@optave/codegraph 3.11.2 → 3.13.0

package/dist/infrastructure/native.js

@@ -5,10 +5,12 @@
  * crates/codegraph-core.  If unavailable the caller should fall back
  * to the existing WASM pipeline.
  */
+import { existsSync } from 'node:fs';
 import { createRequire } from 'node:module';
 import os from 'node:os';
+import { fileURLToPath } from 'node:url';
 import { EngineError, toErrorMessage } from '../shared/errors.js';
-import { debug } from './logger.js';
+import { debug, warn } from './logger.js';
 let _cached; // undefined = not yet tried, null = failed, NativeAddon = module
 let _loadError = null;
 const _require = createRequire(import.meta.url);
@@ -39,31 +41,98 @@ const PLATFORM_PACKAGES = {
     'darwin-x64': '@optave/codegraph-darwin-x64',
     'win32-x64': '@optave/codegraph-win32-x64-msvc',
 };
+/**
+ * Map of (platform-arch[-libc]) → locally compiled binary filename.
+ * Checked before the npm package so that locally compiled Rust changes
+ * are picked up immediately in development without publishing a new release.
+ */
+const PLATFORM_LOCAL_BINARIES = {
+    'linux-x64-gnu': 'codegraph-core.linux-x64-gnu.node',
+    'linux-x64-musl': 'codegraph-core.linux-x64-musl.node',
+    'linux-arm64-gnu': 'codegraph-core.linux-arm64-gnu.node',
+    'linux-arm64-musl': 'codegraph-core.linux-arm64-musl.node',
+    'darwin-arm64': 'codegraph-core.darwin-arm64.node',
+    'darwin-x64': 'codegraph-core.darwin-x64.node',
+    'win32-x64': 'codegraph-core.win32-x64-msvc.node',
+};
+/** Compute the platform key used to index PLATFORM_PACKAGES / PLATFORM_LOCAL_BINARIES. */
+function resolvePlatformKey() {
+    const platform = os.platform();
+    const arch = os.arch();
+    return platform === 'linux' ? `${platform}-${arch}-${detectLibc()}` : `${platform}-${arch}`;
+}
 /**
  * Resolve the platform-specific npm package name for the native addon.
  * Returns null if the current platform is not supported.
  */
 function resolvePlatformPackage() {
-    const platform = os.platform();
-    const arch = os.arch();
-    const key = platform === 'linux' ? `${platform}-${arch}-${detectLibc()}` : `${platform}-${arch}`;
-    return PLATFORM_PACKAGES[key] || null;
+    return PLATFORM_PACKAGES[resolvePlatformKey()] ?? null;
 }
 /**
  * Try to load the native napi addon.
  * Returns the module on success, null on failure.
+ *
+ * Load order:
+ *   1. NAPI_RS_NATIVE_LIBRARY_PATH env var (explicit override)
+ *   2. locally compiled binary in crates/codegraph-core/ (dev mode — preferred
+ *      over the npm package so that Rust changes are picked up immediately
+ *      without publishing a new release)
+ *   3. npm platform package (production path)
  */
 export function loadNative() {
     if (_cached !== undefined)
         return _cached;
+    const platformKey = resolvePlatformKey();
+    // 1. Explicit path override — highest priority. Failure is fatal: if the
+    //    operator set this variable, silently loading a different binary would
+    //    be harder to diagnose than an explicit error.
+    const envPath = process.env.NAPI_RS_NATIVE_LIBRARY_PATH;
+    if (envPath) {
+        try {
+            _cached = _require(envPath);
+            debug(`loadNative: loaded from NAPI_RS_NATIVE_LIBRARY_PATH: ${envPath}`);
+            return _cached;
+        }
+        catch (err) {
+            _loadError = err;
+            warn(`loadNative: NAPI_RS_NATIVE_LIBRARY_PATH is set but failed to load "${envPath}": ${toErrorMessage(err)}`);
+            _cached = null;
+            return null;
+        }
+    }
+    // 2. Locally compiled dev binary — preferred over npm package so that Rust
+    //    changes are visible without publishing. Only used when the file exists.
+    //    If the file exists but fails to load (e.g. stale ABI), we warn and halt
+    //    rather than silently falling through to the npm package — that would
+    //    defeat the purpose of this priority order.
+    const localFile = PLATFORM_LOCAL_BINARIES[platformKey];
+    if (localFile) {
+        const localPath = fileURLToPath(new URL(`../../crates/codegraph-core/${localFile}`, import.meta.url));
+        if (existsSync(localPath)) {
+            try {
+                _cached = _require(localPath);
+                debug(`loadNative: loaded local dev binary: ${localPath}`);
+                return _cached;
+            }
+            catch (err) {
+                _loadError = err;
+                warn(`loadNative: local dev binary exists but failed to load "${localPath}": ${toErrorMessage(err)}`);
+                _cached = null;
+                return null;
+            }
+        }
+    }
+    // 3. Published npm platform package — production path.
     const pkg = resolvePlatformPackage();
     if (pkg) {
         try {
             _cached = _require(pkg);
+            debug(`loadNative: loaded npm package: ${pkg}`);
             return _cached;
         }
         catch (err) {
             _loadError = err;
+            debug(`loadNative: npm package ${pkg} not available: ${toErrorMessage(err)}`);
         }
     }
     else {
@@ -81,6 +150,10 @@ export function isNativeAvailable() {
 /**
  * Read the version from the platform-specific npm package.json.
  * Returns null if the package is not installed or has no version.
+ *
+ * Note: always reports the npm package version. When the local dev binary or
+ * NAPI_RS_NATIVE_LIBRARY_PATH is loaded instead, this version may not match
+ * the running binary.
  */
 export function getNativePackageVersion() {
     const pkg = resolvePlatformPackage();

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package/dist/infrastructure/registry.d.ts

@@ -1,3 +1,4 @@
+import type { ConsentDecision } from '../types.js';
 export declare const REGISTRY_PATH: string;
 /** Default TTL: entries not accessed within 30 days are pruned. */
 export declare const DEFAULT_TTL_DAYS = 30;
@@ -7,8 +8,14 @@ interface RegistryEntry {
     addedAt: string;
     lastAccessedAt?: string;
 }
+interface UserConfigSection {
+    /** Per-repo consent decisions keyed by absolute repo path. */
+    consent: Record<string, ConsentDecision>;
+}
 interface Registry {
     repos: Record<string, RegistryEntry>;
+    /** User-level global config consent store — separate from MCP repo listings. */
+    userConfig?: UserConfigSection;
 }
 /**
  * Load the registry from disk.
@@ -44,6 +51,26 @@ export declare function listRepos(registryPath?: string): RepoListEntry[];
  * Returns undefined if the repo is not found or its DB file is missing.
  */
 export declare function resolveRepoDbPath(name: string, registryPath?: string): string | undefined;
+/**
+ * Read the per-repo consent decision for the global user config.
+ * Returns `undefined` when the repo is undecided (no recorded decision).
+ */
+export declare function getUserConfigConsent(rootDir: string, registryPath?: string): ConsentDecision | undefined;
+/**
+ * Persist a per-repo consent decision. Atomic write via temp+rename.
+ */
+export declare function setUserConfigConsent(rootDir: string, decision: ConsentDecision, registryPath?: string): void;
+/**
+ * List every repo with a recorded consent decision, sorted by path.
+ */
+export declare function listUserConfigConsent(registryPath?: string): Array<{
+    path: string;
+    decision: ConsentDecision;
+}>;
+/**
+ * Revert a repo to undecided state. Returns true if a decision was removed.
+ */
+export declare function clearUserConfigConsent(rootDir: string, registryPath?: string): boolean;
 interface PrunedEntry {
     name: string;
     path: string;

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package/dist/infrastructure/registry.js

@@ -119,6 +119,53 @@ export function resolveRepoDbPath(name, registryPath = REGISTRY_PATH) {
     saveRegistry(registry, registryPath);
     return entry.dbPath;
 }
+// ── User-config consent ────────────────────────────────────────────────
+/**
+ * Read the per-repo consent decision for the global user config.
+ * Returns `undefined` when the repo is undecided (no recorded decision).
+ */
+export function getUserConfigConsent(rootDir, registryPath = REGISTRY_PATH) {
+    const registry = loadRegistry(registryPath);
+    const absRoot = path.resolve(rootDir);
+    return registry.userConfig?.consent?.[absRoot];
+}
+/**
+ * Persist a per-repo consent decision. Atomic write via temp+rename.
+ */
+export function setUserConfigConsent(rootDir, decision, registryPath = REGISTRY_PATH) {
+    const registry = loadRegistry(registryPath);
+    const absRoot = path.resolve(rootDir);
+    if (!registry.userConfig)
+        registry.userConfig = { consent: {} };
+    if (!registry.userConfig.consent)
+        registry.userConfig.consent = {};
+    registry.userConfig.consent[absRoot] = decision;
+    saveRegistry(registry, registryPath);
+    debug(`User-config consent for "${absRoot}" set to "${decision}"`);
+}
+/**
+ * List every repo with a recorded consent decision, sorted by path.
+ */
+export function listUserConfigConsent(registryPath = REGISTRY_PATH) {
+    const registry = loadRegistry(registryPath);
+    const consent = registry.userConfig?.consent ?? {};
+    return Object.entries(consent)
+        .map(([p, decision]) => ({ path: p, decision }))
+        .sort((a, b) => a.path.localeCompare(b.path));
+}
+/**
+ * Revert a repo to undecided state. Returns true if a decision was removed.
+ */
+export function clearUserConfigConsent(rootDir, registryPath = REGISTRY_PATH) {
+    const registry = loadRegistry(registryPath);
+    const absRoot = path.resolve(rootDir);
+    const consent = registry.userConfig?.consent;
+    if (!consent || !(absRoot in consent))
+        return false;
+    delete consent[absRoot];
+    saveRegistry(registry, registryPath);
+    return true;
+}
 /**
  * Remove registry entries whose repo directory no longer exists on disk,
  * or that haven't been accessed within `ttlDays` days.
@@ -147,7 +194,18 @@ export function pruneRegistry(registryPath = REGISTRY_PATH, ttlDays = DEFAULT_TT
                 delete registry.repos[name];
         }
     }
-    if (!dryRun && pruned.length > 0) {
+    // Prune consent entries whose repo paths no longer exist on disk.
+    // Consent entries are TTL-exempt — only the missing-path rule applies.
+    let consentChanged = false;
+    if (!dryRun && registry.userConfig?.consent) {
+        for (const p of Object.keys(registry.userConfig.consent)) {
+            if (!fs.existsSync(p)) {
+                delete registry.userConfig.consent[p];
+                consentChanged = true;
+            }
+        }
+    }
+    if (!dryRun && (pruned.length > 0 || consentChanged)) {
         saveRegistry(registry, registryPath);
     }
     return pruned;

package/dist/infrastructure/registry.js.map

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package/dist/presentation/queries-cli/overview.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"overview.d.ts","sourceRoot":"","sources":["../../../src/presentation/queries-cli/overview.ts"],"names":[],"mappings":"AAMA,UAAU,UAAU;IAClB,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACrB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CACxB;AAwND,wBAAsB,KAAK,CAAC,YAAY,EAAE,MAAM,EAAE,IAAI,GAAE,UAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CAwBtF;AAED,wBAAgB,SAAS,CAAC,YAAY,EAAE,MAAM,EAAE,KAAK,SAAK,EAAE,IAAI,GAAE,UAAe,GAAG,IAAI,CAuBvF;AAsBD,wBAAgB,KAAK,CAAC,YAAY,EAAE,MAAM,EAAE,IAAI,GAAE,UAAe,GAAG,IAAI,CAqBvE"}
+{"version":3,"file":"overview.d.ts","sourceRoot":"","sources":["../../../src/presentation/queries-cli/overview.ts"],"names":[],"mappings":"AAMA,UAAU,UAAU;IAClB,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACrB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CACxB;AAsOD,wBAAsB,KAAK,CAAC,YAAY,EAAE,MAAM,EAAE,IAAI,GAAE,UAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CAwBtF;AAED,wBAAgB,SAAS,CAAC,YAAY,EAAE,MAAM,EAAE,KAAK,SAAK,EAAE,IAAI,GAAE,UAAe,GAAG,IAAI,CAuBvF;AAsBD,wBAAgB,KAAK,CAAC,YAAY,EAAE,MAAM,EAAE,IAAI,GAAE,UAAe,GAAG,IAAI,CAqBvE"}

package/dist/presentation/queries-cli/overview.js

@@ -56,6 +56,11 @@ function printQuality(data) {
         const cf = q.callConfidence;
         console.log(`\nGraph Quality: ${q.score}/100`);
         console.log(`  Caller coverage:  ${(cc.ratio * 100).toFixed(1)}% (${cc.covered}/${cc.total} functions have >=1 caller)`);
+        if (cc.byTechnique && Object.keys(cc.byTechnique).length > 0) {
+            const entries = Object.entries(cc.byTechnique).sort((a, b) => b[1] - a[1]);
+            const parts = entries.map(([k, v]) => `${k} ${v}`).join('  ');
+            console.log(`    by technique:  ${parts}`);
+        }
         console.log(`  Call confidence:  ${(cf.ratio * 100).toFixed(1)}% (${cf.highConf}/${cf.total} call edges are high-confidence)`);
         if (q.falsePositiveWarnings.length > 0) {
             console.log('  False-positive warnings:');

package/dist/presentation/queries-cli/overview.js.map

@@ -1 +1 @@
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package/dist/presentation/structure.d.ts

@@ -25,7 +25,7 @@ interface HotspotsResult {
     metric: string;
     level: string;
     limit: number;
-    hotspots: any[];
+    items: any[];
 }
 export declare function formatHotspots(data: HotspotsResult): string;
 interface ModuleBoundaryEntry {

package/dist/presentation/structure.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"structure.d.ts","sourceRoot":"","sources":["../../src/presentation/structure.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,YAAY,EAAE,oBAAoB,EAAE,aAAa,EAAE,MAAM,0BAA0B,CAAC;AAE7F,OAAO,EAAE,YAAY,EAAE,oBAAoB,EAAE,aAAa,EAAE,CAAC;AAE7D,UAAU,cAAc;IACtB,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,KAAK,CAAC;QACX,IAAI,EAAE,MAAM,CAAC;QACb,SAAS,EAAE,MAAM,CAAC;QAClB,WAAW,EAAE,MAAM,CAAC;QACpB,KAAK,EAAE,MAAM,CAAC;QACd,MAAM,EAAE,MAAM,CAAC;KAChB,CAAC,CAAC;CACJ;AAED,UAAU,eAAe;IACvB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,cAAc,EAAE,CAAC;IAC9B,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,wBAAgB,eAAe,CAAC,IAAI,EAAE,eAAe,GAAG,MAAM,CAsB7D;AAED,UAAU,cAAc;IACtB,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,GAAG,EAAE,CAAC;CACd;AAED,wBAAgB,cAAc,CAAC,IAAI,EAAE,cAAc,GAAG,MAAM,CAe3D;AAED,UAAU,mBAAmB;IAC3B,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED,UAAU,sBAAsB;IAC9B,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,mBAAmB,EAAE,CAAC;CAChC;AAED,wBAAgB,sBAAsB,CAAC,IAAI,EAAE,sBAAsB,GAAG,MAAM,CAiB3E"}

package/dist/presentation/structure.js

@@ -21,11 +21,11 @@ export function formatStructure(data) {
     return lines.join('\n');
 }
 export function formatHotspots(data) {
-    if (data.hotspots.length === 0)
+    if (data.items.length === 0)
         return 'No hotspots found. Run "codegraph build" first.';
     const lines = [`\nHotspots by ${data.metric} (${data.level}-level, top ${data.limit}):\n`];
     let rank = 1;
-    for (const h of data.hotspots) {
+    for (const h of data.items) {
         const extra = h.kind === 'directory'
             ? `${h.fileCount} files, cohesion=${h.cohesion !== null ? h.cohesion.toFixed(2) : 'n/a'}`
             : `${h.lineCount || 0}L, ${h.symbolCount || 0} symbols`;

package/dist/presentation/structure.js.map

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