@optave/codegraph 3.2.0 → 3.3.0

package/dist/domain/parser.js.map

@@ -0,0 +1 @@
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package/dist/domain/queries.d.ts

@@ -0,0 +1,14 @@
+export { briefData } from "./analysis/brief.js";
+export { exportsData } from "./analysis/exports.js";
+export { rolesData } from "./analysis/roles.js";
+export { isTestFile, TEST_PATTERN } from "../infrastructure/test-filter.js";
+export { iterListFunctions, iterRoles, iterWhere } from "../shared/generators.js";
+export { ALL_SYMBOL_KINDS, CORE_EDGE_KINDS, CORE_SYMBOL_KINDS, EVERY_EDGE_KIND, EVERY_SYMBOL_KIND, EXTENDED_SYMBOL_KINDS, STRUCTURAL_EDGE_KINDS, VALID_ROLES } from "../shared/kinds.js";
+export { kindIcon, normalizeSymbol } from "../shared/normalize.js";
+export { contextData, explainData } from "./analysis/context.js";
+export { fileDepsData, fnDepsData, pathData } from "./analysis/dependencies.js";
+export { diffImpactData, diffImpactMermaid, fnImpactData, impactAnalysisData } from "./analysis/impact.js";
+export { implementationsData, interfacesData } from "./analysis/implementations.js";
+export { FALSE_POSITIVE_CALLER_THRESHOLD, FALSE_POSITIVE_NAMES, moduleMapData, statsData } from "./analysis/module-map.js";
+export { childrenData, findMatchingNodes, listFunctionsData, queryNameData, whereData } from "./analysis/symbol-lookup.js";
+//# sourceMappingURL=queries.d.ts.map

package/dist/domain/queries.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"queries.d.ts","sourceRoot":"","sources":["../../src/domain/queries.js"],"names":[],"mappings":""}

package/dist/domain/queries.js

@@ -0,0 +1,25 @@
+/**
+ * queries.js — Barrel re-export file.
+ *
+ * All query logic lives in the sub-modules under src/analysis/ and src/shared/.
+ * This file exists purely for backward compatibility so that all existing
+ * importers continue to work without changes.
+ */
+// ── Re-export from dedicated module for backward compat ───────────────────
+export { isTestFile, TEST_PATTERN } from '../infrastructure/test-filter.js';
+export { iterListFunctions, iterRoles, iterWhere } from '../shared/generators.js';
+// ── Kind/edge constants (canonical source: kinds.js) ─────────────────────
+export { ALL_SYMBOL_KINDS, CORE_EDGE_KINDS, CORE_SYMBOL_KINDS, EVERY_EDGE_KIND, EVERY_SYMBOL_KIND, EXTENDED_SYMBOL_KINDS, STRUCTURAL_EDGE_KINDS, VALID_ROLES, } from '../shared/kinds.js';
+// ── Shared utilities ─────────────────────────────────────────────────────
+export { kindIcon, normalizeSymbol } from '../shared/normalize.js';
+export { briefData } from './analysis/brief.js';
+export { contextData, explainData } from './analysis/context.js';
+export { fileDepsData, fnDepsData, pathData } from './analysis/dependencies.js';
+export { exportsData } from './analysis/exports.js';
+export { diffImpactData, diffImpactMermaid, fnImpactData, impactAnalysisData, } from './analysis/impact.js';
+export { implementationsData, interfacesData } from './analysis/implementations.js';
+export { FALSE_POSITIVE_CALLER_THRESHOLD, FALSE_POSITIVE_NAMES, moduleMapData, statsData, } from './analysis/module-map.js';
+export { rolesData } from './analysis/roles.js';
+// ── Analysis modules ─────────────────────────────────────────────────────
+export { childrenData, findMatchingNodes, listFunctionsData, queryNameData, whereData, } from './analysis/symbol-lookup.js';
+//# sourceMappingURL=queries.js.map

package/dist/domain/queries.js.map

@@ -0,0 +1 @@
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package/dist/domain/search/generator.d.ts

@@ -0,0 +1,17 @@
+/**
+ * Rough token estimate (~4 chars per token for code/English).
+ * Conservative — avoids adding a tokenizer dependency.
+ */
+export function estimateTokens(text: any): number;
+/**
+ * Build embeddings for all functions/methods/classes in the graph.
+ * @param {string} rootDir - Project root directory
+ * @param {string} modelKey - Model identifier from MODELS registry
+ * @param {string} [customDbPath] - Override path to graph.db
+ * @param {object} [options] - Embedding options
+ * @param {string} [options.strategy='structured'] - 'structured' (graph-enriched) or 'source' (raw code)
+ */
+export function buildEmbeddings(rootDir: string, modelKey: string, customDbPath?: string, options?: {
+    strategy?: string | undefined;
+}): Promise<void>;
+//# sourceMappingURL=generator.d.ts.map

package/dist/domain/search/generator.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"generator.d.ts","sourceRoot":"","sources":["../../../src/domain/search/generator.js"],"names":[],"mappings":"AASA;;;GAGG;AACH,kDAEC;AAiCD;;;;;;;GAOG;AACH,yCANW,MAAM,YACN,MAAM,iBACN,MAAM,YAEd;IAAyB,QAAQ;CACnC,iBA2GA"}

package/dist/domain/search/generator.js

@@ -0,0 +1,135 @@
+import fs from 'node:fs';
+import path from 'node:path';
+import { closeDb, findDbPath, openDb } from '../../db/index.js';
+import { warn } from '../../infrastructure/logger.js';
+import { DbError } from '../../shared/errors.js';
+import { embed, getModelConfig } from './models.js';
+import { buildSourceText } from './strategies/source.js';
+import { buildStructuredText } from './strategies/structured.js';
+/**
+ * Rough token estimate (~4 chars per token for code/English).
+ * Conservative — avoids adding a tokenizer dependency.
+ */
+export function estimateTokens(text) {
+    return Math.ceil(text.length / 4);
+}
+function initEmbeddingsSchema(db) {
+    db.exec(`
+    CREATE TABLE IF NOT EXISTS embeddings (
+      node_id INTEGER PRIMARY KEY,
+      vector BLOB NOT NULL,
+      text_preview TEXT,
+      FOREIGN KEY(node_id) REFERENCES nodes(id)
+    );
+    CREATE TABLE IF NOT EXISTS embedding_meta (
+      key TEXT PRIMARY KEY,
+      value TEXT
+    );
+  `);
+    // Add full_text column (idempotent — ignore if already exists)
+    try {
+        db.exec('ALTER TABLE embeddings ADD COLUMN full_text TEXT');
+    }
+    catch {
+        /* column already exists */
+    }
+    // FTS5 virtual table for BM25 keyword search
+    db.exec(`
+    CREATE VIRTUAL TABLE IF NOT EXISTS fts_index USING fts5(
+      name,
+      content,
+      tokenize='unicode61'
+    );
+  `);
+}
+/**
+ * Build embeddings for all functions/methods/classes in the graph.
+ * @param {string} rootDir - Project root directory
+ * @param {string} modelKey - Model identifier from MODELS registry
+ * @param {string} [customDbPath] - Override path to graph.db
+ * @param {object} [options] - Embedding options
+ * @param {string} [options.strategy='structured'] - 'structured' (graph-enriched) or 'source' (raw code)
+ */
+export async function buildEmbeddings(rootDir, modelKey, customDbPath, options = {}) {
+    const strategy = options.strategy || 'structured';
+    const dbPath = customDbPath || findDbPath(null);
+    if (!fs.existsSync(dbPath)) {
+        throw new DbError(`No codegraph database found at ${dbPath}.\nRun "codegraph build" first to analyze your codebase.`, { file: dbPath });
+    }
+    const db = openDb(dbPath);
+    initEmbeddingsSchema(db);
+    db.exec('DELETE FROM embeddings');
+    db.exec('DELETE FROM embedding_meta');
+    db.exec('DELETE FROM fts_index');
+    const nodes = db
+        .prepare(`SELECT * FROM nodes WHERE kind IN ('function', 'method', 'class') ORDER BY file, line`)
+        .all();
+    console.log(`Building embeddings for ${nodes.length} symbols (strategy: ${strategy})...`);
+    const byFile = new Map();
+    for (const node of nodes) {
+        if (!byFile.has(node.file))
+            byFile.set(node.file, []);
+        byFile.get(node.file).push(node);
+    }
+    const texts = [];
+    const nodeIds = [];
+    const nodeNames = [];
+    const previews = [];
+    const config = getModelConfig(modelKey);
+    const contextWindow = config.contextWindow;
+    let overflowCount = 0;
+    for (const [file, fileNodes] of byFile) {
+        const fullPath = path.join(rootDir, file);
+        let lines;
+        try {
+            lines = fs.readFileSync(fullPath, 'utf-8').split('\n');
+        }
+        catch (err) {
+            warn(`Cannot read ${file} for embeddings: ${err.message}`);
+            continue;
+        }
+        for (const node of fileNodes) {
+            let text = strategy === 'structured'
+                ? buildStructuredText(node, file, lines, db)
+                : buildSourceText(node, file, lines);
+            // Detect and handle context window overflow
+            const tokens = estimateTokens(text);
+            if (tokens > contextWindow) {
+                overflowCount++;
+                const maxChars = contextWindow * 4;
+                text = text.slice(0, maxChars);
+            }
+            texts.push(text);
+            nodeIds.push(node.id);
+            nodeNames.push(node.name);
+            previews.push(`${node.name} (${node.kind}) -- ${file}:${node.line}`);
+        }
+    }
+    if (overflowCount > 0) {
+        warn(`${overflowCount} symbol(s) exceeded model context window (${contextWindow} tokens) and were truncated`);
+    }
+    console.log(`Embedding ${texts.length} symbols...`);
+    const { vectors, dim } = await embed(texts, modelKey);
+    const insert = db.prepare('INSERT OR REPLACE INTO embeddings (node_id, vector, text_preview, full_text) VALUES (?, ?, ?, ?)');
+    const insertFts = db.prepare('INSERT INTO fts_index(rowid, name, content) VALUES (?, ?, ?)');
+    const insertMeta = db.prepare('INSERT OR REPLACE INTO embedding_meta (key, value) VALUES (?, ?)');
+    const insertAll = db.transaction(() => {
+        for (let i = 0; i < vectors.length; i++) {
+            insert.run(nodeIds[i], Buffer.from(vectors[i].buffer), previews[i], texts[i]);
+            insertFts.run(nodeIds[i], nodeNames[i], texts[i]);
+        }
+        insertMeta.run('model', config.name);
+        insertMeta.run('dim', String(dim));
+        insertMeta.run('count', String(vectors.length));
+        insertMeta.run('fts_count', String(vectors.length));
+        insertMeta.run('strategy', strategy);
+        insertMeta.run('built_at', new Date().toISOString());
+        if (overflowCount > 0) {
+            insertMeta.run('truncated_count', String(overflowCount));
+        }
+    });
+    insertAll();
+    console.log(`\nStored ${vectors.length} embeddings (${dim}d, ${config.name}, strategy: ${strategy}) in graph.db`);
+    closeDb(db);
+}
+//# sourceMappingURL=generator.js.map

package/dist/domain/search/generator.js.map

@@ -0,0 +1 @@
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package/dist/domain/search/index.d.ts

@@ -0,0 +1,8 @@
+export { search } from "./search/cli-formatter.js";
+export { hybridSearchData } from "./search/hybrid.js";
+export { ftsSearchData } from "./search/keyword.js";
+export { cosineSim } from "./stores/sqlite-blob.js";
+export { buildEmbeddings, estimateTokens } from "./generator.js";
+export { DEFAULT_MODEL, disposeModel, EMBEDDING_STRATEGIES, embed, MODELS } from "./models.js";
+export { multiSearchData, searchData } from "./search/semantic.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/domain/search/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/domain/search/index.js"],"names":[],"mappings":""}

package/dist/domain/search/index.js

@@ -0,0 +1,13 @@
+/**
+ * Embeddings subsystem — public API barrel.
+ *
+ * Re-exports everything consumers previously imported from `../embedder.js`.
+ */
+export { buildEmbeddings, estimateTokens } from './generator.js';
+export { DEFAULT_MODEL, disposeModel, EMBEDDING_STRATEGIES, embed, MODELS } from './models.js';
+export { search } from './search/cli-formatter.js';
+export { hybridSearchData } from './search/hybrid.js';
+export { ftsSearchData } from './search/keyword.js';
+export { multiSearchData, searchData } from './search/semantic.js';
+export { cosineSim } from './stores/sqlite-blob.js';
+//# sourceMappingURL=index.js.map

package/dist/domain/search/index.js.map

@@ -0,0 +1 @@
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package/dist/domain/search/models.d.ts

@@ -0,0 +1,82 @@
+/** @internal Used by generator.js — not part of the public barrel. */
+export function getModelConfig(modelKey: any): any;
+/**
+ * Prompt the user to install a missing package interactively.
+ * Returns true if the package was installed, false otherwise.
+ * Skips the prompt entirely in non-TTY environments (CI, piped stdin).
+ * @internal Not part of the public barrel.
+ */
+export function promptInstall(packageName: any): Promise<any>;
+/**
+ * Lazy-load @huggingface/transformers.
+ * If the package is missing, prompts the user to install it interactively.
+ * In non-TTY environments, prints an error and exits.
+ * @internal Not part of the public barrel.
+ */
+export function loadTransformers(): Promise<any>;
+/**
+ * Dispose the current ONNX session and free memory.
+ * Safe to call when no model is loaded (no-op).
+ */
+export function disposeModel(): Promise<void>;
+/**
+ * Generate embeddings for an array of texts.
+ */
+export function embed(texts: any, modelKey: any): Promise<{
+    vectors: Float32Array<any>[];
+    dim: any;
+}>;
+export const MODELS: {
+    minilm: {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    'jina-small': {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    'jina-base': {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    'jina-code': {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    nomic: {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    'nomic-v1.5': {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+    'bge-large': {
+        name: string;
+        dim: number;
+        contextWindow: number;
+        desc: string;
+        quantized: boolean;
+    };
+};
+export const EMBEDDING_STRATEGIES: string[];
+export const DEFAULT_MODEL: "nomic-v1.5";
+//# sourceMappingURL=models.d.ts.map

package/dist/domain/search/models.d.ts.map

@@ -0,0 +1 @@
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package/dist/domain/search/models.js

@@ -0,0 +1,198 @@
+import { execFileSync } from 'node:child_process';
+import { createInterface } from 'node:readline';
+import { info } from '../../infrastructure/logger.js';
+import { ConfigError, EngineError } from '../../shared/errors.js';
+// Lazy-load transformers (heavy, optional module)
+let pipeline = null;
+let extractor = null;
+let activeModel = null;
+export const MODELS = {
+    minilm: {
+        name: 'Xenova/all-MiniLM-L6-v2',
+        dim: 384,
+        contextWindow: 256,
+        desc: 'Smallest, fastest (~23MB). General text.',
+        quantized: true,
+    },
+    'jina-small': {
+        name: 'Xenova/jina-embeddings-v2-small-en',
+        dim: 512,
+        contextWindow: 8192,
+        desc: 'Small, good quality (~33MB). General text.',
+        quantized: false,
+    },
+    'jina-base': {
+        name: 'Xenova/jina-embeddings-v2-base-en',
+        dim: 768,
+        contextWindow: 8192,
+        desc: 'Good quality (~137MB). General text, 8192 token context.',
+        quantized: false,
+    },
+    'jina-code': {
+        name: 'Xenova/jina-embeddings-v2-base-code',
+        dim: 768,
+        contextWindow: 8192,
+        desc: 'Code-aware (~137MB). Trained on code+text, best for code search.',
+        quantized: false,
+    },
+    nomic: {
+        name: 'Xenova/nomic-embed-text-v1',
+        dim: 768,
+        contextWindow: 8192,
+        desc: 'Good local quality (~137MB). 8192 context.',
+        quantized: false,
+    },
+    'nomic-v1.5': {
+        name: 'nomic-ai/nomic-embed-text-v1.5',
+        dim: 768,
+        contextWindow: 8192,
+        desc: 'Improved nomic (~137MB). Matryoshka dimensions, 8192 context.',
+        quantized: false,
+    },
+    'bge-large': {
+        name: 'Xenova/bge-large-en-v1.5',
+        dim: 1024,
+        contextWindow: 512,
+        desc: 'Best general retrieval (~335MB). Top MTEB scores.',
+        quantized: false,
+    },
+};
+export const EMBEDDING_STRATEGIES = ['structured', 'source'];
+export const DEFAULT_MODEL = 'nomic-v1.5';
+const BATCH_SIZE_MAP = {
+    minilm: 32,
+    'jina-small': 16,
+    'jina-base': 8,
+    'jina-code': 8,
+    nomic: 8,
+    'nomic-v1.5': 8,
+    'bge-large': 4,
+};
+const DEFAULT_BATCH_SIZE = 32;
+/** @internal Used by generator.js — not part of the public barrel. */
+export function getModelConfig(modelKey) {
+    const key = modelKey || DEFAULT_MODEL;
+    const config = MODELS[key];
+    if (!config) {
+        throw new ConfigError(`Unknown model: ${key}. Available: ${Object.keys(MODELS).join(', ')}`);
+    }
+    return config;
+}
+/**
+ * Prompt the user to install a missing package interactively.
+ * Returns true if the package was installed, false otherwise.
+ * Skips the prompt entirely in non-TTY environments (CI, piped stdin).
+ * @internal Not part of the public barrel.
+ */
+export function promptInstall(packageName) {
+    if (!process.stdin.isTTY)
+        return Promise.resolve(false);
+    return new Promise((resolve) => {
+        const rl = createInterface({ input: process.stdin, output: process.stderr });
+        rl.question(`Semantic search requires ${packageName}. Install it now? [y/N] `, (answer) => {
+            rl.close();
+            if (answer.trim().toLowerCase() !== 'y')
+                return resolve(false);
+            try {
+                execFileSync('npm', ['install', packageName], {
+                    stdio: 'inherit',
+                    timeout: 300_000,
+                });
+                resolve(true);
+            }
+            catch {
+                resolve(false);
+            }
+        });
+    });
+}
+/**
+ * Lazy-load @huggingface/transformers.
+ * If the package is missing, prompts the user to install it interactively.
+ * In non-TTY environments, prints an error and exits.
+ * @internal Not part of the public barrel.
+ */
+export async function loadTransformers() {
+    try {
+        return await import('@huggingface/transformers');
+    }
+    catch {
+        const pkg = '@huggingface/transformers';
+        const installed = await promptInstall(pkg);
+        if (installed) {
+            try {
+                return await import(pkg);
+            }
+            catch (loadErr) {
+                throw new EngineError(`${pkg} was installed but failed to load. Please check your environment.`, { cause: loadErr });
+            }
+        }
+        throw new EngineError(`Semantic search requires ${pkg}.\nInstall it with: npm install ${pkg}`);
+    }
+}
+/**
+ * Dispose the current ONNX session and free memory.
+ * Safe to call when no model is loaded (no-op).
+ */
+export async function disposeModel() {
+    if (extractor) {
+        await extractor.dispose();
+        extractor = null;
+    }
+    activeModel = null;
+}
+async function loadModel(modelKey) {
+    const config = getModelConfig(modelKey);
+    if (extractor && activeModel === config.name)
+        return { extractor, config };
+    // Dispose previous model before loading a different one
+    await disposeModel();
+    const transformers = await loadTransformers();
+    pipeline = transformers.pipeline;
+    info(`Loading embedding model: ${config.name} (${config.dim}d)...`);
+    const pipelineOpts = config.quantized ? { quantized: true } : {};
+    try {
+        extractor = await pipeline('feature-extraction', config.name, pipelineOpts);
+    }
+    catch (err) {
+        const msg = err.message || String(err);
+        if (msg.includes('Unauthorized') || msg.includes('401') || msg.includes('gated')) {
+            throw new EngineError(`Model "${config.name}" requires authentication.\n` +
+                `This model is gated on HuggingFace and needs an access token.\n\n` +
+                `Options:\n` +
+                `  1. Set HF_TOKEN env var: export HF_TOKEN=hf_...\n` +
+                `  2. Use a public model instead: codegraph embed --model minilm`, { cause: err });
+        }
+        throw new EngineError(`Failed to load model "${config.name}": ${msg}\n` +
+            `Try a different model: codegraph embed --model minilm`, { cause: err });
+    }
+    activeModel = config.name;
+    info('Model loaded.');
+    return { extractor, config };
+}
+/**
+ * Generate embeddings for an array of texts.
+ */
+export async function embed(texts, modelKey) {
+    const { extractor: ext, config } = await loadModel(modelKey);
+    const dim = config.dim;
+    const results = [];
+    const batchSize = BATCH_SIZE_MAP[modelKey || DEFAULT_MODEL] || DEFAULT_BATCH_SIZE;
+    for (let i = 0; i < texts.length; i += batchSize) {
+        const batch = texts.slice(i, i + batchSize);
+        const output = await ext(batch, { pooling: 'mean', normalize: true });
+        for (let j = 0; j < batch.length; j++) {
+            const start = j * dim;
+            const vec = new Float32Array(dim);
+            for (let k = 0; k < dim; k++) {
+                vec[k] = output.data[start + k];
+            }
+            results.push(vec);
+        }
+        if (texts.length > batchSize) {
+            process.stdout.write(`  Embedded ${Math.min(i + batchSize, texts.length)}/${texts.length}\r`);
+        }
+    }
+    return { vectors: results, dim };
+}
+//# sourceMappingURL=models.js.map

package/dist/domain/search/models.js.map

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package/dist/domain/search/search/cli-formatter.d.ts

@@ -0,0 +1,6 @@
+/**
+ * Search with mode support — CLI wrapper with multi-query detection.
+ * Modes: 'hybrid' (default), 'semantic', 'keyword'
+ */
+export function search(query: any, customDbPath: any, opts?: {}): Promise<void>;
+//# sourceMappingURL=cli-formatter.d.ts.map

package/dist/domain/search/search/cli-formatter.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"cli-formatter.d.ts","sourceRoot":"","sources":["../../../../src/domain/search/search/cli-formatter.js"],"names":[],"mappings":"AAKA;;;GAGG;AACH,gFA6IC"}