@openneuro/app 4.1.0 → 4.2.1

package/src/scripts/datalad/routes/__tests__/__snapshots__/manage-permissions.spec.jsx.snap

@@ -1,159 +0,0 @@
-// Jest Snapshot v1, https://goo.gl/fbAQLP
-
-exports[`Manage dataset permissions route PermissionRow renders for admin permissions 1`] = `
-<tr>
-  <td
-    className="col-xs-4"
-  >
-    tester@example.com
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    Edit dataset and edit permissions
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    <RemovePermissions
-      datasetId="ds00001"
-      userId="1234"
-    />
-  </td>
-</tr>
-`;
-
-exports[`Manage dataset permissions route PermissionRow renders for ro permissions 1`] = `
-<tr>
-  <td
-    className="col-xs-4"
-  >
-    tester@example.com
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    View dataset
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    <RemovePermissions
-      datasetId="ds00001"
-      userId="1234"
-    />
-  </td>
-</tr>
-`;
-
-exports[`Manage dataset permissions route PermissionRow renders for rw permissions 1`] = `
-<tr>
-  <td
-    className="col-xs-4"
-  >
-    tester@example.com
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    Edit dataset
-  </td>
-  <td
-    className="col-xs-2"
-  >
-    <RemovePermissions
-      datasetId="ds00001"
-      userId="1234"
-    />
-  </td>
-</tr>
-`;
-
-exports[`Manage dataset permissions route ShareTable renders with many permissions 1`] = `
-<table
-  className="table"
->
-  <thead>
-    <tr>
-      <th>
-        Email
-      </th>
-      <th>
-        Access
-      </th>
-      <th>
-        Edit
-      </th>
-    </tr>
-  </thead>
-  <tbody>
-    <PermissionRow
-      datasetId="ds001"
-      key="0"
-      userEmail="test@example.com"
-      userId="1234"
-    />
-    <PermissionRow
-      datasetId="ds001"
-      key="1"
-      userEmail="tester@example.com"
-      userId="5678"
-    />
-    <PermissionRow
-      datasetId="ds001"
-      key="2"
-      userEmail="testr@example.com"
-      userId="91011"
-    />
-  </tbody>
-</table>
-`;
-
-exports[`Manage dataset permissions route ShareTable renders with no permissions 1`] = `
-<table
-  className="table"
->
-  <thead>
-    <tr>
-      <th>
-        Email
-      </th>
-      <th>
-        Access
-      </th>
-      <th>
-        Edit
-      </th>
-    </tr>
-  </thead>
-  <tbody />
-</table>
-`;
-
-exports[`Manage dataset permissions route ShareTable renders with one permission 1`] = `
-<table
-  className="table"
->
-  <thead>
-    <tr>
-      <th>
-        Email
-      </th>
-      <th>
-        Access
-      </th>
-      <th>
-        Edit
-      </th>
-    </tr>
-  </thead>
-  <tbody>
-    <PermissionRow
-      datasetId="ds001"
-      key="0"
-      userEmail="test@example.com"
-      userId="1234"
-    />
-  </tbody>
-</table>
-`;

package/src/scripts/datalad/routes/__tests__/__snapshots__/snapshot.spec.jsx.snap

@@ -1,31 +0,0 @@
-// Jest Snapshot v1, https://goo.gl/fbAQLP
-
-exports[`NoErrors component in SnapshotRoute handles case of errors and no authors 1`] = `
-<span
-  className="text-danger"
->
-  BIDS validation must be complete and all errors corrected and "Authors" must include at least one entry in dataset_description.json to create a snapshot
-</span>
-`;
-
-exports[`NoErrors component in SnapshotRoute handles extant errors case 1`] = `
-<span
-  className="text-danger"
->
-  BIDS validation must be complete and all errors corrected to create a snapshot
-</span>
-`;
-
-exports[`NoErrors component in SnapshotRoute handles no authors case 1`] = `
-<span
-  className="text-danger"
->
-  "Authors" must include at least one entry in dataset_description.json to create a snapshot
-</span>
-`;
-
-exports[`NoErrors component in SnapshotRoute returns children when issues are okay 1`] = `
-<div>
-  child
-</div>
-`;

package/src/scripts/datalad/routes/__tests__/dataset-content.spec.jsx

@@ -1,108 +0,0 @@
-import React from 'react'
-import { shallow } from 'enzyme'
-import { render, screen } from '@testing-library/react'
-import { DatasetContent, HasBeenPublished } from '../dataset-content.jsx'
-import { hasEditPermissions } from '../../../refactor_2021/authentication/profile.js'
-import { BrowserRouter } from 'react-router-dom'
-import cookies from '../../../refactor_2021/utils/cookies.js'
-
-// eslint-disable-next-line
-jest.mock('../../fragments/dataset-files.jsx', () => () => (
-  <div>Mock File Tree</div>
-))
-
-describe('DatasetContent component', () => {
-  describe('HasBeenPublished', () => {
-    it('public datasets show success banner', () => {
-      const wrapper = shallow(<HasBeenPublished datasetId="1" />)
-      expect(wrapper.at(0).hasClass('alert-success')).toBeTruthy()
-    })
-    it('public datasets with draft changes show warning banner', () => {
-      const wrapper = shallow(
-        <HasBeenPublished datasetId="1" hasDraftChanges />,
-      )
-      expect(wrapper.at(0).hasClass('alert-warning')).toBeTruthy()
-    })
-    it('non-public datasets show warning banner', () => {
-      const wrapper = shallow(<HasBeenPublished datasetId="1" isPrivate />)
-      expect(wrapper.at(0).hasClass('alert-warning')).toBeTruthy()
-    })
-  })
-  describe('hasEditPermissions()', () => {
-    it('returns false for anonymous users', () => {
-      expect(hasEditPermissions([{}])).toBe(false)
-    })
-    it('returns true for admin users', () => {
-      expect(
-        hasEditPermissions(
-          { userPermissions: [{ user: { id: '1234' }, level: 'admin' }] },
-          '1234',
-        ),
-      ).toBe(true)
-    })
-    it('returns true for rw users', () => {
-      expect(
-        hasEditPermissions(
-          { userPermissions: [{ user: { id: '1234' }, level: 'rw' }] },
-          '1234',
-        ),
-      ).toBe(true)
-    })
-    it('returns false for ro users', () => {
-      expect(
-        hasEditPermissions(
-          { userPermissions: [{ user: { id: '1234' }, level: 'ro' }] },
-          '1234',
-        ),
-      ).toBe(false)
-    })
-  })
-  it('renders when no snapshots are present', () => {
-    const datasetDraftOnly = {
-      created: '2021-01-26T17:10:53.738Z',
-      public: false,
-      draft: {
-        modified: '2021-01-26T17:10:53.738Z',
-        head: 'deb75470ec18e8656f4d6f7ad4b0f3b65bad7884',
-        description: {
-          Name: 'test dataset',
-        },
-        files: [{}],
-        issues: [],
-      },
-      permissions: {
-        userPermissions: [
-          {
-            level: 'admin',
-            user: { id: '123456', email: 'tests@example.com' },
-          },
-        ],
-      },
-      analytics: {
-        downloads: 1,
-        views: 1,
-      },
-      snapshots: [],
-      metadata: null,
-      uploader: {
-        name: 'test user',
-      },
-      worker: 'dataset-worker-0',
-    }
-    cookies.set(
-      'accessToken',
-      'eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJzdWIiOiIxMjM0NTYiLCJlbWFpbCI6InRlc3RzQGV4YW1wbGUuY29tIiwicHJvdmlkZXIiOiJnb29nbGUiLCJuYW1lIjoiVGVzdCBVc2VyIiwiYWRtaW4iOmZhbHNlLCJpYXQiOjE2MTE2ODEwNjcsImV4cCI6MjE0NzQ4MzY0N30.fDNpHGjvzCodz7OlKrFudHRioPoDSnufi6saeAyAqBA',
-    )
-    render(
-      <BrowserRouter>
-        <DatasetContent dataset={datasetDraftOnly} />
-      </BrowserRouter>,
-    )
-    // Look for some text that's always rendered
-    expect(screen.getAllByText('README').pop()).toHaveTextContent('README')
-    // Verify something specific to this example dataset
-    expect(screen.getAllByText('test dataset').pop()).toHaveTextContent(
-      'test dataset',
-    )
-  })
-})

package/src/scripts/datalad/routes/__tests__/file-display.spec.jsx

@@ -1,22 +0,0 @@
-import React from 'react'
-import { shallow } from 'enzyme'
-import { FileDisplayBreadcrumb } from '../file-display.jsx'
-
-describe('File Display route', () => {
-  describe('FileDisplayBreadcrumb component', () => {
-    it('renders top level paths as files', () => {
-      const wrapper = shallow(<FileDisplayBreadcrumb filePath="README" />)
-      expect(wrapper.find('i.fa').hasClass('fa-file-o')).toBe(true)
-    })
-    it('renders nested paths as dir -> file trees', () => {
-      const wrapper = shallow(
-        <FileDisplayBreadcrumb filePath="derivatives:README" />,
-      )
-      const icons = wrapper.find('i.fa')
-      // Dir as the first node
-      expect(icons.at(0).hasClass('fa-folder-open-o')).toBe(true)
-      // File as the leaf
-      expect(icons.at(1).hasClass('fa-file-o')).toBe(true)
-    })
-  })
-})

package/src/scripts/datalad/routes/__tests__/manage-permissions.spec.jsx

@@ -1,101 +0,0 @@
-import React from 'react'
-import { shallow } from 'enzyme'
-import { PermissionRow, ShareTable } from '../manage-permissions.jsx'
-
-describe('Manage dataset permissions route', () => {
-  describe('PermissionRow', () => {
-    it('renders for admin permissions', () => {
-      expect(
-        shallow(
-          <PermissionRow
-            datasetId="ds00001"
-            userId="1234"
-            userEmail="tester@example.com"
-            access="admin"
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-    it('renders for ro permissions', () => {
-      expect(
-        shallow(
-          <PermissionRow
-            datasetId="ds00001"
-            userId="1234"
-            userEmail="tester@example.com"
-            access="ro"
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-    it('renders for rw permissions', () => {
-      expect(
-        shallow(
-          <PermissionRow
-            datasetId="ds00001"
-            userId="1234"
-            userEmail="tester@example.com"
-            access="rw"
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-  })
-  describe('ShareTable', () => {
-    const id = 'ds001'
-    it('renders with no permissions', () => {
-      expect(
-        shallow(
-          <ShareTable
-            datasetId={id}
-            permissions={{ id, userPermissions: [] }}
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-    it('renders with one permission', () => {
-      expect(
-        shallow(
-          <ShareTable
-            datasetId={id}
-            permissions={{
-              id,
-              userPermissions: [
-                {
-                  user: { id: '1234', email: 'test@example.com' },
-                  access: 'ro',
-                },
-              ],
-            }}
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-    it('renders with many permissions', () => {
-      expect(
-        shallow(
-          <ShareTable
-            datasetId={id}
-            permissions={{
-              id,
-              userPermissions: [
-                {
-                  user: { id: '1234', email: 'test@example.com' },
-                  access: 'ro',
-                },
-                {
-                  user: { id: '5678', email: 'tester@example.com' },
-                  access: 'rw',
-                },
-                {
-                  user: { id: '91011', email: 'testr@example.com' },
-                  access: 'admin',
-                },
-              ],
-            }}
-          />,
-        ),
-      ).toMatchSnapshot()
-    })
-  })
-})

package/src/scripts/datalad/routes/__tests__/snapshot.spec.jsx

@@ -1,49 +0,0 @@
-import React from 'react'
-import { shallow } from 'enzyme'
-import { NoErrors } from '../snapshot.jsx'
-
-describe('NoErrors component in SnapshotRoute', () => {
-  it('handles extant errors case', () => {
-    const issues = [{ severity: 'error' }]
-    expect(
-      shallow(
-        <NoErrors issues={issues}>
-          <div>child</div>
-        </NoErrors>,
-      ),
-    ).toMatchSnapshot()
-  })
-  it('handles no authors case', () => {
-    const issues = [{ severity: 'warning', code: 113, key: 'NO_AUTHORS' }]
-    expect(
-      shallow(
-        <NoErrors issues={issues}>
-          <div>child</div>
-        </NoErrors>,
-      ),
-    ).toMatchSnapshot()
-  })
-  it('handles case of errors and no authors', () => {
-    const issues = [
-      { severity: 'error' },
-      { severity: 'warning', code: 113, key: 'NO_AUTHORS' },
-    ]
-    expect(
-      shallow(
-        <NoErrors issues={issues}>
-          <div>child</div>
-        </NoErrors>,
-      ),
-    ).toMatchSnapshot()
-  })
-  it('returns children when issues are okay', () => {
-    const issues = []
-    expect(
-      shallow(
-        <NoErrors issues={issues}>
-          <div>child</div>
-        </NoErrors>,
-      ),
-    ).toMatchSnapshot()
-  })
-})

package/src/scripts/datalad/routes/admin-datalad.jsx

@@ -1,45 +0,0 @@
-import React from 'react'
-import PropTypes from 'prop-types'
-import { Link } from 'react-router-dom'
-import DatasetHistory from '../fragments/dataset-history.jsx'
-import CacheClear from '../mutations/cache-clear.jsx'
-
-const AdminDataset = ({ dataset }) => (
-  <div className="dataset-form">
-    <div className="col-lg-12 dataset-form-header">
-      <div className="form-group">
-        <label>Admin: Datalad Tools</label>
-      </div>
-      <div className="col-lg-12">
-        <p>
-          Delete dataset cache drops all dataset caches (snapshot index,
-          draft/snapshot file listings, current dataset description) and the
-          cache is repopulated on the next API call.
-        </p>
-        <p>
-          Reset draft head will move the draft to a given commit and rerun
-          validation.
-        </p>
-      </div>
-      <div className="col-lg-6">
-        <h3>Draft Head</h3> {dataset.draft.head}
-      </div>
-      <DatasetHistory datasetId={dataset.id} />
-      <hr />
-      <div className="col-lg-12 dataset-form-controls">
-        <div className="col-lg-12 modal-actions">
-          <Link to={`/datasets/${dataset.id}`}>
-            <button className="btn-admin-blue">Return to Dataset</button>
-          </Link>
-          <CacheClear datasetId={dataset.id} />
-        </div>
-      </div>
-    </div>
-  </div>
-)
-
-AdminDataset.propTypes = {
-  dataset: PropTypes.object,
-}
-
-export default AdminDataset

package/src/scripts/datalad/routes/admin-exports.jsx

@@ -1,125 +0,0 @@
-// dependencies -------------------------------------------------------
-
-import React from 'react'
-import { gql, useMutation } from '@apollo/client'
-import Helmet from 'react-helmet'
-import { pageTitle } from '../../resources/strings'
-import PropTypes from 'prop-types'
-import { reexporterLogsURL } from '../../resources/kibana'
-import styled from '@emotion/styled'
-
-const ButtonsContainer = styled.div({
-  display: 'flex',
-  flexDirection: 'column',
-  alignItems: 'center',
-  padding: '20px',
-  minWidth: '300px',
-})
-
-const NormalizedButton = styled.button({
-  margin: 0,
-  fontWeight: 400,
-  fontSize: '12pt',
-  textAlign: 'center',
-  padding: '9px 12px',
-  width: '100%',
-})
-
-const SuccessMessage = styled.p({
-  color: 'rgb(92, 184, 92)',
-})
-const InProgressMessage = styled.p({
-  color: 'orange',
-})
-const ErrorMessage = styled.p({
-  color: 'red',
-})
-
-const DividerContainer = styled.div({
-  display: 'flex',
-  justifyContent: 'center',
-  alignItems: 'center',
-  width: '100%',
-})
-const HBar = styled.div({
-  height: '2px',
-  backgroundColor: 'lightgrey',
-  flexGrow: 1,
-})
-const DividerText = styled.p({
-  padding: '19px 1rem',
-  margin: 0,
-  fontWeight: 400,
-  fontSize: '14pt',
-  textAlign: 'center',
-})
-
-const Divider = ({ text }) => (
-  <DividerContainer>
-    <HBar />
-    <DividerText>{text}</DividerText>
-    <HBar />
-  </DividerContainer>
-)
-
-Divider.propTypes = {
-  text: PropTypes.string,
-}
-
-const REEXPORT_REMOTES = gql`
-  mutation reexportRemotes($datasetId: ID!) {
-    reexportRemotes(datasetId: $datasetId)
-  }
-`
-
-const AdminExports = ({ dataset }) => {
-  const [reexportRemotes, { data, loading, error }] = useMutation(
-    REEXPORT_REMOTES,
-  )
-  const success = data && data.reexportRemotes
-  return (
-    <>
-      <Helmet>
-        <title>Admin Dashboard - {pageTitle}</title>
-      </Helmet>
-      <div className="dataset-form">
-        <div className="col-lg-12 dataset-form-header">
-          <div className="form-group">
-            <label>Admin: Remote Exports</label>
-          </div>
-        </div>
-
-        <div className="col-xs-4">
-          <ButtonsContainer>
-            {loading && (
-              <InProgressMessage>Your export is starting.</InProgressMessage>
-            )}
-            {error && <ErrorMessage>An error has occurred.</ErrorMessage>}
-            {success && <SuccessMessage>Your export has begun.</SuccessMessage>}
-            <NormalizedButton
-              className="btn-modal-action"
-              onClick={() =>
-                reexportRemotes({ variables: { datasetId: dataset.id } })
-              }>
-              Run Export
-            </NormalizedButton>
-            <Divider text="or" />
-            <NormalizedButton
-              className="btn-blue"
-              onClick={() => {
-                window.open(reexporterLogsURL, '_blank')
-              }}>
-              View Export Logs
-            </NormalizedButton>
-          </ButtonsContainer>
-        </div>
-      </div>
-    </>
-  )
-}
-
-AdminExports.propTypes = {
-  dataset: PropTypes.object,
-}
-
-export default AdminExports