@openhealth/oht-custom-parser-lib 0.5.20 → 0.5.22
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/service/reportCreator.service.js +7 -19
- package/dist/service/reportCreator.service.js.map +1 -1
- package/dist/types/oht.types.d.ts +3 -3
- package/dist/types/oht.types.js.map +1 -1
- package/dist/util-ts/extractionUtils.js +17 -0
- package/dist/util-ts/extractionUtils.js.map +1 -1
- package/package.json +1 -1
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@@ -139,6 +139,13 @@ async function postDataImportFileUploadToCore(dataImportFileUpload, unknownMeasu
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});
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}
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}
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+
// Ingestion endpoint returns acknowledgment: { message: "Ingestion started", fileUploadId: "..." }
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// Processing (user updates, report creation, READY status) happens asynchronously in background
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// For PROCESSED status, it will automatically:
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// - Create report
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// - Handle LabOrderID version deprecation (if labOrderId is present)
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// - Set status to READY
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// - Trigger all notifications and webhooks
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// Use ingestion endpoint - handles report creation and READY status automatically
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const ingestionResponse = await (0, apiUtils_1.makeApiCallWithRetry)('patch', ohtCoreIngestionUrl, {
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...dataImportFileUpload,
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@@ -150,25 +157,6 @@ async function postDataImportFileUploadToCore(dataImportFileUpload, unknownMeasu
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},
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}, ohtCoreApiKey);
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processingLogger_service_1.processingLogger.logInfo(`Resp: PATCH ingestion status: ${patchStatus} ${ohtCoreIngestionUrl}, filename: ${filename}`, { response: ingestionResponse.data });
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// Ingestion endpoint returns acknowledgment: { message: "Ingestion started", fileUploadId: "..." }
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// Processing (user updates, report creation, READY status) happens asynchronously in background
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// For PROCESSED status, it will automatically:
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// - Create report
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// - Handle LabOrderID version deprecation (if labOrderId is present)
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// - Set status to READY
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// - Trigger all notifications and webhooks
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-
if (!isReportParsedCorrectly || rejectedStatus !== undefined) {
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processingLogger_service_1.processingLogger.addWarning(`Report not parsed correctly fileUploadID ${dataImportFileUpload.id}, filename: ${filename}`, `report_creator`, {
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warningType: 'oht_core_ingestion_rejected',
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warningCategory: 'ingestion',
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warningSeverity: 'critical',
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data: {
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is_report_parsed_correctly: isReportParsedCorrectly,
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rejected_status: rejectedStatus,
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ingestion_response: ingestionResponse.data,
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},
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});
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}
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// Return null since ingestion is asynchronous and we don't have the updated file upload object
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// The caller should not rely on the returned value for status checking
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return null;
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"reportCreator.service.js","sourceRoot":"","sources":["../../service/reportCreator.service.ts"],"names":[],"mappings":";;;;;
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1
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{"version":3,"file":"reportCreator.service.js","sourceRoot":"","sources":["../../service/reportCreator.service.ts"],"names":[],"mappings":";;;;;AAsTS,wEAA8B;AAAE,0DAAuB;AAtThE,kDAQ4B;AAE5B,yEAA8D;AAE9D,oDAA4B;AAC5B,oDAAoH;AACpH,kDAA0E;AAC1E,gBAAM,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,YAAY,EAAE,CAAC,CAAC;AAEtC,MAAM,YAAY,GAAG,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC;AAE9C;;;GAGG;AACH,KAAK,UAAU,uBAAuB,CACpC,eAAuB,EACvB,YAA2B,EAC3B,mBAAyC,EACzC,QAAgB,EAChB,YAA4B,EAC5B,SAAiB,EACjB,uBAAgC,EAChC,KAAa,EACb,aAAqB;IAErB,IAAI,CAAC,YAAY,EAAE,CAAC;QAClB,MAAM,IAAI,KAAK,CACb,iEAAiE,QAAQ,EAAE,CAC5E,CAAC;IACJ,CAAC;IAED,IAAI,MAAM,GAAG,uBAAuB;QAClC,CAAC,CAAC,sCAA0B,CAAC,KAAK;QAClC,CAAC,CAAC,sCAA0B,CAAC,UAAU,CAAC;IAE1C,MAAM,MAAM,GAAG,GAAG,YAAY,sBAAsB,eAAe,EAAE,CAAC;IAEtE,mCAAmC;IACnC,IAAI,YAAY,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC5B,IAAI,CAAC;YACH,MAAM,IAAA,8CAAkC,EACtC,SAAS,EACT,YAAY,EACZ,aAAa,CACd,CAAC;QACJ,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,2CAAgB,CAAC,QAAQ,CACvB,qDAAqD,QAAQ,EAAE,EAC/D,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,EACzD;gBACE,KAAK,EAAE,IAAA,wBAAa,EAAC,KAAK,CAAC;gBAC3B,SAAS,EAAE,SAAS;gBACpB,iBAAiB,EAAE,YAAY,CAAC,MAAM;aACvC,CACF,CAAC;QACJ,CAAC;IACH,CAAC;IAED,wDAAwD;IACxD,MAAM,WAAW,GAAG;QAClB,MAAM,EAAE,MAAM;QACd,YAAY,EAAE,YAAY,IAAI,EAAE;QAChC,mBAAmB,EAAE,mBAAmB,IAAI,EAAE;QAC9C,KAAK,EAAE,KAAK;KACb,CAAC;IAEF,2CAAgB,CAAC,OAAO,CACtB,oEAAoE,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC,MAAM,kBAAkB,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,MAAM,oCAAoC,QAAQ,EAAE,EACjM;QACE,QAAQ;QACR,iBAAiB,EAAE,eAAe;QAClC,kBAAkB,EAAE,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC,MAAM;QAC/C,0BAA0B,EAAE,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,MAAM;QAC9D,OAAO,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,EAAE;KACzC,CACF,CAAC;IAEF,IAAI,CAAC;QACH,MAAM,QAAQ,GAAG,MAAM,IAAA,+BAAoB,EACzC,MAAM,EACN,MAAM,EACN,WAAW,EACX,aAAa,CACd,CAAC;QAEF,MAAM,YAAY,GAAG,QAAQ,EAAE,IAAI,CAAC;QACpC,2CAAgB,CAAC,OAAO,CACtB,8EAA8E,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC,MAAM,kBAAkB,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,MAAM,oCAAoC,QAAQ,EAAE,EAC3M;YACE,QAAQ;YACR,iBAAiB,EAAE,eAAe;YAClC,kBAAkB,EAAE,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC,MAAM;YAC/C,0BAA0B,EAAE,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,MAAM;YAC9D,WAAW,EAAE,QAAQ,EAAE,MAAM;YAC7B,gBAAgB,EAAE,OAAO,YAAY,EAAE,OAAO,KAAK,QAAQ,CAAC,CAAC,CAAC,YAAY,CAAC,OAAO,CAAC,CAAC,CAAC,SAAS;YAC9F,eAAe,EAAE,YAAY,EAAE,MAAM;YACrC,QAAQ,EAAE,OAAO,CAAC,KAAK,EAAE,IAAI,EAAE,CAAC;SACjC,CACF,CAAC;IACJ,CAAC;IAAC,OAAO,QAAQ,EAAE,CAAC;QAClB,2CAAgB,CAAC,QAAQ,CACvB,qFAAqF,QAAQ,EAAE,EAC/F,QAAQ,YAAY,KAAK,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,SAAS,EAChD;YACE,QAAQ;YACR,iBAAiB,EAAE,eAAe;YAClC,kBAAkB,EAAE,CAAC,YAAY,IAAI,EAAE,CAAC,CAAC,MAAM;YAC/C,0BAA0B,EAAE,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,MAAM;YAC9D,aAAa,EAAE,IAAA,wBAAa,EAAC,QAAe,CAAC;YAC7C,aAAa,EAAG,IAAA,wBAAa,EAAC,QAAe,CAAS,CAAC,YAAY;SACpE,CACF,CAAC;QAEF,uCAAuC;QACvC,MAAM,QAAQ,CAAC;IACjB,CAAC;AACH,CAAC;AAED,KAAK,UAAU,8BAA8B,CAC3C,oBAA0C,EAC1C,mBAA4C,EAC5C,YAA4B,EAC5B,cAAkC,EAClC,YAAgC,EAChC,uBAAgC,EAChC,QAAgB,EAChB,aAAqB;IAErB,IAAI,MAAM,GAAG,uBAAuB;QAClC,CAAC,CAAC,sCAA0B,CAAC,SAAS;QACtC,CAAC,CAAC,sCAA0B,CAAC,UAAU,CAAC;IAE1C,MAAM,WAAW,GAAG,cAAc,IAAI,MAAM,CAAC;IAC7C,MAAM,mBAAmB,GAAG,GAAG,YAAY,oBAAoB,oBAAoB,CAAC,EAAE,YAAY,CAAC;IACnG,MAAM,wBAAwB,GAAG,GAAG,YAAY,oBAAoB,oBAAoB,CAAC,EAAE,iBAAiB,CAAC;IAE7G,yEAAyE;IACzE,MAAM,cAAc,GAAG,GAAG,YAAY,4CAA4C,oBAAoB,CAAC,EAAE,EAAE,CAAC;IAC5G,MAAM,mBAAmB,GAAG,MAAM,IAAA,+BAAoB,EACpD,KAAK,EACL,cAAc,EACd,IAAI,EACJ,aAAa,CACd,CAAC;IAEF,2CAAgB,CAAC,OAAO,CACtB,8DAA8D,oBAAoB,CAAC,EAAE,eAAe,QAAQ,EAAE,EAC9G,EAAE,QAAQ,EAAE,mBAAmB,CAAC,IAAI,EAAE,CACvC,CAAC;IAEF,IAAI,CAAC,mBAAmB,EAAE,IAAI,EAAE,WAAW,EAAE,CAAC;QAC5C,2CAAgB,CAAC,QAAQ,CACvB,qEAAqE,oBAAoB,CAAC,EAAE,eAAe,QAAQ,EAAE,EACrH,SAAS,EACT,EAAE,QAAQ,EAAE,mBAAmB,EAAE,IAAI,EAAE,CACxC,CAAC;QACF,MAAM,IAAI,KAAK,CAAC,0CAA0C,oBAAoB,CAAC,EAAE,EAAE,CAAC,CAAC;IACvF,CAAC;IAED,MAAM,WAAW,GAAG,mBAAmB,CAAC,IAAI,CAAC,WAAW,CAAC;IAEzD,2CAA2C;IAC3C,MAAM,WAAW,GAAG;QAClB,SAAS,EAAE,oBAAoB,EAAE,WAAW,EAAE,SAAS,IAAI,EAAE;QAC7D,QAAQ,EAAE,oBAAoB,EAAE,WAAW,EAAE,QAAQ,IAAI,EAAE;QAC3D,KAAK,EAAE,oBAAoB,EAAE,WAAW,EAAE,KAAK,IAAI,EAAE;QACrD,SAAS,EAAE,oBAAoB,EAAE,WAAW,EAAE,SAAS,IAAI,IAAI;QAC/D,kEAAkE;QAClE,GAAG,EAAE,oBAAoB,EAAE,WAAW,EAAE,GAAG,IAAI,EAAE;QACjD,GAAG,EAAE,oBAAoB,EAAE,WAAW,EAAE,GAAG,IAAI,IAAI;QACnD,MAAM,EAAE,oBAAoB,EAAE,WAAW,EAAE,MAAM,IAAI,IAAI;QACzD,UAAU,EAAE,oBAAoB,EAAE,WAAW,EAAE,UAAU,IAAI,EAAE;KAChE,CAAC;IAEF,MAAM,OAAO,GAAG,GAAG,YAAY,kBAAkB,WAAW,EAAE,CAAC;IAC/D,MAAM,YAAY,GAAG,MAAM,IAAA,+BAAoB,EAC7C,OAAO,EACP,OAAO,EACP,WAAW,EACX,aAAa,CACd,CAAC;IAEF,2CAAgB,CAAC,OAAO,CACtB,8BAA8B,WAAW,eAAe,QAAQ,EAAE,EAClE,EAAE,QAAQ,EAAE,YAAY,CAAC,IAAI,EAAE,CAChC,CAAC;IAEF,IAAI,CAAC;QACH,6DAA6D;QAC7D,IAAI,mBAAmB,CAAC,eAAe,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACnD,IAAI,CAAC;gBACH,MAAM,IAAA,oDAAwC,EAC5C,oBAAoB,CAAC,SAAS,EAC9B,mBAAmB,EACnB,aAAa,CACd,CAAC;gBACF,2CAAgB,CAAC,OAAO,CACtB,+DAA+D,QAAQ,EAAE,EACzE;oBACE,UAAU,EAAE,oBAAoB,CAAC,SAAS;oBAC1C,0BAA0B,EAAE,mBAAmB,CAAC,eAAe,CAAC,MAAM;iBACvE,CACF,CAAC;YACJ,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACf,2CAAgB,CAAC,QAAQ,CACvB,4DAA4D,QAAQ,EAAE,EACtE,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,SAAS,EAC1C;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@@ -149,6 +149,7 @@ export type DataImportFileUpload = {
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reportExternalId?: string;
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documentFingerprint?: string;
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labOrderId?: string;
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prescriberExternalId?: string;
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};
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export interface Measurement {
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biomarkerId: number;
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documentDate: string;
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/** PDF in format base64 */
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pdfBase64?: string;
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/** prescribing doctor externalId */
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prescriberExternalId?: string;
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}
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export interface OhtPatient {
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/** REQUIRED: Patient unique identifier. Must be a non-empty string. */
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fullName: string;
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shortName: string;
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abbreviationName: string;
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key: string;
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aliasNames: NameAlias[];
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standardUnit: string;
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alternativeUnits: AlternativeUnit[];
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longDescription: string;
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shortDescription: string;
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defaultType: string;
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priority: string;
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@@ -398,7 +399,6 @@ export type BiomarkerAcf = {
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manualCheck: ManualCheck;
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genericDisclaimerText: string;
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genericDisclaimerLogic: AcfBiomarkerGenericDisclaimerLogic;
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customCompatibilityDescription: string;
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visualRanges: VisualRange[];
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displayDecimals: number;
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plausibilityRangeCheck: number;
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{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;
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+
{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;AAqVA,IAAY,GAIX;AAJD,WAAY,GAAG;IACb,oBAAa,CAAA;IACb,wBAAiB,CAAA;IACjB,sBAAe,CAAA;AACjB,CAAC,EAJW,GAAG,mBAAH,GAAG,QAId;AAED,IAAY,UAGX;AAHD,WAAY,UAAU;IACpB,qDAAuC,CAAA;IACvC,6BAAe,CAAA;AACjB,CAAC,EAHW,UAAU,0BAAV,UAAU,QAGrB;AAED,IAAY,0BAYX;AAZD,WAAY,0BAA0B;IACpC,mDAAqB,CAAA;IACrB,iDAAmB,CAAA;IACnB,uDAAyB,CAAA;IACzB,uDAAyB,CAAA;IACzB,qDAAuB,CAAA;IACvB,qDAAuB,CAAA;IACvB,6CAAe,CAAA;IACf,iDAAmB,CAAA;IACnB,mDAAqB,CAAA;IACrB,mDAAqB,CAAA;IACrB,2DAA6B,CAAA;AAC/B,CAAC,EAZW,0BAA0B,0CAA1B,0BAA0B,QAYrC;AAED,IAAY,kBAGX;AAHD,WAAY,kBAAkB;IAC5B,uDAAiC,CAAA;IACjC,6CAAuB,CAAA;AACzB,CAAC,EAHW,kBAAkB,kCAAlB,kBAAkB,QAG7B;AAED,IAAY,0BAIX;AAJD,WAAY,0BAA0B;IACpC,6CAAe,CAAA;IACf,2DAA6B,CAAA;IAC7B,qDAAuB,CAAA;AACzB,CAAC,EAJW,0BAA0B,0CAA1B,0BAA0B,QAIrC;AAED,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,yCAAmB,CAAA;IACnB,+CAAyB,CAAA;IACzB,mCAAa,CAAA;IACb,qCAAe,CAAA;IACf,2CAAqB,CAAA;AACvB,CAAC,EAPW,kBAAkB,kCAAlB,kBAAkB,QAO7B;AAED,IAAY,YASX;AATD,WAAY,YAAY;IACtB,6CAA6B,CAAA;IAC7B,mDAAmC,CAAA;IACnC,yDAAyC,CAAA;IACzC,2DAA2C,CAAA;IAC3C,2DAA2C,CAAA;IAC3C,+DAA+C,CAAA;IAC/C,2DAA2C,CAAA;IAC3C,mDAAmC,CAAA;AACrC,CAAC,EATW,YAAY,4BAAZ,YAAY,QASvB;AAED,IAAY,YAoBX;AApBD,WAAY,YAAY;IACtB,mFAAmE,CAAA;IACnE,uDAAuC,CAAA;IACvC,+DAA+C,CAAA;IAC/C,mDAAmC,CAAA;IACnC,iEAAiD,CAAA;IACjD,uDAAuC,CAAA;IACvC,uDAAuC,CAAA;IACvC,6DAA6C,CAAA;IAC7C,2EAA2D,CAAA;IAC3D,2DAA2C,CAAA;IAC3C,uEAAuD,CAAA;IACvD,yDAAyC,CAAA;IACzC,uEAAuD,CAAA;IACvD,iEAAiD,CAAA;IACjD,oHAAoG,CAAA;IACpG,wFAAwF;IACxF,uEAAuD,CAAA;IACvD,gGAAgG;IAChG,6HAA6G,CAAA;AAC/G,CAAC,EApBW,YAAY,4BAAZ,YAAY,QAoBvB;AA0CD,IAAY,YAIX;AAJD,WAAY,YAAY;IACtB,+BAAe,CAAA;IACf,iCAAiB,CAAA;IACjB,2BAAW,CAAA;AACb,CAAC,EAJW,YAAY,4BAAZ,YAAY,QAIvB;AAsCD,IAAY,kBAIX;AAJD,WAAY,kBAAkB;IAC5B,6CAAuB,CAAA;IACvB,2CAAqB,CAAA;IACrB,uDAAiC,CAAA;AACnC,CAAC,EAJW,kBAAkB,kCAAlB,kBAAkB,QAI7B;AAED,IAAY,sBAOX;AAPD,WAAY,sBAAsB;IAChC,+CAAqB,CAAA;IACrB,+CAAqB,CAAA;IACrB,4EAAkD,CAAA;IAClD,4EAAkD,CAAA;IAClD,4DAAkC,CAAA;IAClC,2CAAiB,CAAA;AACnB,CAAC,EAPW,sBAAsB,sCAAtB,sBAAsB,QAOjC;AAED,IAAY,WAGX;AAHD,WAAY,WAAW;IACrB,wBAAS,CAAA;IACT,sCAAuB,CAAA;AACzB,CAAC,EAHW,WAAW,2BAAX,WAAW,QAGtB;AAED,IAAY,kCAGX;AAHD,WAAY,kCAAkC;IAC5C,6DAAuB,CAAA;IACvB,iEAA2B,CAAA;AAC7B,CAAC,EAHW,kCAAkC,kDAAlC,kCAAkC,QAG7C;AAED,IAAY,gCAMX;AAND,WAAY,gCAAgC;IAC1C,2DAAuB,CAAA;IACvB,6EAAyC,CAAA;IACzC,+EAA2C,CAAA;IAC3C,2FAAuD,CAAA;IACvD,uFAAmD,CAAA;AACrD,CAAC,EANW,gCAAgC,gDAAhC,gCAAgC,QAM3C"}
|
|
@@ -318,6 +318,23 @@ function parseRange(exam, patientInfo) {
|
|
|
318
318
|
if (fromTrimmed === '0' && toTrimmed === '0' && textTrimmed === '0') {
|
|
319
319
|
return { from: 0, to: 0, isRangeParsedCorrectly: true };
|
|
320
320
|
}
|
|
321
|
+
if (fromTrimmed !== '' || toTrimmed !== '') {
|
|
322
|
+
let fromNum = null;
|
|
323
|
+
let toNum = null;
|
|
324
|
+
if (fromTrimmed !== '') {
|
|
325
|
+
const n = parsePtNumber(fromTrimmed);
|
|
326
|
+
if (!isNaN(n))
|
|
327
|
+
fromNum = n;
|
|
328
|
+
}
|
|
329
|
+
if (toTrimmed !== '') {
|
|
330
|
+
const n = parsePtNumber(toTrimmed);
|
|
331
|
+
if (!isNaN(n))
|
|
332
|
+
toNum = n;
|
|
333
|
+
}
|
|
334
|
+
if (fromNum !== null || toNum !== null) {
|
|
335
|
+
return { from: fromNum, to: toNum, isRangeParsedCorrectly: true };
|
|
336
|
+
}
|
|
337
|
+
}
|
|
321
338
|
const result = tryParseFromText(range.text);
|
|
322
339
|
if (result.isRangeParsedCorrectly)
|
|
323
340
|
return result;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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1
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+
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