@openneuro/server 4.20.4 → 4.20.6-alpha.2

package/src/libs/doi/{index.js → index.ts}

@@ -1,5 +1,5 @@
-import request from 'superagent'
-import config from '../../config'
+import request from "superagent"
+import config from "../../config"
 
 export const template = ({
   doi,
@@ -7,13 +7,18 @@ export const template = ({
   title,
   year,
   resourceType,
-}) => `<?xml version="1.0" encoding="UTF-8"?>
+}) =>
+  `<?xml version="1.0" encoding="UTF-8"?>
 <resource xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://datacite.org/schema/kernel-4" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4/metadata.xsd">
   <identifier identifierType="DOI">${doi}</identifier>
   <creators>
-  ${creators
-    .map(creator => `<creator><creatorName>${creator}</creatorName></creator>`)
-    .join('')}
+  ${
+    creators
+      .map((creator) =>
+        `<creator><creatorName>${creator}</creatorName></creator>`
+      )
+      .join("")
+  }
   </creators>
   <titles>
     <title xml:lang="en-us">${title}</title>
@@ -28,46 +33,47 @@ export const template = ({
  * @param {string} doiConfig.username DOI service username
  * @param {string} doiConfig.password DOI service password
  */
-export const formatBasicAuth = doiConfig =>
-  'Basic ' +
-  Buffer.from(doiConfig.username + ':' + doiConfig.password).toString('base64')
+export const formatBasicAuth = (doiConfig) =>
+  "Basic " +
+  Buffer.from(doiConfig.username + ":" + doiConfig.password).toString("base64")
 
 export default {
   auth: formatBasicAuth(config.doi),
   createDOI(accNumber, snapshotId) {
-    let doi = config.doi.prefix + '/openneuro.' + accNumber
+    let doi = config.doi.prefix + "/openneuro." + accNumber
     if (snapshotId) {
-      doi = doi + '.v' + snapshotId
+      doi = doi + ".v" + snapshotId
     }
     return doi
   },
 
   async mintDOI(doi, url) {
     return await request
-      .put(config.doi.url + 'doi/' + doi)
-      .set('Authorization', this.auth)
-      .set('Content-Type', 'text/plain;charset=UTF-8')
-      .send('doi=' + doi + '\nurl=' + url)
+      .put(config.doi.url + "doi/" + doi)
+      .set("Authorization", this.auth)
+      .set("Content-Type", "text/plain;charset=UTF-8")
+      .send("doi=" + doi + "\nurl=" + url)
   },
 
   registerMetadata(context) {
     const xml = template(context)
     return request
-      .post(config.doi.url + 'metadata/')
-      .set('Authorization', this.auth)
-      .set('Content-Type', 'application/xml;charset=UTF-8')
+      .post(config.doi.url + "metadata/")
+      .set("Authorization", this.auth)
+      .set("Content-Type", "application/xml;charset=UTF-8")
       .send(xml)
   },
 
   registerSnapshotDoi(datasetId, snapshotId, oldDesc) {
     const baseDoi = this.createDOI(datasetId, snapshotId)
-    const url = `https://openneuro.org/datasets/${datasetId}/versions/${snapshotId}`
+    const url =
+      `https://openneuro.org/datasets/${datasetId}/versions/${snapshotId}`
     const context = {
       doi: baseDoi,
-      creators: oldDesc.Authors.filter(x => x),
+      creators: oldDesc.Authors.filter((x) => x),
       title: oldDesc.Name,
       year: new Date().getFullYear(),
-      resourceType: 'fMRI',
+      resourceType: "fMRI",
     }
     return this.registerMetadata(context)
       .then(() => {

package/src/libs/doi/normalize.ts

@@ -6,11 +6,11 @@ export const normalizeDOI = (doi: string): string | null => {
   if (doi.match(DOIPattern)) {
     return doi
   }
-  if (doi.toLowerCase().startsWith('doi:') && doi.slice(4).match(DOIPattern)) {
+  if (doi.toLowerCase().startsWith("doi:") && doi.slice(4).match(DOIPattern)) {
     return doi.slice(4)
   }
   if (
-    doi.toLowerCase().startsWith('https://doi.org/') &&
+    doi.toLowerCase().startsWith("https://doi.org/") &&
     doi.slice(16).match(DOIPattern)
   ) {
     return doi.slice(16)

package/src/libs/email/__tests__/index.spec.ts

@@ -1,24 +1,24 @@
-import { vi } from 'vitest'
-import { mailjetFormat } from '../index'
+import { vi } from "vitest"
+import { mailjetFormat } from "../index"
 
-vi.mock('ioredis')
-vi.mock('../../../config.js')
+vi.mock("ioredis")
+vi.mock("../../../config.ts")
 
-describe('Mailjet formatter', () => {
-  it('formats a message', () => {
+describe("Mailjet formatter", () => {
+  it("formats a message", () => {
     const testMessage = {
-      to: 'test@example.com',
-      name: 'Test User',
-      html: 'email content goes here',
-      subject: 'subject line',
+      to: "test@example.com",
+      name: "Test User",
+      html: "email content goes here",
+      subject: "subject line",
     }
     expect(mailjetFormat(testMessage)).toEqual({
       Messages: [
         {
-          From: { Email: 'notifications@example.com', Name: 'OpenNeuro' },
-          HTMLPart: 'email content goes here',
-          Subject: 'subject line',
-          To: [{ Email: 'test@example.com', Name: 'Test User' }],
+          From: { Email: "notifications@example.com", Name: "OpenNeuro" },
+          HTMLPart: "email content goes here",
+          Subject: "subject line",
+          To: [{ Email: "test@example.com", Name: "Test User" }],
         },
       ],
     })

package/src/libs/email/index.ts

@@ -1,9 +1,9 @@
-import config from '../../config'
+import config from "../../config"
 
 let transport
 let perform_api_call = true
 try {
-  const mailjet = require('node-mailjet')
+  const mailjet = require("node-mailjet")
   transport = mailjet.connect(
     config.notifications.email.apiKey,
     config.notifications.email.secret,
@@ -17,7 +17,7 @@ export const mailjetFormat = (email: Record<string, string>) => ({
     {
       From: {
         Email: config.notifications.email.from,
-        Name: 'OpenNeuro',
+        Name: "OpenNeuro",
       },
       To: [
         {
@@ -38,7 +38,7 @@ export const mailjetFormat = (email: Record<string, string>) => ({
 export const send = (email: Record<string, string>): Promise<Response> => {
   if (perform_api_call) {
     return transport
-      .post('send', { version: 'v3.1', perform_api_call })
+      .post("send", { version: "v3.1", perform_api_call })
       .request(mailjetFormat(email))
   } else {
     // Mailjet is not configured, instead log emails

package/src/libs/email/templates/__tests__/comment-created.spec.ts

@@ -1,18 +1,18 @@
-import { commentCreated } from '../comment-created'
+import { commentCreated } from "../comment-created"
 
-describe('email template -> comment created', () => {
-  it('renders with expected arguments', () => {
+describe("email template -> comment created", () => {
+  it("renders with expected arguments", () => {
     expect(
       commentCreated({
-        siteUrl: 'https://openneuro.org',
-        name: 'J. Doe',
-        commentStatus: 'new',
-        commentId: '12345',
-        commentUserId: '56789',
-        commentContent: 'Test comment, please ignore',
-        datasetName: 'ds1245678',
-        datasetLabel: 'Not Real Dataset',
-        dateCreated: '2063-04-05',
+        siteUrl: "https://openneuro.org",
+        name: "J. Doe",
+        commentStatus: "new",
+        commentId: "12345",
+        commentUserId: "56789",
+        commentContent: "Test comment, please ignore",
+        datasetName: "ds1245678",
+        datasetLabel: "Not Real Dataset",
+        dateCreated: "2063-04-05",
       }),
     ).toMatchSnapshot()
   })

package/src/libs/email/templates/__tests__/dataset-deleted.spec.ts

@@ -1,12 +1,12 @@
-import { datasetDeleted } from '../dataset-deleted'
+import { datasetDeleted } from "../dataset-deleted"
 
-describe('email template -> comment created', () => {
-  it('renders with expected arguments', () => {
+describe("email template -> comment created", () => {
+  it("renders with expected arguments", () => {
     expect(
       datasetDeleted({
-        siteUrl: 'https://openneuro.org',
-        name: 'J. Doe',
-        datasetName: 'ds1245678',
+        siteUrl: "https://openneuro.org",
+        name: "J. Doe",
+        datasetName: "ds1245678",
       }),
     ).toMatchSnapshot()
   })

package/src/libs/email/templates/__tests__/owner-unsubscribed.spec.ts

@@ -1,12 +1,12 @@
-import { ownerUnsubscribed } from '../owner-unsubscribed'
+import { ownerUnsubscribed } from "../owner-unsubscribed"
 
-describe('email template -> comment created', () => {
-  it('renders with expected arguments', () => {
+describe("email template -> comment created", () => {
+  it("renders with expected arguments", () => {
     expect(
       ownerUnsubscribed({
-        siteUrl: 'https://openneuro.org',
-        name: 'J. Doe',
-        datasetName: 'ds1245678',
+        siteUrl: "https://openneuro.org",
+        name: "J. Doe",
+        datasetName: "ds1245678",
       }),
     ).toMatchSnapshot()
   })

package/src/libs/email/templates/__tests__/snapshot-created.spec.ts

@@ -1,15 +1,15 @@
-import { snapshotCreated } from '../snapshot-created'
+import { snapshotCreated } from "../snapshot-created"
 
-describe('email template -> comment created', () => {
-  it('renders with expected arguments', () => {
+describe("email template -> comment created", () => {
+  it("renders with expected arguments", () => {
     expect(
       snapshotCreated({
-        siteUrl: 'https://openneuro.org',
-        name: 'J. Doe',
-        datasetId: 'ds1245678',
-        datasetLabel: 'Test Dataset Snapshot Created',
-        versionNumber: '1.2.4',
-        changelog: 'New changes...',
+        siteUrl: "https://openneuro.org",
+        name: "J. Doe",
+        datasetId: "ds1245678",
+        datasetLabel: "Test Dataset Snapshot Created",
+        versionNumber: "1.2.4",
+        changelog: "New changes...",
       }),
     ).toMatchSnapshot()
   })

package/src/libs/email/templates/__tests__/snapshot-reminder.spec.ts

@@ -1,13 +1,13 @@
-import { snapshotReminder } from '../snapshot-reminder'
+import { snapshotReminder } from "../snapshot-reminder"
 
-describe('email template -> comment created', () => {
-  it('renders with expected arguments', () => {
+describe("email template -> comment created", () => {
+  it("renders with expected arguments", () => {
     expect(
       snapshotReminder({
-        siteUrl: 'https://openneuro.org',
-        name: 'J. Doe',
-        datasetName: 'Reminding Dataset',
-        datasetId: 'ds12345678',
+        siteUrl: "https://openneuro.org",
+        name: "J. Doe",
+        datasetName: "Reminding Dataset",
+        datasetId: "ds12345678",
       }),
     ).toMatchSnapshot()
   })

package/src/libs/email/templates/comment-created.ts

@@ -18,7 +18,8 @@ export const commentCreated = ({
   datasetName: string
   datasetLabel: string
   dateCreated: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/dataset-deleted.ts

@@ -6,7 +6,8 @@ export const datasetDeleted = ({
   siteUrl: string
   name: string
   datasetName: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/dataset-import-failed.ts

@@ -10,7 +10,8 @@ export const datasetImportFailed = ({
   datasetId: string
   message: string
   retryUrl: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/dataset-imported.ts

@@ -6,7 +6,8 @@ export const datasetImportEmail = ({
   siteUrl: string
   name: string
   datasetId: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/owner-unsubscribed.ts

@@ -6,7 +6,8 @@ export const ownerUnsubscribed = ({
   siteUrl: string
   name: string
   datasetName: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/snapshot-created.ts

@@ -12,7 +12,8 @@ export const snapshotCreated = ({
   datasetId: string
   versionNumber: string
   changelog: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {

package/src/libs/email/templates/snapshot-reminder.ts

@@ -8,7 +8,8 @@ export const snapshotReminder = ({
   name: string
   datasetName: string
   datasetId: string
-}): string => `<html>
+}): string =>
+  `<html>
 <head>
 <style>
 	body {