@orcabus/platform-cdk-constructs 0.0.95 → 0.0.96
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.jsii +2 -2
- package/api-gateway/api-gateway.js +1 -1
- package/deployment-stack-pipeline/artifact-bucket.js +1 -1
- package/deployment-stack-pipeline/pipeline.js +1 -1
- package/dynamodb/index.js +2 -2
- package/ecs/index.js +1 -1
- package/eventbridge-rules/sfn-slack-notification.js +1 -1
- package/lambda/index.js +1 -1
- package/monitored-queue/index.js +1 -1
- package/named-lambda-role/index.js +1 -1
- package/package.json +1 -1
- package/provider-function/index.js +1 -1
- package/shared-config/file-manager.js +6 -6
- package/shared-config/networking.js +2 -2
- package/shared-config/s3.d.ts +12 -0
- package/shared-config/s3.js +18 -2
- package/shared-config/slack.js +1 -1
package/.jsii
CHANGED
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@@ -7163,6 +7163,6 @@
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"symbolId": "shared-config/slack:SlackAlerts"
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}
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},
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"version": "0.0.
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"fingerprint": "
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"version": "0.0.96",
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"fingerprint": "Re6bzpleDW744afYQA2WMtPW+LFjfQUMhVTC1NUS/cM="
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}
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@@ -15,7 +15,7 @@ const aws_lambda_1 = require("aws-cdk-lib/aws-lambda");
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const aws_route53_targets_1 = require("aws-cdk-lib/aws-route53-targets");
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const config_1 = require("./config");
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class OrcaBusApiGateway extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.96" };
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/**
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* The AWS region where the API Gateway is deployed.
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*/
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@@ -13,7 +13,7 @@ exports.CROSS_DEPLOYMENT_ARTIFACT_BUCKET_NAME = "orcabus-cross-deployment-codepi
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exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ALIAS = "orcabus-cross-deployment-codepipeline-artifact";
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exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ARN_SSM_PARAMETER_NAME = "/orcabus/deployment-stack-pipeline/artifact-bucket/kms-key-arn";
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class CrossDeploymentArtifactBucket extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.96" };
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/**
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* The S3 bucket used to store artifacts for cross-deployment pipelines.
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*/
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@@ -32,7 +32,7 @@ exports.DEFAULT_SYNTH_STEP_PARTIAL_BUILD_SPEC = {
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* before using this construct.
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*/
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class DeploymentStackPipeline extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.96" };
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/**
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* The code pipeline construct that is created.
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*/
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package/dynamodb/index.js
CHANGED
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@@ -40,7 +40,7 @@ const dynamodb = __importStar(require("aws-cdk-lib/aws-dynamodb"));
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const aws_cdk_lib_1 = require("aws-cdk-lib");
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const config_1 = require("./config");
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class DynamoDbPartitionedConstruct extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.96" };
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table;
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constructor(scope, id, props) {
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super(scope, id);
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@@ -75,7 +75,7 @@ class DynamoDbPartitionedConstruct extends constructs_1.Construct {
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}
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exports.DynamoDbPartitionedConstruct = DynamoDbPartitionedConstruct;
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class DynamoDbNonPartitionedConstruct extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.96" };
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table;
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constructor(scope, id, props) {
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super(scope, id);
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package/ecs/index.js
CHANGED
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@@ -55,7 +55,7 @@ exports.LAMBDA_ARCHITECTURE_MAP = {
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['ARM64']: lambda.Architecture.ARM_64
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};
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class EcsFargateTaskConstruct extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.96" };
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cluster;
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taskDefinition;
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taskExecutionRole;
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@@ -17,7 +17,7 @@ var SfnEventStatus;
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SfnEventStatus["ABORTED"] = "ABORTED";
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})(SfnEventStatus || (exports.SfnEventStatus = SfnEventStatus = {}));
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class SfnSlackNotification extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "0.0.96" };
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rule;
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constructor(scope, id, props) {
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super(scope, id);
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package/lambda/index.js
CHANGED
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@@ -57,7 +57,7 @@ function getPythonUvDockerImage() {
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return aws_cdk_lib_1.DockerImage.fromBuild(path_1.default.join(__dirname, 'build_python'));
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}
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class PythonUvFunction extends aws_lambda_python_alpha_1.PythonFunction {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.96" };
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// Class constructs, to be used for caching the layers
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// This means that if there are multiple lambdas throughout the stack
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// They will all use the same layer
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package/monitored-queue/index.js
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@@ -13,7 +13,7 @@ const aws_cloudwatch_actions_1 = require("aws-cdk-lib/aws-cloudwatch-actions");
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* SNS topic.
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*/
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class MonitoredQueue extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.96" };
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queue;
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deadLetterQueue;
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alarm;
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@@ -7,7 +7,7 @@ const aws_iam_1 = require("aws-cdk-lib/aws-iam");
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* A construct which represents a named role that a Lambda function can assume.
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*/
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class NamedLambdaRole extends aws_iam_1.Role {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.96" };
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constructor(scope, id, props) {
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super(scope, id, {
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assumedBy: new aws_iam_1.ServicePrincipal("lambda.amazonaws.com"),
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package/package.json
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@@ -15,7 +15,7 @@ const aws_cdk_lib_1 = require("aws-cdk-lib");
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* to the provider framework.
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*/
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class ProviderFunction extends constructs_1.Construct {
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.
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static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.96" };
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_function;
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_response;
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constructor(scope, id, props) {
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@@ -10,22 +10,22 @@ const secrets_1 = require("./secrets");
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// Regular buckets where all data is available and ingested.
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exports.FILE_MANAGER_BUCKETS = {
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BETA: [
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-
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s3_1.ONCOANALYSER_BUCKET.BETA,
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`ntsm-fingerprints-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.region}`,
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`fastq-manager-sequali-outputs-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.region}`,
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`data-sharing-artifacts-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.BETA_ENVIRONMENT.region}`,
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"filemanager-inventory-test",
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],
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GAMMA: [
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s3_1.ONCOANALYSER_BUCKET.GAMMA,
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`ntsm-fingerprints-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.region}`,
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`fastq-manager-sequali-outputs-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.region}`,
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`data-sharing-artifacts-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.account}-${deployment_stack_pipeline_1.GAMMA_ENVIRONMENT.region}`,
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],
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PROD: [
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s3_1.ONCOANALYSER_BUCKET.PROD,
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s3_1.ANALYSIS_ARCHIVE_BUCKET,
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s3_1.FASTQ_ARCHIVE_BUCKET,
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`ntsm-fingerprints-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.account}-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.region}`,
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`fastq-manager-sequali-outputs-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.account}-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.region}`,
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`data-sharing-artifacts-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.account}-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.region}`,
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@@ -57,4 +57,4 @@ exports.FILE_MANAGER_ACCESS_KEY_ARNS = {
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exports.FILE_MANAGER_INGEST_ROLE = "orcabus-file-manager-ingest-role";
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exports.FILE_MANAGER_PRESIGN_USER = "orcabus-file-manager-presign-user"; // pragma: allowlist secret
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exports.FILE_MANAGER_DOMAIN_PREFIX = "file";
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//# sourceMappingURL=data:application/json;base64,
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//# 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@@ -23,7 +23,7 @@ exports.VPC_LOOKUP_PROPS = {
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23
23
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* Helper for looking up the shared OrcaBus VPC.
|
|
24
24
|
*/
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|
25
25
|
class OrcaBusVpc {
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26
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.
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|
26
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.96" };
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27
27
|
/**
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28
28
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* The shared VPC that is used by OrcaBus.
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29
29
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* @param scope
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@@ -42,7 +42,7 @@ exports.SHARED_SECURITY_GROUP_NAME = "OrcaBusSharedComputeSecurityGroup";
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42
42
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* Helper for looking up the shared compute security group by name.
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43
43
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*/
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44
44
|
class OrcaBusSharedComputeSecurityGroup {
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45
|
-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.
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|
45
|
+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.96" };
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|
46
46
|
/**
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|
47
47
|
* The shared security group that is used by compute resources to access the database.
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|
48
48
|
* @param scope
|
package/shared-config/s3.d.ts
CHANGED
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@@ -15,3 +15,15 @@ export declare const TEST_DATA_BUCKET = "test-data-503977275616-ap-southeast-2";
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15
15
|
* The default S3 prefixes used for pipeline data.
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16
16
|
*/
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|
17
17
|
export declare const PIPELINE_CACHE_PREFIX: Record<StageName, string>;
|
|
18
|
+
/**
|
|
19
|
+
* The oncoanalyser bucket.
|
|
20
|
+
*/
|
|
21
|
+
export declare const ONCOANALYSER_BUCKET: Record<StageName, string>;
|
|
22
|
+
/**
|
|
23
|
+
* The analysis archive bucket.
|
|
24
|
+
*/
|
|
25
|
+
export declare const ANALYSIS_ARCHIVE_BUCKET = "archive-prod-analysis-503977275616-ap-southeast-2";
|
|
26
|
+
/**
|
|
27
|
+
* The fastq archive bucket.
|
|
28
|
+
*/
|
|
29
|
+
export declare const FASTQ_ARCHIVE_BUCKET = "archive-prod-fastq-503977275616-ap-southeast-2";
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package/shared-config/s3.js
CHANGED
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@@ -1,6 +1,6 @@
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1
1
|
"use strict";
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|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
exports.PIPELINE_CACHE_PREFIX = exports.TEST_DATA_BUCKET = exports.REFERENCE_DATA_BUCKET = exports.PIPELINE_CACHE_BUCKET = void 0;
|
|
3
|
+
exports.FASTQ_ARCHIVE_BUCKET = exports.ANALYSIS_ARCHIVE_BUCKET = exports.ONCOANALYSER_BUCKET = exports.PIPELINE_CACHE_PREFIX = exports.TEST_DATA_BUCKET = exports.REFERENCE_DATA_BUCKET = exports.PIPELINE_CACHE_BUCKET = void 0;
|
|
4
4
|
/**
|
|
5
5
|
* The default S3 bucket names used for pipeline data.
|
|
6
6
|
*/
|
|
@@ -25,4 +25,20 @@ exports.PIPELINE_CACHE_PREFIX = {
|
|
|
25
25
|
GAMMA: "byob-icav2/staging/",
|
|
26
26
|
PROD: "byob-icav2/production/",
|
|
27
27
|
};
|
|
28
|
-
|
|
28
|
+
/**
|
|
29
|
+
* The oncoanalyser bucket.
|
|
30
|
+
*/
|
|
31
|
+
exports.ONCOANALYSER_BUCKET = {
|
|
32
|
+
BETA: 'umccr-temp-dev',
|
|
33
|
+
GAMMA: 'umccr-temp-stg',
|
|
34
|
+
PROD: 'org.umccr.data.oncoanalyser',
|
|
35
|
+
};
|
|
36
|
+
/**
|
|
37
|
+
* The analysis archive bucket.
|
|
38
|
+
*/
|
|
39
|
+
exports.ANALYSIS_ARCHIVE_BUCKET = "archive-prod-analysis-503977275616-ap-southeast-2";
|
|
40
|
+
/**
|
|
41
|
+
* The fastq archive bucket.
|
|
42
|
+
*/
|
|
43
|
+
exports.FASTQ_ARCHIVE_BUCKET = "archive-prod-fastq-503977275616-ap-southeast-2";
|
|
44
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+
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package/shared-config/slack.js
CHANGED
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@@ -11,7 +11,7 @@ exports.SLACK_ALERTS_SNS_TOPIC = "AwsChatBotTopic-alerts";
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11
11
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* A helper class to construct the arn for the slack SNS topic.
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|
12
12
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*/
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13
13
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class SlackAlerts {
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14
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-
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.
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|
14
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+
static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.96" };
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|
15
15
|
/**
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|
16
16
|
* Format the ARN for the slack alerts SNS topic for the current stack.
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|
17
17
|
* @param stack
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