row.id));
+        }
+        catch {
+        }
         this.db.prepare('DELETE FROM entities WHERE id = ?').run(row.id);
         return { deleted: true };
     }