@opentrons/shared-data 0.1.2-alpha.0 → 0.1.2-alpha.1

package/js/types.ts

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+import {
+  MAGDECK,
+  TEMPDECK,
+  THERMOCYCLER,
+  MAGNETIC_MODULE_V1,
+  MAGNETIC_MODULE_V2,
+  TEMPERATURE_MODULE_V1,
+  TEMPERATURE_MODULE_V2,
+  THERMOCYCLER_MODULE_V1,
+  THERMOCYCLER_MODULE_V2,
+  HEATERSHAKER_MODULE_V1,
+  MAGNETIC_MODULE_TYPE,
+  TEMPERATURE_MODULE_TYPE,
+  THERMOCYCLER_MODULE_TYPE,
+  HEATERSHAKER_MODULE_TYPE,
+  MAGNETIC_BLOCK_TYPE,
+  GEN1,
+  GEN2,
+  FLEX,
+  LEFT,
+  RIGHT,
+  GRIPPER_V1,
+  GRIPPER_V1_1,
+  GRIPPER_V1_2,
+  EXTENSION,
+  MAGNETIC_BLOCK_V1,
+} from './constants'
+import type { RunTimeCommand, LabwareLocation } from '../command/types'
+import type { AddressableAreaName, CutoutFixtureId, CutoutId } from '../deck'
+import type { PipetteName } from './pipettes'
+
+export type RobotType = 'OT-2 Standard' | 'OT-3 Standard'
+
+export interface RobotDefinition {
+  displayName: string
+  robotType: RobotType
+  models: string[]
+}
+
+// TODO Ian 2019-06-04 split this out into eg ../labware/flowTypes/labwareV1.js
+export interface WellDefinition {
+  diameter?: number
+  // NOTE: presence of diameter indicates a circular well
+  depth?: number
+  // TODO Ian 2018-03-12: depth should be required, but is missing in MALDI-plate
+  height: number
+  length: number
+  width: number
+  x: number
+  y: number
+  z: number
+  'total-liquid-volume': number
+}
+
+// typedef for labware definitions under v1 labware schema
+export interface LabwareDefinition1 {
+  metadata: {
+    name: string
+    format: string
+    deprecated?: boolean
+    displayName?: string
+    displayCategory?: string
+    isValidSource?: boolean
+    isTiprack?: boolean
+    tipVolume?: number
+  }
+  ordering: string[][]
+  wells: {
+    [well: string]: WellDefinition
+  }
+}
+
+// TODO(mc, 2019-05-29): Remove this enum in favor of string + exported
+// constants + unit tests to catch typos in our definitions. Make changes
+// here and in shared-data/labware/schemas/2.json
+export type LabwareDisplayCategory =
+  | 'wellPlate'
+  | 'tipRack'
+  | 'tubeRack'
+  | 'reservoir'
+  | 'aluminumBlock'
+  | 'trash'
+  | 'other'
+  | 'adapter'
+
+export type LabwareVolumeUnits = 'µL' | 'mL' | 'L'
+
+// TODO(mc, 2019-05-29): Remove this enum in favor of string + exported
+// constants + unit tests to catch typos in our definitions. Make changes
+// here and in shared-data/labware/schemas/2.json
+export type WellBottomShape = 'flat' | 'u' | 'v'
+
+export interface LabwareMetadata {
+  displayName: string
+  displayCategory: LabwareDisplayCategory
+  displayVolumeUnits: LabwareVolumeUnits
+  tags?: string[]
+}
+
+export interface LabwareDimensions {
+  xDimension: number
+  yDimension: number
+  zDimension: number
+}
+
+export interface Coordinates {
+  x: number
+  y: number
+  z: number
+}
+export type LabwareOffset = Coordinates
+
+// 1. Valid pipette type for a container (i.e. is there multi channel access?)
+// 2. Is the container a tiprack?
+export interface LabwareParameters {
+  loadName: string
+  format: string
+  isTiprack: boolean
+  tipLength?: number
+  isMagneticModuleCompatible: boolean
+  magneticModuleEngageHeight?: number
+  quirks?: string[]
+}
+
+export interface LabwareBrand {
+  brand: string
+  brandId?: string[]
+  links?: string[]
+}
+
+export interface CircularWellShapeProperties {
+  shape: 'circular'
+  diameter: number
+}
+export interface RectangularWellShapeProperties {
+  shape: 'rectangular'
+  xDimension: number
+  yDimension: number
+}
+
+export type LabwareWellShapeProperties =
+  | CircularWellShapeProperties
+  | RectangularWellShapeProperties
+
+// well without x,y,z
+export type LabwareWellProperties = LabwareWellShapeProperties & {
+  depth: number
+  totalLiquidVolume: number
+}
+
+export type LabwareWell = LabwareWellProperties & {
+  x: number
+  y: number
+  z: number
+}
+
+// TODO(mc, 2019-03-21): exact object is tough to use with the initial value in
+// reduce, so leaving this inexact (e.g. `const a: {||} = {}` errors)
+export type LabwareWellMap = Record<string, LabwareWell>
+
+export interface LabwareWellGroupMetadata {
+  displayName?: string
+  displayCategory?: LabwareDisplayCategory
+  wellBottomShape?: WellBottomShape
+}
+
+export interface LabwareWellGroup {
+  wells: string[]
+  metadata: LabwareWellGroupMetadata
+  brand?: LabwareBrand
+}
+
+export type LabwareRoles = 'labware' | 'adapter' | 'fixture' | 'maintenance'
+
+// NOTE: must be synced with shared-data/labware/schemas/2.json
+export interface LabwareDefinition2 {
+  version: number
+  schemaVersion: 2
+  namespace: string
+  metadata: LabwareMetadata
+  dimensions: LabwareDimensions
+  cornerOffsetFromSlot: LabwareOffset
+  parameters: LabwareParameters
+  brand: LabwareBrand
+  ordering: string[][]
+  wells: LabwareWellMap
+  groups: LabwareWellGroup[]
+  allowedRoles?: LabwareRoles[]
+}
+
+export type ModuleType =
+  | typeof MAGNETIC_MODULE_TYPE
+  | typeof TEMPERATURE_MODULE_TYPE
+  | typeof THERMOCYCLER_MODULE_TYPE
+  | typeof HEATERSHAKER_MODULE_TYPE
+  | typeof MAGNETIC_BLOCK_TYPE
+
+// ModuleModel corresponds to top-level keys in shared-data/module/definitions/2
+export type MagneticModuleModel =
+  | typeof MAGNETIC_MODULE_V1
+  | typeof MAGNETIC_MODULE_V2
+
+export type TemperatureModuleModel =
+  | typeof TEMPERATURE_MODULE_V1
+  | typeof TEMPERATURE_MODULE_V2
+
+export type ThermocyclerModuleModel =
+  | typeof THERMOCYCLER_MODULE_V1
+  | typeof THERMOCYCLER_MODULE_V2
+
+export type HeaterShakerModuleModel = typeof HEATERSHAKER_MODULE_V1
+
+export type MagneticBlockModel = typeof MAGNETIC_BLOCK_V1
+
+export type ModuleModel =
+  | MagneticModuleModel
+  | TemperatureModuleModel
+  | ThermocyclerModuleModel
+  | HeaterShakerModuleModel
+  | MagneticBlockModel
+
+export type GripperModel =
+  | typeof GRIPPER_V1
+  | typeof GRIPPER_V1_1
+  | typeof GRIPPER_V1_2
+
+export type ModuleModelWithLegacy =
+  | ModuleModel
+  | typeof THERMOCYCLER
+  | typeof MAGDECK
+  | typeof TEMPDECK
+
+export interface Dimensions {
+  xDimension: number
+  yDimension: number
+  zDimension: number
+}
+
+export interface DeckRobot {
+  model: RobotType
+}
+
+export type CoordinateTuple = [number, number, number]
+
+export type UnitDirection = 1 | -1
+
+export type UnitVectorTuple = [UnitDirection, UnitDirection, UnitDirection]
+
+export type DeckSlotId = string
+
+export interface DeckSlot {
+  id: DeckSlotId
+  position: CoordinateTuple
+  matingSurfaceUnitVector?: UnitVectorTuple
+  boundingBox: Dimensions
+  displayName: string
+  compatibleModules: ModuleType[]
+}
+
+export interface DeckCalibrationPoint {
+  id: string
+  position: CoordinateTuple
+  displayName: string
+}
+
+export interface CutoutFixture {
+  id: CutoutFixtureId
+  mayMountTo: CutoutId[]
+  displayName: string
+  providesAddressableAreas: Record<CutoutId, AddressableAreaName[]>
+  height: number
+}
+
+type AreaType =
+  | 'slot'
+  | 'movableTrash'
+  | 'wasteChute'
+  | 'fixedTrash'
+  | 'stagingSlot'
+
+export interface AddressableArea {
+  id: AddressableAreaName
+  areaType: AreaType
+  offsetFromCutoutFixture: CoordinateTuple
+  boundingBox: Dimensions
+  displayName: string
+  compatibleModuleTypes: ModuleType[]
+  ableToDropLabware?: boolean
+  ableToDropTips?: boolean
+  matingSurfaceUnitVector?: UnitVectorTuple
+}
+
+export interface DeckMetadata {
+  displayName: string
+  tags: string[]
+}
+
+export interface DeckCutout {
+  id: CutoutId
+  position: CoordinateTuple
+  displayName: string
+}
+
+export interface LegacyFixture {
+  id: string
+  slot: string
+  labware: string
+  displayName: string
+}
+
+export interface DeckLocations {
+  addressableAreas: AddressableArea[]
+  calibrationPoints: DeckCalibrationPoint[]
+  cutouts: DeckCutout[]
+  legacyFixtures: LegacyFixture[]
+}
+
+export interface DeckDefinition {
+  otId: string
+  cornerOffsetFromOrigin: CoordinateTuple
+  dimensions: CoordinateTuple
+  robot: DeckRobot
+  locations: DeckLocations
+  metadata: DeckMetadata
+  cutoutFixtures: CutoutFixture[]
+}
+
+export interface ModuleDimensions {
+  bareOverallHeight: number
+  overLabwareHeight: number
+  xDimension: number
+  yDimension: number
+  footprintXDimension?: number
+  footprintYDimension?: number
+  labwareInterfaceXDimension?: number
+  labwareInterfaceYDimension?: number
+  lidHeight?: number
+}
+
+export interface ModuleCalibrationPoint {
+  x: number
+  y: number
+  z?: number
+}
+
+export interface ModuleLayer {
+  name: string
+  pathDValues: string[]
+}
+
+// module definition that adheres to the v3 module json schema
+export interface ModuleDefinition {
+  moduleType: ModuleType
+  model: ModuleModel
+  labwareOffset: Coordinates
+  dimensions: ModuleDimensions
+  cornerOffsetFromSlot: Coordinates
+  calibrationPoint: ModuleCalibrationPoint
+  displayName: string
+  quirks: string[]
+  slotTransforms: SlotTransforms
+  compatibleWith: ModuleModel[]
+  twoDimensionalRendering: any // deprecated SVGson INode use Module SVG Components instead
+}
+
+export type AffineTransformMatrix = number[][]
+
+export interface SlotTransforms {
+  [deckOtId: string]: {
+    [slotId: string]: {
+      [transformKey in keyof ModuleDefinition]?: AffineTransformMatrix
+    }
+  }
+}
+
+export type ModuleOrientation = 'left' | 'right'
+
+export type PipetteChannels = 1 | 8 | 96
+
+export type PipetteDisplayCategory = typeof GEN1 | typeof GEN2 | typeof FLEX
+
+export type PipetteMount = typeof LEFT | typeof RIGHT
+export type GantryMount = typeof LEFT | typeof RIGHT | typeof EXTENSION
+export interface FlowRateSpec {
+  value: number
+  min: number
+  max: number
+}
+
+export interface PipetteNameSpecs {
+  name: string
+  displayName: string
+  displayCategory: PipetteDisplayCategory
+  minVolume: number
+  maxVolume: number
+  channels: PipetteChannels
+  defaultAspirateFlowRate: FlowRateSpec
+  defaultDispenseFlowRate: FlowRateSpec
+  defaultBlowOutFlowRate: FlowRateSpec
+  defaultTipracks: string[]
+  smoothieConfigs?: {
+    stepsPerMM: number
+    homePosition: number
+    travelDistance: number
+  }
+}
+
+// TODO(bc, 2021-05-27): the type of `model` here should be PipetteModel
+// TODO(mc, 2019-10-14): update this type according to the schema
+export interface PipetteModelSpecs extends PipetteNameSpecs {
+  model: string
+  backCompatNames?: string[]
+  tipLength: {
+    value: number
+  }
+}
+export interface ProtocolMetadata {
+  protocolName?: string
+  author?: string
+  description?: string | null
+  created?: number
+  lastModified?: number | null
+  category?: string | null
+  subcategory?: string | null
+  tags?: string[]
+  [key: string]: unknown
+}
+export interface PendingProtocolAnalysis {
+  id: string
+  status?: 'pending'
+}
+export interface ProtocolAnalysisSummary {
+  id: string
+  status: 'pending' | 'completed'
+}
+export interface LoadedPipette {
+  id: string
+  pipetteName: PipetteName
+  mount: 'left' | 'right'
+}
+export interface LoadedLabware {
+  id: string
+  loadName: string
+  definitionUri: string
+  location: LabwareLocation
+  offsetId?: string
+  displayName?: string
+}
+export interface LoadedModule {
+  id: string
+  model: ModuleModel
+  location: {
+    slotName: string
+  }
+  serialNumber: string
+}
+export interface Liquid {
+  id: string
+  displayName: string
+  description: string
+  displayColor?: string
+}
+
+export interface AnalysisError {
+  id: string
+  detail: string
+  errorType: string
+  createdAt: string
+}
+
+// TODO(BC, 10/25/2023): this type (and others in this file) probably belong in api-client, not here
+export interface CompletedProtocolAnalysis {
+  id: string
+  status?: 'completed'
+  result: 'ok' | 'not-ok' | 'error'
+  pipettes: LoadedPipette[]
+  labware: LoadedLabware[]
+  modules: LoadedModule[]
+  liquids: Liquid[]
+  commands: RunTimeCommand[]
+  errors: AnalysisError[]
+  robotType?: RobotType | null
+}
+
+export interface ResourceFile {
+  name: string
+  role: string
+}
+export interface ProtocolResource {
+  id: string
+  createdAt: string
+  protocolType: 'json' | 'python'
+  robotType: RobotType
+  metadata: ProtocolMetadata
+  analysisSummaries: ProtocolAnalysisSummary[]
+  files: ResourceFile[]
+  key?: string
+}
+
+export interface ProtocolAnalysesResource {
+  analyses: Array<PendingProtocolAnalysis | CompletedProtocolAnalysis>
+}
+export type MotorAxis =
+  | 'x'
+  | 'y'
+  | 'leftZ'
+  | 'rightZ'
+  | 'leftPlunger'
+  | 'rightPlunger'
+  | 'extensionZ'
+  | 'extensionJaw'
+
+export type MotorAxes = MotorAxis[]
+
+export type ThermalAdapterName =
+  | 'PCR Adapter'
+  | 'Deep Well Adapter'
+  | '96 Flat Bottom Adapter'
+  | 'Universal Flat Adapter'
+
+// gripper definition that adheres to the v1 gripper json schema
+export interface GripperDefinition {
+  $otSharedSchema: string
+  model: GripperModel
+  schemaVersion: number
+  displayName: string
+  zMotorConfigurations: { idle: number; run: number }
+  jawMotorConfigurations: { vref: number }
+  gripForceProfile: {
+    polynomial: [[number, number], [number, number]]
+    defaultGripForce: number
+    defaultHomeForce: number
+    defaultIdleForce: number
+    min: number
+    max: number
+  }
+  geometry: {
+    baseOffsetFromMount: [number, number, number]
+    jawCenterOffsetFromBase: [number, number, number]
+    pinOneOffsetFromBase: [number, number, number]
+    pinTwoOffsetFromBase: [number, number, number]
+    jawWidth: { min: number; max: number }
+    maxAllowedGripError: number
+  }
+}
+
+export type StatusBarAnimation =
+  | 'idle'
+  | 'confirm'
+  | 'updating'
+  | 'disco'
+  | 'off'
+
+export type StatusBarAnimations = StatusBarAnimation[]
+
+export interface CutoutConfig {
+  cutoutId: CutoutId
+  cutoutFixtureId: CutoutFixtureId | null
+}
+
+export type DeckConfiguration = CutoutConfig[]

package/lib/js/__tests__/deckSchemas.test.d.ts

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+export {};

package/lib/js/__tests__/getAreSlotsAdjacent.test.d.ts

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+export {};

package/lib/js/__tests__/getWellNamePerMultiTip.test.d.ts

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+export {};

package/lib/js/__tests__/labwareDefQuirks.test.d.ts

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+export {};

package/lib/js/__tests__/labwareDefSchemaV1.test.d.ts

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+export {};

package/lib/js/__tests__/labwareDefSchemaV2.test.d.ts

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+export {};

package/lib/js/__tests__/moduleAccessors.test.d.ts

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+export {};

package/lib/js/__tests__/moduleSpecsSchema.test.d.ts

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+export {};

package/lib/js/__tests__/pipetteSchemaV2.test.d.ts

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+export {};

package/lib/js/__tests__/pipetteSpecSchemas.test.d.ts

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+export {};

package/lib/js/__tests__/pipettes.test.d.ts

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+export {};

package/lib/js/__tests__/protocolSchemaV4.test.d.ts

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+export {};

package/lib/js/__tests__/protocolSchemaV5.test.d.ts

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+export {};

package/lib/js/__tests__/protocolSchemaV6.test.d.ts

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+export {};

package/lib/js/__tests__/protocolSchemaV7.test.d.ts

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+export {};

package/lib/js/__tests__/protocolValidation.test.d.ts

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+export {};

package/lib/js/__tests__/sortWells.test.d.ts

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+export {};

package/lib/js/__tests__/splitWellsOnColumn.test.d.ts

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+export {};