@orcabus/platform-cdk-constructs 0.0.49 → 0.0.50

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package/.jsii CHANGED
@@ -6756,6 +6756,6 @@
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  "symbolId": "shared-config/slack:SlackAlerts"
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  }
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  },
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- "version": "0.0.49",
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- "fingerprint": "ryuGoaFcNBJKbhySrr+XolDNlKAn8ICAeqC53qofGJw="
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+ "version": "0.0.50",
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+ "fingerprint": "2RMpgZmvJDCLnYStByeAGnRgsLrczcJNuWGls7kZDL0="
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  }
@@ -15,7 +15,7 @@ const aws_lambda_1 = require("aws-cdk-lib/aws-lambda");
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  const aws_route53_targets_1 = require("aws-cdk-lib/aws-route53-targets");
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  const config_1 = require("./config");
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  class OrcaBusApiGateway extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.apigateway.OrcaBusApiGateway", version: "0.0.50" };
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  /**
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  * The AWS region where the API Gateway is deployed.
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  */
@@ -13,7 +13,7 @@ exports.CROSS_DEPLOYMENT_ARTIFACT_BUCKET_NAME = "orcabus-cross-deployment-codepi
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  exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ALIAS = "orcabus-cross-deployment-codepipeline-artifact";
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  exports.CROSS_DEPLOYMENT_ARTIFACT_KMS_ARN_SSM_PARAMETER_NAME = "/orcabus/deployment-stack-pipeline/artifact-bucket/kms-key-arn";
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  class CrossDeploymentArtifactBucket extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.CrossDeploymentArtifactBucket", version: "0.0.50" };
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  /**
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  * The S3 bucket used to store artifacts for cross-deployment pipelines.
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  */
@@ -32,7 +32,7 @@ exports.DEFAULT_SYNTH_STEP_PARTIAL_BUILD_SPEC = {
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  * before using this construct.
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  */
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  class DeploymentStackPipeline extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.deploymentPipeline.DeploymentStackPipeline", version: "0.0.50" };
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  /**
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  * The code pipeline construct that is created.
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  */
package/dynamodb/index.js CHANGED
@@ -40,7 +40,7 @@ const dynamodb = __importStar(require("aws-cdk-lib/aws-dynamodb"));
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  const aws_cdk_lib_1 = require("aws-cdk-lib");
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  const config_1 = require("./config");
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  class DynamoDbPartitionedConstruct extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbPartitionedConstruct", version: "0.0.50" };
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  table;
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  constructor(scope, id, props) {
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  super(scope, id);
@@ -75,7 +75,7 @@ class DynamoDbPartitionedConstruct extends constructs_1.Construct {
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  }
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  exports.DynamoDbPartitionedConstruct = DynamoDbPartitionedConstruct;
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  class DynamoDbNonPartitionedConstruct extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.dynamodb.DynamoDbNonPartitionedConstruct", version: "0.0.50" };
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  table;
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  constructor(scope, id, props) {
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  super(scope, id);
package/ecs/index.js CHANGED
@@ -55,7 +55,7 @@ exports.LAMBDA_ARCHITECTURE_MAP = {
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  ['ARM64']: lambda.Architecture.ARM_64
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  };
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  class EcsFargateTaskConstruct extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.ecs.EcsFargateTaskConstruct", version: "0.0.50" };
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  cluster;
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  taskDefinition;
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  taskExecutionRole;
package/lambda/index.js CHANGED
@@ -56,7 +56,7 @@ function getPythonUvDockerImage() {
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  return aws_cdk_lib_1.DockerImage.fromBuild(path_1.default.join(__dirname, 'build_python'));
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  }
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  class PythonUvFunction extends aws_lambda_python_alpha_1.PythonFunction {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.lambda.PythonUvFunction", version: "0.0.50" };
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  // Class constructs, to be used for caching the layers
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  // This means that if there are multiple lambdas throughout the stack
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  // They will all use the same layer
@@ -18,12 +18,15 @@ get_fastqs_in_project
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  get_fastq_by_rgid
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  """
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+
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+ # Standard imports
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  from functools import reduce
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  from itertools import batched
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  from operator import concat
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  from typing import List, Unpack
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  from fastapi.encoders import jsonable_encoder
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+ # Local imports
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  from . import get_fastq_request_response_results, get_fastq_request
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  from .globals import FASTQ_ENDPOINT, FASTQ_SET_ENDPOINT, RGID_ENDPOINT
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  from .models import (
@@ -1,4 +1,5 @@
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  #!/usr/bin/env python3
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+ import json
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  from typing import Dict, Optional, List, Union
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  from urllib.parse import urlunparse, unquote
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@@ -7,6 +8,7 @@ import requests
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  import logging
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  from copy import deepcopy
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+ from fastapi.encoders import jsonable_encoder
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  from requests import HTTPError
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  # Locals
@@ -62,12 +64,24 @@ def get_request_response_results(url: str, params: Optional[Dict] = None) -> Lis
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  params if params is not None else {}
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  )
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+ # Iterate through each of the params, if any of the values
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+ # are boolean, convert them to strings via json.dumps
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+ req_params = dict(map(
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+ lambda kv_iter_: (
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+ kv_iter_[0], (
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+ json.dumps(kv_iter_[1])
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+ if isinstance(kv_iter_[1], bool)
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+ else kv_iter_[1]
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+ )
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+ ),
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+ req_params.items()
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+ ))
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  # Make the request
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  response = requests.get(
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  url,
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  headers=headers,
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- params=req_params
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+ params=jsonable_encoder(req_params)
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  )
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  response.raise_for_status()
@@ -13,7 +13,7 @@ const aws_cloudwatch_actions_1 = require("aws-cdk-lib/aws-cloudwatch-actions");
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  * SNS topic.
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  */
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  class MonitoredQueue extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.monitoredQueue.MonitoredQueue", version: "0.0.50" };
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  queue;
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  deadLetterQueue;
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  alarm;
@@ -7,7 +7,7 @@ const aws_iam_1 = require("aws-cdk-lib/aws-iam");
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  * A construct which represents a named role that a Lambda function can assume.
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  */
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  class NamedLambdaRole extends aws_iam_1.Role {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.namedLambdaRole.NamedLambdaRole", version: "0.0.50" };
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  constructor(scope, id, props) {
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  super(scope, id, {
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  assumedBy: new aws_iam_1.ServicePrincipal("lambda.amazonaws.com"),
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@orcabus/platform-cdk-constructs",
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- "version": "0.0.49",
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+ "version": "0.0.50",
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  "description": "CDK Package for OrcaBus infrastructure.",
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  "main": "index.ts",
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  "types": "index.d.ts",
@@ -15,7 +15,7 @@ const aws_cdk_lib_1 = require("aws-cdk-lib");
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  * to the provider framework.
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  */
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  class ProviderFunction extends constructs_1.Construct {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.provider.ProviderFunction", version: "0.0.50" };
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  _function;
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  _response;
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  constructor(scope, id, props) {
@@ -23,7 +23,7 @@ exports.VPC_LOOKUP_PROPS = {
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  * Helper for looking up the shared OrcaBus VPC.
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  */
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  class OrcaBusVpc {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusVpc", version: "0.0.50" };
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  /**
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  * The shared VPC that is used by OrcaBus.
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  * @param scope
@@ -42,7 +42,7 @@ exports.SHARED_SECURITY_GROUP_NAME = "OrcaBusSharedComputeSecurityGroup";
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  * Helper for looking up the shared compute security group by name.
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  */
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  class OrcaBusSharedComputeSecurityGroup {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.networking.OrcaBusSharedComputeSecurityGroup", version: "0.0.50" };
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  /**
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  * The shared security group that is used by compute resources to access the database.
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  * @param scope
@@ -11,7 +11,7 @@ exports.SLACK_ALERTS_SNS_TOPIC = "AwsChatBotTopic-alerts";
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  * A helper class to construct the arn for the slack SNS topic.
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  */
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  class SlackAlerts {
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- static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.49" };
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+ static [JSII_RTTI_SYMBOL_1] = { fqn: "@orcabus/platform-cdk-constructs.sharedConfig.slack.SlackAlerts", version: "0.0.50" };
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  /**
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  * Format the ARN for the slack alerts SNS topic for the current stack.
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  * @param stack