@openneuro/app 4.4.9 → 4.5.1

package/src/scripts/refactor_2021/dataset/draft-container.tsx

@@ -1,435 +0,0 @@
-import React from 'react'
-import Markdown from 'markdown-to-jsx'
-import { useLocation, Redirect } from 'react-router-dom'
-import pluralize from 'pluralize'
-import formatDistanceToNow from 'date-fns/formatDistanceToNow'
-import parseISO from 'date-fns/parseISO'
-
-import Validation from '../validation/validation.jsx'
-import Files from './files'
-import { config } from '../../config'
-import {
-  getUnexpiredProfile,
-  hasEditPermissions,
-  hasDatasetAdminPermissions,
-} from '../authentication/profile'
-import { useCookies } from 'react-cookie'
-import Comments from './comments/comments.jsx'
-import { DatasetAlertDraft } from './fragments/dataset-alert-draft'
-import {
-  MetaDataBlock,
-  ModalitiesMetaDataBlock,
-  BrainLifeButton,
-  ValidationBlock,
-  CloneDropdown,
-  DatasetHeader,
-  DatasetHeaderMeta,
-  DatasetPage,
-  DatasetGitAccess,
-  VersionList,
-  DatasetTools,
-} from '@openneuro/components/dataset'
-import { ReadMore } from '@openneuro/components/read-more'
-
-import { FollowDataset } from './mutations/follow'
-import { StarDataset } from './mutations/star'
-
-import EditDescriptionField from './fragments/edit-description-field.jsx'
-import EditDescriptionList from './fragments/edit-description-list.jsx'
-import { DOILink } from './fragments/doi-link'
-
-export interface DraftContainerProps {
-  dataset
-  tag?: string
-}
-
-const formatDate = dateObject =>
-  new Date(dateObject).toISOString().split('T')[0]
-
-// Helper function for getting version from URL
-const snapshotVersion = location => {
-  const matches = location.pathname.match(/versions\/(.*?)(\/|$)/)
-  return matches && matches[1]
-}
-const DraftContainer: React.FC<DraftContainerProps> = ({ dataset }) => {
-  const location = useLocation()
-  const activeDataset = snapshotVersion(location) || 'draft'
-
-  const [selectedVersion, setSelectedVersion] = React.useState(activeDataset)
-
-  const summary = dataset.draft.summary
-  const description = dataset.draft.description
-  const datasetId = dataset.id
-
-  const numSessions =
-    summary && summary.sessions.length > 0 ? summary.sessions.length : 1
-
-  const dateAdded = formatDate(dataset.created)
-  const dateAddedDifference = formatDistanceToNow(parseISO(dataset.created))
-  const dateModified = formatDate(dataset.draft.modified)
-  const dateUpdatedDifference = formatDistanceToNow(
-    parseISO(dataset.draft.modified),
-  )
-  const isSnapshot = activeDataset !== 'draft'
-
-  const [cookies] = useCookies()
-  const profile = getUnexpiredProfile(cookies)
-  const isAdmin = profile?.admin
-  const hasEdit =
-    hasEditPermissions(dataset.permissions, profile?.sub) || isAdmin
-  const hasDraftChanges =
-    dataset.snapshots.length === 0 ||
-    dataset.draft.head !==
-      dataset.snapshots[dataset.snapshots.length - 1].hexsha
-  const isDatasetAdmin =
-    hasDatasetAdminPermissions(dataset.permissions, profile?.sub) || isAdmin
-
-  return (
-    <>
-      {dataset.snapshots && !hasEdit && (
-        <Redirect
-          to={`/datasets/${dataset.id}/versions/${
-            dataset.snapshots.length &&
-            dataset.snapshots[dataset.snapshots.length - 1].tag
-          }`}
-        />
-      )}
-      <DatasetPage
-        modality={summary?.modalities[0] || ''}
-        renderHeader={() => (
-          <>
-            <DatasetHeader
-              pageHeading={description.Name}
-              modality={summary?.modalities[0] || null}
-              renderEditor={() => (
-                <EditDescriptionField
-                  datasetId={datasetId}
-                  field="Name"
-                  rows={2}
-                  description={description.Name}
-                  editMode={hasEdit}>
-                  {description.Name}
-                </EditDescriptionField>
-              )}
-            />
-          </>
-        )}
-        renderAlert={() => (
-          <>
-            {hasEdit && (
-              <DatasetAlertDraft
-                isPrivate={!dataset.public}
-                datasetId={dataset.id}
-                hasDraftChanges={hasDraftChanges}
-                hasSnapshot={dataset.snapshots.length !== 0}
-              />
-            )}
-          </>
-        )}
-        renderHeaderMeta={() => (
-          <>
-            {summary && (
-              <DatasetHeaderMeta
-                size={summary.size}
-                totalFiles={summary.totalFiles}
-                datasetId={datasetId}
-              />
-            )}
-          </>
-        )}
-        renderFollowBookmark={() => (
-          <>
-            <FollowDataset
-              profile={profile}
-              datasetId={dataset.id}
-              following={dataset.following}
-              followers={dataset.followers.length}
-            />
-            <StarDataset
-              profile={profile}
-              datasetId={dataset.id}
-              starred={dataset.starred}
-              stars={dataset.stars.length}
-            />
-          </>
-        )}
-        renderBrainLifeButton={() => (
-          <BrainLifeButton
-            datasetId={datasetId}
-            onBrainlife={dataset.onBrainlife}
-          />
-        )}
-        renderValidationBlock={() => (
-          <ValidationBlock>
-            <Validation datasetId={dataset.id} issues={dataset.draft.issues} />
-          </ValidationBlock>
-        )}
-        renderCloneDropdown={() => (
-          <CloneDropdown
-            gitAccess={
-              <DatasetGitAccess
-                hasEdit={hasEdit}
-                configGithub={config.github}
-                configUrl={config.url}
-                worker={dataset.worker}
-                datasetId={datasetId}
-                gitHash={dataset.draft.head}
-              />
-            }
-          />
-        )}
-        renderToolButtons={() => (
-          <DatasetTools
-            hasEdit={hasEdit}
-            isPublic={dataset.public}
-            datasetId={datasetId}
-            isAdmin={isAdmin}
-            hasSnapshot={dataset.snapshots.length !== 0}
-            isDatasetAdmin={isDatasetAdmin}
-          />
-        )}
-        renderFiles={() => (
-          <ReadMore
-            fileTree={true}
-            id="collapse-tree"
-            expandLabel="Expand File Tree"
-            collapseLabel="Collapse File Tree">
-            <Files
-              datasetId={datasetId}
-              snapshotTag={null}
-              datasetName={dataset.draft.description.Name}
-              files={dataset.draft.files}
-              editMode={hasEdit}
-              datasetPermissions={dataset.permissions}
-            />
-          </ReadMore>
-        )}
-        renderReadMe={() => (
-          <MetaDataBlock
-            heading="README"
-            className="dataset-readme markdown-body"
-            item={dataset.draft.readme}
-            renderEditor={() => (
-              <EditDescriptionField
-                datasetId={datasetId}
-                field="readme"
-                rows={12}
-                description={dataset.draft.readme}
-                editMode={hasEdit}>
-                <ReadMore
-                  id="readme"
-                  expandLabel="Read More"
-                  collapseLabel="Collapse">
-                  <Markdown>{dataset.draft.readme || 'N/A'}</Markdown>
-                </ReadMore>
-              </EditDescriptionField>
-            )}
-          />
-        )}
-        renderSidebar={() => (
-          <>
-            <EditDescriptionList
-              className="dmb-inline-list"
-              datasetId={datasetId}
-              field="Authors"
-              heading="Authors"
-              description={description.Authors}
-              editMode={hasEdit}>
-              {description?.Authors?.length ? description.Authors : ['N/A']}
-            </EditDescriptionList>
-
-            {summary && (
-              <ModalitiesMetaDataBlock
-                items={summary.modalities}
-                className="dmb-modalities"
-              />
-            )}
-
-            <MetaDataBlock
-              heading={dataset.snapshots.length ? 'Versions' : 'Version'}
-              item={
-                <div className="version-block">
-                  <VersionList
-                    datasetId={datasetId}
-                    hasEdit={hasEdit}
-                    items={dataset.snapshots}
-                    className="version-dropdown"
-                    activeDataset={activeDataset}
-                    dateModified={dateModified}
-                    selected={selectedVersion}
-                    setSelected={setSelectedVersion}
-                  />
-                </div>
-              }
-            />
-            {summary && (
-              <MetaDataBlock
-                heading="Tasks"
-                item={summary.tasks.length ? summary.tasks.join(', ') : 'N/A'}
-                className="dmb-inline-list"
-              />
-            )}
-            {summary?.modalities.includes('pet') ||
-              summary?.modalities.includes('Pet') ||
-              (summary?.modalities.includes('PET') && (
-                <>
-                  <MetaDataBlock
-                    heading={pluralize('Target', summary.pet?.BodyPart)}
-                    item={summary.pet?.BodyPart}
-                  />
-                  <MetaDataBlock
-                    heading={pluralize(
-                      'Scanner Manufacturer',
-                      summary.pet?.ScannerManufacturer,
-                    )}
-                    item={
-                      summary.pet?.ScannerManufacturer
-                        ? summary.pet?.ScannerManufacturer
-                        : 'N/A'
-                    }
-                  />
-
-                  <MetaDataBlock
-                    heading={pluralize(
-                      'Scanner Model',
-                      summary.pet?.ScannerManufacturersModelName,
-                    )}
-                    item={
-                      summary.pet?.ScannerManufacturersModelName
-                        ? summary.pet?.ScannerManufacturersModelName
-                        : 'N/A'
-                    }
-                  />
-                  <MetaDataBlock
-                    heading={pluralize(
-                      'Radionuclide',
-                      summary.pet?.TracerRadionuclide,
-                    )}
-                    item={
-                      summary.pet?.TracerRadionuclide
-                        ? summary.pet?.TracerRadionuclide
-                        : 'N/A'
-                    }
-                  />
-                  <MetaDataBlock
-                    heading={pluralize('Radiotracer', summary.pet?.TracerName)}
-                    item={
-                      summary.pet?.TracerName ? summary.pet?.TracerName : 'N/A'
-                    }
-                  />
-                </>
-              ))}
-
-            <MetaDataBlock
-              heading="Uploaded by"
-              item={
-                <>
-                  {dataset.uploader.name} on {dateAdded} - {dateAddedDifference}{' '}
-                  ago
-                </>
-              }
-            />
-
-            {dataset.snapshots?.length ? (
-              <MetaDataBlock
-                heading="Last Updated"
-                item={
-                  <>
-                    {dateModified} - {dateUpdatedDifference} ago
-                  </>
-                }
-              />
-            ) : null}
-            <MetaDataBlock heading="Sessions" item={numSessions} />
-            <>
-              {summary && (
-                <MetaDataBlock
-                  heading="Participants"
-                  item={summary.subjects.length}
-                />
-              )}
-            </>
-
-            <MetaDataBlock
-              heading="Dataset DOI"
-              item={<DOILink DOI={description.DatasetDOI} />}
-            />
-            <MetaDataBlock heading="License" item={description.License} />
-
-            <MetaDataBlock
-              heading="Acknowledgements"
-              item={description.Acknowledgements}
-              renderEditor={() => (
-                <EditDescriptionField
-                  datasetId={datasetId}
-                  field="Acknowledgements"
-                  rows={2}
-                  description={description.Acknowledgements}
-                  editMode={hasEdit}>
-                  <Markdown>{description.Acknowledgements || 'N/A'}</Markdown>
-                </EditDescriptionField>
-              )}
-            />
-
-            <MetaDataBlock
-              heading="How to Acknowledge"
-              item={description.HowToAcknowledge}
-              renderEditor={() => (
-                <EditDescriptionField
-                  datasetId={datasetId}
-                  field="HowToAcknowledge"
-                  rows={2}
-                  description={description.HowToAcknowledge}
-                  editMode={hasEdit}>
-                  <Markdown>{description.HowToAcknowledge || 'N/A'}</Markdown>
-                </EditDescriptionField>
-              )}
-            />
-
-            <EditDescriptionList
-              className="dmb-list"
-              datasetId={datasetId}
-              field="Funding"
-              heading="Funding"
-              description={description.Funding}
-              editMode={hasEdit}>
-              {description.Funding?.length ? description.Funding : ['N/A']}
-            </EditDescriptionList>
-
-            <EditDescriptionList
-              className="dmb-list"
-              datasetId={datasetId}
-              field="ReferencesAndLinks"
-              heading="References and Links"
-              description={description.ReferencesAndLinks}
-              editMode={hasEdit}>
-              {description.ReferencesAndLinks?.length
-                ? description.ReferencesAndLinks
-                : ['N/A']}
-            </EditDescriptionList>
-
-            <EditDescriptionList
-              className="dmb-list"
-              datasetId={datasetId}
-              field="EthicsApprovals"
-              heading="Ethics Approvals"
-              description={description.EthicsApprovals}
-              editMode={hasEdit}>
-              {description.EthicsApprovals?.length
-                ? description.EthicsApprovals
-                : ['N/A']}
-            </EditDescriptionList>
-          </>
-        )}
-        renderComments={() => (
-          <Comments
-            datasetId={dataset.id}
-            uploader={dataset.uploader}
-            comments={dataset.comments}
-          />
-        )}
-      />
-    </>
-  )
-}
-export default DraftContainer

package/src/scripts/refactor_2021/utils/datalad.js

@@ -1,13 +0,0 @@
-import { datasets } from '@openneuro/client'
-
-export function trackAnalytics(client, datasetId, options) {
-  options = options || {}
-  return client.mutate({
-    mutation: datasets.trackAnalytics,
-    variables: {
-      datasetId: datasetId,
-      tag: options.tag,
-      type: options.type,
-    },
-  })
-}

package/src/scripts/refactor_2021/utils/gtag.js

@@ -1,22 +0,0 @@
-/*global globalThis*/
-globalThis.dataLayer = globalThis.dataLayer || []
-
-function gtag() {
-  globalThis.dataLayer.push(arguments)
-}
-
-gtag('js', new Date())
-
-export const initialize = trackingIds =>
-  trackingIds.forEach(trackingId => gtag('config', trackingId))
-
-export const pageview = path =>
-  gtag('event', 'page_view', {
-    page_path: path,
-  })
-
-export const event = ({ category, action, label }) =>
-  gtag('event', action, {
-    event_category: category,
-    event_label: label,
-  })