@oss-autopilot/core 3.13.0 → 3.13.2

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@@ -924,13 +924,27 @@ export function getStateManager() {
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  * StateManager and Gist checkpoints will be no-ops.
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  */
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  export async function getStateManagerAsync(token) {
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- if (stateManager)
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+ // #1415: a LOCAL-mode singleton does not short-circuit when a token is
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+ // provided. The only token-bearing caller is ensureGistPersistence, which
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+ // already verified the config says `persistence: gist` — so a local
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+ // singleton here means a previous transient init failure fell back (or a
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+ // tool body lazily created the local manager before auth resolved), and
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+ // this call is the retry that must be allowed to upgrade it. The old
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+ // unconditional early return made every retry a dead no-op, permanently
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+ // latching gist-configured processes into silent local-only writes.
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+ if (stateManager && (!token || stateManager.isGistMode()))
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  return stateManager;
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  if (asyncManagerPromise)
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  return asyncManagerPromise;
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  if (token) {
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  asyncManagerPromise = StateManager.createWithGist(token)
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  .then((mgr) => {
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+ // Upgrade note: replacing a transient-fallback local singleton fixes
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+ // FUTURE operations. Mutations made during the degraded window stay
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+ // in the local state.json only — when a Gist already exists they are
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+ // NOT merged into it by this upgrade (bootstrapWithMigration seeds a
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+ // Gist from local state only on first creation). The per-call MCP
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+ // warning is the signal that those writes were at risk.
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  stateManager = mgr;
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  asyncManagerPromise = null;
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  return mgr;
@@ -949,6 +963,9 @@ export async function getStateManagerAsync(token) {
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  // marker stays in config, causing permanent cross-machine divergence.
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  if (!isTransientNetworkError(err))
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  throw err;
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+ // Intentional CLI semantics: a one-shot process warns and proceeds
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+ // local-only. Long-lived callers (MCP) detect this via the
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+ // ensureGistPersistence return status and retry on later calls.
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  warn(MODULE, `Gist initialization failed (transient network error), falling back to local-only mode: ${err}`);
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  return getStateManager();
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  });
@@ -956,39 +973,32 @@ export async function getStateManagerAsync(token) {
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  }
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  return getStateManager();
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  }
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- /**
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- * Bootstrap helper for processes that may run in Gist persistence mode.
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- *
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- * Peeks at the state file to check if Gist mode is configured. If so and a
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- * valid token is provided, pre-sets the singleton via {@link getStateManagerAsync}
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- * so subsequent synchronous {@link getStateManager} calls return the Gist-backed
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- * instance. No-op when the state file is absent, unparseable, or not in Gist mode.
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- *
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- * Consolidates identical filesystem-peek + getStateManagerAsync logic that
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- * was duplicated between the CLI bootstrap (`cli.ts`) and MCP tool bootstrap
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- * (`mcp-server/src/tools.ts`) — #1000.
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- *
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- * @param token - GitHub token with `gist` scope, or `null` to skip activation
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- *
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- * @example
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- * // CLI bootstrap
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- * await ensureGistPersistence(token);
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- */
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  export async function ensureGistPersistence(token) {
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- if (!token)
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- return;
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  let persistence;
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  try {
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  const raw = fs.readFileSync(getStatePath(), 'utf8');
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  persistence = JSON.parse(raw)?.config?.persistence;
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  }
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- catch {
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- // No state file or unreadable stay in local mode
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- return;
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- }
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- if (persistence === 'gist') {
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- await getStateManagerAsync(token);
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- }
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+ catch (err) {
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+ // A missing file is the genuine "fresh local-mode user" case. Anything
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+ // else (EACCES, EMFILE, corrupt JSON) must not be silently classified
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+ // as a local-mode CHOICE — that would re-create the #1415 latch through
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+ // a third door when the caller memoizes the answer.
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+ if (err.code === 'ENOENT')
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+ return 'local-mode';
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+ warn(MODULE, `State file unreadable during gist-persistence check (will retry): ${errorMessage(err)}`);
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+ return 'state-unreadable';
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+ }
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+ if (persistence !== 'gist')
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+ return 'local-mode';
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+ // #1415: report the distinction the MCP layer needs — "gist configured but
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+ // token missing" and "init fell back to local" both mean the process is
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+ // NOT writing to the Gist despite the config saying it should, and a
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+ // long-lived caller must keep retrying instead of memoizing the outcome.
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+ if (!token)
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+ return 'no-token';
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+ const mgr = await getStateManagerAsync(token);
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+ return mgr.isGistMode() ? 'gist' : 'degraded';
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  }
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  /**
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  * Reset the singleton StateManager instance to null. Intended for test isolation.
@@ -105,6 +105,25 @@ function recommendForOverExtension(openPRCount, dormantPRCount, overExtended) {
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  return 'open_more';
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  return null;
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  }
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+ /**
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+ * Read-only mirror of the status-override lookup (#1416): same staleness
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+ * rule as `StateManager.getStatusOverride` (an override recorded against
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+ * older activity than the PR's `updatedAt` is ignored), but with NO
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+ * auto-clear write — this module stays pure/no-I/O, and the daily and
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+ * dashboard pipelines own clearing stale overrides.
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+ */
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+ function effectiveStatus(pr, state) {
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+ if (typeof pr.url !== 'string')
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+ return pr.status;
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+ const override = state.config.statusOverrides?.[pr.url];
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+ if (!override)
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+ return pr.status;
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+ if (typeof pr.updatedAt === 'string' && pr.updatedAt > override.lastActivityAt)
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+ return pr.status;
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+ if (override.status !== 'needs_addressing' && override.status !== 'waiting_on_maintainer')
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+ return pr.status;
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+ return override.status;
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+ }
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  /**
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  * Compute the deterministic strategy signal from agent state. Returns
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  * null when state is thinner than {@link STRATEGY_MIN_PRS} merged PRs —
@@ -158,12 +177,20 @@ export function computeStrategy(state) {
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  // Capacity: read from the last digest. When no digest exists yet,
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  // default to zero (the agent has nothing to recommend without a
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  // digest). The DailyDigest schema does not store a `dormantCount`
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- // directly — derive it from the `waitingOnMaintainerPRs` array,
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- // which is the "PR flagged as awaiting maintainer review" bucket
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- // produced by `pr-monitor`.
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+ // directly — derive it from the "awaiting maintainer review" bucket.
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+ //
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+ // Status-basis reconciliation (#1416): dashboard-written digests keep RAW
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+ // statuses in `openPRs` (so override CLEARS stay visible on rebuild) while
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+ // `summary.totalActivePRs` is override-basis. Re-derive the waiting bucket
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+ // from `openPRs` through the override map so both capacity inputs share
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+ // one basis; fall back to the stored array for digests without `openPRs`
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+ // (which daily.ts builds post-override anyway).
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  const summary = state.lastDigest?.summary;
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  const openPRCount = summary?.totalActivePRs ?? 0;
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- const waiting = state.lastDigest?.waitingOnMaintainerPRs ?? [];
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+ const openPRs = (state.lastDigest?.openPRs ?? []);
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+ const waiting = openPRs.length > 0
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+ ? openPRs.filter((pr) => effectiveStatus(pr, state) === 'waiting_on_maintainer')
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+ : (state.lastDigest?.waitingOnMaintainerPRs ?? []);
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  const dormantPRCount = waiting.length;
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  // Overextended: dormant PRs spread across 2+ repos. Same definition
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  // the issue body uses.
@@ -18,6 +18,9 @@
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  *
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  * - `runComments` (commands/comments.ts): review / inline / discussion
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  * comment bodies in the `comments` CLI `--json` + MCP tool output.
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+ * - `deduplicateDigest` (formatters/json.ts) and the MCP PR resources:
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+ * `openPRs[].lastMaintainerComment.body` via {@link fenceFetchedPR}
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+ * (#1420).
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  * - `fetchPRCommentBundle` (core/pr-comments-fetcher.ts): bundle bodies
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  * feeding `guidelines fetch-corpus` (agent-only consumer).
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  * - `toDailyOutput` (commands/daily.ts): `commentedIssues[].lastResponseBody`
@@ -67,3 +70,24 @@ export declare function extractFromFence(fenced: string): string;
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  * never throws.
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  */
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  export declare function safeExtractFromFence(text: string): string;
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+ /**
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+ * Fence the attacker-controllable maintainer-comment excerpt on a FetchedPR
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+ * for agent-facing serialization (#1420). Applied at the serialization
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+ * boundary (daily/startup --json via deduplicateDigest, MCP PR resources)
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+ * rather than at fetch time: extractMaintainerActionHints parses the RAW
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+ * body inside the pipeline, and human surfaces (dashboard SPA, CLI text
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+ * mode) must not render fence markup. Returns a copy; never mutates.
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+ */
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+ export declare function fenceFetchedPR<T extends FenceablePR>(pr: T): T;
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+ /** Structural slice of FetchedPR that {@link fenceFetchedPR} needs — kept
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+ * structural to avoid an import cycle with types.ts consumers. */
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+ interface FenceablePR {
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+ repo: string;
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+ number: number;
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+ lastMaintainerComment?: {
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+ author: string;
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+ body: string;
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+ createdAt: string;
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+ };
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+ }
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+ export {};
@@ -18,6 +18,9 @@
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  *
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  * - `runComments` (commands/comments.ts): review / inline / discussion
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  * comment bodies in the `comments` CLI `--json` + MCP tool output.
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+ * - `deduplicateDigest` (formatters/json.ts) and the MCP PR resources:
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+ * `openPRs[].lastMaintainerComment.body` via {@link fenceFetchedPR}
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+ * (#1420).
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  * - `fetchPRCommentBundle` (core/pr-comments-fetcher.ts): bundle bodies
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  * feeding `guidelines fetch-corpus` (agent-only consumer).
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  * - `toDailyOutput` (commands/daily.ts): `commentedIssues[].lastResponseBody`
@@ -132,3 +135,25 @@ export function safeExtractFromFence(text) {
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  return text;
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  }
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  }
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+ /**
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+ * Fence the attacker-controllable maintainer-comment excerpt on a FetchedPR
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+ * for agent-facing serialization (#1420). Applied at the serialization
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+ * boundary (daily/startup --json via deduplicateDigest, MCP PR resources)
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+ * rather than at fetch time: extractMaintainerActionHints parses the RAW
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+ * body inside the pipeline, and human surfaces (dashboard SPA, CLI text
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+ * mode) must not render fence markup. Returns a copy; never mutates.
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+ */
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+ export function fenceFetchedPR(pr) {
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+ if (!pr.lastMaintainerComment)
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+ return pr;
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+ return {
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+ ...pr,
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+ lastMaintainerComment: {
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+ ...pr.lastMaintainerComment,
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+ body: wrapUntrustedContent(pr.lastMaintainerComment.body, `${pr.repo}#${pr.number}`, {
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+ author: pr.lastMaintainerComment.author,
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+ source: 'pr-comment',
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+ }),
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+ },
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+ };
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+ }
@@ -3,6 +3,7 @@
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  * Provides structured output that can be consumed by scripts and plugins
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  */
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  import { z } from 'zod';
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+ import { fenceFetchedPR } from '../core/untrusted-content.js';
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  export function buildStalenessWarning(info) {
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  return {
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  phase: 'gist-staleness',
@@ -43,7 +44,10 @@ export function deduplicateDigest(digest) {
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  const toUrls = (prs) => prs.map((pr) => pr.url);
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  return {
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  generatedAt: digest.generatedAt,
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- openPRs: digest.openPRs,
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+ // lastMaintainerComment.body is attacker-controllable on any public PR;
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+ // fence it at this agent-facing serialization boundary (#1420). The
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+ // digest itself keeps the raw body for pipeline parsing and human UIs.
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+ openPRs: digest.openPRs.map(fenceFetchedPR),
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  needsAddressingPRs: toUrls(digest.needsAddressingPRs),
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  waitingOnMaintainerPRs: toUrls(digest.waitingOnMaintainerPRs),
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  recentlyClosedPRs: digest.recentlyClosedPRs,
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@oss-autopilot/core",
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- "version": "3.13.0",
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+ "version": "3.13.2",
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  "description": "CLI and core library for managing open source contributions",
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  "type": "module",
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  "bin": {
@@ -54,7 +54,7 @@
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  "dependencies": {
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  "@octokit/plugin-throttling": "^11.0.3",
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  "@octokit/rest": "^22.0.1",
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- "@oss-scout/core": "^0.11.0",
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+ "@oss-scout/core": "^1.1.0",
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  "commander": "^15.0.0",
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  "zod": "^4.4.3"
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  },
@@ -72,7 +72,7 @@
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  "bundle": "esbuild src/cli.ts --bundle --platform=node --target=node22 --format=cjs --minify --sourcemap --outfile=dist/cli.bundle.cjs",
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  "start": "tsx src/cli.ts",
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  "dev": "tsx watch src/cli.ts",
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- "typecheck": "tsc --noEmit",
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+ "typecheck": "tsc --noEmit && tsc --noEmit -p tsconfig.tests.json",
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  "test": "vitest run",
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  "test:coverage": "vitest run --coverage",
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  "test:watch": "vitest",