@optave/codegraph 3.9.6 → 3.11.0

package/README.md

@@ -428,7 +428,7 @@ A single trailing semicolon is ignored (falls back to single-query mode). The `-
 | `minilm` | all-MiniLM-L6-v2 | 384 | ~23 MB | Apache-2.0 | Fastest, good for quick iteration |
 | `jina-small` | jina-embeddings-v2-small-en | 512 | ~33 MB | Apache-2.0 | Better quality, still small |
 | `jina-base` | jina-embeddings-v2-base-en | 768 | ~137 MB | Apache-2.0 | High quality, 8192 token context |
-| `jina-code` | jina-embeddings-v2-base-code | 768 | ~137 MB | Apache-2.0 | Best for code search, trained on code+text (requires HF token) |
+| `jina-code` | jina-embeddings-v2-base-code | 768 | ~137 MB | Apache-2.0 | Best for code search, trained on code+text |
 | `nomic` | nomic-embed-text-v1 | 768 | ~137 MB | Apache-2.0 | Good quality, 8192 context |
 | `nomic-v1.5` (default) | nomic-embed-text-v1.5 | 768 | ~137 MB | Apache-2.0 | **Improved nomic, Matryoshka dimensions** |
 | `bge-large` | bge-large-en-v1.5 | 1024 | ~335 MB | MIT | Best general retrieval, top MTEB scores |
@@ -617,18 +617,18 @@ Codegraph also extracts symbols from common callback patterns: Commander `.comma
 
 Self-measured on every release via CI ([build benchmarks](generated/benchmarks/BUILD-BENCHMARKS.md) | [embedding benchmarks](generated/benchmarks/EMBEDDING-BENCHMARKS.md) | [query benchmarks](generated/benchmarks/QUERY-BENCHMARKS.md) | [incremental benchmarks](generated/benchmarks/INCREMENTAL-BENCHMARKS.md) | [resolution precision/recall](tests/benchmarks/resolution/)):
 
-*Last updated: v3.9.4 (2026-04-18)*
+*Last updated: v3.10.0 (2026-05-11)*
 
 | Metric | Native | WASM |
 |---|---|---|
-| Build speed | **3.2 ms/file** | **16.3 ms/file** |
-| Query time | **29ms** | **44ms** |
-| No-op rebuild | **10ms** | **21ms** |
-| 1-file rebuild | **400ms** | **64ms** |
-| Query: fn-deps | **2.5ms** | **2.2ms** |
-| Query: path | **2.4ms** | **2.2ms** |
-| ~50,000 files (est.) | **~160.0s build** | **~815.0s build** |
-| Resolution precision | **90.3%** | — |
+| Build speed | **4.8 ms/file** | **18.1 ms/file** |
+| Query time | **50ms** | **38ms** |
+| No-op rebuild | **24ms** | **15ms** |
+| 1-file rebuild | **67ms** | **51ms** |
+| Query: fn-deps | **2.2ms** | **2.1ms** |
+| Query: path | **2.3ms** | **2.1ms** |
+| ~50,000 files (est.) | **~240.0s build** | **~905.0s build** |
+| Resolution precision | **90.7%** | — |
 | Resolution recall | **42.9%** | — |
 
 Metrics are normalized per file for cross-version comparability. Times above are for a full initial build — incremental rebuilds only re-parse changed files.
@@ -638,7 +638,7 @@ Metrics are normalized per file for cross-version comparability. Times above are
 | Language | Precision | Recall | TP | FP | FN | Edges | Dynamic |
 |----------|----------:|-------:|---:|---:|---:|------:|--------:|
 | javascript | 100.0% | 66.7% | 12 | 0 | 6 | 18 | 14/28 |
-| typescript | 93.8% | 75.0% | 15 | 1 | 5 | 20 | — |
+| typescript | 100.0% | 75.0% | 15 | 0 | 5 | 20 | — |
 | bash | 100.0% | 100.0% | 12 | 0 | 0 | 12 | 0/1 |
 | c | 100.0% | 100.0% | 9 | 0 | 0 | 9 | — |
 | clojure | 80.0% | 26.7% | 4 | 1 | 11 | 15 | — |
@@ -773,7 +773,7 @@ Copy `.github/workflows/codegraph-impact.yml` to your repo, and every PR will ge
 
 ## 🛠️ Configuration
 
-Create a `.codegraphrc.json` in your project root to customize behavior:
+Create a `.codegraphrc.json` in your project root to customize behavior. The snippets below cover the most-used keys — see **[docs/guides/configuration.md](docs/guides/configuration.md)** for the full reference (every group, every key, every default).
 
 ```json
 {
@@ -833,6 +833,20 @@ The command is split on whitespace and executed with `execFileSync` (no shell in
 
 Works with any secret manager: 1Password CLI (`op`), Bitwarden (`bw`), `pass`, HashiCorp Vault, macOS Keychain (`security`), AWS Secrets Manager, etc.
 
+### MCP tool filtering
+
+Codegraph's MCP server exposes 30+ tools by default. For models with a small context window, you can shrink the schema by disabling tools you don't use:
+
+```json
+{
+  "mcp": {
+    "disabledTools": ["execution_flow", "sequence", "communities", "co_changes"]
+  }
+}
+```
+
+Names are matched case-insensitively and a leading `codegraph<digits>_` prefix (e.g. `codegraph2_module_map`) is stripped before comparison. Disabled tools are removed from `tools/list` and any `tools/call` invocation returns `Unknown tool: <name>`. See **[docs/guides/configuration.md#mcp-tool-filtering](docs/guides/configuration.md#mcp-tool-filtering)** for the full tool catalog, and the rest of that guide for every other config option.
+
 ## 📖 Programmatic API
 
 Codegraph also exports a full API for use in your own tools:

package/dist/ast-analysis/engine.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../../src/ast-analysis/engine.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AASH,OAAO,KAAK,EACV,YAAY,EACZ,cAAc,EAEd,qBAAqB,EAKrB,UAAU,EACV,eAAe,EAQhB,MAAM,aAAa,CAAC;AAysBrB,wBAAsB,WAAW,CAC/B,EAAE,EAAE,qBAAqB,EACzB,WAAW,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAAC,EACzC,OAAO,EAAE,MAAM,EACf,IAAI,EAAE,YAAY,EAClB,UAAU,CAAC,EAAE,UAAU,GACtB,OAAO,CAAC,cAAc,CAAC,CAoGzB"}

package/dist/ast-analysis/engine.js

@@ -283,7 +283,7 @@ async function ensureWasmTreesIfNeeded(fileSymbols, opts, rootDir) {
     if (needsWasmTrees) {
         try {
             const { ensureWasmTrees } = await getParserModule();
-            await ensureWasmTrees(fileSymbols, rootDir);
+            await ensureWasmTrees(fileSymbols, rootDir, (relPath, symbols) => fileNeedsWasmTree(relPath, symbols, flags));
         }
         catch (err) {
             debug(`ensureWasmTrees failed: ${toErrorMessage(err)}`);

package/dist/ast-analysis/engine.js.map

@@ -1 +1 @@
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package/dist/ast-analysis/rules/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/ast-analysis/rules/index.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACV,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,aAAa,EACd,MAAM,gBAAgB,CAAC;AAYxB,eAAO,MAAM,gBAAgB,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAWxD,CAAC;AAIH,eAAO,MAAM,cAAc,EAAE,GAAG,CAAC,MAAM,EAAE,aAAa,CAWpD,CAAC;AAIH,eAAO,MAAM,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,cAAc,CAWhD,CAAC;AAIH,eAAO,MAAM,cAAc,EAAE,GAAG,CAAC,MAAM,EAAE,mBAAmB,CAW1D,CAAC;AAkFH,eAAO,MAAM,aAAa,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAwB5D,CAAC;AASH,MAAM,WAAW,eAAe;IAC9B,UAAU,EAAE,MAAM,CAAC;IACnB,cAAc,EAAE,MAAM,CAAC;CACxB;AAuBD,eAAO,MAAM,kBAAkB,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAwB1D,CAAC;AAeH,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,MAAM,GAAG,WAAW,CAAC,MAAM,CAAC,CAKvE"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/ast-analysis/rules/index.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACV,cAAc,EACd,eAAe,EACf,mBAAmB,EACnB,aAAa,EACd,MAAM,gBAAgB,CAAC;AAYxB,eAAO,MAAM,gBAAgB,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAWxD,CAAC;AAIH,eAAO,MAAM,cAAc,EAAE,GAAG,CAAC,MAAM,EAAE,aAAa,CAWpD,CAAC;AAIH,eAAO,MAAM,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,cAAc,CAWhD,CAAC;AAIH,eAAO,MAAM,cAAc,EAAE,GAAG,CAAC,MAAM,EAAE,mBAAmB,CAW1D,CAAC;AAwIH,eAAO,MAAM,aAAa,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAmC5D,CAAC;AASH,MAAM,WAAW,eAAe;IAC9B,UAAU,EAAE,MAAM,CAAC;IACnB,cAAc,EAAE,MAAM,CAAC;CACxB;AAkCD,eAAO,MAAM,kBAAkB,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAmC1D,CAAC;AAeH,wBAAgB,mBAAmB,CAAC,MAAM,EAAE,MAAM,GAAG,WAAW,CAAC,MAAM,CAAC,CAKvE"}

package/dist/ast-analysis/rules/index.js

@@ -82,6 +82,10 @@ const CPP_AST_TYPES = {
     string_literal: 'string',
     raw_string_literal: 'string',
 };
+// CUDA's tree-sitter grammar inherits the full C++ node vocabulary, so the
+// AST node types and quote rules are identical to C++. Mirrors the native
+// `CUDA_AST_CONFIG` in `crates/codegraph-core/src/extractors/helpers.rs`.
+const CUDA_AST_TYPES = CPP_AST_TYPES;
 const KOTLIN_AST_TYPES = {
     throw_expression: 'throw',
     string_literal: 'string',
@@ -124,6 +128,46 @@ const HASKELL_AST_TYPES = {
 const OCAML_AST_TYPES = {
     string: 'string',
 };
+const FSHARP_AST_TYPES = {
+    string: 'string',
+};
+const OBJC_AST_TYPES = {
+    throw_statement: 'throw',
+    string_literal: 'string',
+};
+const GLEAM_AST_TYPES = {
+    string: 'string',
+};
+const JULIA_AST_TYPES = {
+    string_literal: 'string',
+    prefixed_string_literal: 'string',
+};
+const CLOJURE_AST_TYPES = {
+    str_lit: 'string',
+    regex_lit: 'regex',
+};
+const ERLANG_AST_TYPES = {
+    string: 'string',
+};
+const GROOVY_AST_TYPES = {
+    object_creation_expression: 'new',
+    throw_statement: 'throw',
+    string_literal: 'string',
+    // `gstring` listed defensively: tree-sitter-groovy 0.1.x emits `string_literal`
+    // for both single- and double-quoted strings, but some grammar variants use
+    // `gstring` for double-quoted / interpolated strings.
+    gstring: 'string',
+};
+const R_AST_TYPES = {
+    string: 'string',
+};
+const SOLIDITY_AST_TYPES = {
+    new_expression: 'new',
+    revert_statement: 'throw',
+    string_literal: 'string',
+    hex_string_literal: 'string',
+    unicode_string_literal: 'string',
+};
 export const AST_TYPE_MAPS = new Map([
     ['javascript', JS_AST_TYPES],
     ['typescript', JS_AST_TYPES],
@@ -137,6 +181,7 @@ export const AST_TYPE_MAPS = new Map([
     ['php', PHP_AST_TYPES],
     ['c', C_AST_TYPES],
     ['cpp', CPP_AST_TYPES],
+    ['cuda', CUDA_AST_TYPES],
     ['kotlin', KOTLIN_AST_TYPES],
     ['swift', SWIFT_AST_TYPES],
     ['scala', SCALA_AST_TYPES],
@@ -148,6 +193,16 @@ export const AST_TYPE_MAPS = new Map([
     ['haskell', HASKELL_AST_TYPES],
     ['ocaml', OCAML_AST_TYPES],
     ['ocaml-interface', OCAML_AST_TYPES],
+    ['fsharp', FSHARP_AST_TYPES],
+    ['fsharp-signature', FSHARP_AST_TYPES],
+    ['objc', OBJC_AST_TYPES],
+    ['gleam', GLEAM_AST_TYPES],
+    ['julia', JULIA_AST_TYPES],
+    ['clojure', CLOJURE_AST_TYPES],
+    ['erlang', ERLANG_AST_TYPES],
+    ['groovy', GROOVY_AST_TYPES],
+    ['r', R_AST_TYPES],
+    ['solidity', SOLIDITY_AST_TYPES],
 ]);
 const JS_STRING_CONFIG = { quoteChars: '\'"`', stringPrefixes: '' };
 const PY_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: 'rbfuRBFU' };
@@ -159,6 +214,8 @@ const RB_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: '' };
 const PHP_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: '' };
 const C_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
 const CPP_STRING_CONFIG = { quoteChars: '"', stringPrefixes: 'LuUR' };
+// CUDA shares C++ string-literal lexing, including the `L`/`u`/`U`/`R` prefixes.
+const CUDA_STRING_CONFIG = CPP_STRING_CONFIG;
 const KOTLIN_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
 const SWIFT_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
 const SCALA_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
@@ -169,6 +226,15 @@ const DART_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: '' };
 const ZIG_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
 const HASKELL_STRING_CONFIG = { quoteChars: '"\'', stringPrefixes: '' };
 const OCAML_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const FSHARP_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const OBJC_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const GLEAM_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const JULIA_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const CLOJURE_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const ERLANG_STRING_CONFIG = { quoteChars: '"', stringPrefixes: '' };
+const GROOVY_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: '' };
+const R_STRING_CONFIG = { quoteChars: '\'"', stringPrefixes: '' };
+const SOLIDITY_STRING_CONFIG = { quoteChars: '"\'', stringPrefixes: '' };
 export const AST_STRING_CONFIGS = new Map([
     ['javascript', JS_STRING_CONFIG],
     ['typescript', JS_STRING_CONFIG],
@@ -182,6 +248,7 @@ export const AST_STRING_CONFIGS = new Map([
     ['php', PHP_STRING_CONFIG],
     ['c', C_STRING_CONFIG],
     ['cpp', CPP_STRING_CONFIG],
+    ['cuda', CUDA_STRING_CONFIG],
     ['kotlin', KOTLIN_STRING_CONFIG],
     ['swift', SWIFT_STRING_CONFIG],
     ['scala', SCALA_STRING_CONFIG],
@@ -193,6 +260,16 @@ export const AST_STRING_CONFIGS = new Map([
     ['haskell', HASKELL_STRING_CONFIG],
     ['ocaml', OCAML_STRING_CONFIG],
     ['ocaml-interface', OCAML_STRING_CONFIG],
+    ['fsharp', FSHARP_STRING_CONFIG],
+    ['fsharp-signature', FSHARP_STRING_CONFIG],
+    ['objc', OBJC_STRING_CONFIG],
+    ['gleam', GLEAM_STRING_CONFIG],
+    ['julia', JULIA_STRING_CONFIG],
+    ['clojure', CLOJURE_STRING_CONFIG],
+    ['erlang', ERLANG_STRING_CONFIG],
+    ['groovy', GROOVY_STRING_CONFIG],
+    ['r', R_STRING_CONFIG],
+    ['solidity', SOLIDITY_STRING_CONFIG],
 ]);
 // ─── Per-language "stop-after-collect" kinds ─────────────────────────────
 //

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package/dist/ast-analysis/visitors/ast-store-visitor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ast-store-visitor.d.ts","sourceRoot":"","sources":["../../../src/ast-analysis/visitors/ast-store-visitor.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACV,UAAU,EAGV,OAAO,EAER,MAAM,gBAAgB,CAAC;AACxB,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAqJzD,wBAAgB,qBAAqB,CACnC,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,EAClC,IAAI,EAAE,UAAU,EAAE,EAClB,OAAO,EAAE,MAAM,EACf,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC9B,YAAY,GAAE,eAAuC,EACrD,gBAAgB,GAAE,WAAW,CAAC,MAAM,CAAa,GAChD,OAAO,CAmGT"}
+{"version":3,"file":"ast-store-visitor.d.ts","sourceRoot":"","sources":["../../../src/ast-analysis/visitors/ast-store-visitor.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACV,UAAU,EAGV,OAAO,EAER,MAAM,gBAAgB,CAAC;AACxB,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAgLzD,wBAAgB,qBAAqB,CACnC,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,EAClC,IAAI,EAAE,UAAU,EAAE,EAClB,OAAO,EAAE,MAAM,EACf,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC9B,YAAY,GAAE,eAAuC,EACrD,gBAAgB,GAAE,WAAW,CAAC,MAAM,CAAa,GAChD,OAAO,CA4GT"}

package/dist/ast-analysis/visitors/ast-store-visitor.js

@@ -117,6 +117,22 @@ function extractChildExpressionText(node) {
     }
     return truncate(node.text);
 }
+/**
+ * Count code points cheaply: skip the `[...s]` spread when `s.length` already
+ * decides the answer. Each code point is 1 or 2 UTF-16 units, so `.length < 2`
+ * implies `< 2` code points and `.length >= 3` already guarantees `>= 2` code
+ * points (worst case: one surrogate pair + one BMP char = 2 code points).
+ * Only `.length === 2` is genuinely ambiguous (could be a single surrogate
+ * pair = 1 code point, or two BMP chars = 2 code points) and needs the spread.
+ */
+function codePointCountAtLeast2(s) {
+    const len = s.length;
+    if (len < 2)
+        return false;
+    if (len >= 3)
+        return true;
+    return [...s].length >= 2;
+}
 /**
  * Extract string content from a string-literal node, mirroring the native
  * engine's `build_string_node` (`helpers.rs`). Returns `null` when the
@@ -127,25 +143,41 @@ function extractStringContent(node, cfg) {
     const isRawString = node.type.includes('raw_string');
     let s = raw;
     s = trimLeadingChars(s, '@');
-    s = trimLeadingChars(s, cfg.stringPrefixes);
+    if (cfg.stringPrefixes)
+        s = trimLeadingChars(s, cfg.stringPrefixes);
     if (isRawString)
         s = trimLeadingChars(s, 'r#');
     s = trimLeadingChars(s, cfg.quoteChars);
     if (isRawString)
         s = trimTrailingChars(s, '#');
     s = trimTrailingChars(s, cfg.quoteChars);
-    // Count code points, not UTF-16 code units — matches Rust `chars().count()`.
-    const codePointCount = [...s].length;
-    if (codePointCount < 2)
-        return null;
+    return codePointCountAtLeast2(s) ? s : null;
+}
+// Per-astTypeMap cache for the set of node-types that map to kind 'new'.
+// Computed once per unique astTypeMap reference (one per language) instead
+// of once per file.
+const _newTypesCache = new WeakMap();
+function newTypesFor(astTypeMap) {
+    let s = _newTypesCache.get(astTypeMap);
+    if (s)
+        return s;
+    s = new Set();
+    for (const type in astTypeMap) {
+        if (astTypeMap[type] === 'new')
+            s.add(type);
+    }
+    _newTypesCache.set(astTypeMap, s);
     return s;
 }
 export function createAstStoreVisitor(astTypeMap, defs, relPath, nodeIdMap, stringConfig = DEFAULT_STRING_CONFIG, stopRecurseKinds = new Set()) {
     const rows = [];
     const matched = new Set();
-    const newTypes = new Set(Object.entries(astTypeMap)
-        .filter(([, kind]) => kind === 'new')
-        .map(([type]) => type));
+    const newTypes = newTypesFor(astTypeMap);
+    // When nodeIdMap is empty, parentNodeId resolution is wasted work — the
+    // worker passes an empty map and the main thread re-resolves against its
+    // own DB-populated map in features/ast.ts::collectFileAstRows. Skip the
+    // findParentDef linear scan in that case.
+    const skipParentLookup = nodeIdMap.size === 0;
     function findParentDef(line) {
         let best = null;
         for (const def of defs) {
@@ -158,6 +190,8 @@ export function createAstStoreVisitor(astTypeMap, defs, relPath, nodeIdMap, stri
         return best;
     }
     function resolveParentNodeId(line) {
+        if (skipParentLookup)
+            return null;
         const parentDef = findParentDef(line);
         if (!parentDef)
             return null;
@@ -208,6 +242,14 @@ export function createAstStoreVisitor(astTypeMap, defs, relPath, nodeIdMap, stri
             // unrelated subtree. The parent call's skipChildren handles the intended case.
             if (matched.has(node.id))
                 return;
+            // Gate with `hasOwn` because plain-object lookup walks Object.prototype:
+            // tree-sitter node types like `constructor` (Haskell sum-types: Left,
+            // Right) would otherwise resolve to `Object.prototype.constructor` (the
+            // Object() function), which then crashes the worker boundary with
+            // "function Object() { [native code] } could not be cloned" when the
+            // resulting astNodes row is structured-cloned back to the main thread.
+            if (!Object.hasOwn(astTypeMap, node.type))
+                return;
             const kind = astTypeMap[node.type];
             if (!kind)
                 return;

package/dist/ast-analysis/visitors/ast-store-visitor.js.map

@@ -1 +1 @@
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package/dist/cli/commands/audit.js

@@ -15,7 +15,7 @@ export const command = {
         ['-T, --no-tests', 'Exclude test/spec files from results'],
         ['--include-tests', 'Include test/spec files (overrides excludeTests config)'],
         ['-j, --json', 'Output as JSON'],
-        ['--limit <number>', 'Max results to return (quick mode)'],
+        ['-n, --limit <number>', 'Max results to return (quick mode)'],
         ['--offset <number>', 'Skip N results (quick mode)'],
         ['--ndjson', 'Newline-delimited JSON output (quick mode)'],
     ],

package/dist/cli/commands/audit.js.map

@@ -1 +1 @@
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+{"version":3,"file":"audit.js","sourceRoot":"","sources":["../../../src/cli/commands/audit.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,KAAK,EAAE,MAAM,6BAA6B,CAAC;AACpD,OAAO,EAAE,OAAO,EAAE,MAAM,mCAAmC,CAAC;AAC5D,OAAO,EAAE,MAAM,EAAE,MAAM,sBAAsB,CAAC;AAG9C,MAAM,CAAC,MAAM,OAAO,GAAsB;IACxC,IAAI,EAAE,gBAAgB;IACtB,WAAW,EAAE,kEAAkE;IAC/E,OAAO,EAAE;QACP,CAAC,iBAAiB,EAAE,kBAAkB,CAAC;QACvC,CAAC,SAAS,EAAE,mEAAmE,CAAC;QAChF,CAAC,aAAa,EAAE,sBAAsB,EAAE,GAAG,CAAC;QAC5C,CAAC,mBAAmB,EAAE,2CAA2C,EAAE,WAAW,CAAC;QAC/E,CAAC,mBAAmB,EAAE,uBAAuB,CAAC;QAC9C,CAAC,gBAAgB,EAAE,sCAAsC,CAAC;QAC1D,CAAC,iBAAiB,EAAE,yDAAyD,CAAC;QAC9E,CAAC,YAAY,EAAE,gBAAgB,CAAC;QAChC,CAAC,sBAAsB,EAAE,oCAAoC,CAAC;QAC9D,CAAC,mBAAmB,EAAE,6BAA6B,CAAC;QACpD,CAAC,UAAU,EAAE,4CAA4C,CAAC;KAC3D;IACD,QAAQ,CAAC,CAAC,OAAO,CAAC,EAAE,IAAI;QACtB,IAAI,IAAI,CAAC,IAAI,IAAI,CAAE,iBAAuC,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;YAC/E,OAAO,iBAAiB,IAAI,CAAC,IAAI,aAAa,iBAAiB,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;QAC/E,CAAC;IACH,CAAC;IACD,OAAO,CAAC,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,GAAG;QACzB,MAAM,KAAK,GAAG,GAAG,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC;QACzC,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;YACf,OAAO,CAAC,MAAO,EAAE,IAAI,CAAC,EAAE,EAAE;gBACxB,KAAK,EAAE,QAAQ,CAAC,IAAI,CAAC,KAAe,EAAE,EAAE,CAAC;gBACzC,GAAG,KAAK;aACT,CAAC,CAAC;YACH,OAAO;QACT,CAAC;QACD,KAAK,CAAC,MAAO,EAAE,IAAI,CAAC,EAAE,EAAE;YACtB,KAAK,EAAE,QAAQ,CAAC,IAAI,CAAC,KAAe,EAAE,EAAE,CAAC;YACzC,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,IAAI,EAAE,KAAK,CAAC,IAAI;YAChB,MAAM;SACP,CAAC,CAAC;IACL,CAAC;CACF,CAAC"}

package/dist/cli/commands/build.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"build.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/build.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAErD,eAAO,MAAM,OAAO,EAAE,iBAsBrB,CAAC"}
+{"version":3,"file":"build.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/build.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,aAAa,CAAC;AAErD,eAAO,MAAM,OAAO,EAAE,iBAwBrB,CAAC"}

package/dist/cli/commands/build.js

@@ -4,6 +4,7 @@ export const command = {
     name: 'build [dir]',
     description: 'Parse repo and build graph in .codegraph/graph.db',
     options: [
+        ['-d, --db <path>', 'Path to graph.db (default: <dir>/.codegraph/graph.db)'],
         ['--no-incremental', 'Force full rebuild (ignore file hashes)'],
         ['--no-ast', 'Skip AST node extraction (calls, new, string, regex, throw, await)'],
         ['--no-complexity', 'Skip complexity metrics computation'],
@@ -20,6 +21,7 @@ export const command = {
             engine: engine,
             dataflow: opts.dataflow,
             cfg: opts.cfg,
+            dbPath: opts.db ? path.resolve(opts.db) : undefined,
         });
     },
 };

package/dist/cli/commands/build.js.map

@@ -1 +1 @@
-{"version":3,"file":"build.js","sourceRoot":"","sources":["../../../src/cli/commands/build.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAC7B,OAAO,EAAE,UAAU,EAAE,MAAM,+BAA+B,CAAC;AAI3D,MAAM,CAAC,MAAM,OAAO,GAAsB;IACxC,IAAI,EAAE,aAAa;IACnB,WAAW,EAAE,mDAAmD;IAChE,OAAO,EAAE;QACP,CAAC,kBAAkB,EAAE,yCAAyC,CAAC;QAC/D,CAAC,UAAU,EAAE,oEAAoE,CAAC;QAClF,CAAC,iBAAiB,EAAE,qCAAqC,CAAC;QAC1D,CAAC,eAAe,EAAE,gCAAgC,CAAC;QACnD,CAAC,UAAU,EAAE,kCAAkC,CAAC;KACjD;IACD,KAAK,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,EAAE,IAAI,EAAE,GAAG;QAC5B,MAAM,IAAI,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,IAAI,GAAG,CAAC,CAAC;QACtC,MAAM,MAAM,GAAG,GAAG,CAAC,OAAO,CAAC,IAAI,EAAE,CAAC,MAAM,CAAC;QACzC,MAAM,UAAU,CAAC,IAAI,EAAE;YACrB,WAAW,EAAE,IAAI,CAAC,WAAsB;YACxC,GAAG,EAAE,IAAI,CAAC,GAAc;YACxB,UAAU,EAAE,IAAI,CAAC,UAAqB;YACtC,MAAM,EAAE,MAAoB;YAC5B,QAAQ,EAAE,IAAI,CAAC,QAAmB;YAClC,GAAG,EAAE,IAAI,CAAC,GAAc;SACzB,CAAC,CAAC;IACL,CAAC;CACF,CAAC"}
+{"version":3,"file":"build.js","sourceRoot":"","sources":["../../../src/cli/commands/build.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAC7B,OAAO,EAAE,UAAU,EAAE,MAAM,+BAA+B,CAAC;AAI3D,MAAM,CAAC,MAAM,OAAO,GAAsB;IACxC,IAAI,EAAE,aAAa;IACnB,WAAW,EAAE,mDAAmD;IAChE,OAAO,EAAE;QACP,CAAC,iBAAiB,EAAE,uDAAuD,CAAC;QAC5E,CAAC,kBAAkB,EAAE,yCAAyC,CAAC;QAC/D,CAAC,UAAU,EAAE,oEAAoE,CAAC;QAClF,CAAC,iBAAiB,EAAE,qCAAqC,CAAC;QAC1D,CAAC,eAAe,EAAE,gCAAgC,CAAC;QACnD,CAAC,UAAU,EAAE,kCAAkC,CAAC;KACjD;IACD,KAAK,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,EAAE,IAAI,EAAE,GAAG;QAC5B,MAAM,IAAI,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,IAAI,GAAG,CAAC,CAAC;QACtC,MAAM,MAAM,GAAG,GAAG,CAAC,OAAO,CAAC,IAAI,EAAE,CAAC,MAAM,CAAC;QACzC,MAAM,UAAU,CAAC,IAAI,EAAE;YACrB,WAAW,EAAE,IAAI,CAAC,WAAsB;YACxC,GAAG,EAAE,IAAI,CAAC,GAAc;YACxB,UAAU,EAAE,IAAI,CAAC,UAAqB;YACtC,MAAM,EAAE,MAAoB;YAC5B,QAAQ,EAAE,IAAI,CAAC,QAAmB;YAClC,GAAG,EAAE,IAAI,CAAC,GAAc;YACxB,MAAM,EAAE,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAY,CAAC,CAAC,CAAC,CAAC,SAAS;SAC9D,CAAC,CAAC;IACL,CAAC;CACF,CAAC"}

package/dist/cli/commands/check.js

@@ -33,7 +33,7 @@ export const command = {
         ['-T, --no-tests', 'Exclude test/spec files from results'],
         ['--include-tests', 'Include test/spec files (overrides excludeTests config)'],
         ['-j, --json', 'Output as JSON'],
-        ['--limit <number>', 'Max results to return (manifesto mode)'],
+        ['-n, --limit <number>', 'Max results to return (manifesto mode)'],
         ['--offset <number>', 'Skip N results (manifesto mode)'],
         ['--ndjson', 'Newline-delimited JSON output (manifesto mode)'],
     ],

package/dist/cli/commands/check.js.map

@@ -1 +1 @@
-{"version":3,"file":"check.js","sourceRoot":"","sources":["../../../src/cli/commands/check.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,WAAW,EAAE,MAAM,wBAAwB,CAAC;AACrD,OAAO,EAAE,MAAM,EAAE,MAAM,sBAAsB,CAAC;AAG9C,SAAS,YAAY,CAAC,IAAiB;IACrC,IAAI,IAAI,IAAI,CAAE,iBAAuC,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;QACrE,MAAM,IAAI,WAAW,CAAC,iBAAiB,IAAI,aAAa,iBAAiB,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC1F,CAAC;AACH,CAAC;AAED,KAAK,UAAU,YAAY,CAAC,IAAiB,EAAE,KAAkB;IAC/D,YAAY,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACxB,MAAM,EAAE,SAAS,EAAE,GAAG,MAAM,MAAM,CAAC,iCAAiC,CAAC,CAAC;IACtE,SAAS,CAAC,IAAI,CAAC,EAAE,EAAE;QACjB,IAAI,EAAE,IAAI,CAAC,IAAI;QACf,IAAI,EAAE,IAAI,CAAC,IAAI;QACf,GAAG,KAAK;KACT,CAAC,CAAC;AACL,CAAC;AAED,MAAM,CAAC,MAAM,OAAO,GAAsB;IACxC,IAAI,EAAE,aAAa;IACnB,WAAW,EACT,gGAAgG;IAClG,OAAO,EAAE;QACP,CAAC,iBAAiB,EAAE,kBAAkB,CAAC;QACvC,CAAC,UAAU,EAAE,wBAAwB,CAAC;QACtC,CAAC,SAAS,EAAE,oDAAoD,CAAC;QACjE,CAAC,UAAU,EAAE,mDAAmD,CAAC;QACjE,CAAC,oBAAoB,EAAE,iDAAiD,CAAC;QACzE,CAAC,cAAc,EAAE,oDAAoD,CAAC;QACtE,CAAC,cAAc,EAAE,2CAA2C,CAAC;QAC7D,CAAC,aAAa,EAAE,6CAA6C,CAAC;QAC9D,CAAC,mBAAmB,EAAE,2DAA2D,EAAE,WAAW,CAAC;QAC/F,CAAC,mBAAmB,EAAE,wCAAwC,CAAC;QAC/D,CAAC,gBAAgB,EAAE,sCAAsC,CAAC;QAC1D,CAAC,iBAAiB,EAAE,yDAAyD,CAAC;QAC9E,CAAC,YAAY,EAAE,gBAAgB,CAAC;QAChC,CAAC,kBAAkB,EAAE,wCAAwC,CAAC;QAC9D,CAAC,mBAAmB,EAAE,iCAAiC,CAAC;QACxD,CAAC,UAAU,EAAE,gDAAgD,CAAC;KAC/D;IACD,KAAK,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,EAAE,IAAI,EAAE,GAAG;QAC5B,MAAM,UAAU,GAAG,GAAG,IAAI,IAAI,CAAC,MAAM,CAAC;QACtC,MAAM,KAAK,GAAG,GAAG,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC;QAEzC,IAAI,CAAC,UAAU,IAAI,CAAC,IAAI,CAAC,KAAK,EAAE,CAAC;YAC/B,MAAM,YAAY,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;YAChC,OAAO;QACT,CAAC;QAED,MAAM,EAAE,KAAK,EAAE,GAAG,MAAM,MAAM,CAAC,6BAA6B,CAAC,CAAC;QAC9D,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE;YACb,GAAG;YACH,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,MAAM,EAAE,IAAI,CAAC,MAAM,IAAI,SAAS;YAChC,WAAW,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,WAAqB,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACpF,UAAU,EAAE,IAAI,CAAC,UAAU,IAAI,SAAS;YACxC,UAAU,EAAE,IAAI,CAAC,UAAU,IAAI,SAAS;YACxC,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAe,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YAClE,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,IAAI,EAAE,KAAK,CAAC,IAAI;YAChB,MAAM;SACP,CAAC,CAAC;QAEH,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;YACf,MAAM,YAAY,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;QAClC,CAAC;IACH,CAAC;CACF,CAAC"}
+{"version":3,"file":"check.js","sourceRoot":"","sources":["../../../src/cli/commands/check.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,WAAW,EAAE,MAAM,wBAAwB,CAAC;AACrD,OAAO,EAAE,MAAM,EAAE,MAAM,sBAAsB,CAAC;AAG9C,SAAS,YAAY,CAAC,IAAiB;IACrC,IAAI,IAAI,IAAI,CAAE,iBAAuC,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;QACrE,MAAM,IAAI,WAAW,CAAC,iBAAiB,IAAI,aAAa,iBAAiB,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC1F,CAAC;AACH,CAAC;AAED,KAAK,UAAU,YAAY,CAAC,IAAiB,EAAE,KAAkB;IAC/D,YAAY,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACxB,MAAM,EAAE,SAAS,EAAE,GAAG,MAAM,MAAM,CAAC,iCAAiC,CAAC,CAAC;IACtE,SAAS,CAAC,IAAI,CAAC,EAAE,EAAE;QACjB,IAAI,EAAE,IAAI,CAAC,IAAI;QACf,IAAI,EAAE,IAAI,CAAC,IAAI;QACf,GAAG,KAAK;KACT,CAAC,CAAC;AACL,CAAC;AAED,MAAM,CAAC,MAAM,OAAO,GAAsB;IACxC,IAAI,EAAE,aAAa;IACnB,WAAW,EACT,gGAAgG;IAClG,OAAO,EAAE;QACP,CAAC,iBAAiB,EAAE,kBAAkB,CAAC;QACvC,CAAC,UAAU,EAAE,wBAAwB,CAAC;QACtC,CAAC,SAAS,EAAE,oDAAoD,CAAC;QACjE,CAAC,UAAU,EAAE,mDAAmD,CAAC;QACjE,CAAC,oBAAoB,EAAE,iDAAiD,CAAC;QACzE,CAAC,cAAc,EAAE,oDAAoD,CAAC;QACtE,CAAC,cAAc,EAAE,2CAA2C,CAAC;QAC7D,CAAC,aAAa,EAAE,6CAA6C,CAAC;QAC9D,CAAC,mBAAmB,EAAE,2DAA2D,EAAE,WAAW,CAAC;QAC/F,CAAC,mBAAmB,EAAE,wCAAwC,CAAC;QAC/D,CAAC,gBAAgB,EAAE,sCAAsC,CAAC;QAC1D,CAAC,iBAAiB,EAAE,yDAAyD,CAAC;QAC9E,CAAC,YAAY,EAAE,gBAAgB,CAAC;QAChC,CAAC,sBAAsB,EAAE,wCAAwC,CAAC;QAClE,CAAC,mBAAmB,EAAE,iCAAiC,CAAC;QACxD,CAAC,UAAU,EAAE,gDAAgD,CAAC;KAC/D;IACD,KAAK,CAAC,OAAO,CAAC,CAAC,GAAG,CAAC,EAAE,IAAI,EAAE,GAAG;QAC5B,MAAM,UAAU,GAAG,GAAG,IAAI,IAAI,CAAC,MAAM,CAAC;QACtC,MAAM,KAAK,GAAG,GAAG,CAAC,gBAAgB,CAAC,IAAI,CAAC,CAAC;QAEzC,IAAI,CAAC,UAAU,IAAI,CAAC,IAAI,CAAC,KAAK,EAAE,CAAC;YAC/B,MAAM,YAAY,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;YAChC,OAAO;QACT,CAAC;QAED,MAAM,EAAE,KAAK,EAAE,GAAG,MAAM,MAAM,CAAC,6BAA6B,CAAC,CAAC;QAC9D,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE;YACb,GAAG;YACH,MAAM,EAAE,IAAI,CAAC,MAAM;YACnB,MAAM,EAAE,IAAI,CAAC,MAAM,IAAI,SAAS;YAChC,WAAW,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,WAAqB,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACpF,UAAU,EAAE,IAAI,CAAC,UAAU,IAAI,SAAS;YACxC,UAAU,EAAE,IAAI,CAAC,UAAU,IAAI,SAAS;YACxC,KAAK,EAAE,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAe,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YAClE,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,IAAI,EAAE,KAAK,CAAC,IAAI;YAChB,MAAM;SACP,CAAC,CAAC;QAEH,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;YACf,MAAM,YAAY,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;QAClC,CAAC;IACH,CAAC;CACF,CAAC"}

package/dist/cli/commands/children.js

@@ -14,7 +14,7 @@ export const command = {
         ['-k, --kind <kind>', 'Filter to a specific symbol kind'],
         ['-T, --no-tests', 'Exclude test/spec files from results'],
         ['-j, --json', 'Output as JSON'],
-        ['--limit <number>', 'Max results to return'],
+        ['-n, --limit <number>', 'Max results to return'],
         ['--offset <number>', 'Skip N results (default: 0)'],
     ],
     validate([_name], opts) {