@paradigma-inc/flywheel 0.2.51 → 0.2.66

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@paradigma-inc/flywheel",
-  "version": "0.2.51",
+  "version": "0.2.66",
   "description": "One-command setup for Flywheel MCP hosts",
   "type": "module",
   "files": [

package/skills/flywheel-repo/SKILL.md

@@ -33,7 +33,7 @@ Not for: direct hosted node edits (`hosted:node:*`, `hosted:tag:*`, and every ot
 Each phase names its commands only; look up flags with `flywheel help <command>`.
 
 1. Obtain a local repository: `repo:init` creates or adopts only the selected local repository, `repo:clone` reads an existing hosted projection v4 repository, and `repo:restore` reads a backup archive. Then run `repo:status` to confirm the repository is selected and healthy.
-2. Read before writing: `repo:node:get`, `repo:lineage:list`, `repo:tag:list`, `repo:edge:list`, `repo:edge:get`, `repo:containment:list`, `repo:containment:get`, and the artifact reads (`repo:artifact:get`, `repo:artifact:download`, `repo:node-artifact:list`, `repo:edge-artifact:list`). These default to committed local state; the staged option described in each command's help shows pending work instead. Lineage rows name `parent_repository_id`; `boundary:true` means the parent remains in another repository and is not a missing local node.
+2. Read before writing: `repo:node:list` discovers local nodes and empty containers without a target ID; `repo:node:get`, `repo:lineage:list`, `repo:tag:list`, `repo:edge:list`, `repo:edge:get`, `repo:containment:list`, `repo:containment:get`, and the artifact reads (`repo:artifact:get`, `repo:artifact:download`, `repo:node-artifact:list`, `repo:edge-artifact:list`) inspect them. These default to committed local state; `--staged` in each command's help shows pending work instead. Lineage rows name `parent_repository_id`; `boundary:true` means the parent remains in another repository and is not a missing local node.
 3. Stage changes with the node, tag, relation, and artifact commands listed in the reference file. Every `repo:` mutation stages in the selected local repository; nothing is committed or placed in a different repository.
 4. Review with `repo:diff` (its staged option shows the complete pending result). Discard with `repo:staging:discard` only on request.
 5. Commit with `repo:commit`; the commit keeps its immutable author if another principal later pushes it. Inspect history with `repo:log`; undo a commit with `repo:revert`, which stages inverse operations for the reversible changes of that commit.

package/skills/flywheel-repo/references/repository-commands.md

@@ -17,8 +17,9 @@ Each line names a command and its summary; run `flywheel help <command>` (add `-
 
 ### Read committed or staged content
 
+- `flywheel repo:node:list`: Discover local nodes, including empty containers and tombstoned nodes; use --staged for pending nodes and --after for the next 256-item page (committed pages also require --at_head).
 - `flywheel repo:node:get`: Read one node and its comparison digests. Defaults to committed local state; use --staged to inspect saved pending work.
-- `flywheel repo:tag:list`: List tags and holder digests. Defaults to committed local state; use --staged to inspect saved pending work.
+- `flywheel repo:tag:list`: List tags with each holder's node_id and holder_digest. Defaults to committed local state; use --staged to inspect saved pending work.
 - `flywheel repo:lineage:list`: List lineage relations with `parent_repository_id` and boundary status. Defaults to committed local state; use --staged to inspect saved pending work.
 - `flywheel repo:node-artifact:list`: List node artifact references. Defaults to committed local state; use --staged to inspect saved pending work.
 - `flywheel repo:edge-artifact:list`: List edge artifact references. Defaults to committed local state; use --staged to inspect saved pending work.
@@ -33,7 +34,7 @@ Each line names a command and its summary; run `flywheel help <command>` (add `-
 
 - `flywheel repo:node:create`: Stage a root node in the selected local repository from --title or the full six-field JSON values file; this command never creates or selects another repository.
 - `flywheel repo:node:set`: Stage a new value for one field of a node.
-- `flywheel repo:node:tombstone`: Stage the removal of a node; its history and its semantic edges stay in the repository.
+- `flywheel repo:node:tombstone`: Stage the reversible removal of a node (a later restore undoes it); its history, semantic edges, containment, tags, and attachments stay in the repository. Lineage links must be removed first; a refusal (`repository_node_tombstone_blocked`) lists each remaining link and the exact removal commands.
 - `flywheel repo:node:restore`: Stage the restoration of a tombstoned node; retained semantic edges never block it.
 - `flywheel repo:node:branch`: Stage one branched node in the selected local repository and one lineage relation copying the source's title.
 - `flywheel repo:node:merge`: Stage one merged node in the selected local repository and one lineage relation from each supplied source, in argument order.
@@ -49,7 +50,7 @@ Each line names a command and its summary; run `flywheel help <command>` (add `-
 ### Stage changes (relations)
 
 - `flywheel repo:lineage:add`: Stage a parent-child lineage relation between two nodes.
-- `flywheel repo:lineage:remove`: Stage the removal of a lineage relation.
+- `flywheel repo:lineage:remove`: Stage the removal of a lineage relation; add `--parent-repository-id <repository>` when the parent is held by another repository.
 - `flywheel repo:containment:assign`: Stage placing a node inside a container node.
 - `flywheel repo:containment:remove`: Stage the removal of a containment relation.
 - `flywheel repo:edge:add`: Stage an edge between distinct descendants of a graph in this repository.
@@ -79,8 +80,8 @@ Each line names a command and its summary; run `flywheel help <command>` (add `-
 - `flywheel repo:conflicts:list`: List structured rebase conflicts.
 - `flywheel repo:conflicts:show`: Show one structured conflict.
 - `flywheel repo:conflicts:resolve`: Resolve one structured conflict.
-- `flywheel repo:rebase:continue`: Continue one exact rebase.
-- `flywheel repo:rebase:abort`: Abort one exact rebase.
+- `flywheel repo:rebase:continue`: Continue one exact rebase: replay every local commit, including ones made while it was open, and keep pending edits that still apply; conflicts those later commits add or change leave it open.
+- `flywheel repo:rebase:abort`: Abort one exact rebase, keeping every local commit and pending edit, including ones made while it was open.
 - `flywheel repo:push`: Publish local commits to the hosted repository (use --create-remote for the first publication). `repository_node_departed` names `current_repository_id`; the push is never redirected.
 - `flywheel repo:recover-departed`: Clone `current_repository_id` and atomically replay the selected source checkout's unpublished commits there in one client-side follow-up.
 
@@ -88,7 +89,7 @@ Each line names a command and its summary; run `flywheel help <command>` (add `-
 
 - `flywheel repo:backup`: Create and verify a local repository backup.
 - `flywheel repo:gc`: Delete local artifact objects that no commit, staging entry, or backup still references.
-- `flywheel repo:purge`: Permanently remove one node from the hosted repository and local history (irreversible; requires --confirm).
+- `flywheel repo:purge`: Permanently remove one pushed, tombstoned node that nothing references from both the hosted repository and local history (irreversible; requires --confirm). Remove its relationships first, then tombstone, commit, push, and purge; a refused purge lists what still blocks it.
 
 ### Hosted repository administration (reads)
 

package/src/runtime/required-runtime-commands.json

@@ -121,6 +121,7 @@
   "auth:credentials:clear",
   "env:list",
   "env:switch",
+  "repo:node:list",
   "repo:node:get",
   "repo:tag:list",
   "repo:lineage:list",

package/src/runtime/vendor/flywheel-cli-dist/commands/hosted-graph.js

@@ -2,7 +2,7 @@ import { createHash, randomUUID } from 'node:crypto';
 import { CliUsageError } from '../errors.js';
 import { CliHttpError } from '../http/client.js';
 import { GRAPH_MUTATION_VERBS, buildGraphOperations, } from './graph-operation.js';
-import { loadHostedRepositorySnapshot, readHostedSnapshotPrecondition, } from './hosted-repository-snapshot.js';
+import { loadHostedRepositorySnapshot, readHostedPrecondition, readHostedSnapshotPrecondition, } from './hosted-repository-snapshot.js';
 import { record } from './graph-operation-support.js';
 import { openHostedCommitReplay } from './hosted-commit-replay.js';
 import { readHostedHead } from './hosted-repository-control.js';
@@ -34,10 +34,27 @@ function validateHostedCommitResponse(value, commitRequestId) {
     return undefined;
 }
 function hostedGraphContext(context, targetRepositoryId, readGraphFile) {
+    // Set only when the server predates the projection-rows route (FLY-1253);
+    // FLY-1258 removes this clone fallback once production serves the route.
     let snapshot;
     return {
         readPrecondition: async (path, query) => {
-            snapshot ??= loadHostedRepositorySnapshot(context, targetRepositoryId);
+            if (snapshot === undefined) {
+                try {
+                    return await readHostedPrecondition(context, targetRepositoryId, path, query);
+                }
+                catch (error) {
+                    // FastAPI's answer for a route it does not have. The route's own
+                    // refusals carry a detail such as `repository_not_found` instead.
+                    const routeMissing = error instanceof CliHttpError &&
+                        error.status === 404 &&
+                        record(error.body).detail === 'Not Found';
+                    if (!routeMissing)
+                        throw error;
+                    // Concurrent reads (branch and merge sources) share one clone.
+                    snapshot ??= loadHostedRepositorySnapshot(context, targetRepositoryId);
+                }
+            }
             return readHostedSnapshotPrecondition(await snapshot, path, query);
         },
         readFile: readGraphFile,

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package/src/runtime/vendor/flywheel-cli-dist/commands/hosted-repository-snapshot.js

@@ -96,59 +96,111 @@ export async function loadHostedRepositorySnapshot(context, repositoryId) {
     }
     return parseSnapshot(decoded.bytes, repositoryId);
 }
-export function readHostedSnapshotPrecondition(snapshot, path, query) {
+// The tables GET /repositories/{id}/projection-rows answers for each kind.
+const PROJECTION_ROW_TABLES = {
+    node: ['nodes', 'tag_assignments'],
+    node_artifacts: ['artifact_references', 'artifacts'],
+    edge: ['semantic_edges'],
+    edge_artifacts: ['artifact_references', 'artifacts'],
+    tag_scope: ['tag_definitions'],
+    containment: ['containments'],
+    artifact: ['artifacts', 'artifact_references'],
+};
+function preconditionTarget(path, query) {
     const ownerArtifacts = path.match(/^\/(nodes|edges)\/([^/]+)\/artifacts$/u);
     if (ownerArtifacts) {
-        const kind = ownerArtifacts[1] === 'nodes' ? 'node' : 'edge';
-        const ownerId = decodeURIComponent(ownerArtifacts[2]);
-        const artifacts = new Map(snapshot.artifacts.map((artifact) => [artifact.artifact_id, artifact]));
-        return {
-            artifacts: snapshot.artifact_references
-                .filter((reference) => reference.owner_kind === kind &&
-                reference.owner_id === ownerId &&
-                artifacts.has(reference.artifact_id))
-                .map((reference) => ({
-                ...artifacts.get(reference.artifact_id),
-                ...reference,
-            })),
-        };
-    }
-    if (path.startsWith('/nodes/')) {
-        const nodeId = decodeURIComponent(path.slice('/nodes/'.length));
-        const node = one(snapshot.nodes, 'node_id', nodeId);
         return {
-            field_digests: Object.fromEntries(NODE_FIELDS.map((field) => [field, node[`${field}_digest`]])),
-            lifecycle_digest: digest(node.lifecycle_state),
-            node,
-            tag_relation_digests: snapshot.tag_assignments
-                .filter((assignment) => assignment.node_id === nodeId)
-                .map((assignment) => digest(assignment)),
+            kind: ownerArtifacts[1] === 'nodes' ? 'node_artifacts' : 'edge_artifacts',
+            id: decodeURIComponent(ownerArtifacts[2]),
         };
     }
     if (path === '/tags') {
         const scopeNodeId = query?.scope_node_id;
-        return {
-            tags: snapshot.tag_definitions.filter((definition) => definition.scope_node_id === scopeNodeId),
-        };
+        if (scopeNodeId === undefined) {
+            throw new Error('repository tag precondition requires scope_node_id');
+        }
+        return { kind: 'tag_scope', id: scopeNodeId };
     }
-    if (path.startsWith('/containments/')) {
-        return {
-            containment: one(snapshot.containments, 'containment_id', decodeURIComponent(path.slice('/containments/'.length))),
-        };
+    for (const [prefix, kind] of [
+        ['/nodes/', 'node'],
+        ['/containments/', 'containment'],
+        ['/edges/', 'edge'],
+        ['/artifacts/', 'artifact'],
+    ]) {
+        if (path.startsWith(prefix)) {
+            return { kind, id: decodeURIComponent(path.slice(prefix.length)) };
+        }
     }
-    if (path.startsWith('/edges/')) {
-        return {
-            edge: one(snapshot.semantic_edges, 'edge_id', decodeURIComponent(path.slice('/edges/'.length))),
-        };
+    throw new Error(`unsupported repository precondition path: ${path}`);
+}
+/**
+ * Read a hosted edit's current values through one projection-rows request
+ * (FLY-1253). The server answers with the snapshot rows naming the entity,
+ * so the values match what a full clone snapshot gives for the same path.
+ */
+export async function readHostedPrecondition(context, repositoryId, path, query) {
+    const target = preconditionTarget(path, query);
+    const response = record(await context.requestJson('GET', `/repositories/${encodeURIComponent(repositoryId)}/projection-rows`, { query: { kind: target.kind, id: target.id } }));
+    const rows = record(response.rows);
+    const tables = PROJECTION_ROW_TABLES[target.kind];
+    if (response.repository_id !== repositoryId ||
+        Object.keys(rows).sort().join(',') !== [...tables].sort().join(',') ||
+        tables.some((table) => {
+            const tableRows = rows[table];
+            return (!Array.isArray(tableRows) ||
+                tableRows.some((row) => row === null || typeof row !== 'object' || Array.isArray(row)));
+        })) {
+        throw new Error('repository projection rows are invalid');
     }
-    if (path.startsWith('/artifacts/')) {
-        const artifactId = decodeURIComponent(path.slice('/artifacts/'.length));
-        return {
-            artifact: one(snapshot.artifacts, 'artifact_id', artifactId),
-            references: snapshot.artifact_references.filter((reference) => reference.artifact_id === artifactId),
-        };
+    return readPreconditionRows(rows, target);
+}
+export function readHostedSnapshotPrecondition(snapshot, path, query) {
+    return readPreconditionRows(snapshot, preconditionTarget(path, query));
+}
+function readPreconditionRows(rows, { kind, id }) {
+    const artifacts = rows.artifacts ?? [];
+    const references = rows.artifact_references ?? [];
+    switch (kind) {
+        case 'node_artifacts':
+        case 'edge_artifacts': {
+            const ownerKind = kind === 'node_artifacts' ? 'node' : 'edge';
+            const byId = new Map(artifacts.map((artifact) => [artifact.artifact_id, artifact]));
+            return {
+                artifacts: references
+                    .filter((reference) => reference.owner_kind === ownerKind &&
+                    reference.owner_id === id &&
+                    byId.has(reference.artifact_id))
+                    .map((reference) => ({
+                    ...byId.get(reference.artifact_id),
+                    ...reference,
+                })),
+            };
+        }
+        case 'node': {
+            const node = one(rows.nodes ?? [], 'node_id', id);
+            return {
+                field_digests: Object.fromEntries(NODE_FIELDS.map((field) => [field, node[`${field}_digest`]])),
+                lifecycle_digest: digest(node.lifecycle_state),
+                node,
+                tag_relation_digests: (rows.tag_assignments ?? [])
+                    .filter((assignment) => assignment.node_id === id)
+                    .map((assignment) => digest(assignment)),
+            };
+        }
+        case 'tag_scope':
+            return {
+                tags: (rows.tag_definitions ?? []).filter((definition) => definition.scope_node_id === id),
+            };
+        case 'containment':
+            return { containment: one(rows.containments ?? [], 'containment_id', id) };
+        case 'edge':
+            return { edge: one(rows.semantic_edges ?? [], 'edge_id', id) };
+        case 'artifact':
+            return {
+                artifact: one(artifacts, 'artifact_id', id),
+                references: references.filter((reference) => reference.artifact_id === id),
+            };
     }
-    throw new Error(`unsupported repository precondition path: ${path}`);
 }
 function decodeSnapshotFrames(frames) {
     let snapshotDigest = null;

package/src/runtime/vendor/flywheel-cli-dist/commands/hosted-repository-snapshot.js.map

@@ -1 +1 @@
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package/src/runtime/vendor/flywheel-cli-dist/commands/registry/hosted.js

@@ -82,7 +82,8 @@ function hostedDefinition(verb) {
     const optional = local.optional.filter((parameter) => parameter.name !== 'schema' &&
         parameter.name !== 'repo' &&
         parameter.name !== 'personal');
-    if (verb === 'lineage:add' || verb === 'lineage:remove') {
+    // Hosted removal inherits the parameter from the local removal command.
+    if (verb === 'lineage:add') {
         optional.push(PARENT_REPOSITORY_ID);
     }
     const examples = local.examples.slice(0, 1).map((example) => ({

package/src/runtime/vendor/flywheel-cli-dist/commands/registry/hosted.js.map

@@ -1 +1 @@
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