@oxagen/cli 0.6.1 → 0.6.2

package/dist/agent/fleet/git-isolation.js

@@ -1,290 +0,0 @@
-/**
- * Git isolation protocol for the fleet — the safety layer that makes it
- * *physically impossible* for two parallel subagents to clobber each other's
- * files, and that makes it *impossible to lose* any work an agent committed.
- *
- * The original fleet ran every subagent against one shared working tree and
- * tried to avoid collisions with a guess: tasks whose *predicted* `files[]`
- * overlapped were serialized. That guess fails the moment an agent edits a file
- * it didn't predict — two writes interleave and you get a half-written file,
- * before any commit exists to recover from. The fix is not "commit more
- * cleverly", it's isolation: give each agent its own checkout.
- *
- * The model (a correct, minimal version of "branch-per-change, replay-on-merge"):
- *
- *   1. SPAWN   — each task gets its own `git worktree` on its own branch, cut
- *                from a single frozen base ref. Separate index, separate HEAD,
- *                separate files: file-level clobbering is now structurally
- *                impossible, not merely discouraged.
- *   2. CHECKPOINT — the agent's changes are committed atomically, and every
- *                commit hash is pinned under `refs/oxagen/agents/<task>/<n>`.
- *                A pinned commit is content-addressed and immune to branch
- *                deletion and `git gc`: work can be orphaned but never lost.
- *   3. INTEGRATE — task branches are merged back into one integration branch
- *                *one at a time* (a mutex), with `rerere` enabled. A merge that
- *                conflicts is **aborted**, leaving the integration tree clean,
- *                and the conflict is *surfaced* (the files are returned) instead
- *                of silently corrupting anything. Conflicts are relocated to an
- *                explicit, owned step — they are not made to disappear, because
- *                for *code* that is impossible in general (two semantically
- *                contradictory edits can't both be right).
- *   4. DISPOSE  — worktrees and branches are torn down, but the
- *                `refs/oxagen/agents/*` pins are kept. `git for-each-ref
- *                refs/oxagen/agents` is then a durable log of every atomic
- *                change the fleet ever made, recoverable by hash.
- *
- * Git is shelled via {@link GitRunner} (injectable) so the orchestrator's unit
- * tests stay filesystem-free; the real runner uses `node:child_process`,
- * matching the rest of the CLI (no git library dependency).
- */
-import { execFile } from "node:child_process";
-import { mkdirSync, existsSync, readFileSync, appendFileSync } from "node:fs";
-import { join } from "node:path";
-import { promisify } from "node:util";
-const pexec = promisify(execFile);
-/** The real runner: `git <args>` via child_process, rooted at the repo. */
-export function defaultGitRunner(repoRoot) {
-    return async (args, cwd) => {
-        try {
-            const { stdout, stderr } = await pexec("git", args, {
-                cwd: cwd ?? repoRoot,
-                maxBuffer: 64 * 1024 * 1024,
-            });
-            return { stdout, stderr, code: 0 };
-        }
-        catch (e) {
-            const err = e;
-            return {
-                stdout: err.stdout ?? "",
-                stderr: err.stderr ?? err.message ?? "",
-                code: typeof err.code === "number" ? err.code : 1,
-            };
-        }
-    };
-}
-/** Allowed characters in a branch/path segment derived from a task id. */
-function safeSegment(id) {
-    return id.replace(/[^A-Za-z0-9._-]/g, "-").replace(/^-+|-+$/g, "") || "task";
-}
-/**
- * Owns the worktrees, branches, and durability pins for one fleet run.
- *
- * One instance per {@link Fleet}. Methods are safe to call from many concurrent
- * agents: `spawn`/`checkpoint`/`dispose` operate on disjoint worktrees, and
- * `integrate` is serialized internally so two merges never race on the
- * integration branch.
- */
-export class WorktreeManager {
-    opts;
-    git;
-    ns;
-    repoRoot;
-    root;
-    /** The frozen commit every task branch is cut from. */
-    baseRef = "";
-    /** Lazily-created integration worktree path + branch. */
-    integration = null;
-    initialized = false;
-    /** Per-task pin sequence + recorded checkpoints (the durability log). */
-    seq = new Map();
-    commits = new Map();
-    /** Worktrees handed out, by task id. */
-    worktrees = new Map();
-    /** Serializes `integrate` so concurrent finishers can't race the merge. */
-    integrateLock = Promise.resolve();
-    constructor(opts) {
-        this.opts = opts;
-        this.git = opts.git ?? defaultGitRunner(opts.repoRoot);
-        this.ns = safeSegment(opts.namespace ?? "fleet");
-        this.repoRoot = opts.repoRoot;
-        this.root = opts.root ?? join(opts.repoRoot, ".oxagen", "worktrees");
-    }
-    /**
-     * Resolve the repo toplevel, freeze the base ref, enable `rerere`, and keep
-     * the worktree root out of git's sight. Idempotent.
-     */
-    async init() {
-        if (this.initialized)
-            return;
-        const top = await this.git(["rev-parse", "--show-toplevel"]);
-        if (top.code !== 0) {
-            throw new Error(`git isolation: not a git repository (${top.stderr.trim()})`);
-        }
-        this.repoRoot = top.stdout.trim();
-        if (!this.opts.root)
-            this.root = join(this.repoRoot, ".oxagen", "worktrees");
-        const head = await this.git(["rev-parse", "HEAD"]);
-        if (head.code !== 0)
-            throw new Error(`git isolation: cannot resolve HEAD (${head.stderr.trim()})`);
-        this.baseRef = head.stdout.trim();
-        // rerere makes repeated conflict resolutions idempotent — a resolver agent
-        // (or human) resolves a given conflict once and git replays it thereafter.
-        await this.git(["config", "rerere.enabled", "true"]);
-        this.excludeWorktreeRoot();
-        mkdirSync(this.root, { recursive: true });
-        this.initialized = true;
-    }
-    /** The frozen base every task fans out from. */
-    get base() {
-        return this.baseRef;
-    }
-    /**
-     * Create an isolated worktree for `taskId` and return its path. The agent runs
-     * with this as its `cwd`; nothing it does can touch another agent's tree.
-     */
-    async spawn(taskId) {
-        await this.init();
-        const seg = safeSegment(taskId);
-        const branch = `fleet/${this.ns}/t/${seg}`;
-        const path = join(this.root, this.ns, `t-${seg}`);
-        // A re-run may leave a stale worktree/branch behind; clear it first.
-        await this.removeWorktree(path);
-        await this.git(["branch", "-D", branch]); // ignore "not found"
-        const add = await this.git(["worktree", "add", "-b", branch, path, this.baseRef]);
-        if (add.code !== 0) {
-            throw new Error(`git isolation: worktree add failed for ${taskId}: ${add.stderr.trim()}`);
-        }
-        this.worktrees.set(taskId, { path, branch });
-        return path;
-    }
-    /**
-     * Atomically commit whatever the agent changed in its worktree and pin the
-     * commit under `refs/oxagen/agents/<task>/<n>`. Returns the checkpoint, or
-     * `null` when the agent changed nothing.
-     */
-    async checkpoint(taskId, message) {
-        const wt = this.worktrees.get(taskId);
-        if (!wt)
-            throw new Error(`git isolation: no worktree for ${taskId} (call spawn first)`);
-        await this.git(["add", "-A"], wt.path);
-        const status = await this.git(["status", "--porcelain"], wt.path);
-        if (status.code === 0 && status.stdout.trim() === "")
-            return null; // nothing changed
-        // --no-verify: these are fine-grained per-step commits; the gate runs at
-        // integration / CI, not on every micro-commit.
-        const commit = await this.git(["commit", "--no-verify", "-m", message], wt.path);
-        if (commit.code !== 0) {
-            throw new Error(`git isolation: commit failed for ${taskId}: ${commit.stderr.trim()}`);
-        }
-        const rev = await this.git(["rev-parse", "HEAD"], wt.path);
-        const hash = rev.stdout.trim();
-        const n = (this.seq.get(taskId) ?? 0) + 1;
-        this.seq.set(taskId, n);
-        const ref = `refs/oxagen/agents/${safeSegment(taskId)}/${n}`;
-        await this.git(["update-ref", ref, hash]); // pin: survives branch deletion + gc
-        const cp = { taskId, hash, ref, message };
-        const list = this.commits.get(taskId) ?? [];
-        list.push(cp);
-        this.commits.set(taskId, list);
-        return cp;
-    }
-    /** Every pinned checkpoint recorded for a task — the durability log. */
-    recordedCommits(taskId) {
-        return this.commits.get(taskId) ?? [];
-    }
-    /**
-     * Merge a task's branch into the integration branch. Serialized so two merges
-     * never race. A conflicting merge is aborted (integration tree left clean) and
-     * the conflicting files are returned — never a corrupt half-merge.
-     */
-    integrate(taskId, message) {
-        return this.withIntegrateLock(() => this.doIntegrate(taskId, message));
-    }
-    async doIntegrate(taskId, message) {
-        const wt = this.worktrees.get(taskId);
-        if (!wt)
-            throw new Error(`git isolation: no worktree for ${taskId}`);
-        const int = await this.ensureIntegration();
-        const msg = message ?? `fleet(${taskId}): integrate`;
-        const merge = await this.git(["merge", "--no-ff", "-m", msg, wt.branch], int.path);
-        if (merge.code === 0) {
-            const tip = await this.git(["rev-parse", "HEAD"], int.path);
-            return { ok: true, commit: tip.stdout.trim(), taskBranch: wt.branch };
-        }
-        // Conflict. rerere may already have replayed a recorded resolution — if no
-        // files remain unmerged, commit it and report success.
-        const unmerged = await this.git(["diff", "--name-only", "--diff-filter=U"], int.path);
-        const conflicts = unmerged.stdout.split("\n").map((l) => l.trim()).filter(Boolean);
-        if (conflicts.length === 0) {
-            const done = await this.git(["commit", "--no-verify", "--no-edit"], int.path);
-            if (done.code === 0) {
-                const tip = await this.git(["rev-parse", "HEAD"], int.path);
-                return { ok: true, commit: tip.stdout.trim(), taskBranch: wt.branch, autoResolved: true };
-            }
-        }
-        // Real conflict: abort so the integration tree stays clean, and surface it.
-        await this.git(["merge", "--abort"], int.path);
-        const tip = await this.git(["rev-parse", wt.branch]);
-        return { ok: false, conflicts, taskBranch: wt.branch, taskTip: tip.stdout.trim() };
-    }
-    /** The integration branch + its worktree path, once at least one integrate ran. */
-    integrationRef() {
-        return this.integration;
-    }
-    /**
-     * Remove a task's worktree. Keeps the branch and the `refs/oxagen/agents` pins
-     * (so nothing is lost). Pass `keep` to leave the worktree on disk — e.g. after
-     * a conflict, so a resolver agent or human can work in it.
-     */
-    async dispose(taskId, opts = {}) {
-        const wt = this.worktrees.get(taskId);
-        if (!wt || opts.keep)
-            return;
-        await this.removeWorktree(wt.path);
-        this.worktrees.delete(taskId);
-    }
-    /**
-     * Tear down every worktree and prune. Keeps the integration branch (the
-     * result) and all `refs/oxagen/agents` pins (the durability log).
-     */
-    async cleanupAll() {
-        for (const [id, wt] of this.worktrees) {
-            await this.removeWorktree(wt.path);
-            this.worktrees.delete(id);
-        }
-        if (this.integration)
-            await this.removeWorktree(this.integration.path);
-        await this.git(["worktree", "prune"]);
-    }
-    // ── internals ────────────────────────────────────────────────────────────
-    async ensureIntegration() {
-        if (this.integration)
-            return this.integration;
-        const branch = `fleet/${this.ns}/integration`;
-        const path = join(this.root, this.ns, "integration");
-        await this.removeWorktree(path);
-        await this.git(["branch", "-D", branch]);
-        const add = await this.git(["worktree", "add", "-b", branch, path, this.baseRef]);
-        if (add.code !== 0) {
-            throw new Error(`git isolation: integration worktree failed: ${add.stderr.trim()}`);
-        }
-        this.integration = { path, branch };
-        return this.integration;
-    }
-    async removeWorktree(path) {
-        if (!existsSync(path))
-            return;
-        await this.git(["worktree", "remove", "--force", path]);
-    }
-    async withIntegrateLock(fn) {
-        const run = this.integrateLock.then(fn, fn);
-        this.integrateLock = run.then(() => undefined, () => undefined);
-        return run;
-    }
-    /** Keep `.oxagen/` out of git's untracked list without touching tracked .gitignore. */
-    excludeWorktreeRoot() {
-        try {
-            const exclude = join(this.repoRoot, ".git", "info", "exclude");
-            if (!existsSync(exclude))
-                return;
-            const body = readFileSync(exclude, "utf8");
-            if (!body.split("\n").some((l) => l.trim() === ".oxagen/")) {
-                appendFileSync(exclude, `${body.endsWith("\n") ? "" : "\n"}.oxagen/\n`);
-            }
-        }
-        catch {
-            /* best-effort; isolation still works if we can't write the exclude */
-        }
-    }
-}
-//# sourceMappingURL=git-isolation.js.map

package/dist/agent/fleet/git-isolation.js.map

@@ -1 +0,0 @@
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package/dist/agent/fleet/memory.d.ts

@@ -1,21 +0,0 @@
-import type { MemoryRecord } from "./types.js";
-export interface FleetMemory {
-    /** Append a weighted lesson. Never throws — recording must not break a run. */
-    record(rec: Omit<MemoryRecord, "id" | "createdAt">): void;
-    /** Return the most relevant lessons for a query, best first. */
-    recall(query: string, opts?: {
-        limit?: number;
-        files?: string[];
-    }): MemoryRecord[];
-    /** All records, newest first (for the agents screen memory panel). */
-    all(): MemoryRecord[];
-}
-/**
- * Open (or create) the project's fleet memory. Reads are cached in-process and
- * invalidated on every write, so a long-lived REPL/agents screen sees its own
- * appends without re-reading the file each recall.
- */
-export declare function openFleetMemory(cwd: string): FleetMemory;
-/** Render recalled lessons as a compact context block for prompt injection. */
-export declare function formatLessons(records: MemoryRecord[]): string;
-//# sourceMappingURL=memory.d.ts.map

package/dist/agent/fleet/memory.d.ts.map

@@ -1 +0,0 @@
-{"version":3,"file":"memory.d.ts","sourceRoot":"","sources":["../../../src/agent/fleet/memory.ts"],"names":[],"mappings":"AAmBA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,YAAY,CAAC;AAwB/C,MAAM,WAAW,WAAW;IAC1B,+EAA+E;IAC/E,MAAM,CAAC,GAAG,EAAE,IAAI,CAAC,YAAY,EAAE,IAAI,GAAG,WAAW,CAAC,GAAG,IAAI,CAAC;IAC1D,gEAAgE;IAChE,MAAM,CAAC,KAAK,EAAE,MAAM,EAAE,IAAI,CAAC,EAAE;QAAE,KAAK,CAAC,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,EAAE,CAAA;KAAE,GAAG,YAAY,EAAE,CAAC;IACnF,sEAAsE;IACtE,GAAG,IAAI,YAAY,EAAE,CAAC;CACvB;AAQD;;;;GAIG;AACH,wBAAgB,eAAe,CAAC,GAAG,EAAE,MAAM,GAAG,WAAW,CAkExD;AAED,+EAA+E;AAC/E,wBAAgB,aAAa,CAAC,OAAO,EAAE,YAAY,EAAE,GAAG,MAAM,CAS7D"}

package/dist/agent/fleet/memory.js

@@ -1,129 +0,0 @@
-/**
- * Fleet memory — a local, dependency-free record of what the agent army builds
- * and fixes, with lexical recall.
- *
- * This complements the engram/DuckDB episodic store ({@link openSessionMemory}).
- * That store is best-effort and silently disables itself when its optional native
- * dependency is missing; this one is plain JSON Lines on disk, so memory
- * recording is *guaranteed* — which is what the user asked for ("record the
- * memories as it fixes/builds things"). It mirrors the platform's weighted
- * `agent.memory.write` shape (kind + weight + lesson) so the same lessons can be
- * promoted to the knowledge graph later.
- *
- * Recall is a transparent lexical scorer (term overlap + file overlap + weight),
- * not embeddings: it needs no model call, works offline, and is good enough to
- * surface the handful of relevant lessons that should steer the next task.
- */
-import { mkdirSync, appendFileSync, readFileSync, existsSync } from "node:fs";
-import { homedir } from "node:os";
-import { basename, dirname, join } from "node:path";
-/** Stable per-project key from the working directory name. */
-function projectKey(cwd) {
-    return basename(cwd) || "default";
-}
-function memoryPath(cwd) {
-    return join(homedir(), ".config", "oxagen", "memories", `${projectKey(cwd)}.jsonl`);
-}
-const STOPWORDS = new Set([
-    "the", "a", "an", "and", "or", "to", "of", "in", "on", "for", "with", "is",
-    "are", "be", "this", "that", "it", "as", "at", "by", "from", "into", "we",
-    "you", "i", "fix", "add", "the", "use", "code", "file", "files",
-]);
-/** Split text into lowercased, de-stopped terms for lexical scoring. */
-function terms(text) {
-    return (text.toLowerCase().match(/[a-z0-9_]+/g) ?? []).filter((t) => t.length > 2 && !STOPWORDS.has(t));
-}
-let counter = 0;
-function newId() {
-    counter = (counter + 1) % 1_000_000;
-    return `mem_${Date.now().toString(36)}_${counter.toString(36)}`;
-}
-/**
- * Open (or create) the project's fleet memory. Reads are cached in-process and
- * invalidated on every write, so a long-lived REPL/agents screen sees its own
- * appends without re-reading the file each recall.
- */
-export function openFleetMemory(cwd) {
-    const path = memoryPath(cwd);
-    let cache = null;
-    function load() {
-        if (cache)
-            return cache;
-        if (!existsSync(path)) {
-            cache = [];
-            return cache;
-        }
-        try {
-            const lines = readFileSync(path, "utf8").split("\n").filter(Boolean);
-            cache = lines
-                .map((l) => {
-                try {
-                    return JSON.parse(l);
-                }
-                catch {
-                    return null;
-                }
-            })
-                .filter((r) => r !== null);
-        }
-        catch {
-            cache = [];
-        }
-        return cache;
-    }
-    return {
-        record(rec) {
-            const full = { ...rec, id: newId(), createdAt: Date.now() };
-            try {
-                mkdirSync(dirname(path), { recursive: true });
-                appendFileSync(path, JSON.stringify(full) + "\n", "utf8");
-                if (cache)
-                    cache.push(full);
-                else
-                    cache = [full];
-            }
-            catch {
-                /* memory is best-effort — never break the run over a failed append */
-            }
-        },
-        recall(query, opts = {}) {
-            const limit = opts.limit ?? 5;
-            const qTerms = new Set(terms(query));
-            const qFiles = new Set((opts.files ?? []).map((f) => f));
-            const weightBoost = { low: 0, high: 1, critical: 2 };
-            const scored = load()
-                .map((r) => {
-                const rTerms = terms(r.lesson + " " + r.files.join(" "));
-                let overlap = 0;
-                for (const t of rTerms)
-                    if (qTerms.has(t))
-                        overlap++;
-                let fileOverlap = 0;
-                for (const f of r.files)
-                    if (qFiles.has(f))
-                        fileOverlap++;
-                const score = overlap + fileOverlap * 3 + weightBoost[r.weight];
-                return { r, score };
-            })
-                .filter((s) => s.score > 0)
-                .sort((a, b) => b.score - a.score || b.r.createdAt - a.r.createdAt);
-            return scored.slice(0, limit).map((s) => s.r);
-        },
-        all() {
-            return [...load()].sort((a, b) => b.createdAt - a.createdAt);
-        },
-    };
-}
-/** Render recalled lessons as a compact context block for prompt injection. */
-export function formatLessons(records) {
-    if (records.length === 0)
-        return "";
-    return records
-        .map((r) => {
-        const mark = r.weight === "critical" ? "‼" : r.weight === "high" ? "!" : "·";
-        const files = r.files.length ? ` [${r.files.slice(0, 3).join(", ")}]` : "";
-        return `${mark} (${r.kind}) ${r.lesson}${files}`;
-    })
-        .join("\n");
-}
-//# sourceMappingURL=memory.js.map

package/dist/agent/fleet/memory.js.map

@@ -1 +0,0 @@
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package/dist/agent/fleet/orchestrator.d.ts

@@ -1,108 +0,0 @@
-/**
- * The fleet orchestrator — an army of coding subagents working one tree at once.
- *
- * Each task is run by a subagent: the local coding loop ({@link runAgent}) on the
- * cheapest sufficient model, against the same working directory. The orchestrator
- * keeps as many running as the concurrency cap allows while respecting two safety
- * rules so parallel agents never corrupt the tree or each other:
- *
- *   1. Dependencies — a task waits until every task it `dependsOn` is `done`; if a
- *      dependency fails, the task (and its dependents) are marked `blocked`.
- *   2. File ownership — two tasks whose predicted `files` overlap are serialized,
- *      so two agents never edit the same file at the same time.
- *
- * It records a weighted memory for every task it finishes (success or failure),
- * accumulates token/cost totals, and emits a snapshot on every change for the
- * agents screen to render. `runAgent` is injected so the engine is unit-testable
- * without touching the gateway.
- */
-import { EventEmitter } from "node:events";
-import type { ProjectContext } from "../project-context.js";
-import type { AgentDefinition } from "../../agents/types.js";
-import type { FleetMemory } from "./memory.js";
-import type { PlanStore } from "./store.js";
-import type { Isolation } from "./git-isolation.js";
-import { type FleetSnapshot, type Plan } from "./types.js";
-/** The subset of {@link runAgent} the fleet depends on (injectable for tests). */
-export type AgentRunner = (opts: {
-    prompt: string;
-    cwd: string;
-    model?: string;
-    projectContext?: ProjectContext;
-    agent?: AgentDefinition;
-    readOnly?: boolean;
-    signal?: AbortSignal;
-    onText?: (delta: string) => void;
-    onToolCall?: (name: string, input: unknown) => void;
-}) => Promise<{
-    text: string;
-    steps: number;
-    usage: {
-        inputTokens?: number;
-        outputTokens?: number;
-    };
-}>;
-export interface FleetOptions {
-    cwd: string;
-    /** Max subagents running at once (default 4). */
-    concurrency?: number;
-    memory?: FleetMemory | null;
-    store?: PlanStore | null;
-    projectContext?: ProjectContext;
-    /** Named agent registry; a task's `agent` is looked up here at dispatch. */
-    agents?: Map<string, AgentDefinition>;
-    /** Inject a fake runner in tests; defaults to the real {@link runAgent}. */
-    runner?: AgentRunner;
-    /** Read-only subagents (explain, don't edit). */
-    readOnly?: boolean;
-    /**
-     * Per-task git isolation. When set, each agent runs in its own worktree and
-     * its work is checkpointed + integrated via explicit merges, so parallel
-     * agents physically cannot clobber the tree. When omitted (default), all
-     * agents share `cwd` and overlapping-file tasks are serialized instead.
-     */
-    isolation?: Isolation | null;
-}
-export declare class Fleet extends EventEmitter {
-    private readonly cwd;
-    private readonly concurrency;
-    private readonly memory;
-    private readonly store;
-    private readonly projectContext;
-    private readonly agents;
-    private readonly runner;
-    private readonly readOnly;
-    private readonly isolation;
-    private readonly tasks;
-    private readonly snapshots;
-    private readonly controllers;
-    private readonly running;
-    private planId;
-    private settle;
-    private donePromise;
-    private adhocCounter;
-    constructor(opts: FleetOptions);
-    /** Register every task in a plan (does not start it). */
-    loadPlan(plan: Plan): void;
-    /** Add one ad-hoc task (e.g. typed into the agents screen). Returns its id. */
-    dispatchPrompt(prompt: string): string;
-    /** Begin scheduling. Resolves when every task has reached a terminal state. */
-    start(): Promise<void>;
-    /** Cancel one running/queued task. */
-    cancelTask(id: string): void;
-    /** Cancel everything in flight. */
-    cancelAll(): void;
-    snapshot(): FleetSnapshot;
-    /** Fill open slots with ready tasks, honouring deps and file-ownership locks. */
-    private pump;
-    /** The next queued task whose deps are all done and whose files are free. */
-    private pickReady;
-    private run;
-    private recordSuccess;
-    private recordFailure;
-    private toSnapshot;
-    private update;
-    private emitUpdate;
-    private checkDone;
-}
-//# sourceMappingURL=orchestrator.d.ts.map

package/dist/agent/fleet/orchestrator.d.ts.map

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