@openmrs/esm-laboratory-app 1.1.2-pre.88 → 1.2.1-pre.590

package/dist/openmrs-esm-laboratory-app.js.map

@@ -1 +1 @@
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package/dist/routes.json

@@ -1 +1 @@
-{"$schema":"https://json.openmrs.org/routes.schema.json","backendDependencies":{"webservices.rest":"^2.24.0"},"pages":[{"component":"root","route":"laboratory"}],"extensions":[{"name":"laboratory-dashboard","slot":"laboratory-dashboard-slot","component":"root"},{"name":"laboratory-dashboard-link","slot":"homepage-dashboard-slot","component":"laboratoryDashboardLink","meta":{"name":"laboratory","slot":"laboratory-dashboard-slot","title":"Laboratory"}},{"name":"pickup-lab-request-modal","component":"pickupLabRequestModal"},{"name":"reject-lab-request-modal","component":"rejectLabRequestModal"},{"name":"all-lab-requests-table","slot":"lab-panels-slot","component":"allLabRequestsTable","meta":{"name":"inprogressPanel","title":"Tests ordered"}},{"name":"inprogress-lab-requests-table","slot":"lab-panels-slot","component":"inprogressLabRequestsTable","meta":{"name":"inprogressPanel","title":"In progress"}},{"name":"completed-lab-requests-table","slot":"lab-panels-slot","component":"completedLabRequestsTable","meta":{"name":"completedPanel","title":"Completed"}},{"name":"tests-ordered-tile-component","slot":"lab-tiles-slot","component":"testOrderedTile","meta":{"name":"testsOrderedTileSlot","title":"Ordered tests"}},{"name":"worklist-tile-component","slot":"lab-tiles-slot","component":"worklistTile","meta":{"name":"worklisTileSlot","title":"Worklist"}},{"name":"completed-tile-component","slot":"lab-tiles-slot","component":"completedTile","meta":{"name":"referredPanleSlot","title":"Referred tests"}},{"name":"declined-tile-component","slot":"lab-panels-slot","component":"declinedLabRequestsTable","meta":{"name":"declinedPanel","title":"Declined tests"}},{"name":"pick-lab-request-action","component":"pickupLabRequestAction","slot":"tests-ordered-actions-slot"},{"name":"reject-lab-request-tests-ordered-action","component":"rejectLabRequestAction","slot":"rejected-ordered-actions-slot"},{"name":"edit-lab-request-tests-ordered-action","component":"editLabRequestAction","slot":"completed-ordered-actions-slot"},{"name":"reject-lab-request-worklist-action","component":"rejectLabRequestAction","slot":"inprogress-tests-actions-slot"},{"name":"add-lab-request-results-action","component":"addLabRequestResultsAction","slot":"inprogress-tests-actions-slot"},{"name":"edit-lab-request-tests-ordered-action","component":"editLabRequestAction","slot":"completed-ordered-actions-slot"}],"version":"1.1.2-pre.88"}
+{"$schema":"https://json.openmrs.org/routes.schema.json","backendDependencies":{"webservices.rest":"^2.24.0"},"pages":[{"component":"root","route":"laboratory"}],"extensions":[{"name":"laboratory-dashboard","slot":"laboratory-dashboard-slot","component":"root"},{"name":"laboratory-dashboard-link","slot":"homepage-dashboard-slot","component":"laboratoryDashboardLink","meta":{"name":"laboratory","slot":"laboratory-dashboard-slot","title":"Laboratory"}},{"name":"pickup-lab-request-modal","component":"pickupLabRequestModal"},{"name":"reject-lab-request-modal","component":"rejectLabRequestModal"},{"name":"all-lab-requests-table","slot":"lab-panels-slot","component":"allLabRequestsTable","meta":{"name":"inprogressPanel","title":"Tests ordered"}},{"name":"inprogress-lab-requests-table","slot":"lab-panels-slot","component":"inprogressLabRequestsTable","meta":{"name":"inprogressPanel","title":"In progress"}},{"name":"completed-lab-requests-table","slot":"lab-panels-slot","component":"completedLabRequestsTable","meta":{"name":"completedPanel","title":"Completed"}},{"name":"tests-ordered-tile-component","slot":"lab-tiles-slot","component":"testOrderedTile","meta":{"name":"testsOrderedTileSlot","title":"Ordered tests"}},{"name":"worklist-tile-component","slot":"lab-tiles-slot","component":"worklistTile","meta":{"name":"worklisTileSlot","title":"Worklist"}},{"name":"completed-tile-component","slot":"lab-tiles-slot","component":"completedTile","meta":{"name":"referredPanleSlot","title":"Referred tests"}},{"name":"declined-tile-component","slot":"lab-panels-slot","component":"declinedLabRequestsTable","meta":{"name":"declinedPanel","title":"Declined tests"}},{"name":"pick-lab-request-action","component":"pickupLabRequestAction","slot":"tests-ordered-actions-slot"},{"name":"reject-lab-request-tests-ordered-action","component":"rejectLabRequestAction","slot":"rejected-ordered-actions-slot"},{"name":"edit-lab-request-tests-ordered-action","component":"editLabRequestAction","slot":"completed-ordered-actions-slot"},{"name":"reject-lab-request-worklist-action","component":"rejectLabRequestAction","slot":"inprogress-tests-actions-slot"},{"name":"add-lab-request-results-action","component":"addLabRequestResultsAction","slot":"inprogress-tests-actions-slot"},{"name":"edit-lab-request-tests-ordered-action","component":"editLabRequestAction","slot":"completed-ordered-actions-slot"}],"version":"1.2.1-pre.590"}

package/e2e/README.md

@@ -0,0 +1,117 @@
+# E2E Tests
+
+This directory contains an E2E test suite using the [Playwright](https://playwright.dev)
+framework.
+
+## Getting Started
+
+Please ensure that you have followed the basic installation guide in the [root README](../README.md). Once everything is set up, make sure the dev server is running by using:
+
+```sh
+yarn start 
+```
+
+Then, in a separate terminal, run:
+
+```sh
+yarn test-e2e --headed
+```
+
+By default, the test suite will run against the http://localhost:8080. You can override this by exporting `E2E_BASE_URL` environment variables beforehand:
+
+```sh
+# Ex: Set the server URL to dev3:
+export E2E_BASE_URL=https://dev3.openmrs.org/openmrs
+
+# Run all e2e tests:
+
+```sh
+yarn test-e2e --headed
+```
+
+To run a specific test by title:
+
+```sh
+yarn test-e2e --headed -g "title of the test"
+```
+
+Read the [e2e testing guide](https://o3-docs.openmrs.org/docs/frontend-modules/end-to-end-testing) to learn more about End-to-End tests in this project.
+
+### Updating Playwright
+
+The Playwright version in the [Bamboo e2e Dockerfile](e2e/support/bamboo/playwright.Dockerfile#L2) and the `package.json` file must match. If you update the Playwright version in one place, you must update it in the other.
+
+## Troubleshooting
+
+If you notice that your local version of the application is not working or that there's a mismatch between what you see locally versus what's in [dev3](https://dev3.openmrs.org/openmrs/spa), you likely have outdated versions of core libraries. To update core libraries, run the following commands:
+
+Check [this documentation](https://playwright.dev/docs/running-tests#command-line) for more running options.  
+
+It is also highly recommended to install the companion VS Code extension:
+https://playwright.dev/docs/getting-started-vscode
+
+## Writing New Tests
+
+In general, it is recommended to read through the official [Playwright docs](https://playwright.dev/docs/intro)
+before writing new test cases. The project uses the official Playwright test runner and,
+generally, follows a very simple project structure:
+
+```
+e2e
+|__ commands
+|   ^ Contains "commands" (simple reusable functions) that can be used in test cases/specs,
+|     e.g. generate a random patient.
+|__ core
+|   ^ Contains code related to the test runner itself, e.g. setting up the custom fixtures.
+|     You probably need to touch this infrequently.
+|__ fixtures
+|   ^ Contains fixtures (https://playwright.dev/docs/test-fixtures) which are used
+|     to run reusable setup/teardown tasks
+|__ pages
+|   ^ Contains page object model classes for interacting with the frontend.
+|     See https://playwright.dev/docs/test-pom for details.
+|__ specs
+|   ^ Contains the actual test cases/specs. New tests should be placed in this folder.
+|__ support
+    ^ Contains support files that requires to run e2e tests, e.g. docker compose files. 
+```
+When you want to write a new test case, start by creating a new spec in `./specs`.
+Depending on what you want to achieve, you might want to create new fixtures and/or
+page object models. To see examples, have a look at the existing code to see how these different concepts play together.
+
+## Open reports from GitHub Actions / Bamboo
+To download the report from the GitHub action/Bamboo plan, follow these steps:
+1. Go to the artifact section of the action/plan and locate the report file.
+2. Download the report file and unzip it using a tool of your choice.
+3. Open the index.html file in a web browser to view the report. 
+The report will show you a full summary of your tests, including information on which 
+tests passed, failed, were skipped, or were flaky. You can filter the report by browser 
+and explore the details of individual tests, including any errors or failures, video 
+recordings, and the steps involved in each test. Simply click on a test to view its details.
+
+## Debugging Tests
+Refer to [this documentation](https://playwright.dev/docs/debug) on how to debug a test.
+
+## Configuration
+This is very much underdeveloped/WIP. At the moment, there exists a (git-shared) `.env`
+file which can be used for configuring certain test attributes. This is most likely
+about to change in the future. Stay tuned for updates!
+
+## Github Actions integration
+The e2e.yml workflow is made up of two jobs: one for running on pull requests (PRs) and
+one for running on commits.
+1. When running on PRs, the workflow will start the dev server, use dev3.openmrs.org as the backend, 
+and run tests only on chromium. This is done in order to quickly provide feedback to the developer. 
+The tests are designed to generate their own data and clean up after themselves once they are finished. 
+This ensures that the tests will have minimum effect from changes made to dev3 by other developers. In the future, we plan to use a docker container to run the tests in an isolated environment once we 
+figure out a way to spin up the container within a small amount of time.
+
+2. When running on commits, the workflow will spin up a docker container and run the dev server against
+it in order to provide a known and isolated environment. In addition, tests will be run on multiple 
+browsers (chromium, firefox, and WebKit) to ensure compatibility.
+
+## Troubleshooting tips
+On MacOS, you might run into the following error:
+```browserType.launch: Executable doesn't exist at /Users/<user>/Library/Caches/ms-playwright/chromium-1015/chrome-mac/Chromium.app/Contents/MacOS/Chromium```
+In order to fix this, you can attempt to force the browser reinstallation by running:
+```PLAYWRIGHT_BROWSERS_PATH=/Users/$USER/Library/Caches/ms-playwright npx playwright install```

package/e2e/commands/encounter-operations.ts

@@ -0,0 +1,63 @@
+import { type APIRequestContext, expect } from '@playwright/test';
+import { type Encounter } from './types';
+import { type Visit } from '@openmrs/esm-framework';
+import dayjs from 'dayjs';
+
+export interface Observation {
+  uuid: string;
+  concept: {
+    uuid: string;
+    display: string;
+    conceptClass: {
+      uuid: string;
+      display: string;
+    };
+  };
+  display: string;
+  groupMembers: null | Array<{
+    uuid: string;
+    concept: {
+      uuid: string;
+      display: string;
+    };
+    value: {
+      uuid: string;
+      display: string;
+    };
+  }>;
+  value: any;
+  obsDatetime: string;
+}
+
+export const createEncounter = async (
+  api: APIRequestContext,
+  patientId: string,
+  providerId: string,
+  visit: Visit,
+): Promise<Encounter> => {
+  const encounterAfterVisit = dayjs(visit.startDatetime).add(1, 'minute');
+  const now = dayjs().subtract(1, 'second');
+  const encounterDatetime = encounterAfterVisit.isBefore(now) ? encounterAfterVisit.format() : now.format();
+  const encounterRes = await api.post('encounter', {
+    data: {
+      encounterDatetime,
+      form: 'c75f120a-04ec-11e3-8780-2b40bef9a44b',
+      patient: patientId,
+      visit: visit.uuid,
+      encounterProviders: [
+        {
+          encounterRole: '240b26f9-dd88-4172-823d-4a8bfeb7841f',
+          provider: providerId,
+        },
+      ],
+      location: process.env.E2E_LOGIN_DEFAULT_LOCATION_UUID,
+      encounterType: '39da3525-afe4-45ff-8977-c53b7b359158',
+    },
+  });
+  await expect(encounterRes.ok()).toBeTruthy();
+  return await encounterRes.json();
+};
+
+export const deleteEncounter = async (api: APIRequestContext, uuid: string) => {
+  await api.delete(`encounter/${uuid}`, { data: {} });
+};

package/e2e/commands/index.ts

@@ -0,0 +1,5 @@
+export * from './patient-operations';
+export * from './visit-operations';
+export * from './provider-operations';
+export * from './encounter-operations';
+export * from './test-order-operations';

package/e2e/commands/patient-operations.ts

@@ -0,0 +1,109 @@
+import { type APIRequestContext, expect } from '@playwright/test';
+
+export interface Patient {
+  uuid: string;
+  identifiers: Identifier[];
+  display: string;
+  person: {
+    uuid: string;
+    display: string;
+    gender: string;
+    age: number;
+    birthdate: string;
+    birthdateEstimated: boolean;
+    dead: boolean;
+    deathDate?: string;
+    causeOfDeath?: string;
+    preferredAddress: {
+      address1: string;
+      cityVillage: string;
+      country: string;
+      postalCode: string;
+      stateProvince: string;
+      countyDistrict: string;
+    };
+    attributes: Array<Record<string, unknown>>;
+    voided: boolean;
+    birthtime?: string;
+    deathdateEstimated: boolean;
+    resourceVersion: string;
+  };
+  attributes: { value: string; attributeType: { uuid: string; display: string } }[];
+  voided: boolean;
+}
+
+export interface Address {
+  preferred: boolean;
+  address1: string;
+  cityVillage: string;
+  country: string;
+  postalCode: string;
+  stateProvince: string;
+}
+
+export interface Identifier {
+  uuid: string;
+  display: string;
+}
+
+export const generateRandomPatient = async (api: APIRequestContext): Promise<Patient> => {
+  const identifierRes = await api.post('idgen/identifiersource/8549f706-7e85-4c1d-9424-217d50a2988b/identifier', {
+    data: {},
+  });
+
+  // eslint-disable-next-line @typescript-eslint/await-thenable
+  await expect(identifierRes.ok()).toBeTruthy();
+  const { identifier } = await identifierRes.json();
+
+  const patientRes = await api.post('patient', {
+    // TODO: This is not configurable right now. It probably should be.
+    data: {
+      identifiers: [
+        {
+          identifier,
+          identifierType: '05a29f94-c0ed-11e2-94be-8c13b969e334',
+          location: '44c3efb0-2583-4c80-a79e-1f756a03c0a1',
+          preferred: true,
+        },
+      ],
+      person: {
+        addresses: [
+          {
+            address1: 'Bom Jesus Street',
+            address2: '',
+            cityVillage: 'Recife',
+            country: 'Brazil',
+            postalCode: '50030-310',
+            stateProvince: 'Pernambuco',
+          },
+        ],
+        attributes: [],
+        birthdate: '2020-2-1',
+        birthdateEstimated: true,
+        dead: false,
+        gender: 'M',
+        names: [
+          {
+            familyName: `Smith${Math.floor(Math.random() * 10000)}`,
+            givenName: `John${Math.floor(Math.random() * 10000)}`,
+            middleName: '',
+            preferred: true,
+          },
+        ],
+      },
+    },
+  });
+
+  // eslint-disable-next-line @typescript-eslint/await-thenable
+  await expect(patientRes.ok()).toBeTruthy();
+  return await patientRes.json();
+};
+
+export const getPatient = async (api: APIRequestContext, uuid: string): Promise<Patient> => {
+  const patientRes = await api.get(`patient/${uuid}?v=full`);
+  return await patientRes.json();
+};
+
+export const deletePatient = async (api: APIRequestContext, uuid: string) => {
+  await api.delete(`patient/${uuid}`, { data: {} });
+};

package/e2e/commands/provider-operations.ts

@@ -0,0 +1,9 @@
+import { type APIRequestContext, expect } from '@playwright/test';
+import { type Provider } from './types';
+
+export const getProvider = async (api: APIRequestContext): Promise<Provider> => {
+  const providerRes = await api.get('provider?q=admin');
+  await expect(providerRes.ok()).toBeTruthy();
+  const { results } = await providerRes.json();
+  return await results[0];
+};

package/e2e/commands/test-order-operations.ts

@@ -0,0 +1,46 @@
+import { type APIRequestContext, expect } from '@playwright/test';
+import { type Order } from '@openmrs/esm-patient-common-lib';
+import { type Encounter } from './types';
+
+export const generateRandomTestOrder = async (
+  api: APIRequestContext,
+  patientId: string,
+  encounter: Encounter,
+  providerUuid: string,
+): Promise<Order> => {
+  const order = await api.post('order', {
+    data: {
+      orderType: '52a447d3-a64a-11e3-9aeb-50e549534c5e',
+      type: 'testorder',
+      action: 'new',
+      accessionNumber: null,
+      urgency: 'ROUTINE',
+      dateActivated: encounter.encounterDatetime,
+      scheduledDate: null,
+      dateStopped: null,
+      autoExpireDate: null,
+      careSetting: '6f0c9a92-6f24-11e3-af88-005056821db0',
+      encounter: encounter,
+      patient: patientId,
+      concept: '887AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA',
+      orderer: providerUuid,
+      frequency: null,
+      orderReason: null,
+      orderReasonNonCoded: 'order reason',
+      instructions: null,
+      commentToFulfiller: null,
+      fulfillerStatus: null,
+      fulfillerComment: null,
+      specimenSource: null,
+      laterality: null,
+      clinicalHistory: null,
+      numberOfRepeats: null,
+    },
+  });
+  await expect(order.ok()).toBeTruthy();
+  return await order.json();
+};
+
+export const deleteTestOrder = async (api: APIRequestContext, uuid: string) => {
+  await api.delete(`order/${uuid}`, { data: {} });
+};

package/e2e/commands/types/index.ts

@@ -0,0 +1,157 @@
+import { type OpenmrsResource } from '@openmrs/esm-framework';
+
+export interface Encounter {
+  uuid: string;
+  encounterDatetime: string;
+  encounterProviders: Array<{
+    uuid: string;
+    display: string;
+    encounterRole: {
+      uuid: string;
+      display: string;
+    };
+    provider: {
+      uuid: string;
+      person: {
+        uuid: string;
+        display: string;
+      };
+    };
+  }>;
+  encounterType: {
+    uuid: string;
+    display: string;
+  };
+  obs: Array<Observation>;
+  orders: Array<Order>;
+}
+
+export interface Observation {
+  uuid: string;
+  concept: {
+    uuid: string;
+    display: string;
+    conceptClass: {
+      uuid: string;
+      display: string;
+    };
+  };
+  display: string;
+  groupMembers: null | Array<{
+    uuid: string;
+    concept: {
+      uuid: string;
+      display: string;
+    };
+    value: {
+      uuid: string;
+      display: string;
+    };
+  }>;
+  value: any;
+  obsDatetime: string;
+}
+
+export interface Order {
+  uuid: string;
+  dateActivated: string;
+  dateStopped?: Date | null;
+  dose: number;
+  dosingInstructions: string | null;
+  dosingType?: 'org.openmrs.FreeTextDosingInstructions' | 'org.openmrs.SimpleDosingInstructions';
+  doseUnits: {
+    uuid: string;
+    display: string;
+  };
+  drug: {
+    uuid: string;
+    name: string;
+    strength: string;
+    display: string;
+  };
+  duration: number;
+  durationUnits: {
+    uuid: string;
+    display: string;
+  };
+  frequency: {
+    uuid: string;
+    display: string;
+  };
+  numRefills: number;
+  orderNumber: string;
+  orderReason: string | null;
+  orderReasonNonCoded: string | null;
+  orderer: {
+    uuid: string;
+    person: {
+      uuid: string;
+      display: string;
+    };
+  };
+  orderType: {
+    uuid: string;
+    display: string;
+  };
+  route: {
+    uuid: string;
+    display: string;
+  };
+  quantity: number;
+  quantityUnits: OpenmrsResource;
+}
+
+export interface Provider {
+  uuid: string;
+  display: string;
+  comments?: string;
+  response?: string;
+  person: OpenmrsResource;
+  name?: string;
+}
+
+export interface Patient {
+  uuid: string;
+  identifiers: Identifier[];
+  display: string;
+  person: {
+    uuid: string;
+    display: string;
+    gender: string;
+    age: number;
+    birthdate: string;
+    birthdateEstimated: boolean;
+    dead: boolean;
+    deathDate?: any;
+    causeOfDeath?: any;
+    preferredAddress: {
+      address1: string;
+      cityVillage: string;
+      country: string;
+      postalCode: string;
+      stateProvince: string;
+      countyDistrict: string;
+    };
+    attributes: any[];
+    voided: boolean;
+    birthtime?: any;
+    deathdateEstimated: boolean;
+    resourceVersion: string;
+  };
+  attributes: { value: string; attributeType: { uuid: string; display: string } }[];
+  voided: boolean;
+}
+
+export interface Address {
+  preferred: boolean;
+  address1: string;
+  cityVillage: string;
+  country: string;
+  postalCode: string;
+  stateProvince: string;
+}
+
+export interface Identifier {
+  uuid: string;
+  display: string;
+}

package/e2e/commands/visit-operations.ts

@@ -0,0 +1,38 @@
+import { type APIRequestContext, expect } from '@playwright/test';
+import { type Visit } from '@openmrs/esm-framework';
+import dayjs from 'dayjs';
+
+export const visitStartDatetime = dayjs().subtract(1, 'D');
+
+export const startVisit = async (api: APIRequestContext, patientId: string): Promise<Visit> => {
+  const visitRes = await api.post('visit', {
+    data: {
+      startDatetime: visitStartDatetime.format('YYYY-MM-DDTHH:mm:ss.SSSZZ'),
+      patient: patientId,
+      location: process.env.E2E_LOGIN_DEFAULT_LOCATION_UUID,
+      visitType: '7b0f5697-27e3-40c4-8bae-f4049abfb4ed',
+      attributes: [],
+    },
+  });
+
+  expect(visitRes.ok()).toBeTruthy();
+  return await visitRes.json();
+};
+
+export const endVisit = async (api: APIRequestContext, visit: Visit) => {
+  const visitRes = await api.post(`visit/${visit.uuid}`, {
+    data: {
+      location: visit.location.uuid,
+      startDatetime: visit.startDatetime,
+      visitType: visit.visitType.uuid,
+      stopDatetime: dayjs().format('YYYY-MM-DDTHH:mm:ss.SSSZZ'),
+    },
+  });
+
+  return await visitRes.json();
+};
+
+export const getVisit = async (api: APIRequestContext, uuid: string): Promise<Visit> => {
+  const visitRes = await api.get(`visit/${uuid}?v=full`);
+  return await visitRes.json();
+};