@orcabus/platform-cdk-constructs 0.0.79 → 0.0.81

package/.jsii

@@ -7163,6 +7163,6 @@
       "symbolId": "shared-config/slack:SlackAlerts"
     }
   },
-  "version": "0.0.79",
-  "fingerprint": "U/v9TzmKlKu10VoC5ePrhoNX6anGEibIyYgkCEJEc/o="
+  "version": "0.0.81",
+  "fingerprint": "XFIclUwPaWZibvImPUiwMSZv01Z2jQZDcabz0fAxp7Q="
 }

package/api-gateway/api-gateway.js

@@ -15,7 +15,7 @@ const aws_lambda_1 = require("aws-cdk-lib/aws-lambda");
 const aws_route53_targets_1 = require("aws-cdk-lib/aws-route53-targets");
 const config_1 = require("./config");
 class OrcaBusApiGateway extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.81" };
     /**
      * The AWS region where the API Gateway is deployed.
      */

package/deployment-stack-pipeline/artifact-bucket.js

@@ -13,7 +13,7 @@ exports.CROSS_DEPLOYMENT_ARTIFACT_BUCKET_NAME = "orcabus-cross-deployment-codepi
 exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ALIAS = "orcabus-cross-deployment-codepipeline-artifact";
 exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ARN_SSM_PARAMETER_NAME = "/orcabus/deployment-stack-pipeline/artifact-bucket/kms-key-arn";
 class CrossDeploymentArtifactBucket extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.81" };
     /**
      * The S3 bucket used to store artifacts for cross-deployment pipelines.
      */

package/deployment-stack-pipeline/pipeline.js

@@ -32,7 +32,7 @@ exports.DEFAULT_SYNTH_STEP_PARTIAL_BUILD_SPEC = {
  * before using this construct.
  */
 class DeploymentStackPipeline extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.81" };
     /**
      * The code pipeline construct that is created.
      */

package/dynamodb/index.js

@@ -40,7 +40,7 @@ const dynamodb = __importStar(require("aws-cdk-lib/aws-dynamodb"));
 const aws_cdk_lib_1 = require("aws-cdk-lib");
 const config_1 = require("./config");
 class DynamoDbPartitionedConstruct extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.81" };
     table;
     constructor(scope, id, props) {
         super(scope, id);
@@ -75,7 +75,7 @@ class DynamoDbPartitionedConstruct extends constructs_1.Construct {
 }
 exports.DynamoDbPartitionedConstruct = DynamoDbPartitionedConstruct;
 class DynamoDbNonPartitionedConstruct extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.81" };
     table;
     constructor(scope, id, props) {
         super(scope, id);

package/ecs/index.js

@@ -55,7 +55,7 @@ exports.LAMBDA_ARCHITECTURE_MAP = {
     ['ARM64']: lambda.Architecture.ARM_64
 };
 class EcsFargateTaskConstruct extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.81" };
     cluster;
     taskDefinition;
     taskExecutionRole;

package/eventbridge-rules/sfn-slack-notification.js

@@ -17,7 +17,7 @@ var SfnEventStatus;
     SfnEventStatus["ABORTED"] = "ABORTED";
 })(SfnEventStatus || (exports.SfnEventStatus = SfnEventStatus = {}));
 class SfnSlackNotification extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.eventbridgeRule.SfnSlackNotification", version: "0.0.81" };
     rule;
     constructor(scope, id, props) {
         super(scope, id);

package/lambda/index.js

@@ -57,7 +57,7 @@ function getPythonUvDockerImage() {
     return aws_cdk_lib_1.DockerImage.fromBuild(path_1.default.join(__dirname, 'build_python'));
 }
 class PythonUvFunction extends aws_lambda_python_alpha_1.PythonFunction {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.81" };
     // Class constructs, to be used for caching the layers
     // This means that if there are multiple lambdas throughout the stack
     // They will all use the same layer

package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/data_sharing/__init__.py

@@ -1,8 +1,14 @@
 # FIMXE Implement the following imports
-from typing import Optional, Dict
+from typing import Optional, List, Dict, TypedDict, NotRequired
 
 from .globals import DATA_SHARING_SUBDOMAIN_NAME
-from ..utils.requests_helpers import get_url, get_request, get_request_response_results, patch_request
+from ..utils.requests_helpers import (
+    get_url,
+    get_request,
+    get_request_response_results,
+    patch_request,
+    post_request,
+)
 
 
 # Get url for the subdomain
@@ -20,22 +26,18 @@ def get_data_sharing_url(endpoint: str) -> str:
 
 # Wrappers
 def get_data_sharing_request(
-        endpoint: str,
-        params: Optional[Dict] = None,
+    endpoint: str,
+    params: Optional[Dict] = None,
 ):
-    return get_request(
-        url=get_data_sharing_url(endpoint),
-        params=params
-    )
+    return get_request(url=get_data_sharing_url(endpoint), params=params)
 
 
 def get_data_sharing_request_response_results(
-        endpoint: str,
-        params: Optional[Dict] = None,
+    endpoint: str,
+    params: Optional[Dict] = None,
 ):
     return get_request_response_results(
-        url=get_data_sharing_url(endpoint),
-        params=params
+        url=get_data_sharing_url(endpoint), params=params
     )
 
 
@@ -43,26 +45,57 @@ def data_sharing_patch_request(
     endpoint: str,
     json_data: Optional[Dict] = None,
 ):
-    return patch_request(
-        url=get_data_sharing_url(endpoint),
-        json_data=json_data
-    )
+    return patch_request(url=get_data_sharing_url(endpoint), json_data=json_data)
 
 
 def data_sharing_post_request(
     endpoint: str,
     json_data: Optional[Dict] = None,
 ):
-    return patch_request(
-        url=get_data_sharing_url(endpoint),
-        json_data=json_data
+    return patch_request(url=get_data_sharing_url(endpoint), json_data=json_data)
+
+
+# Models
+class PackageRequestDict(TypedDict):
+    libraryIdList: List[str]
+    dataTypeList: List[str]
+    portalRunIdList: NotRequired[List[str]]
+    defrostArchivedFastqs: NotRequired[bool]
+    useWorkflowFilters: NotRequired[bool]
+    instrumentRunIdList: NotRequired[List[str]]
+
+
+def create_package(
+    package_name: str,
+    package_request: PackageRequestDict,
+) -> Dict:
+    response = post_request(
+        json_data={
+            "packageName": package_name,
+            "packageRequest": package_request,
+        },
+        url=get_data_sharing_url("/api/v1/package"),
     )
 
+    return response
 
-from .query_helpers import (
-    get_package,
-    get_push_job
-)
+
+def push_package(
+    package_id: str,
+    location_uri: str,
+) -> Dict:
+
+    response = post_request(
+        json_data={
+            "shareDestination": location_uri,
+        },
+        url=get_data_sharing_url(f"/api/v1/package/{package_id}:push"),
+    )
+
+    return response
+
+
+from .query_helpers import get_package, get_push_job
 
 from .update_helpers import (
     update_package_status,
@@ -74,6 +107,9 @@ __all__ = [
     "get_package",
     "get_push_job",
     # Push job helpers
+    "push_package",
     "update_package_status",
     "update_push_job_status",
-]
+    # Package helpers
+    "create_package",
+]

package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/utils/aws_helpers.py

@@ -107,17 +107,29 @@ def get_ssm_value(parameter_name) -> str:
 
     return get_ssm_parameter_response['Parameter']['Value']
 
+ORCABUS_ACCESS_TOKEN = None
+HOSTNAME = None
 
 def get_orcabus_token() -> str:
     """
     From the AWS Secrets Manager, retrieve the OrcaBus token.
     :return:
     """
-    return (
-        json.loads(
-            get_secret_value(environ.get("ORCABUS_TOKEN_SECRET_ID"))
-        )['id_token']
-    )
+    global ORCABUS_ACCESS_TOKEN
+    if ORCABUS_ACCESS_TOKEN is None:
+        ORCABUS_ACCESS_TOKEN = (
+            json.loads(
+                get_secret_value(environ.get("ORCABUS_TOKEN_SECRET_ID"))
+            )['id_token']
+        )
+    return ORCABUS_ACCESS_TOKEN
+
 
 def get_hostname() -> str:
-    return get_ssm_value(environ.get("HOSTNAME_SSM_PARAMETER_NAME"))
+    global HOSTNAME
+
+    if HOSTNAME is None:
+        HOSTNAME = (
+            get_ssm_value(environ.get("HOSTNAME_SSM_PARAMETER_NAME"))
+        )
+    return HOSTNAME

package/monitored-queue/index.js

@@ -13,7 +13,7 @@ const aws_cloudwatch_actions_1 = require("aws-cdk-lib/aws-cloudwatch-actions");
  * SNS topic.
  */
 class MonitoredQueue extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.81" };
     queue;
     deadLetterQueue;
     alarm;

package/named-lambda-role/index.js

@@ -7,7 +7,7 @@ const aws_iam_1 = require("aws-cdk-lib/aws-iam");
  * A construct which represents a named role that a Lambda function can assume.
  */
 class NamedLambdaRole extends aws_iam_1.Role {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.81" };
     constructor(scope, id, props) {
         super(scope, id, {
             assumedBy: new aws_iam_1.ServicePrincipal("lambda.amazonaws.com"),

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@orcabus/platform-cdk-constructs",
-  "version": "0.0.79",
+  "version": "0.0.81",
   "description": "CDK Package for OrcaBus infrastructure.",
   "main": "index.ts",
   "types": "index.d.ts",

package/provider-function/index.js

@@ -15,7 +15,7 @@ const aws_cdk_lib_1 = require("aws-cdk-lib");
  * to the provider framework.
  */
 class ProviderFunction extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.81" };
     _function;
     _response;
     constructor(scope, id, props) {

package/shared-config/file-manager.js

@@ -32,6 +32,7 @@ exports.FILE_MANAGER_BUCKETS = {
         `pipeline-montauk-977251586657-${deployment_stack_pipeline_1.PROD_ENVIRONMENT.region}`,
         "research-data-550435500918-ap-southeast-2",
         "project-data-889522050439-ap-southeast-2",
+        "project-data-491085415398-ap-southeast-2",
     ],
 };
 // Cache buckets where the `byob-icav2/*/cache/*` pattern is ignored for the ingester.
@@ -55,4 +56,4 @@ exports.FILE_MANAGER_ACCESS_KEY_ARNS = {
 exports.FILE_MANAGER_INGEST_ROLE = "orcabus-file-manager-ingest-role";
 exports.FILE_MANAGER_PRESIGN_USER = "orcabus-file-manager-presign-user"; // pragma: allowlist secret
 exports.FILE_MANAGER_DOMAIN_PREFIX = "file";
-//# 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
+//# 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package/shared-config/networking.js

@@ -23,7 +23,7 @@ exports.VPC_LOOKUP_PROPS = {
  * Helper for looking up the shared OrcaBus VPC.
  */
 class OrcaBusVpc {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.81" };
     /**
      * The shared VPC that is used by OrcaBus.
      * @param scope
@@ -42,7 +42,7 @@ exports.SHARED_SECURITY_GROUP_NAME = "OrcaBusSharedComputeSecurityGroup";
  * Helper for looking up the shared compute security group by name.
  */
 class OrcaBusSharedComputeSecurityGroup {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.81" };
     /**
      * The shared security group that is used by compute resources to access the database.
      * @param scope

package/shared-config/slack.js

@@ -11,7 +11,7 @@ exports.SLACK_ALERTS_SNS_TOPIC = "AwsChatBotTopic-alerts";
  * A helper class to construct the arn for the slack SNS topic.
  */
 class SlackAlerts {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.79" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.81" };
     /**
      * Format the ARN for the slack alerts SNS topic for the current stack.
      * @param stack