@optave/codegraph 3.1.5 → 3.3.0

package/dist/infrastructure/config.js

@@ -0,0 +1,386 @@
+import { execFileSync } from 'node:child_process';
+import fs from 'node:fs';
+import path from 'node:path';
+import { debug, warn } from './logger.js';
+export const CONFIG_FILES = ['.codegraphrc.json', '.codegraphrc', 'codegraph.config.json'];
+export const DEFAULTS = {
+    include: [],
+    exclude: [],
+    ignoreDirs: [],
+    extensions: [],
+    aliases: {},
+    build: {
+        incremental: true,
+        dbPath: '.codegraph/graph.db',
+        driftThreshold: 0.2,
+    },
+    query: {
+        defaultDepth: 3,
+        defaultLimit: 20,
+        excludeTests: false,
+    },
+    embeddings: { model: 'nomic-v1.5', llmProvider: null },
+    llm: { provider: null, model: null, baseUrl: null, apiKey: null, apiKeyCommand: null },
+    search: { defaultMinScore: 0.2, rrfK: 60, topK: 15, similarityWarnThreshold: 0.85 },
+    ci: { failOnCycles: false, impactThreshold: null },
+    manifesto: {
+        rules: {
+            cognitive: { warn: 15 },
+            cyclomatic: { warn: 10 },
+            maxNesting: { warn: 4 },
+            maintainabilityIndex: { warn: 20, fail: null },
+            importCount: { warn: null, fail: null },
+            exportCount: { warn: null, fail: null },
+            lineCount: { warn: null, fail: null },
+            fanIn: { warn: null, fail: null },
+            fanOut: { warn: null, fail: null },
+            noCycles: { warn: null, fail: null },
+            boundaries: { warn: null, fail: null },
+        },
+        boundaries: null,
+    },
+    check: {
+        cycles: true,
+        blastRadius: null,
+        signatures: true,
+        boundaries: true,
+        depth: 3,
+    },
+    coChange: {
+        since: '1 year ago',
+        minSupport: 3,
+        minJaccard: 0.3,
+        maxFilesPerCommit: 50,
+    },
+    analysis: {
+        impactDepth: 3,
+        fnImpactDepth: 5,
+        auditDepth: 3,
+        sequenceDepth: 10,
+        falsePositiveCallers: 20,
+        briefCallerDepth: 5,
+        briefImporterDepth: 5,
+        briefHighRiskCallers: 10,
+        briefMediumRiskCallers: 3,
+    },
+    community: {
+        resolution: 1.0,
+    },
+    structure: {
+        cohesionThreshold: 0.3,
+    },
+    risk: {
+        weights: {
+            fanIn: 0.25,
+            complexity: 0.3,
+            churn: 0.2,
+            role: 0.15,
+            mi: 0.1,
+        },
+        roleWeights: {
+            core: 1.0,
+            utility: 0.9,
+            entry: 0.8,
+            adapter: 0.5,
+            leaf: 0.2,
+            'test-only': 0.1,
+            dead: 0.1,
+            'dead-leaf': 0.0,
+            'dead-entry': 0.3,
+            'dead-ffi': 0.05,
+            'dead-unresolved': 0.15,
+        },
+        defaultRoleWeight: 0.5,
+    },
+    display: {
+        maxColWidth: 40,
+        excerptLines: 50,
+        summaryMaxChars: 100,
+        jsdocEndScanLines: 10,
+        jsdocOpenScanLines: 20,
+        signatureGatherLines: 5,
+    },
+    mcp: {
+        defaults: {
+            list_functions: 100,
+            query: 10,
+            where: 50,
+            node_roles: 100,
+            export_graph: 500,
+            fn_impact: 5,
+            context: 5,
+            explain: 10,
+            file_deps: 20,
+            file_exports: 20,
+            diff_impact: 30,
+            impact_analysis: 20,
+            semantic_search: 20,
+            execution_flow: 50,
+            hotspots: 20,
+            co_changes: 20,
+            complexity: 30,
+            manifesto: 50,
+            communities: 20,
+            structure: 30,
+            triage: 20,
+            ast_query: 50,
+        },
+    },
+};
+/**
+ * Load project configuration from a .codegraphrc.json or similar file.
+ * Returns merged config with defaults.
+ */
+export function loadConfig(cwd) {
+    cwd = cwd || process.cwd();
+    for (const name of CONFIG_FILES) {
+        const filePath = path.join(cwd, name);
+        if (fs.existsSync(filePath)) {
+            try {
+                const raw = fs.readFileSync(filePath, 'utf-8');
+                const config = JSON.parse(raw);
+                debug(`Loaded config from ${filePath}`);
+                const merged = mergeConfig(DEFAULTS, config);
+                if ('excludeTests' in config && !(config.query && 'excludeTests' in config.query)) {
+                    merged.query.excludeTests = Boolean(config.excludeTests);
+                }
+                delete merged.excludeTests;
+                return resolveSecrets(applyEnvOverrides(merged));
+            }
+            catch (err) {
+                debug(`Failed to parse config ${filePath}: ${err.message}`);
+            }
+        }
+    }
+    return resolveSecrets(applyEnvOverrides({ ...DEFAULTS }));
+}
+const ENV_LLM_MAP = {
+    CODEGRAPH_LLM_PROVIDER: 'provider',
+    CODEGRAPH_LLM_API_KEY: 'apiKey',
+    CODEGRAPH_LLM_MODEL: 'model',
+};
+export function applyEnvOverrides(config) {
+    for (const [envKey, field] of Object.entries(ENV_LLM_MAP)) {
+        if (process.env[envKey] !== undefined) {
+            config.llm[field] = process.env[envKey];
+        }
+    }
+    return config;
+}
+export function resolveSecrets(config) {
+    const cmd = config.llm.apiKeyCommand;
+    if (typeof cmd !== 'string' || cmd.trim() === '')
+        return config;
+    const parts = cmd.trim().split(/\s+/);
+    const [executable, ...args] = parts;
+    try {
+        const result = execFileSync(executable, args, {
+            encoding: 'utf-8',
+            timeout: 10_000,
+            maxBuffer: 64 * 1024,
+            stdio: ['ignore', 'pipe', 'pipe'],
+        }).trim();
+        if (result) {
+            config.llm.apiKey = result;
+        }
+    }
+    catch (err) {
+        warn(`apiKeyCommand failed: ${err.message}`);
+    }
+    return config;
+}
+// ── Monorepo workspace detection ─────────────────────────────────────
+/**
+ * Expand a workspace glob pattern into matching directories.
+ * Supports trailing `/*` or `/**` patterns (e.g. "packages/*").
+ * Does not depend on an external glob library — uses fs.readdirSync.
+ */
+function expandWorkspaceGlob(pattern, rootDir) {
+    // Strip trailing /*, /**, or just *
+    const clean = pattern.replace(/\/?\*\*?$/, '');
+    const baseDir = path.resolve(rootDir, clean);
+    if (!fs.existsSync(baseDir))
+        return [];
+    try {
+        const entries = fs.readdirSync(baseDir, { withFileTypes: true });
+        return entries
+            .filter((e) => e.isDirectory())
+            .map((e) => path.join(baseDir, e.name))
+            .filter((d) => fs.existsSync(path.join(d, 'package.json')));
+    }
+    catch {
+        return [];
+    }
+}
+/**
+ * Read a package.json and return its name field, or null.
+ */
+function readPackageName(pkgDir) {
+    try {
+        const raw = fs.readFileSync(path.join(pkgDir, 'package.json'), 'utf-8');
+        const pkg = JSON.parse(raw);
+        return pkg.name || null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Resolve the entry-point source file for a workspace package.
+ * Checks exports → main → index file fallback.
+ */
+function resolveWorkspaceEntry(pkgDir) {
+    try {
+        const raw = fs.readFileSync(path.join(pkgDir, 'package.json'), 'utf-8');
+        const pkg = JSON.parse(raw);
+        // Try "source" field first (common in monorepos for pre-built packages)
+        if (pkg.source) {
+            const s = path.resolve(pkgDir, pkg.source);
+            if (fs.existsSync(s))
+                return s;
+        }
+        // Try "main" field
+        if (pkg.main) {
+            const m = path.resolve(pkgDir, pkg.main);
+            if (fs.existsSync(m))
+                return m;
+        }
+        // Index file fallback
+        for (const idx of [
+            'index.ts',
+            'index.tsx',
+            'index.js',
+            'index.mjs',
+            'src/index.ts',
+            'src/index.tsx',
+            'src/index.js',
+        ]) {
+            const candidate = path.resolve(pkgDir, idx);
+            if (fs.existsSync(candidate))
+                return candidate;
+        }
+    }
+    catch {
+        /* ignore */
+    }
+    return null;
+}
+/**
+ * Detect monorepo workspace packages from workspace configuration files.
+ *
+ * Checks (in order):
+ *   1. pnpm-workspace.yaml — `packages:` array
+ *   2. package.json — `workspaces` field (npm/yarn)
+ *   3. lerna.json — `packages` array
+ *
+ * @param {string} rootDir - Project root directory
+ * @returns {Map<string, { dir: string, entry: string|null }>}
+ *   Map of package name → { absolute dir, resolved entry file }
+ */
+export function detectWorkspaces(rootDir) {
+    const workspaces = new Map();
+    const patterns = [];
+    // 1. pnpm-workspace.yaml
+    const pnpmPath = path.join(rootDir, 'pnpm-workspace.yaml');
+    if (fs.existsSync(pnpmPath)) {
+        try {
+            const raw = fs.readFileSync(pnpmPath, 'utf-8');
+            // Simple YAML parse for `packages:` array — no dependency needed
+            const packagesMatch = raw.match(/^packages:\s*\n((?:\s+-\s+.+\n?)*)/m);
+            if (packagesMatch) {
+                const lines = packagesMatch[1].match(/^\s+-\s+['"]?([^'"#\n]+)['"]?\s*$/gm);
+                if (lines) {
+                    for (const line of lines) {
+                        const m = line.match(/^\s+-\s+['"]?([^'"#\n]+?)['"]?\s*$/);
+                        if (m)
+                            patterns.push(m[1].trim());
+                    }
+                }
+            }
+        }
+        catch {
+            /* ignore */
+        }
+    }
+    // 2. package.json workspaces (npm/yarn)
+    if (patterns.length === 0) {
+        const rootPkgPath = path.join(rootDir, 'package.json');
+        if (fs.existsSync(rootPkgPath)) {
+            try {
+                const raw = fs.readFileSync(rootPkgPath, 'utf-8');
+                const pkg = JSON.parse(raw);
+                const ws = pkg.workspaces;
+                if (Array.isArray(ws)) {
+                    patterns.push(...ws);
+                }
+                else if (ws && Array.isArray(ws.packages)) {
+                    // Yarn classic format: { packages: [...], nohoist: [...] }
+                    patterns.push(...ws.packages);
+                }
+            }
+            catch {
+                /* ignore */
+            }
+        }
+    }
+    // 3. lerna.json
+    if (patterns.length === 0) {
+        const lernaPath = path.join(rootDir, 'lerna.json');
+        if (fs.existsSync(lernaPath)) {
+            try {
+                const raw = fs.readFileSync(lernaPath, 'utf-8');
+                const lerna = JSON.parse(raw);
+                if (Array.isArray(lerna.packages)) {
+                    patterns.push(...lerna.packages);
+                }
+            }
+            catch {
+                /* ignore */
+            }
+        }
+    }
+    if (patterns.length === 0)
+        return workspaces;
+    // Expand glob patterns and collect packages
+    for (const pattern of patterns) {
+        // Check if pattern is a direct path (no glob) or a glob
+        if (pattern.includes('*')) {
+            for (const dir of expandWorkspaceGlob(pattern, rootDir)) {
+                const name = readPackageName(dir);
+                if (name)
+                    workspaces.set(name, { dir, entry: resolveWorkspaceEntry(dir) });
+            }
+        }
+        else {
+            // Direct path like "packages/core"
+            const dir = path.resolve(rootDir, pattern);
+            if (fs.existsSync(path.join(dir, 'package.json'))) {
+                const name = readPackageName(dir);
+                if (name)
+                    workspaces.set(name, { dir, entry: resolveWorkspaceEntry(dir) });
+            }
+        }
+    }
+    if (workspaces.size > 0) {
+        debug(`Detected ${workspaces.size} workspace packages: ${[...workspaces.keys()].join(', ')}`);
+    }
+    return workspaces;
+}
+export function mergeConfig(defaults, overrides) {
+    const result = { ...defaults };
+    for (const [key, value] of Object.entries(overrides)) {
+        if (value &&
+            typeof value === 'object' &&
+            !Array.isArray(value) &&
+            defaults[key] &&
+            typeof defaults[key] === 'object' &&
+            !Array.isArray(defaults[key])) {
+            result[key] = mergeConfig(defaults[key], value);
+        }
+        else {
+            result[key] = value;
+        }
+    }
+    return result;
+}
+//# sourceMappingURL=config.js.map

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package/dist/infrastructure/logger.d.ts

@@ -0,0 +1,7 @@
+export function setVerbose(v: any): void;
+export function isVerbose(): boolean;
+export function warn(msg: any): void;
+export function debug(msg: any): void;
+export function info(msg: any): void;
+export function error(msg: any): void;
+//# sourceMappingURL=logger.d.ts.map

package/dist/infrastructure/logger.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"logger.d.ts","sourceRoot":"","sources":["../../src/infrastructure/logger.js"],"names":[],"mappings":"AAEA,yCAEC;AACD,qCAEC;AAED,qCAEC;AAED,sCAEC;AAED,qCAEC;AAED,sCAEC"}

package/dist/infrastructure/logger.js

@@ -0,0 +1,21 @@
+let verbose = false;
+export function setVerbose(v) {
+    verbose = v;
+}
+export function isVerbose() {
+    return verbose;
+}
+export function warn(msg) {
+    process.stderr.write(`[codegraph WARN] ${msg}\n`);
+}
+export function debug(msg) {
+    if (verbose)
+        process.stderr.write(`[codegraph DEBUG] ${msg}\n`);
+}
+export function info(msg) {
+    process.stderr.write(`[codegraph] ${msg}\n`);
+}
+export function error(msg) {
+    process.stderr.write(`[codegraph ERROR] ${msg}\n`);
+}
+//# sourceMappingURL=logger.js.map

package/dist/infrastructure/logger.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"logger.js","sourceRoot":"","sources":["../../src/infrastructure/logger.js"],"names":[],"mappings":"AAAA,IAAI,OAAO,GAAG,KAAK,CAAC;AAEpB,MAAM,UAAU,UAAU,CAAC,CAAC;IAC1B,OAAO,GAAG,CAAC,CAAC;AACd,CAAC;AACD,MAAM,UAAU,SAAS;IACvB,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,MAAM,UAAU,IAAI,CAAC,GAAG;IACtB,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,oBAAoB,GAAG,IAAI,CAAC,CAAC;AACpD,CAAC;AAED,MAAM,UAAU,KAAK,CAAC,GAAG;IACvB,IAAI,OAAO;QAAE,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,qBAAqB,GAAG,IAAI,CAAC,CAAC;AAClE,CAAC;AAED,MAAM,UAAU,IAAI,CAAC,GAAG;IACtB,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,eAAe,GAAG,IAAI,CAAC,CAAC;AAC/C,CAAC;AAED,MAAM,UAAU,KAAK,CAAC,GAAG;IACvB,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,qBAAqB,GAAG,IAAI,CAAC,CAAC;AACrD,CAAC"}

package/dist/infrastructure/native.d.ts

@@ -0,0 +1,19 @@
+/**
+ * Try to load the native napi addon.
+ * Returns the module on success, null on failure.
+ */
+export function loadNative(): any;
+/**
+ * Check whether the native engine is available on this platform.
+ */
+export function isNativeAvailable(): boolean;
+/**
+ * Read the version from the platform-specific npm package.json.
+ * Returns null if the package is not installed or has no version.
+ */
+export function getNativePackageVersion(): any;
+/**
+ * Return the native module or throw if not available.
+ */
+export function getNative(): any;
+//# sourceMappingURL=native.d.ts.map

package/dist/infrastructure/native.d.ts.map

@@ -0,0 +1 @@
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package/dist/infrastructure/native.js

@@ -0,0 +1,105 @@
+/**
+ * Native addon loader with graceful fallback to WASM.
+ *
+ * Tries to load the platform-specific napi-rs binary built from
+ * crates/codegraph-core.  If unavailable the caller should fall back
+ * to the existing WASM pipeline.
+ */
+import { createRequire } from 'node:module';
+import os from 'node:os';
+import { EngineError } from '../shared/errors.js';
+let _cached; // undefined = not yet tried, null = failed, object = module
+let _loadError = null;
+const _require = createRequire(import.meta.url);
+/**
+ * Detect whether the current Linux environment uses glibc or musl.
+ * Returns 'gnu' for glibc, 'musl' for musl, 'gnu' as fallback.
+ */
+function detectLibc() {
+    try {
+        const { readdirSync } = _require('node:fs');
+        const files = readdirSync('/lib');
+        if (files.some((f) => f.startsWith('ld-musl-') && f.endsWith('.so.1'))) {
+            return 'musl';
+        }
+    }
+    catch { }
+    return 'gnu';
+}
+/** Map of (platform-arch[-libc]) → npm package name. */
+const PLATFORM_PACKAGES = {
+    'linux-x64-gnu': '@optave/codegraph-linux-x64-gnu',
+    'linux-x64-musl': '@optave/codegraph-linux-x64-musl',
+    'linux-arm64-gnu': '@optave/codegraph-linux-arm64-gnu',
+    'linux-arm64-musl': '@optave/codegraph-linux-arm64-musl', // not yet published — placeholder for future CI target
+    'darwin-arm64': '@optave/codegraph-darwin-arm64',
+    'darwin-x64': '@optave/codegraph-darwin-x64',
+    'win32-x64': '@optave/codegraph-win32-x64-msvc',
+};
+/**
+ * Resolve the platform-specific npm package name for the native addon.
+ * Returns null if the current platform is not supported.
+ */
+function resolvePlatformPackage() {
+    const platform = os.platform();
+    const arch = os.arch();
+    const key = platform === 'linux' ? `${platform}-${arch}-${detectLibc()}` : `${platform}-${arch}`;
+    return PLATFORM_PACKAGES[key] || null;
+}
+/**
+ * Try to load the native napi addon.
+ * Returns the module on success, null on failure.
+ */
+export function loadNative() {
+    if (_cached !== undefined)
+        return _cached;
+    const pkg = resolvePlatformPackage();
+    if (pkg) {
+        try {
+            _cached = _require(pkg);
+            return _cached;
+        }
+        catch (err) {
+            _loadError = err;
+        }
+    }
+    else {
+        _loadError = new Error(`Unsupported platform: ${os.platform()}-${os.arch()}`);
+    }
+    _cached = null;
+    return null;
+}
+/**
+ * Check whether the native engine is available on this platform.
+ */
+export function isNativeAvailable() {
+    return loadNative() !== null;
+}
+/**
+ * Read the version from the platform-specific npm package.json.
+ * Returns null if the package is not installed or has no version.
+ */
+export function getNativePackageVersion() {
+    const pkg = resolvePlatformPackage();
+    if (!pkg)
+        return null;
+    try {
+        const pkgJson = _require(`${pkg}/package.json`);
+        return pkgJson.version || null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Return the native module or throw if not available.
+ */
+export function getNative() {
+    const mod = loadNative();
+    if (!mod) {
+        throw new EngineError(`Native codegraph-core not available: ${_loadError?.message || 'unknown error'}. ` +
+            'Install the platform package or use --engine wasm.', { cause: _loadError });
+    }
+    return mod;
+}
+//# sourceMappingURL=native.js.map

package/dist/infrastructure/native.js.map

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package/dist/infrastructure/registry.d.ts

@@ -0,0 +1,57 @@
+/**
+ * Load the registry from disk.
+ * Returns `{ repos: {} }` on missing or corrupt file.
+ */
+export function loadRegistry(registryPath?: string): any;
+/**
+ * Persist the registry to disk (atomic write via temp + rename).
+ * Creates the parent directory if needed.
+ */
+export function saveRegistry(registry: any, registryPath?: string): void;
+/**
+ * Register a project directory. Idempotent.
+ * Name defaults to `path.basename(rootDir)`.
+ *
+ * When no explicit name is provided and the basename already exists
+ * pointing to a different path, auto-suffixes (`api` → `api-2`, `api-3`, …).
+ * Re-registering the same path updates in place. Explicit names always overwrite.
+ */
+export function registerRepo(rootDir: any, name: any, registryPath?: string): {
+    name: any;
+    entry: any;
+};
+/**
+ * Remove a repo from the registry. Returns false if not found.
+ */
+export function unregisterRepo(name: any, registryPath?: string): boolean;
+/**
+ * List all registered repos, sorted by name.
+ */
+export function listRepos(registryPath?: string): {
+    name: string;
+    path: any;
+    dbPath: any;
+    addedAt: any;
+    lastAccessedAt: any;
+}[];
+/**
+ * Resolve a repo name to its database path.
+ * Returns undefined if the repo is not found or its DB file is missing.
+ */
+export function resolveRepoDbPath(name: any, registryPath?: string): any;
+/**
+ * Remove registry entries whose repo directory no longer exists on disk,
+ * or that haven't been accessed within `ttlDays` days.
+ * Returns an array of `{ name, path, reason }` for each pruned entry.
+ *
+ * When `dryRun` is true, entries are identified but not removed from disk.
+ */
+export function pruneRegistry(registryPath?: string, ttlDays?: number, excludeNames?: any[], dryRun?: boolean): {
+    name: string;
+    path: any;
+    reason: string;
+}[];
+export const REGISTRY_PATH: string;
+/** Default TTL: entries not accessed within 30 days are pruned. */
+export const DEFAULT_TTL_DAYS: 30;
+//# sourceMappingURL=registry.d.ts.map

package/dist/infrastructure/registry.d.ts.map

@@ -0,0 +1 @@
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