npm - @organon-methodology/tools - Versions diffs - 0.5.0 → 0.5.2 - Mend

@organon-methodology/tools 0.5.0 → 0.5.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (22) hide show

package/dist/core/init.test.js +40 -0
package/dist/core/init.test.js.map +1 -1
package/dist/core/validate-frontmatter.js +13 -3
package/dist/core/validate-frontmatter.js.map +1 -1
package/dist/core/validate-frontmatter.test.js +86 -0
package/dist/core/validate-frontmatter.test.js.map +1 -1
package/dist/core/verify-tier4-tests.d.ts.map +1 -1
package/dist/core/verify-tier4-tests.js +8 -2
package/dist/core/verify-tier4-tests.js.map +1 -1
package/dist/core/verify-tier4-tests.test.js +38 -0
package/dist/core/verify-tier4-tests.test.js.map +1 -1
package/dist/mcp/tools.js +9 -9
package/dist/mcp/tools.js.map +1 -1
package/dist/templates/config.d.ts +2 -2
package/dist/templates/config.js +2 -2
package/dist/templates/skills/domain-feature-design.js +2 -2
package/dist/templates/skills/domain-feature-design.js.map +1 -1
package/dist/templates/skills/organon-file-creation.js +1 -1
package/dist/templates/skills/quality-review.js +1 -1
package/dist/templates/skills/session-compounding.js +1 -1
package/dist/templates/skills/verify-and-health.js +1 -1
package/package.json +1 -1

package/dist/core/init.test.js CHANGED Viewed

@@ -6,6 +6,7 @@
  */
 import { describe, it, expect } from 'vitest';
 import { init } from './init.js';
+import { validateFrontmatter } from './validate-frontmatter.js';
 import { MemoryFileSystem } from './test-helpers.js';
 import { getSkillTemplates, METHODOLOGY_VERSION } from '../templates/index.js';
 describe('init', () => {
@@ -315,5 +316,44 @@ loads:
         expect(config.testGlobs).toContain('**/*.test.ts');
         expect(config.testIgnorePatterns).toBeDefined();
     });
+    it('init output passes frontmatter validation (no FRONTMATTER_NAME_DIR_MISMATCH)', async () => {
+        const fs = new MemoryFileSystem();
+        const initResult = await init({
+            projectRoot: '/project',
+            installSkills: false,
+            force: false,
+            fs,
+        });
+        expect(initResult.success).toBe(true);
+        // Write generated files to the MemoryFileSystem
+        for (const [relativePath, content] of initResult.files) {
+            fs.addFile(`/project/${relativePath}`, content);
+        }
+        // Build config from generated organon.config.json
+        const configContent = initResult.files.get('organon.config.json');
+        expect(configContent).toBeDefined();
+        const parsedConfig = JSON.parse(configContent);
+        const config = {
+            projectRoot: '/project',
+            organonPaths: parsedConfig.organonPaths ?? ['.'],
+            organonGlobs: parsedConfig.organonGlobs ?? ['**/ETHOS.md', '**/PHILOSOPHY.md', '**/README.md'],
+            ignorePatterns: parsedConfig.ignorePatterns ?? ['node_modules/**'],
+            workflowPaths: parsedConfig.workflowPaths ?? {},
+            freshnessThresholdHours: parsedConfig.freshnessThresholdHours ?? 24,
+        };
+        // Collect all generated .md files (excluding CLAUDE.md which has no frontmatter)
+        const mdFiles = [...initResult.files.keys()]
+            .filter((f) => f.endsWith('.md') && f !== 'CLAUDE.md');
+        const validateResult = await validateFrontmatter({
+            projectRoot: '/project',
+            config,
+            fs,
+            files: mdFiles,
+            stages: [1, 4],
+        });
+        expect(validateResult.success).toBe(true);
+        const mismatchWarnings = validateResult.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH');
+        expect(mismatchWarnings).toHaveLength(0);
+    });
 });
 //# sourceMappingURL=init.test.js.map

package/dist/core/init.test.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/core/validate-frontmatter.js CHANGED Viewed

@@ -439,14 +439,24 @@ function validateTruthfulness(fm, fullContent, body, file, errors, warnings) {
 // ---------------------------------------------------------------------------
 // Stage 4: Consistency
 // ---------------------------------------------------------------------------
+// Well-known Organon container/collection directories where name-directory
+// match is inappropriate (these hold files from multiple domains/topics).
+const COLLECTION_CONTAINER_DIRS = new Set([
+    'organon',
+    'book-llms',
+    'book-humans',
+    'observations',
+    'rfcs',
+    'protocols',
+]);
 function validateConsistency(fm, file, allFrontmatter, errors, warnings) {
     const dir = dirName(file);
     const dirParts = dir.replace(/\\/g, '/').split('/');
-    // Name should match parent directory
+    // Name should match parent directory (domain-boundary dirs only)
     if (fm.name && dirParts.length > 0) {
         const parentDir = dirParts[dirParts.length - 1];
-        // Only check for non-root files (skip top-level ETHOS.md etc.)
-        if (parentDir !== '.' && parentDir !== '' && baseName(file) !== 'README.md') {
+        // Only check for non-root files, non-READMEs, and non-collection containers
+        if (parentDir !== '.' && parentDir !== '' && baseName(file) !== 'README.md' && !COLLECTION_CONTAINER_DIRS.has(parentDir)) {
             if (fm.name !== parentDir && fm.name !== parentDir.toLowerCase()) {
                 warnings.push({
                     severity: 'warning',

package/dist/core/validate-frontmatter.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/core/validate-frontmatter.test.js CHANGED Viewed

@@ -354,6 +354,92 @@ token_estimate: 10000
             });
             expect(result.warnings).toContainEqual(expect.objectContaining({ code: 'FRONTMATTER_NAME_DIR_MISMATCH' }));
         });
+        it('does not warn for files in organon/ container directory', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/organon/ETHOS.md': makeEthos({ name: 'my-project', scope: 'product' }),
+            });
+            const config = makeConfig('/project');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['organon/ETHOS.md'],
+                stages: [4],
+            });
+            expect(result.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH')).toHaveLength(0);
+        });
+        it('does not warn for files in observations/ collection directory', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/organon/observations/001-testing.md': makeEthos({ name: 'testing', scope: 'methodology' }),
+            });
+            const config = makeConfig('/project');
+            config.organonGlobs.push('**/observations/*.md');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['organon/observations/001-testing.md'],
+                stages: [4],
+            });
+            expect(result.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH')).toHaveLength(0);
+        });
+        it('does not warn for files in rfcs/ collection directory', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/rfcs/001-testing.md': makeEthos({ name: 'testing', scope: 'methodology' }),
+            });
+            const config = makeConfig('/project');
+            config.organonGlobs.push('**/rfcs/*.md');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['rfcs/001-testing.md'],
+                stages: [4],
+            });
+            expect(result.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH')).toHaveLength(0);
+        });
+        it('does not warn for files in book-llms/ container directory', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/book-llms/ETHOS.md': makeEthos({ name: 'meta-organon', scope: 'meta' }),
+            });
+            const config = makeConfig('/project');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['book-llms/ETHOS.md'],
+                stages: [4],
+            });
+            expect(result.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH')).toHaveLength(0);
+        });
+        it('still warns for domain directory name mismatch', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/organon/domains/tools/ETHOS.md': makeEthos({ name: 'wrong-name', scope: 'domain' }),
+            });
+            const config = makeConfig('/project');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['organon/domains/tools/ETHOS.md'],
+                stages: [4],
+            });
+            expect(result.warnings).toContainEqual(expect.objectContaining({ code: 'FRONTMATTER_NAME_DIR_MISMATCH' }));
+        });
+        it('does not warn when domain directory name matches', async () => {
+            const fs = new MemoryFileSystem({
+                '/project/organon/domains/tools/ETHOS.md': makeEthos({ name: 'tools', scope: 'domain' }),
+            });
+            const config = makeConfig('/project');
+            const result = await validateFrontmatter({
+                projectRoot: '/project',
+                config,
+                fs,
+                files: ['organon/domains/tools/ETHOS.md'],
+                stages: [4],
+            });
+            expect(result.warnings.filter((w) => w.code === 'FRONTMATTER_NAME_DIR_MISMATCH')).toHaveLength(0);
+        });
         it('reports missing workflow for automated protocol', async () => {
             const fs = new MemoryFileSystem({
                 '/project/PROTOCOL.md': `---

package/dist/core/validate-frontmatter.test.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/core/verify-tier4-tests.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"verify-tier4-tests.d.ts","sourceRoot":"","sources":["../../src/core/verify-tier4-tests.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAGH,OAAO,KAAK,EACV,iBAAiB,EACjB,UAAU,EACV,aAAa,EACd,MAAM,YAAY,CAAC;AAMpB,MAAM,WAAW,gBAAgB;IAC/B,OAAO,EAAE,OAAO,CAAC;IACjB,mCAAmC;IACnC,YAAY,EAAE,MAAM,CAAC;IACrB,gDAAgD;IAChD,cAAc,EAAE,MAAM,CAAC;IACvB,iCAAiC;IACjC,UAAU,EAAE,MAAM,CAAC;IACnB,MAAM,EAAE,iBAAiB,EAAE,CAAC;IAC5B,QAAQ,EAAE,iBAAiB,EAAE,CAAC;CAC/B;~~AAuBD~~;;;GAGG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,EAAE;IAC9C,WAAW,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,aAAa,CAAC;IACtB,EAAE,EAAE,UAAU,CAAC;CAChB,GAAG,OAAO,CAAC,gBAAgB,CAAC,~~CA6E5B~~"}
1	+ {"version":3,"file":"verify-tier4-tests.d.ts","sourceRoot":"","sources":["../../src/core/verify-tier4-tests.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAGH,OAAO,KAAK,EACV,iBAAiB,EACjB,UAAU,EACV,aAAa,EACd,MAAM,YAAY,CAAC;AAMpB,MAAM,WAAW,gBAAgB;IAC/B,OAAO,EAAE,OAAO,CAAC;IACjB,mCAAmC;IACnC,YAAY,EAAE,MAAM,CAAC;IACrB,gDAAgD;IAChD,cAAc,EAAE,MAAM,CAAC;IACvB,iCAAiC;IACjC,UAAU,EAAE,MAAM,CAAC;IACnB,MAAM,EAAE,iBAAiB,EAAE,CAAC;IAC5B,QAAQ,EAAE,iBAAiB,EAAE,CAAC;CAC/B;AAyBD;;;GAGG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,EAAE;IAC9C,WAAW,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,aAAa,CAAC;IACtB,EAAE,EAAE,UAAU,CAAC;CAChB,GAAG,OAAO,CAAC,gBAAgB,CAAC,CAiF5B"}

package/dist/core/verify-tier4-tests.js CHANGED Viewed

@@ -21,9 +21,11 @@ const DEFAULT_TEST_GLOBS = [
     '**/*.test.jsx',
     '**/*.spec.ts',
     '**/*.spec.js',
+    '**/*Spec.scala',
+    '**/*Test.scala',
 ];
 const ANNOTATION_RE = /@organon-invariant\s+INV-[\w-]+/;
-const TESTING_IMPORT_RE = /from\s+['"]@organon-methodology\/testing/;
+const TESTING_IMPORT_RE = /from\s+['"]@organon-methodology\/testing|import\s+io\.github\.vledicfranco\.organon\.testing\./;
 const TEST_INVARIANT_RE = /testInvariant\s*\(/;
 // ---------------------------------------------------------------------------
 // Public API
@@ -60,12 +62,16 @@ export async function verifyTier4Tests(options) {
             let isValid = true;
             // Check for @organon-methodology/testing import
             if (!TESTING_IMPORT_RE.test(content)) {
+                const isScala = file.endsWith('.scala');
+                const suggestion = isScala
+                    ? `Add: import io.github.vledicfranco.organon.testing.adapters.OrganonSuite`
+                    : `Add: import { testInvariant } from '@organon-methodology/testing/vitest';`;
                 warnings.push({
                     severity: 'warning',
                     code: 'TIER4_MISSING_IMPORT',
                     message: `Test file has @organon-invariant annotation but does not import from @organon-methodology/testing`,
                     file,
-                    suggestion: `Add: import { testInvariant } from '@organon-methodology/testing/vitest';`,
+                    suggestion,
                 });
                 isValid = false;
             }

package/dist/core/verify-tier4-tests.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/core/verify-tier4-tests.test.js CHANGED Viewed

@@ -119,6 +119,44 @@ describe('verifyTier4Tests', () => {
         expect(result.validFiles).toBe(1);
         expect(result.warnings.length).toBeGreaterThan(0);
     });
+    it('passes when Scala file has organon testing import and testInvariant', async () => {
+        const fs = new MemoryFileSystem({
+            '/project/tests/MySpec.scala': [
+                `// @organon-invariant INV-FOO-1`,
+                `import io.github.vledicfranco.organon.testing.adapters.OrganonSuite`,
+                `testInvariant("INV-FOO-1", "test") {`,
+                `  Future.successful(assert(true))`,
+                `}`,
+            ].join('\n'),
+        });
+        const result = await verifyTier4Tests({
+            projectRoot: PROJECT_ROOT,
+            config: makeConfig({ testGlobs: ['**/*Spec.scala'] }),
+            fs,
+        });
+        expect(result.success).toBe(true);
+        expect(result.annotatedFiles).toBe(1);
+        expect(result.validFiles).toBe(1);
+        expect(result.warnings).toHaveLength(0);
+    });
+    it('warns Scala file with annotation but no organon import with Scala suggestion', async () => {
+        const fs = new MemoryFileSystem({
+            '/project/tests/MySpec.scala': [
+                `// @organon-invariant INV-FOO-1`,
+                `import munit.FunSuite`,
+                `testInvariant("INV-FOO-1", "test") {}`,
+            ].join('\n'),
+        });
+        const result = await verifyTier4Tests({
+            projectRoot: PROJECT_ROOT,
+            config: makeConfig({ testGlobs: ['**/*Spec.scala'] }),
+            fs,
+        });
+        expect(result.success).toBe(true);
+        const importWarning = result.warnings.find((w) => w.code === 'TIER4_MISSING_IMPORT');
+        expect(importWarning).toBeDefined();
+        expect(importWarning.suggestion).toContain('OrganonSuite');
+    });
     it('reports warning suggestions with correct import path', async () => {
         const fs = new MemoryFileSystem({
             '/project/tests/my.test.ts': [

package/dist/core/verify-tier4-tests.test.js.map CHANGED Viewed

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1	+ 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package/dist/mcp/tools.js CHANGED Viewed

@@ -13,7 +13,7 @@ import { verify } from '../core/verify.js';
 import { exportKnowledgeGraph } from '../core/export.js';
 export function registerTools(server, projectRoot, config, fs) {
     // 1. Validate frontmatter
-    server.tool('organon_validate_frontmatter', 'Validate organon YAML frontmatter (4-stage: schema, references, truthfulness, consistency)', {
+    server.tool('organon_validate_frontmatter', 'Validate YAML frontmatter in organon files across 4 stages: schema, references, truthfulness, consistency. Use after editing organon files, when frontmatter looks wrong, or to check metadata accuracy before committing.', {
         files: z.array(z.string()).optional().describe('Specific files to validate (all if omitted)'),
         stages: z.array(z.number().int().min(1).max(4)).optional().describe('Stages: 1=schema, 2=refs, 3=truth, 4=consistency'),
     }, async (args) => {
@@ -27,7 +27,7 @@ export function registerTools(server, projectRoot, config, fs) {
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 2. Generate frontmatter
-    server.tool('organon_generate_frontmatter', 'Auto-generate YAML frontmatter for an organon file by analyzing its content', {
+    server.tool('organon_generate_frontmatter', 'Generate YAML frontmatter for an organon file by analyzing its content. Use when creating new organon files, when a file is missing frontmatter, or to scaffold metadata for a new ETHOS.md, PHILOSOPHY.md, or PROTOCOL.md.', {
         file: z.string().describe('File path (project-relative)'),
         type: z.enum(['navigation', 'constraints', 'rationale', 'procedures', 'mapping']).optional(),
         scope: z.enum(['product', 'domain', 'feature', 'component', 'meta', 'methodology']).optional(),
@@ -49,7 +49,7 @@ export function registerTools(server, projectRoot, config, fs) {
         };
     });
     // 3. Query
-    server.tool('organon_query', 'Query organon files by metadata (scope, type, priority, task, budget, name, category)', {
+    server.tool('organon_query', 'Search and filter organon files by metadata. Use to find relevant files for a task, discover what constraints apply to a scope, check token budgets, or list files by epistemic category (constraint, assertion, rule). Supports filtering by scope, type, priority, name, and token budget.', {
         scope: z.enum(['product', 'domain', 'feature', 'component', 'meta', 'methodology']).optional(),
         type: z.enum(['navigation', 'constraints', 'rationale', 'procedures', 'mapping']).optional(),
         priority: z.enum(['high', 'medium', 'low']).optional(),
@@ -78,7 +78,7 @@ export function registerTools(server, projectRoot, config, fs) {
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 4. Health
-    server.tool('organon_health', 'Show organon health dashboard (coverage, validation, tokens, freshness, score)', {
+    server.tool('organon_health', 'Show project health score and diagnostics. Reports coverage gaps, validation issues, token budgets, file freshness, and an overall score out of 100. Use to check project status, diagnose organon problems, or verify nothing is degraded after changes.', {
         fixSuggestions: z.boolean().optional().describe('Include fix suggestions'),
     }, async (args) => {
         const result = await health({
@@ -90,7 +90,7 @@ export function registerTools(server, projectRoot, config, fs) {
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 5. Find
-    server.tool('organon_find', 'Cross-domain discovery — find organons by file path, scope, type, or name', {
+    server.tool('organon_find', 'Find which organon files govern a specific file, directory, or domain. Use when you need to know what constraints apply to code you are editing, or to discover organon files by scope, type, or name.', {
         file: z.string().optional().describe('Find organons governing this file'),
         scope: z.enum(['product', 'domain', 'feature', 'component', 'meta', 'methodology']).optional(),
         type: z.enum(['navigation', 'constraints', 'rationale', 'procedures', 'mapping']).optional(),
@@ -108,17 +108,17 @@ export function registerTools(server, projectRoot, config, fs) {
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 6. Verify triplets
-    server.tool('organon_verify_triplets', 'Verify protocol-workflow-tool binding integrity (3-layer architecture)', {}, async () => {
+    server.tool('organon_verify_triplets', 'Check that protocol-workflow-tool bindings are consistent and bidirectional. Use to detect orphaned workflows, missing tool references, or broken links between the three architecture layers.', {}, async () => {
         const result = await verifyTriplets({ projectRoot, config, fs });
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 7. Suggest tools
-    server.tool('organon_suggest_tools', 'Analyze protocols and suggest automation tier upgrades', {}, async () => {
+    server.tool('organon_suggest_tools', 'Suggest which manual protocols could be automated. Analyzes protocol complexity and frequency to recommend automation tier upgrades. Use during planning or session compounding to find automation opportunities.', {}, async () => {
         const result = await suggestTools({ projectRoot, config, fs });
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 8. Export knowledge graph
-    server.tool('organon_export', 'Export organon knowledge graph as structured JSON (entities, assertions, relationships, rules)', {
+    server.tool('organon_export', 'Export the full organon knowledge graph as structured JSON with entities, assertions, relationships, and rules. Use for knowledge interoperability, external tool consumption, or analysis of the project organon structure.', {
         version: z.string().optional().describe('Version to include in export metadata'),
     }, async (args) => {
         const result = await exportKnowledgeGraph({
@@ -130,7 +130,7 @@ export function registerTools(server, projectRoot, config, fs) {
         return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
     });
     // 9. Verify (orchestrator)
-    server.tool('organon_verify', 'Run verification gates (frontmatter, triplets, freshness — or custom subset)', {
+    server.tool('organon_verify', 'Run all 9 verification gates or a specific subset. Checks frontmatter, triplets, references, placeholder detection, freshness, invariant coverage, workflow quality, tier-4 tests, and version alignment. Use before committing, at session start, or to diagnose what is broken.', {
         gates: z.array(z.string()).optional().describe('Specific gates to run (all if omitted)'),
     }, async (args) => {
         const result = await verify({

package/dist/mcp/tools.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ 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package/dist/templates/config.d.ts CHANGED Viewed

@@ -1,6 +1,6 @@
 /**
  * organon.config.json template for organon init.
  */
-export declare const CONFIG_TEMPLATE = "{\n  \"methodology_version\": \"0.5.0\",\n  \"organonPaths\": [\"organon\", \".\"],\n  \"organonGlobs\": [\n    \"**/ETHOS.md\",\n    \"**/PHILOSOPHY.md\",\n    \"**/PROTOCOL.md\",\n    \"**/PROTOCOLS.md\",\n    \"**/README.md\",\n    \"**/PRIMER.md\",\n    \"**/methodology-reference.md\",\n    \"**/components.md\",\n    \"**/observations/*.md\",\n    \"**/rfcs/*.md\"\n  ],\n  \"ignorePatterns\": [\n    \"**/node_modules/**\",\n    \"**/dist/**\",\n    \"**/.git/**\",\n    \"**/coverage/**\"\n  ],\n  \"workflowPaths\": {\n    \"claudeCode\": \".claude/skills\",\n    \"cursor\": \".cursor/rules\",\n    \"generic\": \"organon/workflows\"\n  },\n  \"freshnessThresholdHours\": 720,\n  \"testGlobs\": [\n    \"**/*.test.ts\",\n    \"**/*.test.js\",\n    \"**/*.spec.ts\",\n    \"**/*.spec.js\"\n  ],\n  \"testIgnorePatterns\": [\n    \"**/node_modules/**\",\n    \"**/dist/**\"\n  ]\n}\n";
-export declare const METHODOLOGY_VERSION = "0.5.0";
+export declare const CONFIG_TEMPLATE = "{\n  \"methodology_version\": \"0.5.2\",\n  \"organonPaths\": [\"organon\", \".\"],\n  \"organonGlobs\": [\n    \"**/ETHOS.md\",\n    \"**/PHILOSOPHY.md\",\n    \"**/PROTOCOL.md\",\n    \"**/PROTOCOLS.md\",\n    \"**/README.md\",\n    \"**/PRIMER.md\",\n    \"**/methodology-reference.md\",\n    \"**/components.md\",\n    \"**/observations/*.md\",\n    \"**/rfcs/*.md\"\n  ],\n  \"ignorePatterns\": [\n    \"**/node_modules/**\",\n    \"**/dist/**\",\n    \"**/.git/**\",\n    \"**/coverage/**\"\n  ],\n  \"workflowPaths\": {\n    \"claudeCode\": \".claude/skills\",\n    \"cursor\": \".cursor/rules\",\n    \"generic\": \"organon/workflows\"\n  },\n  \"freshnessThresholdHours\": 720,\n  \"testGlobs\": [\n    \"**/*.test.ts\",\n    \"**/*.test.js\",\n    \"**/*.spec.ts\",\n    \"**/*.spec.js\"\n  ],\n  \"testIgnorePatterns\": [\n    \"**/node_modules/**\",\n    \"**/dist/**\"\n  ]\n}\n";
+export declare const METHODOLOGY_VERSION = "0.5.2";
 //# sourceMappingURL=config.d.ts.map

package/dist/templates/config.js CHANGED Viewed

@@ -2,7 +2,7 @@
  * organon.config.json template for organon init.
  */
 export const CONFIG_TEMPLATE = `{
-  "methodology_version": "0.5.0",
+  "methodology_version": "0.5.2",
   "organonPaths": ["organon", "."],
   "organonGlobs": [
     "**/ETHOS.md",
@@ -40,5 +40,5 @@ export const CONFIG_TEMPLATE = `{
   ]
 }
 `;
-export const METHODOLOGY_VERSION = '0.5.0';
+export const METHODOLOGY_VERSION = '0.5.2';
 //# sourceMappingURL=config.js.map

package/dist/templates/skills/domain-feature-design.js CHANGED Viewed

@@ -8,14 +8,14 @@
 export const DOMAIN_FEATURE_DESIGN_SKILL = [
     '---',
     'name: domain-feature-design',
-    'description: Guides agents through proper domain/feature design following Organon methodology. Ensures RFCs contain both organon mutation plan (ETHOS.md, PHILOSOPHY.md content) AND technical implementation plan (architecture, API, phases). Prevents common mistake of writing only technical plan or only organon plan.',
+    'description: Guides agents through proper domain/feature design following Organon methodology. Ensures RFCs contain both organon mutation plan (ETHOS.md, PHILOSOPHY.md content) AND technical implementation plan (architecture, API, phases). Use when designing new domains, features, or significant capabilities that require organon evolution.',
     'protocol_id: PROTO-ORG-1',
     'protocol_file: organon/protocols/PROTOCOLS.md',
     'tools: [organon-validate, organon-verify]',
     'loads:',
     '  - organon/ETHOS.md',
     '  - CLAUDE.md',
-    'methodology_version: "0.5.0"',
+    'methodology_version: "0.5.2"',
     '---',
     '',
     '# Domain/Feature Design Skill',

package/dist/templates/skills/domain-feature-design.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/templates/skills/organon-file-creation.js CHANGED Viewed

@@ -15,7 +15,7 @@ export const ORGANON_FILE_CREATION_SKILL = [
     'loads:',
     '  - organon/ETHOS.md',
     '  - CLAUDE.md',
-    'methodology_version: "0.5.0"',
+    'methodology_version: "0.5.2"',
     '---',
     '',
     '# Organon File Creation Workflow',

package/dist/templates/skills/quality-review.js CHANGED Viewed

@@ -15,7 +15,7 @@ export const QUALITY_REVIEW_SKILL = [
     'loads:',
     '  - organon/ETHOS.md',
     '  - CLAUDE.md',
-    'methodology_version: "0.5.0"',
+    'methodology_version: "0.5.2"',
     '---',
     '',
     '# Quality Review Workflow',

package/dist/templates/skills/session-compounding.js CHANGED Viewed

@@ -15,7 +15,7 @@ export const SESSION_COMPOUNDING_SKILL = [
     'loads:',
     '  - CLAUDE.md',
     '  - organon/observations/README.md',
-    'methodology_version: "0.5.0"',
+    'methodology_version: "0.5.2"',
     '---',
     '',
     '# Session Compounding Workflow',

package/dist/templates/skills/verify-and-health.js CHANGED Viewed

@@ -14,7 +14,7 @@ export const VERIFY_AND_HEALTH_SKILL = [
     'tools: [organon-verify, organon-health]',
     'loads:',
     '  - CLAUDE.md',
-    'methodology_version: "0.5.0"',
+    'methodology_version: "0.5.2"',
     '---',
     '',
     '# Verify and Health Workflow',

package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@organon-methodology/tools",
-  "version": "0.5.0",
+  "version": "0.5.2",
   "description": "CLI tools and MCP server for the Organon Methodology - auto-generation, verification, and discovery",
   "type": "module",
   "main": "dist/index.js",