@orcabus/platform-cdk-constructs 1.2.0 → 1.2.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.jsii +2 -2
- package/api-gateway/api-gateway.js +1 -1
- package/deployment-stack-pipeline/artifact-bucket.js +1 -1
- package/deployment-stack-pipeline/pipeline.js +1 -1
- package/dynamodb/index.js +2 -2
- package/ecs/index.js +1 -1
- package/eventbridge-rules/sfn-slack-notification.js +1 -1
- package/lambda/index.js +1 -1
- package/lambda/layers/icav2_tools/poetry.lock +98 -97
- package/lambda/layers/icav2_tools/pyproject.toml +1 -1
- package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/fastq_decompression/models.py +2 -1
- package/monitored-queue/index.js +1 -1
- package/named-lambda-role/index.js +1 -1
- package/package.json +1 -1
- package/provider-function/index.js +1 -1
- package/shared-config/networking.js +2 -2
- package/shared-config/slack.js +1 -1
package/.jsii
CHANGED
|
@@ -12020,6 +12020,6 @@
|
|
|
12020
12020
|
"symbolId": "shared-config/slack:SlackAlerts"
|
|
12021
12021
|
}
|
|
12022
12022
|
},
|
|
12023
|
-
"version": "1.2.
|
|
12024
|
-
"fingerprint": "
|
|
12023
|
+
"version": "1.2.2",
|
|
12024
|
+
"fingerprint": "XqpkndJjAEa3Wx3z4xuhlQB7IPw2pZm1iAoaPakjl3s="
|
|
12025
12025
|
}
|
|
@@ -15,7 +15,7 @@ const aws_lambda_1 = require("aws-cdk-lib/aws-lambda");
|
|
|
15
15
|
const aws_route53_targets_1 = require("aws-cdk-lib/aws-route53-targets");
|
|
16
16
|
const config_1 = require("./config");
|
|
17
17
|
class OrcaBusApiGateway extends constructs_1.Construct {
|
|
18
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "1.2.
|
|
18
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "1.2.2" };
|
|
19
19
|
/**
|
|
20
20
|
* The AWS region where the API Gateway is deployed.
|
|
21
21
|
*/
|
|
@@ -13,7 +13,7 @@ exports.CROSS_DEPLOYMENT_ARTIFACT_BUCKET_NAME = "orcabus-cross-deployment-codepi
|
|
|
13
13
|
exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ALIAS = "orcabus-cross-deployment-codepipeline-artifact";
|
|
14
14
|
exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ARN_SSM_PARAMETER_NAME = "/orcabus/deployment-stack-pipeline/artifact-bucket/kms-key-arn";
|
|
15
15
|
class CrossDeploymentArtifactBucket extends constructs_1.Construct {
|
|
16
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "1.2.
|
|
16
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "1.2.2" };
|
|
17
17
|
/**
|
|
18
18
|
* The S3 bucket used to store artifacts for cross-deployment pipelines.
|
|
19
19
|
*/
|
|
@@ -45,7 +45,7 @@ exports.DEFAULT_INSTALL_COMMANDS = [
|
|
|
45
45
|
* before using this construct.
|
|
46
46
|
*/
|
|
47
47
|
class DeploymentStackPipeline extends constructs_1.Construct {
|
|
48
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "1.2.
|
|
48
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "1.2.2" };
|
|
49
49
|
/**
|
|
50
50
|
* The code pipeline construct that is created.
|
|
51
51
|
*/
|
package/dynamodb/index.js
CHANGED
|
@@ -40,7 +40,7 @@ const dynamodb = __importStar(require("aws-cdk-lib/aws-dynamodb"));
|
|
|
40
40
|
const aws_cdk_lib_1 = require("aws-cdk-lib");
|
|
41
41
|
const config_1 = require("./config");
|
|
42
42
|
class DynamoDbPartitionedConstruct extends constructs_1.Construct {
|
|
43
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "1.2.
|
|
43
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "1.2.2" };
|
|
44
44
|
table;
|
|
45
45
|
constructor(scope, id, props) {
|
|
46
46
|
super(scope, id);
|
|
@@ -75,7 +75,7 @@ class DynamoDbPartitionedConstruct extends constructs_1.Construct {
|
|
|
75
75
|
}
|
|
76
76
|
exports.DynamoDbPartitionedConstruct = DynamoDbPartitionedConstruct;
|
|
77
77
|
class DynamoDbNonPartitionedConstruct extends constructs_1.Construct {
|
|
78
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "1.2.
|
|
78
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "1.2.2" };
|
|
79
79
|
table;
|
|
80
80
|
constructor(scope, id, props) {
|
|
81
81
|
super(scope, id);
|
package/ecs/index.js
CHANGED
|
@@ -55,7 +55,7 @@ exports.LAMBDA_ARCHITECTURE_MAP = {
|
|
|
55
55
|
['ARM64']: lambda.Architecture.ARM_64
|
|
56
56
|
};
|
|
57
57
|
class EcsFargateTaskConstruct extends constructs_1.Construct {
|
|
58
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "1.2.
|
|
58
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "1.2.2" };
|
|
59
59
|
cluster;
|
|
60
60
|
taskDefinition;
|
|
61
61
|
taskExecutionRole;
|
|
@@ -17,7 +17,7 @@ var SfnEventStatus;
|
|
|
17
17
|
SfnEventStatus["ABORTED"] = "ABORTED";
|
|
18
18
|
})(SfnEventStatus || (exports.SfnEventStatus = SfnEventStatus = {}));
|
|
19
19
|
class SfnSlackNotification extends constructs_1.Construct {
|
|
20
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "1.2.
|
|
20
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "1.2.2" };
|
|
21
21
|
rule;
|
|
22
22
|
constructor(scope, id, props) {
|
|
23
23
|
super(scope, id);
|
package/lambda/index.js
CHANGED
|
@@ -57,7 +57,7 @@ function getPythonUvDockerImage() {
|
|
|
57
57
|
return aws_cdk_lib_1.DockerImage.fromBuild(path_1.default.join(__dirname, 'build_python'));
|
|
58
58
|
}
|
|
59
59
|
class PythonUvFunction extends aws_lambda_python_alpha_1.PythonFunction {
|
|
60
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "1.2.
|
|
60
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "1.2.2" };
|
|
61
61
|
// Class constructs, to be used for caching the layers
|
|
62
62
|
// This means that if there are multiple lambdas throughout the stack
|
|
63
63
|
// They will all use the same layer
|
|
@@ -77,17 +77,17 @@ chardet = ">=3.0.2"
|
|
|
77
77
|
|
|
78
78
|
[[package]]
|
|
79
79
|
name = "boto3"
|
|
80
|
-
version = "1.42.
|
|
80
|
+
version = "1.42.46"
|
|
81
81
|
description = "The AWS SDK for Python"
|
|
82
82
|
optional = false
|
|
83
83
|
python-versions = ">=3.9"
|
|
84
84
|
files = [
|
|
85
|
-
{file = "boto3-1.42.
|
|
86
|
-
{file = "boto3-1.42.
|
|
85
|
+
{file = "boto3-1.42.46-py3-none-any.whl", hash = "sha256:679cf4930e559621653bbd1439cf6e93b138cbaf46e36e5d7d95319999b7a356"},
|
|
86
|
+
{file = "boto3-1.42.46.tar.gz", hash = "sha256:c8c82ab34dd8d2d4d93a562d0e75fca164efa644651d3ccddb0f4aa88a481b38"},
|
|
87
87
|
]
|
|
88
88
|
|
|
89
89
|
[package.dependencies]
|
|
90
|
-
botocore = ">=1.42.
|
|
90
|
+
botocore = ">=1.42.46,<1.43.0"
|
|
91
91
|
jmespath = ">=0.7.1,<2.0.0"
|
|
92
92
|
s3transfer = ">=0.16.0,<0.17.0"
|
|
93
93
|
|
|
@@ -96,13 +96,13 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
|
|
|
96
96
|
|
|
97
97
|
[[package]]
|
|
98
98
|
name = "botocore"
|
|
99
|
-
version = "1.42.
|
|
99
|
+
version = "1.42.46"
|
|
100
100
|
description = "Low-level, data-driven core of boto 3."
|
|
101
101
|
optional = false
|
|
102
102
|
python-versions = ">=3.9"
|
|
103
103
|
files = [
|
|
104
|
-
{file = "botocore-1.42.
|
|
105
|
-
{file = "botocore-1.42.
|
|
104
|
+
{file = "botocore-1.42.46-py3-none-any.whl", hash = "sha256:f7459fcf586f38a3b0a242a172d3332141c770a3f5767bbb21e79d810db95d75"},
|
|
105
|
+
{file = "botocore-1.42.46.tar.gz", hash = "sha256:fc290b33aba6e271f627c4f46b8bcebfa1a94e19157d396732da417404158c01"},
|
|
106
106
|
]
|
|
107
107
|
|
|
108
108
|
[package.dependencies]
|
|
@@ -332,23 +332,24 @@ testing = ["pytest (<9)", "pytest-mock"]
|
|
|
332
332
|
|
|
333
333
|
[[package]]
|
|
334
334
|
name = "fastapi"
|
|
335
|
-
version = "0.128.
|
|
335
|
+
version = "0.128.7"
|
|
336
336
|
description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production"
|
|
337
337
|
optional = false
|
|
338
338
|
python-versions = ">=3.9"
|
|
339
339
|
files = [
|
|
340
|
-
{file = "fastapi-0.128.
|
|
341
|
-
{file = "fastapi-0.128.
|
|
340
|
+
{file = "fastapi-0.128.7-py3-none-any.whl", hash = "sha256:6bd9bd31cb7047465f2d3fa3ba3f33b0870b17d4eaf7cdb36d1576ab060ad662"},
|
|
341
|
+
{file = "fastapi-0.128.7.tar.gz", hash = "sha256:783c273416995486c155ad2c0e2b45905dedfaf20b9ef8d9f6a9124670639a24"},
|
|
342
342
|
]
|
|
343
343
|
|
|
344
344
|
[package.dependencies]
|
|
345
345
|
annotated-doc = ">=0.0.2"
|
|
346
346
|
pydantic = ">=2.7.0"
|
|
347
|
-
starlette = ">=0.40.0,<0.
|
|
347
|
+
starlette = ">=0.40.0,<1.0.0"
|
|
348
348
|
typing-extensions = ">=4.8.0"
|
|
349
|
+
typing-inspection = ">=0.4.2"
|
|
349
350
|
|
|
350
351
|
[package.extras]
|
|
351
|
-
all = ["email-validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.8)", "httpx (>=0.23.0,<1.0.0)", "itsdangerous (>=1.1.0)", "jinja2 (>=3.1.5)", "orjson (>=3.
|
|
352
|
+
all = ["email-validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.8)", "httpx (>=0.23.0,<1.0.0)", "itsdangerous (>=1.1.0)", "jinja2 (>=3.1.5)", "orjson (>=3.9.3)", "pydantic-extra-types (>=2.0.0)", "pydantic-settings (>=2.0.0)", "python-multipart (>=0.0.18)", "pyyaml (>=5.3.1)", "ujson (>=5.8.0)", "uvicorn[standard] (>=0.12.0)"]
|
|
352
353
|
standard = ["email-validator (>=2.0.0)", "fastapi-cli[standard] (>=0.0.8)", "httpx (>=0.23.0,<1.0.0)", "jinja2 (>=3.1.5)", "pydantic-extra-types (>=2.0.0)", "pydantic-settings (>=2.0.0)", "python-multipart (>=0.0.18)", "uvicorn[standard] (>=0.12.0)"]
|
|
353
354
|
standard-no-fastapi-cloud-cli = ["email-validator (>=2.0.0)", "fastapi-cli[standard-no-fastapi-cloud-cli] (>=0.0.8)", "httpx (>=0.23.0,<1.0.0)", "jinja2 (>=3.1.5)", "pydantic-extra-types (>=2.0.0)", "pydantic-settings (>=2.0.0)", "python-multipart (>=0.0.18)", "uvicorn[standard] (>=0.12.0)"]
|
|
354
355
|
|
|
@@ -526,83 +527,83 @@ files = [
|
|
|
526
527
|
|
|
527
528
|
[[package]]
|
|
528
529
|
name = "numpy"
|
|
529
|
-
version = "2.4.
|
|
530
|
+
version = "2.4.2"
|
|
530
531
|
description = "Fundamental package for array computing in Python"
|
|
531
532
|
optional = false
|
|
532
533
|
python-versions = ">=3.11"
|
|
533
534
|
files = [
|
|
534
|
-
{file = "numpy-2.4.
|
|
535
|
-
{file = "numpy-2.4.
|
|
536
|
-
{file = "numpy-2.4.
|
|
537
|
-
{file = "numpy-2.4.
|
|
538
|
-
{file = "numpy-2.4.
|
|
539
|
-
{file = "numpy-2.4.
|
|
540
|
-
{file = "numpy-2.4.
|
|
541
|
-
{file = "numpy-2.4.
|
|
542
|
-
{file = "numpy-2.4.
|
|
543
|
-
{file = "numpy-2.4.
|
|
544
|
-
{file = "numpy-2.4.
|
|
545
|
-
{file = "numpy-2.4.
|
|
546
|
-
{file = "numpy-2.4.
|
|
547
|
-
{file = "numpy-2.4.
|
|
548
|
-
{file = "numpy-2.4.
|
|
549
|
-
{file = "numpy-2.4.
|
|
550
|
-
{file = "numpy-2.4.
|
|
551
|
-
{file = "numpy-2.4.
|
|
552
|
-
{file = "numpy-2.4.
|
|
553
|
-
{file = "numpy-2.4.
|
|
554
|
-
{file = "numpy-2.4.
|
|
555
|
-
{file = "numpy-2.4.
|
|
556
|
-
{file = "numpy-2.4.
|
|
557
|
-
{file = "numpy-2.4.
|
|
558
|
-
{file = "numpy-2.4.
|
|
559
|
-
{file = "numpy-2.4.
|
|
560
|
-
{file = "numpy-2.4.
|
|
561
|
-
{file = "numpy-2.4.
|
|
562
|
-
{file = "numpy-2.4.
|
|
563
|
-
{file = "numpy-2.4.
|
|
564
|
-
{file = "numpy-2.4.
|
|
565
|
-
{file = "numpy-2.4.
|
|
566
|
-
{file = "numpy-2.4.
|
|
567
|
-
{file = "numpy-2.4.
|
|
568
|
-
{file = "numpy-2.4.
|
|
569
|
-
{file = "numpy-2.4.
|
|
570
|
-
{file = "numpy-2.4.
|
|
571
|
-
{file = "numpy-2.4.
|
|
572
|
-
{file = "numpy-2.4.
|
|
573
|
-
{file = "numpy-2.4.
|
|
574
|
-
{file = "numpy-2.4.
|
|
575
|
-
{file = "numpy-2.4.
|
|
576
|
-
{file = "numpy-2.4.
|
|
577
|
-
{file = "numpy-2.4.
|
|
578
|
-
{file = "numpy-2.4.
|
|
579
|
-
{file = "numpy-2.4.
|
|
580
|
-
{file = "numpy-2.4.
|
|
581
|
-
{file = "numpy-2.4.
|
|
582
|
-
{file = "numpy-2.4.
|
|
583
|
-
{file = "numpy-2.4.
|
|
584
|
-
{file = "numpy-2.4.
|
|
585
|
-
{file = "numpy-2.4.
|
|
586
|
-
{file = "numpy-2.4.
|
|
587
|
-
{file = "numpy-2.4.
|
|
588
|
-
{file = "numpy-2.4.
|
|
589
|
-
{file = "numpy-2.4.
|
|
590
|
-
{file = "numpy-2.4.
|
|
591
|
-
{file = "numpy-2.4.
|
|
592
|
-
{file = "numpy-2.4.
|
|
593
|
-
{file = "numpy-2.4.
|
|
594
|
-
{file = "numpy-2.4.
|
|
595
|
-
{file = "numpy-2.4.
|
|
596
|
-
{file = "numpy-2.4.
|
|
597
|
-
{file = "numpy-2.4.
|
|
598
|
-
{file = "numpy-2.4.
|
|
599
|
-
{file = "numpy-2.4.
|
|
600
|
-
{file = "numpy-2.4.
|
|
601
|
-
{file = "numpy-2.4.
|
|
602
|
-
{file = "numpy-2.4.
|
|
603
|
-
{file = "numpy-2.4.
|
|
604
|
-
{file = "numpy-2.4.
|
|
605
|
-
{file = "numpy-2.4.
|
|
535
|
+
{file = "numpy-2.4.2-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:e7e88598032542bd49af7c4747541422884219056c268823ef6e5e89851c8825"},
|
|
536
|
+
{file = "numpy-2.4.2-cp311-cp311-macosx_11_0_arm64.whl", hash = "sha256:7edc794af8b36ca37ef5fcb5e0d128c7e0595c7b96a2318d1badb6fcd8ee86b1"},
|
|
537
|
+
{file = "numpy-2.4.2-cp311-cp311-macosx_14_0_arm64.whl", hash = "sha256:6e9f61981ace1360e42737e2bae58b27bf28a1b27e781721047d84bd754d32e7"},
|
|
538
|
+
{file = "numpy-2.4.2-cp311-cp311-macosx_14_0_x86_64.whl", hash = "sha256:cb7bbb88aa74908950d979eeaa24dbdf1a865e3c7e45ff0121d8f70387b55f73"},
|
|
539
|
+
{file = "numpy-2.4.2-cp311-cp311-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:4f069069931240b3fc703f1e23df63443dbd6390614c8c44a87d96cd0ec81eb1"},
|
|
540
|
+
{file = "numpy-2.4.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:c02ef4401a506fb60b411467ad501e1429a3487abca4664871d9ae0b46c8ba32"},
|
|
541
|
+
{file = "numpy-2.4.2-cp311-cp311-musllinux_1_2_aarch64.whl", hash = "sha256:2653de5c24910e49c2b106499803124dde62a5a1fe0eedeaecf4309a5f639390"},
|
|
542
|
+
{file = "numpy-2.4.2-cp311-cp311-musllinux_1_2_x86_64.whl", hash = "sha256:1ae241bbfc6ae276f94a170b14785e561cb5e7f626b6688cf076af4110887413"},
|
|
543
|
+
{file = "numpy-2.4.2-cp311-cp311-win32.whl", hash = "sha256:df1b10187212b198dd45fa943d8985a3c8cf854aed4923796e0e019e113a1bda"},
|
|
544
|
+
{file = "numpy-2.4.2-cp311-cp311-win_amd64.whl", hash = "sha256:b9c618d56a29c9cb1c4da979e9899be7578d2e0b3c24d52079c166324c9e8695"},
|
|
545
|
+
{file = "numpy-2.4.2-cp311-cp311-win_arm64.whl", hash = "sha256:47c5a6ed21d9452b10227e5e8a0e1c22979811cad7dcc19d8e3e2fb8fa03f1a3"},
|
|
546
|
+
{file = "numpy-2.4.2-cp312-cp312-macosx_10_13_x86_64.whl", hash = "sha256:21982668592194c609de53ba4933a7471880ccbaadcc52352694a59ecc860b3a"},
|
|
547
|
+
{file = "numpy-2.4.2-cp312-cp312-macosx_11_0_arm64.whl", hash = "sha256:40397bda92382fcec844066efb11f13e1c9a3e2a8e8f318fb72ed8b6db9f60f1"},
|
|
548
|
+
{file = "numpy-2.4.2-cp312-cp312-macosx_14_0_arm64.whl", hash = "sha256:b3a24467af63c67829bfaa61eecf18d5432d4f11992688537be59ecd6ad32f5e"},
|
|
549
|
+
{file = "numpy-2.4.2-cp312-cp312-macosx_14_0_x86_64.whl", hash = "sha256:805cc8de9fd6e7a22da5aed858e0ab16be5a4db6c873dde1d7451c541553aa27"},
|
|
550
|
+
{file = "numpy-2.4.2-cp312-cp312-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:6d82351358ffbcdcd7b686b90742a9b86632d6c1c051016484fa0b326a0a1548"},
|
|
551
|
+
{file = "numpy-2.4.2-cp312-cp312-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:9e35d3e0144137d9fdae62912e869136164534d64a169f86438bc9561b6ad49f"},
|
|
552
|
+
{file = "numpy-2.4.2-cp312-cp312-musllinux_1_2_aarch64.whl", hash = "sha256:adb6ed2ad29b9e15321d167d152ee909ec73395901b70936f029c3bc6d7f4460"},
|
|
553
|
+
{file = "numpy-2.4.2-cp312-cp312-musllinux_1_2_x86_64.whl", hash = "sha256:8906e71fd8afcb76580404e2a950caef2685df3d2a57fe82a86ac8d33cc007ba"},
|
|
554
|
+
{file = "numpy-2.4.2-cp312-cp312-win32.whl", hash = "sha256:ec055f6dae239a6299cace477b479cca2fc125c5675482daf1dd886933a1076f"},
|
|
555
|
+
{file = "numpy-2.4.2-cp312-cp312-win_amd64.whl", hash = "sha256:209fae046e62d0ce6435fcfe3b1a10537e858249b3d9b05829e2a05218296a85"},
|
|
556
|
+
{file = "numpy-2.4.2-cp312-cp312-win_arm64.whl", hash = "sha256:fbde1b0c6e81d56f5dccd95dd4a711d9b95df1ae4009a60887e56b27e8d903fa"},
|
|
557
|
+
{file = "numpy-2.4.2-cp313-cp313-macosx_10_13_x86_64.whl", hash = "sha256:25f2059807faea4b077a2b6837391b5d830864b3543627f381821c646f31a63c"},
|
|
558
|
+
{file = "numpy-2.4.2-cp313-cp313-macosx_11_0_arm64.whl", hash = "sha256:bd3a7a9f5847d2fb8c2c6d1c862fa109c31a9abeca1a3c2bd5a64572955b2979"},
|
|
559
|
+
{file = "numpy-2.4.2-cp313-cp313-macosx_14_0_arm64.whl", hash = "sha256:8e4549f8a3c6d13d55041925e912bfd834285ef1dd64d6bc7d542583355e2e98"},
|
|
560
|
+
{file = "numpy-2.4.2-cp313-cp313-macosx_14_0_x86_64.whl", hash = "sha256:aea4f66ff44dfddf8c2cffd66ba6538c5ec67d389285292fe428cb2c738c8aef"},
|
|
561
|
+
{file = "numpy-2.4.2-cp313-cp313-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:c3cd545784805de05aafe1dde61752ea49a359ccba9760c1e5d1c88a93bbf2b7"},
|
|
562
|
+
{file = "numpy-2.4.2-cp313-cp313-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:d0d9b7c93578baafcbc5f0b83eaf17b79d345c6f36917ba0c67f45226911d499"},
|
|
563
|
+
{file = "numpy-2.4.2-cp313-cp313-musllinux_1_2_aarch64.whl", hash = "sha256:f74f0f7779cc7ae07d1810aab8ac6b1464c3eafb9e283a40da7309d5e6e48fbb"},
|
|
564
|
+
{file = "numpy-2.4.2-cp313-cp313-musllinux_1_2_x86_64.whl", hash = "sha256:c7ac672d699bf36275c035e16b65539931347d68b70667d28984c9fb34e07fa7"},
|
|
565
|
+
{file = "numpy-2.4.2-cp313-cp313-win32.whl", hash = "sha256:8e9afaeb0beff068b4d9cd20d322ba0ee1cecfb0b08db145e4ab4dd44a6b5110"},
|
|
566
|
+
{file = "numpy-2.4.2-cp313-cp313-win_amd64.whl", hash = "sha256:7df2de1e4fba69a51c06c28f5a3de36731eb9639feb8e1cf7e4a7b0daf4cf622"},
|
|
567
|
+
{file = "numpy-2.4.2-cp313-cp313-win_arm64.whl", hash = "sha256:0fece1d1f0a89c16b03442eae5c56dc0be0c7883b5d388e0c03f53019a4bfd71"},
|
|
568
|
+
{file = "numpy-2.4.2-cp313-cp313t-macosx_11_0_arm64.whl", hash = "sha256:5633c0da313330fd20c484c78cdd3f9b175b55e1a766c4a174230c6b70ad8262"},
|
|
569
|
+
{file = "numpy-2.4.2-cp313-cp313t-macosx_14_0_arm64.whl", hash = "sha256:d9f64d786b3b1dd742c946c42d15b07497ed14af1a1f3ce840cce27daa0ce913"},
|
|
570
|
+
{file = "numpy-2.4.2-cp313-cp313t-macosx_14_0_x86_64.whl", hash = "sha256:b21041e8cb6a1eb5312dd1d2f80a94d91efffb7a06b70597d44f1bd2dfc315ab"},
|
|
571
|
+
{file = "numpy-2.4.2-cp313-cp313t-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:00ab83c56211a1d7c07c25e3217ea6695e50a3e2f255053686b081dc0b091a82"},
|
|
572
|
+
{file = "numpy-2.4.2-cp313-cp313t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:2fb882da679409066b4603579619341c6d6898fc83a8995199d5249f986e8e8f"},
|
|
573
|
+
{file = "numpy-2.4.2-cp313-cp313t-musllinux_1_2_aarch64.whl", hash = "sha256:66cb9422236317f9d44b67b4d18f44efe6e9c7f8794ac0462978513359461554"},
|
|
574
|
+
{file = "numpy-2.4.2-cp313-cp313t-musllinux_1_2_x86_64.whl", hash = "sha256:0f01dcf33e73d80bd8dc0f20a71303abbafa26a19e23f6b68d1aa9990af90257"},
|
|
575
|
+
{file = "numpy-2.4.2-cp313-cp313t-win32.whl", hash = "sha256:52b913ec40ff7ae845687b0b34d8d93b60cb66dcee06996dd5c99f2fc9328657"},
|
|
576
|
+
{file = "numpy-2.4.2-cp313-cp313t-win_amd64.whl", hash = "sha256:5eea80d908b2c1f91486eb95b3fb6fab187e569ec9752ab7d9333d2e66bf2d6b"},
|
|
577
|
+
{file = "numpy-2.4.2-cp313-cp313t-win_arm64.whl", hash = "sha256:fd49860271d52127d61197bb50b64f58454e9f578cb4b2c001a6de8b1f50b0b1"},
|
|
578
|
+
{file = "numpy-2.4.2-cp314-cp314-macosx_10_15_x86_64.whl", hash = "sha256:444be170853f1f9d528428eceb55f12918e4fda5d8805480f36a002f1415e09b"},
|
|
579
|
+
{file = "numpy-2.4.2-cp314-cp314-macosx_11_0_arm64.whl", hash = "sha256:d1240d50adff70c2a88217698ca844723068533f3f5c5fa6ee2e3220e3bdb000"},
|
|
580
|
+
{file = "numpy-2.4.2-cp314-cp314-macosx_14_0_arm64.whl", hash = "sha256:7cdde6de52fb6664b00b056341265441192d1291c130e99183ec0d4b110ff8b1"},
|
|
581
|
+
{file = "numpy-2.4.2-cp314-cp314-macosx_14_0_x86_64.whl", hash = "sha256:cda077c2e5b780200b6b3e09d0b42205a3d1c68f30c6dceb90401c13bff8fe74"},
|
|
582
|
+
{file = "numpy-2.4.2-cp314-cp314-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:d30291931c915b2ab5717c2974bb95ee891a1cf22ebc16a8006bd59cd210d40a"},
|
|
583
|
+
{file = "numpy-2.4.2-cp314-cp314-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:bba37bc29d4d85761deed3954a1bc62be7cf462b9510b51d367b769a8c8df325"},
|
|
584
|
+
{file = "numpy-2.4.2-cp314-cp314-musllinux_1_2_aarch64.whl", hash = "sha256:b2f0073ed0868db1dcd86e052d37279eef185b9c8db5bf61f30f46adac63c909"},
|
|
585
|
+
{file = "numpy-2.4.2-cp314-cp314-musllinux_1_2_x86_64.whl", hash = "sha256:7f54844851cdb630ceb623dcec4db3240d1ac13d4990532446761baede94996a"},
|
|
586
|
+
{file = "numpy-2.4.2-cp314-cp314-win32.whl", hash = "sha256:12e26134a0331d8dbd9351620f037ec470b7c75929cb8a1537f6bfe411152a1a"},
|
|
587
|
+
{file = "numpy-2.4.2-cp314-cp314-win_amd64.whl", hash = "sha256:068cdb2d0d644cdb45670810894f6a0600797a69c05f1ac478e8d31670b8ee75"},
|
|
588
|
+
{file = "numpy-2.4.2-cp314-cp314-win_arm64.whl", hash = "sha256:6ed0be1ee58eef41231a5c943d7d1375f093142702d5723ca2eb07db9b934b05"},
|
|
589
|
+
{file = "numpy-2.4.2-cp314-cp314t-macosx_11_0_arm64.whl", hash = "sha256:98f16a80e917003a12c0580f97b5f875853ebc33e2eaa4bccfc8201ac6869308"},
|
|
590
|
+
{file = "numpy-2.4.2-cp314-cp314t-macosx_14_0_arm64.whl", hash = "sha256:20abd069b9cda45874498b245c8015b18ace6de8546bf50dfa8cea1696ed06ef"},
|
|
591
|
+
{file = "numpy-2.4.2-cp314-cp314t-macosx_14_0_x86_64.whl", hash = "sha256:e98c97502435b53741540a5717a6749ac2ada901056c7db951d33e11c885cc7d"},
|
|
592
|
+
{file = "numpy-2.4.2-cp314-cp314t-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:da6cad4e82cb893db4b69105c604d805e0c3ce11501a55b5e9f9083b47d2ffe8"},
|
|
593
|
+
{file = "numpy-2.4.2-cp314-cp314t-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:9e4424677ce4b47fe73c8b5556d876571f7c6945d264201180db2dc34f676ab5"},
|
|
594
|
+
{file = "numpy-2.4.2-cp314-cp314t-musllinux_1_2_aarch64.whl", hash = "sha256:2b8f157c8a6f20eb657e240f8985cc135598b2b46985c5bccbde7616dc9c6b1e"},
|
|
595
|
+
{file = "numpy-2.4.2-cp314-cp314t-musllinux_1_2_x86_64.whl", hash = "sha256:5daf6f3914a733336dab21a05cdec343144600e964d2fcdabaac0c0269874b2a"},
|
|
596
|
+
{file = "numpy-2.4.2-cp314-cp314t-win32.whl", hash = "sha256:8c50dd1fc8826f5b26a5ee4d77ca55d88a895f4e4819c7ecc2a9f5905047a443"},
|
|
597
|
+
{file = "numpy-2.4.2-cp314-cp314t-win_amd64.whl", hash = "sha256:fcf92bee92742edd401ba41135185866f7026c502617f422eb432cfeca4fe236"},
|
|
598
|
+
{file = "numpy-2.4.2-cp314-cp314t-win_arm64.whl", hash = "sha256:1f92f53998a17265194018d1cc321b2e96e900ca52d54c7c77837b71b9465181"},
|
|
599
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-macosx_10_15_x86_64.whl", hash = "sha256:89f7268c009bc492f506abd6f5265defa7cb3f7487dc21d357c3d290add45082"},
|
|
600
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-macosx_11_0_arm64.whl", hash = "sha256:e6dee3bb76aa4009d5a912180bf5b2de012532998d094acee25d9cb8dee3e44a"},
|
|
601
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-macosx_14_0_arm64.whl", hash = "sha256:cd2bd2bbed13e213d6b55dc1d035a4f91748a7d3edc9480c13898b0353708920"},
|
|
602
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-macosx_14_0_x86_64.whl", hash = "sha256:cf28c0c1d4c4bf00f509fa7eb02c58d7caf221b50b467bcb0d9bbf1584d5c821"},
|
|
603
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-manylinux_2_27_aarch64.manylinux_2_28_aarch64.whl", hash = "sha256:e04ae107ac591763a47398bb45b568fc38f02dbc4aa44c063f67a131f99346cb"},
|
|
604
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl", hash = "sha256:602f65afdef699cda27ec0b9224ae5dc43e328f4c24c689deaf77133dbee74d0"},
|
|
605
|
+
{file = "numpy-2.4.2-pp311-pypy311_pp73-win_amd64.whl", hash = "sha256:be71bf1edb48ebbbf7f6337b5bfd2f895d1902f6335a5830b20141fc126ffba0"},
|
|
606
|
+
{file = "numpy-2.4.2.tar.gz", hash = "sha256:659a6107e31a83c4e33f763942275fd278b21d095094044eb35569e86a21ddae"},
|
|
606
607
|
]
|
|
607
608
|
|
|
608
609
|
[[package]]
|
|
@@ -882,20 +883,20 @@ typing-extensions = ">=4.14.1"
|
|
|
882
883
|
|
|
883
884
|
[[package]]
|
|
884
885
|
name = "pyjwt"
|
|
885
|
-
version = "2.
|
|
886
|
+
version = "2.11.0"
|
|
886
887
|
description = "JSON Web Token implementation in Python"
|
|
887
888
|
optional = false
|
|
888
889
|
python-versions = ">=3.9"
|
|
889
890
|
files = [
|
|
890
|
-
{file = "
|
|
891
|
-
{file = "pyjwt-2.
|
|
891
|
+
{file = "pyjwt-2.11.0-py3-none-any.whl", hash = "sha256:94a6bde30eb5c8e04fee991062b534071fd1439ef58d2adc9ccb823e7bcd0469"},
|
|
892
|
+
{file = "pyjwt-2.11.0.tar.gz", hash = "sha256:35f95c1f0fbe5d5ba6e43f00271c275f7a1a4db1dab27bf708073b75318ea623"},
|
|
892
893
|
]
|
|
893
894
|
|
|
894
895
|
[package.extras]
|
|
895
896
|
crypto = ["cryptography (>=3.4.0)"]
|
|
896
|
-
dev = ["coverage[toml] (==
|
|
897
|
+
dev = ["coverage[toml] (==7.10.7)", "cryptography (>=3.4.0)", "pre-commit", "pytest (>=8.4.2,<9.0.0)", "sphinx", "sphinx-rtd-theme", "zope.interface"]
|
|
897
898
|
docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"]
|
|
898
|
-
tests = ["coverage[toml] (==
|
|
899
|
+
tests = ["coverage[toml] (==7.10.7)", "pytest (>=8.4.2,<9.0.0)"]
|
|
899
900
|
|
|
900
901
|
[[package]]
|
|
901
902
|
name = "pyparsing"
|
|
@@ -1211,13 +1212,13 @@ files = [
|
|
|
1211
1212
|
|
|
1212
1213
|
[[package]]
|
|
1213
1214
|
name = "starlette"
|
|
1214
|
-
version = "0.
|
|
1215
|
+
version = "0.52.1"
|
|
1215
1216
|
description = "The little ASGI library that shines."
|
|
1216
1217
|
optional = false
|
|
1217
1218
|
python-versions = ">=3.10"
|
|
1218
1219
|
files = [
|
|
1219
|
-
{file = "starlette-0.
|
|
1220
|
-
{file = "starlette-0.
|
|
1220
|
+
{file = "starlette-0.52.1-py3-none-any.whl", hash = "sha256:0029d43eb3d273bc4f83a08720b4912ea4b071087a3b48db01b7c839f7954d74"},
|
|
1221
|
+
{file = "starlette-0.52.1.tar.gz", hash = "sha256:834edd1b0a23167694292e94f597773bc3f89f362be6effee198165a35d62933"},
|
|
1221
1222
|
]
|
|
1222
1223
|
|
|
1223
1224
|
[package.dependencies]
|
|
@@ -1308,13 +1309,13 @@ test = ["pytest", "websockets"]
|
|
|
1308
1309
|
|
|
1309
1310
|
[[package]]
|
|
1310
1311
|
name = "wrapica"
|
|
1311
|
-
version = "2.40.1.
|
|
1312
|
+
version = "2.40.1.post20260211135303"
|
|
1312
1313
|
description = "Secondary level functions for ICAv2 based off libica"
|
|
1313
1314
|
optional = false
|
|
1314
1315
|
python-versions = "<3.15,>=3.12"
|
|
1315
1316
|
files = [
|
|
1316
|
-
{file = "wrapica-2.40.1.
|
|
1317
|
-
{file = "wrapica-2.40.1.
|
|
1317
|
+
{file = "wrapica-2.40.1.post20260211135303-py3-none-any.whl", hash = "sha256:fdaa1cd38afad6c49aee73cf850fc677d6c44888513a720179d4ef2ec9c8dccf"},
|
|
1318
|
+
{file = "wrapica-2.40.1.post20260211135303.tar.gz", hash = "sha256:9ed8dac997dfb7f0b330b0a17fc3a01951973ca9cf3707cc2a54c395e975c5aa"},
|
|
1318
1319
|
]
|
|
1319
1320
|
|
|
1320
1321
|
[package.dependencies]
|
|
@@ -1340,4 +1341,4 @@ toml = ["tomli_w (>=1.0.0,<2)"]
|
|
|
1340
1341
|
[metadata]
|
|
1341
1342
|
lock-version = "2.0"
|
|
1342
1343
|
python-versions = "^3.14, <3.15"
|
|
1343
|
-
content-hash = "
|
|
1344
|
+
content-hash = "12f2100ad25049928ca20166a4461fb1b983bded05699415292e3fe136b0e871"
|
|
@@ -12,7 +12,7 @@
|
|
|
12
12
|
"""
|
|
13
13
|
|
|
14
14
|
from typing import (
|
|
15
|
-
TypedDict, NotRequired, Literal, List, Union
|
|
15
|
+
TypedDict, NotRequired, Literal, List, Union, Dict
|
|
16
16
|
)
|
|
17
17
|
|
|
18
18
|
JobType = Literal['FASTQ_DECOMPRESSION']
|
|
@@ -99,6 +99,7 @@ class JobCreateParameters(TypedDict):
|
|
|
99
99
|
outputUriPrefix: NotRequired[str]
|
|
100
100
|
sampling: NotRequired[bool]
|
|
101
101
|
noSplitByLane: NotRequired[bool]
|
|
102
|
+
fileUriByFastqIdMap: NotRequired[Dict[str, List[str]]]
|
|
102
103
|
|
|
103
104
|
|
|
104
105
|
class JobQueryParameters(TypedDict):
|
package/monitored-queue/index.js
CHANGED
|
@@ -13,7 +13,7 @@ const aws_cloudwatch_actions_1 = require("aws-cdk-lib/aws-cloudwatch-actions");
|
|
|
13
13
|
* SNS topic.
|
|
14
14
|
*/
|
|
15
15
|
class MonitoredQueue extends constructs_1.Construct {
|
|
16
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "1.2.
|
|
16
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "1.2.2" };
|
|
17
17
|
queue;
|
|
18
18
|
deadLetterQueue;
|
|
19
19
|
alarm;
|
|
@@ -7,7 +7,7 @@ const aws_iam_1 = require("aws-cdk-lib/aws-iam");
|
|
|
7
7
|
* A construct which represents a named role that a Lambda function can assume.
|
|
8
8
|
*/
|
|
9
9
|
class NamedLambdaRole extends aws_iam_1.Role {
|
|
10
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "1.2.
|
|
10
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "1.2.2" };
|
|
11
11
|
constructor(scope, id, props) {
|
|
12
12
|
super(scope, id, {
|
|
13
13
|
assumedBy: new aws_iam_1.ServicePrincipal("lambda.amazonaws.com"),
|
package/package.json
CHANGED
|
@@ -15,7 +15,7 @@ const aws_cdk_lib_1 = require("aws-cdk-lib");
|
|
|
15
15
|
* to the provider framework.
|
|
16
16
|
*/
|
|
17
17
|
class ProviderFunction extends constructs_1.Construct {
|
|
18
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "1.2.
|
|
18
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "1.2.2" };
|
|
19
19
|
_function;
|
|
20
20
|
_response;
|
|
21
21
|
constructor(scope, id, props) {
|
|
@@ -23,7 +23,7 @@ exports.VPC_LOOKUP_PROPS = {
|
|
|
23
23
|
* Helper for looking up the shared OrcaBus VPC.
|
|
24
24
|
*/
|
|
25
25
|
class OrcaBusVpc {
|
|
26
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "1.2.
|
|
26
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "1.2.2" };
|
|
27
27
|
/**
|
|
28
28
|
* The shared VPC that is used by OrcaBus.
|
|
29
29
|
* @param scope
|
|
@@ -42,7 +42,7 @@ exports.SHARED_SECURITY_GROUP_NAME = "OrcaBusSharedComputeSecurityGroup";
|
|
|
42
42
|
* Helper for looking up the shared compute security group by name.
|
|
43
43
|
*/
|
|
44
44
|
class OrcaBusSharedComputeSecurityGroup {
|
|
45
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "1.2.
|
|
45
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "1.2.2" };
|
|
46
46
|
/**
|
|
47
47
|
* The shared security group that is used by compute resources to access the database.
|
|
48
48
|
* @param scope
|
package/shared-config/slack.js
CHANGED
|
@@ -11,7 +11,7 @@ exports.SLACK_ALERTS_SNS_TOPIC = "AwsChatBotTopic-alerts";
|
|
|
11
11
|
* A helper class to construct the arn for the slack SNS topic.
|
|
12
12
|
*/
|
|
13
13
|
class SlackAlerts {
|
|
14
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "1.2.
|
|
14
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "1.2.2" };
|
|
15
15
|
/**
|
|
16
16
|
* Format the ARN for the slack alerts SNS topic for the current stack.
|
|
17
17
|
* @param stack
|