@orcabus/platform-cdk-constructs 0.0.49 → 0.0.51

package/lambda/layers/icav2_tools/pyproject.toml

@@ -14,8 +14,8 @@ homepage = "https://github.com/orcabus/platform-cdk-constructs"
 repository = "https://github.com/orcabus/platform-cdk-constructs"
 
 [tool.poetry.dependencies]
-python = "^3.12, <3.13"
-wrapica = "2.27.1.post20240830140737"
+python = ">3.12,<3.13"
+wrapica = "2.37.0.dev20250731075657"
 
 [tool.poetry.group.dev]
 optional = true
@@ -23,4 +23,9 @@ optional = true
 [tool.poetry.group.dev.dependencies]
 pytest = "^7.0.0"  # For testing only
 # For typehinting only, not required at runtime
-mypy-boto3-secretsmanager = "^1.34"
+mypy-boto3-secretsmanager = ">=1.34.0, <2"
+
+[[tool.poetry.source]]
+name = "testpypi"
+url = "https://test.pypi.org/simple/"
+priority = "supplemental"

package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/data_sharing/models.py

@@ -1,4 +1,5 @@
-from datetime import datetime
+#!/usr/bin/env python3
+
 from typing import Literal, TypedDict, NotRequired, Union
 
 PackageStatusType = Literal[

package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/fastq/query_helpers.py

@@ -18,12 +18,15 @@ get_fastqs_in_project
 get_fastq_by_rgid
 
 """
+
+# Standard imports
 from functools import reduce
 from itertools import batched
 from operator import concat
 from typing import List, Unpack
 from fastapi.encoders import jsonable_encoder
 
+# Local imports
 from . import get_fastq_request_response_results, get_fastq_request
 from .globals import FASTQ_ENDPOINT, FASTQ_SET_ENDPOINT, RGID_ENDPOINT
 from .models import (

package/lambda/layers/orcabus_api_tools/src/orcabus_api_tools/utils/requests_helpers.py

@@ -1,4 +1,5 @@
 #!/usr/bin/env python3
+import json
 from typing import Dict, Optional, List, Union
 from urllib.parse import urlunparse, unquote
 
@@ -7,6 +8,7 @@ import requests
 import logging
 from copy import deepcopy
 
+from fastapi.encoders import jsonable_encoder
 from requests import HTTPError
 
 # Locals
@@ -62,12 +64,24 @@ def get_request_response_results(url: str, params: Optional[Dict] = None) -> Lis
         params if params is not None else {}
     )
 
+    # Iterate through each of the params, if any of the values
+    # are boolean, convert them to strings via json.dumps
+    req_params = dict(map(
+        lambda kv_iter_: (
+            kv_iter_[0], (
+                json.dumps(kv_iter_[1])
+                if isinstance(kv_iter_[1], bool)
+                else kv_iter_[1]
+            )
+        ),
+        req_params.items()
+    ))
 
     # Make the request
     response = requests.get(
         url,
         headers=headers,
-        params=req_params
+        params=jsonable_encoder(req_params)
     )
 
     response.raise_for_status()

package/monitored-queue/index.js

@@ -13,7 +13,7 @@ const aws_cloudwatch_actions_1 = require("aws-cdk-lib/aws-cloudwatch-actions");
  * SNS topic.
  */
 class MonitoredQueue extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.51" };
     queue;
     deadLetterQueue;
     alarm;

package/named-lambda-role/index.js

@@ -7,7 +7,7 @@ const aws_iam_1 = require("aws-cdk-lib/aws-iam");
  * A construct which represents a named role that a Lambda function can assume.
  */
 class NamedLambdaRole extends aws_iam_1.Role {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.51" };
     constructor(scope, id, props) {
         super(scope, id, {
             assumedBy: new aws_iam_1.ServicePrincipal("lambda.amazonaws.com"),

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@orcabus/platform-cdk-constructs",
-  "version": "0.0.49",
+  "version": "0.0.51",
   "description": "CDK Package for OrcaBus infrastructure.",
   "main": "index.ts",
   "types": "index.d.ts",

package/provider-function/index.js

@@ -15,7 +15,7 @@ const aws_cdk_lib_1 = require("aws-cdk-lib");
  * to the provider framework.
  */
 class ProviderFunction extends constructs_1.Construct {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.51" };
     _function;
     _response;
     constructor(scope, id, props) {

package/shared-config/networking.js

@@ -23,7 +23,7 @@ exports.VPC_LOOKUP_PROPS = {
  * Helper for looking up the shared OrcaBus VPC.
  */
 class OrcaBusVpc {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.51" };
     /**
      * The shared VPC that is used by OrcaBus.
      * @param scope
@@ -42,7 +42,7 @@ exports.SHARED_SECURITY_GROUP_NAME = "OrcaBusSharedComputeSecurityGroup";
  * Helper for looking up the shared compute security group by name.
  */
 class OrcaBusSharedComputeSecurityGroup {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.51" };
     /**
      * The shared security group that is used by compute resources to access the database.
      * @param scope

package/shared-config/slack.js

@@ -11,7 +11,7 @@ exports.SLACK_ALERTS_SNS_TOPIC = "AwsChatBotTopic-alerts";
  * A helper class to construct the arn for the slack SNS topic.
  */
 class SlackAlerts {
-    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.49" };
+    static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.51" };
     /**
      * Format the ARN for the slack alerts SNS topic for the current stack.
      * @param stack