@openhealth/oht-custom-parser-lib 0.2.64 → 0.2.65
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.d.ts +1 -1
- package/dist/index.js +3 -1
- package/dist/index.js.map +1 -1
- package/dist/service/auxiliaryFunctions.service.d.ts +2 -2
- package/dist/service/auxiliaryFunctions.service.js +15 -2
- package/dist/service/auxiliaryFunctions.service.js.map +1 -1
- package/dist/types/oht.types.d.ts +13 -1
- package/dist/types/oht.types.js +14 -1
- package/dist/types/oht.types.js.map +1 -1
- package/package.json +1 -1
package/dist/index.d.ts
CHANGED
|
@@ -5,7 +5,7 @@ export { getSlackFileIssueNotificationMessage, sendMessageToSlack } from './serv
|
|
|
5
5
|
export { aggregateMessages, aggregateBiMessages, publishToTopic, generateBIMessages } from './service/errorHandling.service';
|
|
6
6
|
export { applyRules as applyTransformationRules, validateJsonataExpression as validateTransformationRuleExpression, } from './service/transformationRules.service';
|
|
7
7
|
export { LabToOhtContract, LabToOhtMapper, UnknownMeasurementExtraction, ReferenceAsAnnotation, UnitExtraction, RangeExtraction, RangeExtractionResponse, ValueExtraction, unitSynonyms, ValueExtractionResponse, SynonymUnit, UnknownUnits, } from './types/custom-parser.types';
|
|
8
|
-
export { AcfBiomarkerRangeAnnotationCheck, AcfBiomarkerGenericDisclaimerLogic, ManualCheck, BiomarkerCompatibility, ReferenceRangeType, AcfReferenceRange, VisualRange, NameAlias, AlternativeUnit, BiomarkerAcf, Biomarker, PipelineStep, DigitizationStatus, MeasurementValueComparator, BiomarkerValueType, DataImportFileUploadStatus, Sex, Digitization, PatientInfo, UnknownMeasurement, Measurement, DataImportFileUpload, MessagePayload, SignedUpload, ReportStyleConfig, LanguageCode, BiomarkerCustomisation, PartnerCustomPanel, ReportDisplaySettings, ReportCustomisation, OHTPartner, UploadType, } from './types/oht.types';
|
|
8
|
+
export { AcfBiomarkerRangeAnnotationCheck, AcfBiomarkerGenericDisclaimerLogic, ManualCheck, BiomarkerCompatibility, ReferenceRangeType, AcfReferenceRange, VisualRange, NameAlias, AlternativeUnit, BiomarkerAcf, Biomarker, PipelineStep, DigitizationStatus, MeasurementValueComparator, BiomarkerValueType, DataImportFileUploadStatus, Sex, Digitization, PatientInfo, UnknownMeasurement, Measurement, DataImportFileUpload, MessagePayload, SignedUpload, ReportStyleConfig, LanguageCode, BiomarkerCustomisation, PartnerCustomPanel, ReportDisplaySettings, ReportCustomisation, OHTPartner, UploadType, RejectReason, } from './types/oht.types';
|
|
9
9
|
export { ErrorMessage } from './types/error.types';
|
|
10
10
|
export type { TransformationRule, TransformationContext, ApplyRulesResult as TransformationApplyRulesResult, ApplyRulesOptions as TransformationApplyRulesOptions, ValidationResult as TransformationValidationResult, } from './types/transformationRules.types';
|
|
11
11
|
export { makeApiCallWithRetry, parseErrorObj } from './util-ts/apiUtils';
|
package/dist/index.js
CHANGED
|
@@ -3,7 +3,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
3
3
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
exports.
|
|
6
|
+
exports.getLowerThanPatterns = exports.getGreaterThanPatterns = exports.pinoLogger = exports.uploadFileBufferToGCS = exports.readFileFromBucket = exports.resolveUnitFromSynonyms = exports.fetchSynonymUnits = exports.processAppendedMappings = exports.isBiomarkerExternalNoVisualRange = exports.isBiomarkerValueNumerical = exports.extractValue = exports.parseErrorObj = exports.makeApiCallWithRetry = exports.RejectReason = exports.UploadType = exports.Sex = exports.DataImportFileUploadStatus = exports.BiomarkerValueType = exports.MeasurementValueComparator = exports.DigitizationStatus = exports.PipelineStep = exports.ReferenceRangeType = exports.BiomarkerCompatibility = exports.ManualCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.AcfBiomarkerRangeAnnotationCheck = exports.unitSynonyms = exports.validateTransformationRuleExpression = exports.applyTransformationRules = exports.generateBIMessages = exports.publishToTopic = exports.aggregateBiMessages = exports.aggregateMessages = exports.sendMessageToSlack = exports.getSlackFileIssueNotificationMessage = exports.extractValueFromGreaterLowerThan = exports.extractUnit = exports.getRangeFromPositionAndRegex = exports.parseExamValue = exports.extractReferenceAnnotation = exports.extractReferenceRanges = exports.checkValueForPlausibleValues = exports.ohtMeasurementsExtractor = exports.postFileUploadSetStatus = exports.queryFileUploadsWithFilters = exports.handleRejection = exports.isPatientAgeValid = exports.parseGender = exports.parseExternalPatientId = exports.postDataImportFileUploadToCore = void 0;
|
|
7
|
+
exports.getMappedBiomarkers = void 0;
|
|
7
8
|
// ### SERVICES ###
|
|
8
9
|
var reportCreator_service_1 = require("./service/reportCreator.service");
|
|
9
10
|
Object.defineProperty(exports, "postDataImportFileUploadToCore", { enumerable: true, get: function () { return reportCreator_service_1.postDataImportFileUploadToCore; } });
|
|
@@ -50,6 +51,7 @@ Object.defineProperty(exports, "BiomarkerValueType", { enumerable: true, get: fu
|
|
|
50
51
|
Object.defineProperty(exports, "DataImportFileUploadStatus", { enumerable: true, get: function () { return oht_types_1.DataImportFileUploadStatus; } });
|
|
51
52
|
Object.defineProperty(exports, "Sex", { enumerable: true, get: function () { return oht_types_1.Sex; } });
|
|
52
53
|
Object.defineProperty(exports, "UploadType", { enumerable: true, get: function () { return oht_types_1.UploadType; } });
|
|
54
|
+
Object.defineProperty(exports, "RejectReason", { enumerable: true, get: function () { return oht_types_1.RejectReason; } });
|
|
53
55
|
// ### UTIL-TS ###
|
|
54
56
|
var apiUtils_1 = require("./util-ts/apiUtils");
|
|
55
57
|
Object.defineProperty(exports, "makeApiCallWithRetry", { enumerable: true, get: function () { return apiUtils_1.makeApiCallWithRetry; } });
|
package/dist/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../index.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../index.ts"],"names":[],"mappings":";;;;;;;AAAA,mBAAmB;AACnB,yEAEyC;AADvC,uIAAA,8BAA8B,OAAA;AAEhC,mFAQ8C;AAP5C,oIAAA,sBAAsB,OAAA;AACtB,yHAAA,WAAW,OAAA;AACX,+HAAA,iBAAiB,OAAA;AACjB,6HAAA,eAAe,OAAA;AACf,yIAAA,2BAA2B,OAAA;AAC3B,qIAAA,uBAAuB,OAAA;AAIzB,+FASoD;AARlD,4IAAA,wBAAwB,OAAA;AACxB,gJAAA,4BAA4B,OAAA;AAC5B,0IAAA,sBAAsB,OAAA;AACtB,8IAAA,0BAA0B,OAAA;AAC1B,kIAAA,cAAc,OAAA;AACd,gJAAA,4BAA4B,OAAA;AAC5B,+HAAA,WAAW,OAAA;AACX,oJAAA,gCAAgC,OAAA;AAElC,yEAEyC;AADvC,6IAAA,oCAAoC,OAAA;AAAE,2HAAA,kBAAkB,OAAA;AAE1D,yEAKyC;AAJvC,0HAAA,iBAAiB,OAAA;AACjB,4HAAA,mBAAmB,OAAA;AACnB,uHAAA,cAAc,OAAA;AACd,2HAAA,kBAAkB,OAAA;AAEpB,qFAG+C;AAF7C,uIAAA,UAAU,OAA4B;AACtC,mJAAA,yBAAyB,OAAwC;AAGnE,gBAAgB;AAChB,mEAaqC;AAJnC,mHAAA,YAAY,OAAA;AAKd,+CAkC2B;AAjCzB,6HAAA,gCAAgC,OAAA;AAChC,+HAAA,kCAAkC,OAAA;AAClC,wGAAA,WAAW,OAAA;AACX,mHAAA,sBAAsB,OAAA;AACtB,+GAAA,kBAAkB,OAAA;AAOlB,yGAAA,YAAY,OAAA;AACZ,+GAAA,kBAAkB,OAAA;AAClB,uHAAA,0BAA0B,OAAA;AAC1B,+GAAA,kBAAkB,OAAA;AAClB,uHAAA,0BAA0B,OAAA;AAC1B,gGAAA,GAAG,OAAA;AAeH,uGAAA,UAAU,OAAA;AACV,yGAAA,YAAY,OAAA;AAWd,kBAAkB;AAClB,+CAAuE;AAA/D,gHAAA,oBAAoB,OAAA;AAAE,yGAAA,aAAa,OAAA;AAC3C,iDAAmL;AAA3K,yGAAA,YAAY,OAAA;AAAE,sHAAA,yBAAyB,OAAA;AAAE,6HAAA,gCAAgC,OAAA;AAAE,oHAAA,uBAAuB,OAAA;AAAE,8GAAA,iBAAiB,OAAA;AAAE,oHAAA,uBAAuB,OAAA;AACtJ,mEAAuF;AAA/E,wHAAA,kBAAkB,OAAA;AAAE,2HAAA,qBAAqB,OAAA;AACjD,mDAA2D;AAAnD,yHAAA,OAAO,OAAc;AAC7B,mDAAkF;AAA1E,oHAAA,sBAAsB,OAAA;AAAE,kHAAA,oBAAoB,OAAA;AACpD,iDAA0D;AAAlD,gHAAA,mBAAmB,OAAA"}
|
|
@@ -1,5 +1,5 @@
|
|
|
1
1
|
import { ErrorMessage } from '../types/error.types';
|
|
2
|
-
import { DataImportFileUpload, DataImportFileUploadStatus, DigitizationStatus, PipelineStep, Sex } from "../types/oht.types";
|
|
2
|
+
import { DataImportFileUpload, DataImportFileUploadStatus, DigitizationStatus, PipelineStep, RejectReason, Sex } from "../types/oht.types";
|
|
3
3
|
import dayjs from 'dayjs';
|
|
4
4
|
import { TransformationRulesChains } from "../types/custom-parser.types";
|
|
5
5
|
declare function getPatientAge(documentDate?: Date, patientBirthdate?: Date): number | null;
|
|
@@ -11,7 +11,7 @@ declare function parseGender(patientGender?: string): {
|
|
|
11
11
|
};
|
|
12
12
|
declare function handleRejection(parseType: string, errorMessages: ErrorMessage[]): {
|
|
13
13
|
rejectedStatus: string;
|
|
14
|
-
rejectReason:
|
|
14
|
+
rejectReason: RejectReason.INVALID_DATA_NO_BIOMARKER_DATA | RejectReason.MISSING_EXAM_DATE | RejectReason.UNSUPPORTED_UPLOAD | RejectReason.INCOMPLETE_DATA;
|
|
15
15
|
};
|
|
16
16
|
export interface FileUploadFilter {
|
|
17
17
|
field: string;
|
|
@@ -57,10 +57,23 @@ function parseGender(patientGender) {
|
|
|
57
57
|
}
|
|
58
58
|
function handleRejection(parseType, errorMessages) {
|
|
59
59
|
let rejectedStatus = 'REJECTED';
|
|
60
|
-
|
|
60
|
+
// Map parseType to appropriate RejectReason
|
|
61
|
+
// Default to INVALID_DATA_NO_BIOMARKER_DATA for parsing failures
|
|
62
|
+
let rejectReason = oht_types_1.RejectReason.INVALID_DATA_NO_BIOMARKER_DATA;
|
|
63
|
+
// Map specific parse types to more specific reject reasons if applicable
|
|
64
|
+
const lowerParseType = parseType.toLowerCase();
|
|
65
|
+
if (lowerParseType.includes('date') || lowerParseType.includes('exam date')) {
|
|
66
|
+
rejectReason = oht_types_1.RejectReason.MISSING_EXAM_DATE;
|
|
67
|
+
}
|
|
68
|
+
else if (lowerParseType.includes('unit') || lowerParseType.includes('incomplete')) {
|
|
69
|
+
rejectReason = oht_types_1.RejectReason.INCOMPLETE_DATA;
|
|
70
|
+
}
|
|
71
|
+
else if (lowerParseType.includes('unsupported') || lowerParseType.includes('format')) {
|
|
72
|
+
rejectReason = oht_types_1.RejectReason.UNSUPPORTED_UPLOAD;
|
|
73
|
+
}
|
|
61
74
|
errorMessages.push({
|
|
62
75
|
destination: { slack: true, notes: false, bi: false },
|
|
63
|
-
message: `File REJECTED, ${parseType} not parsed correctly
|
|
76
|
+
message: `File REJECTED, ${parseType} not parsed correctly. Reason: ${rejectReason}`,
|
|
64
77
|
});
|
|
65
78
|
return { rejectedStatus, rejectReason };
|
|
66
79
|
}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"auxiliaryFunctions.service.js","sourceRoot":"","sources":["../../service/auxiliaryFunctions.service.ts"],"names":[],"mappings":";;;;;
|
|
1
|
+
{"version":3,"file":"auxiliaryFunctions.service.js","sourceRoot":"","sources":["../../service/auxiliaryFunctions.service.ts"],"names":[],"mappings":";;;;;AAgPE,wDAAsB;AACtB,kCAAW;AACX,8CAAiB;AACjB,sCAAa;AACb,0CAAe;AACf,kEAA2B;AAC3B,0DAAuB;AACvB,sEAA6B;AAvP/B,2DAAmC;AAEnC,kDAAyD;AACzD,uEAA+C;AAC/C,kDAA+M;AAC/M,kDAA0B;AAC1B,uFAA+D;AAC/D,2DAAmC;AAInC,eAAK,CAAC,MAAM,CAAC,2BAAiB,CAAC,CAAC;AAChC,eAAK,CAAC,MAAM,CAAC,aAAG,CAAC,CAAC;AAElB,MAAM,MAAM,GAAG,IAAA,oBAAU,GAAE,CAAC;AAE5B,MAAM,YAAY,GAAG,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC;AAE9C,SAAS,aAAa,CAAC,YAAmB,EAAE,gBAAuB;IAC/D,IAAI,CAAC,gBAAgB,IAAI,CAAC,YAAY;QAAE,OAAO,IAAI,CAAC;IAEpD,2DAA2D;IAC3D,MAAM,OAAO,GAAG,IAAA,gBAAM,EAAC,YAAY,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;IACpD,MAAM,SAAS,GAAG,IAAA,gBAAM,EAAC,gBAAgB,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;IAE1D,OAAO,OAAO,CAAC,IAAI,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;AAC5C,CAAC;AAED,SAAS,iBAAiB,CAAC,YAAmB,EAAE,gBAAuB;IACnE,MAAM,UAAU,GAAG,aAAa,CAAC,YAAY,EAAE,gBAAgB,CAAC,CAAC;IAEjE,IAAI,UAAU,KAAK,IAAI,EAAE,CAAC;QACtB,OAAO,KAAK,CAAC;IACjB,CAAC;IAED,OAAO,UAAU,IAAI,EAAE,IAAI,UAAU,IAAI,GAAG,CAAC;AACjD,CAAC;AAED,SAAS,sBAAsB,CAAC,iBAA0B;IACtD,OAAO,iBAAiB,KAAK,SAAS,IAAI,iBAAiB,CAAC,MAAM,GAAG,CAAC,CAAC;AAC3E,CAAC;AAED,SAAS,WAAW,CAAC,aAAsB;IACvC,MAAM,MAAM,GAAG,aAAa,EAAE,WAAW,EAAE,CAAC;IAE5C,QAAQ,MAAM,EAAE,CAAC;QACb,KAAK,GAAG,CAAC;QACT,KAAK,WAAW,CAAC;QACjB,KAAK,MAAM;YACP,OAAO,EAAE,GAAG,EAAE,eAAG,CAAC,IAAI,EAAE,uBAAuB,EAAE,IAAI,EAAE,CAAC;QAC5D,KAAK,GAAG,CAAC;QACT,KAAK,UAAU,CAAC;QAChB,KAAK,QAAQ;YACT,OAAO,EAAE,GAAG,EAAE,eAAG,CAAC,MAAM,EAAE,uBAAuB,EAAE,IAAI,EAAE,CAAC;QAC9D;YACI,OAAO,EAAE,GAAG,EAAE,eAAG,CAAC,KAAK,EAAE,uBAAuB,EAAE,KAAK,EAAE,CAAC;IAClE,CAAC;AACL,CAAC;AAED,SAAS,eAAe,CAAC,SAAiB,EAAE,aAA6B;IACrE,IAAI,cAAc,GAAG,UAAU,CAAC;IAChC,4CAA4C;IAC5C,iEAAiE;IACjE,IAAI,YAAY,GAAG,wBAAY,CAAC,8BAA8B,CAAC;IAE/D,yEAAyE;IACzE,MAAM,cAAc,GAAG,SAAS,CAAC,WAAW,EAAE,CAAC;IAC/C,IAAI,cAAc,CAAC,QAAQ,CAAC,MAAM,CAAC,IAAI,cAAc,CAAC,QAAQ,CAAC,WAAW,CAAC,EAAE,CAAC;QAC1E,YAAY,GAAG,wBAAY,CAAC,iBAAiB,CAAC;IAClD,CAAC;SAAM,IAAI,cAAc,CAAC,QAAQ,CAAC,MAAM,CAAC,IAAI,cAAc,CAAC,QAAQ,CAAC,YAAY,CAAC,EAAE,CAAC;QAClF,YAAY,GAAG,wBAAY,CAAC,eAAe,CAAC;IAChD,CAAC;SAAM,IAAI,cAAc,CAAC,QAAQ,CAAC,aAAa,CAAC,IAAI,cAAc,CAAC,QAAQ,CAAC,QAAQ,CAAC,EAAE,CAAC;QACrF,YAAY,GAAG,wBAAY,CAAC,kBAAkB,CAAC;IACnD,CAAC;IAED,aAAa,CAAC,IAAI,CAAC;QACf,WAAW,EAAE,EAAC,KAAK,EAAE,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,EAAE,EAAE,KAAK,EAAC;QACnD,OAAO,EAAE,kBAAkB,SAAS,kCAAkC,YAAY,EAAE;KACvF,CAAC,CAAC;IAEH,OAAO,EAAE,cAAc,EAAE,YAAY,EAAE,CAAA;AAC3C,CAAC;AAOD,KAAK,UAAU,2BAA2B,CAAC,OAA2B,EAAE,aAAqB;IACzF,MAAM,YAAY,GAAG,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC;IAC9C,MAAM,UAAU,GAAG,GAAG,YAAY,wBAAwB,CAAA;IAE1D,MAAM,SAAS,GAAG;QACd,SAAS,EAAE,CAAC,GAAG,OAAO,CAAC;KAC1B,CAAA;IAED,MAAM,aAAa,GAAG,MAAM,IAAA,+BAAoB,EAC9C,MAAM,EACN,UAAU,EACV,SAAS,EACT,aAAa,CACd,CAAC;IAEF,OAAO,aAAa,EAAE,IAAI,EAAE,KAAK,CAAA;AACrC,CAAC;AAgBD,KAAK,UAAU,uBAAuB,CACpC,OAIC,EACD,YAAoB,EACpB,QAAgB,EAChB,aAAqB;IAEnB,MAAM,YAAY,GAAG,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC;IAC9C,MAAM,6BAA6B,GAAG,GAAG,YAAY,+BAA+B,YAAY,EAAE,CAAC;IAEnG,8DAA8D;IAC9D,MAAM,gBAAgB,GAIlB;QACF,MAAM,EAAE,OAAO,CAAC,MAAM;QACtB,GAAG,CAAC,OAAO,CAAC,YAAY,IAAI,EAAE,YAAY,EAAE,OAAO,CAAC,YAAY,EAAE,CAAC;KACpE,CAAC;IAEF,2CAA2C;IAC3C,IAAI,OAAO,CAAC,cAAc,EAAE,CAAC;QAC3B,MAAM,cAAc,GAA+B,EAAE,CAAC;QAEtD,IAAI,OAAO,CAAC,cAAc,CAAC,MAAM,KAAK,SAAS,EAAE,CAAC;YAChD,cAAc,CAAC,MAAM,GAAG,OAAO,CAAC,cAAc,CAAC,MAAM,CAAC;QACxD,CAAC;QACD,IAAI,OAAO,CAAC,cAAc,CAAC,YAAY,KAAK,SAAS,EAAE,CAAC;YACtD,cAAc,CAAC,YAAY,GAAG,OAAO,CAAC,cAAc,CAAC,YAAY,CAAC;QACpE,CAAC;QACD,IAAI,OAAO,CAAC,cAAc,CAAC,+BAA+B,KAAK,SAAS,EAAE,CAAC;YACzE,cAAc,CAAC,+BAA+B,GAAG,OAAO,CAAC,cAAc,CAAC,+BAA+B,CAAC;QAC1G,CAAC;QACD,IAAI,OAAO,CAAC,cAAc,CAAC,gBAAgB,KAAK,SAAS,EAAE,CAAC;YAC1D,cAAc,CAAC,gBAAgB,GAAG,OAAO,CAAC,cAAc,CAAC,gBAAgB,CAAC;QAC5E,CAAC;QACD,IAAI,OAAO,CAAC,cAAc,CAAC,eAAe,KAAK,SAAS,EAAE,CAAC;YACzD,cAAc,CAAC,eAAe,GAAG,OAAO,CAAC,cAAc,CAAC,eAAe,CAAC;QAC1E,CAAC;QAED,yEAAyE;QACzE,IAAI,OAAO,CAAC,cAAc,CAAC,SAAS,KAAK,SAAS,EAAE,CAAC;YACnD,cAAc,CAAC,SAAS,GAAG,OAAO,OAAO,CAAC,cAAc,CAAC,SAAS,KAAK,QAAQ;gBAC7E,CAAC,CAAC,OAAO,CAAC,cAAc,CAAC,SAAS;gBAClC,CAAC,CAAC,OAAO,CAAC,cAAc,CAAC,SAAS,CAAC,WAAW,EAAE,CAAC;QACrD,CAAC;aAAM,IAAI,OAAO,CAAC,cAAc,CAAC,WAAW,KAAK,SAAS,EAAE,CAAC;YAC5D,2DAA2D;YAC3D,cAAc,CAAC,SAAS,GAAG,OAAO,CAAC,cAAc,CAAC,WAAW,CAAC,WAAW,EAAE,CAAC;QAC9E,CAAC;QAED,gBAAgB,CAAC,cAAc,GAAG,cAAc,CAAC;IACnD,CAAC;IAED,MAAM,kBAAkB,GAAG,MAAM,IAAA,+BAAoB,EACnD,MAAM,EACN,6BAA6B,EAC7B,gBAAgB,EAChB,aAAa,CACd,CAAC;IACF,MAAM,CAAC,IAAI,CACT,EAAE,IAAI,EAAE,kBAAkB,EAAE,IAAI,EAAE,EAClC,sBAAsB,OAAO,CAAC,MAAM,kBAAkB,YAAY,eAAe,QAAQ,EAAE,CAC5F,CAAC;IAEF,OAAO,kBAAkB,EAAE,IAAI,CAAC;AACpC,CAAC;AAED,uFAAuF;AACvF,KAAK,UAAU,6BAA6B,CAAC,SAAiB,EAAE,OAAiB,EAAE,aAAqB;IACpG,0CAA0C;IAC1C,MAAM,6BAA6B,GAAG,GAAG,YAAY,6BAA6B,SAAS,uBAAuB,CAAC;IACnH,MAAM,aAAa,GAAG,MAAM,IAAA,+BAAoB,EAAC,KAAK,EAAE,6BAA6B,EAAE,IAAI,EAAE,aAAa,CAAC,CAAC;IAE5G,MAAM,QAAQ,GAAI,CAAC,aAAa,EAAE,IAAI,EAAE,KAAK,IAAI,EAAE,CAA6B;SAC3E,MAAM,CAAC,CAAC,GAAG,EAAE,IAAI,EAAE,EAAE;QAClB,OAAO,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE;YACpB,EAAE,EAAE,IAAI,CAAC,EAAE;YACX,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,WAAW,EAAE,IAAI,CAAC,WAAW;YAC7B,mBAAmB,EAAE,IAAI,CAAC,mBAAmB;YAC7C,eAAe,EAAE,IAAI,CAAC,eAAe;YACrC,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,IAAI,EAAE,EAAE;YACR,SAAS,EAAE,eAAK,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,MAAM,EAAE;YAC7C,SAAS,EAAE,eAAK,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,MAAM,EAAE;SAChD,CAAC,CAAC;IACP,CAAC,EAAE,IAAI,GAAG,EAA8B,CAAC,CAAC;IAE9C,kDAAkD;IAClD,MAAM,mCAAmC,GAAG,GAAG,YAAY,6BAA6B,SAAS,oCAAoC,CAAC;IACtI,MAAM,mBAAmB,GAAG,MAAM,IAAA,+BAAoB,EAAC,MAAM,EAAE,mCAAmC,EAAE;QAChG,OAAO,EAAE;YACL;gBACI,KAAK,EAAE,QAAQ;gBACf,WAAW,EAAE,OAAO;aACvB;SACJ;KACJ,EAAE,aAAa,CAAC,CAAC;IAElB,iDAAiD;IACjD,OAAQ,CAAC,mBAAmB,EAAE,IAAI,EAAE,KAAK,IAAI,EAAE,CAA+B;SACzE,MAAM,CAAC,CAAC,GAAG,EAAE,SAAgD,EAAE,EAAE;QAC9D,OAAO,GAAG,CAAC,GAAG,CAAC,SAAS,CAAC,MAAM,EAAE,SAAS,CAAC,OAAO;aAC7C,GAAG,CAAC,CAAC,MAAM,EAAE,EAAE;YACZ,MAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;YAClC,IAAI,CAAC,IAAI,EAAE,CAAC;gBACR,MAAM,IAAI,KAAK,CAAC,+BAA+B,MAAM,eAAe,SAAS,CAAC,MAAM,0BAA0B,SAAS,GAAG,CAAC,CAAC;YAChI,CAAC;YAED,OAAO,IAAI,CAAC;QAChB,CAAC,CAAC;aACD,MAAM,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,KAAK,SAAS,CAAC,CACxC,CAAC;IACN,CAAC,EAAE,IAAI,GAAG,EAAgC,CAAC,CAAC;AACpD,CAAC"}
|
|
@@ -89,7 +89,7 @@ export type DataImportFileUpload = {
|
|
|
89
89
|
isArchived: boolean;
|
|
90
90
|
isDeleted: boolean;
|
|
91
91
|
lastProcessedByUserId?: string;
|
|
92
|
-
rejectReason?:
|
|
92
|
+
rejectReason?: RejectReason;
|
|
93
93
|
patientInfo: PatientInfo;
|
|
94
94
|
documentDate?: Date;
|
|
95
95
|
labProfileId?: string;
|
|
@@ -261,6 +261,18 @@ export declare enum PipelineStep {
|
|
|
261
261
|
MATCHING_BIOMARKERS = "MATCHING_BIOMARKERS",
|
|
262
262
|
SENDING_RESULTS = "SENDING_RESULTS"
|
|
263
263
|
}
|
|
264
|
+
export declare enum RejectReason {
|
|
265
|
+
INVALID_DATA_NO_BIOMARKER_DATA = "Invalid Data = No Biomarker Data",
|
|
266
|
+
LOW_IMAGE_QUALITY = "Low Image Quality",
|
|
267
|
+
NO_IN_PANEL_BIOMARKER = "No In-Panel Biomarker",
|
|
268
|
+
UNDERAGE_PERSON = "Underage Person",
|
|
269
|
+
LANGUAGE_NOT_SUPPORTED = "Language Not Supported",
|
|
270
|
+
IMPLAUSIBLE_DATA = "(Implausible Data)",
|
|
271
|
+
MISSING_EXAM_DATE = "Missing Exam Date",
|
|
272
|
+
UNSUPPORTED_UPLOAD = "Unsupported Upload",
|
|
273
|
+
INCOMPLETE_DATA = "Incomplete Data (ie. missing units)",
|
|
274
|
+
NOT_AN_OFFICIAL_REPORT = "Not An Official Report"
|
|
275
|
+
}
|
|
264
276
|
export type Biomarker = {
|
|
265
277
|
id: number;
|
|
266
278
|
title: string;
|
package/dist/types/oht.types.js
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
"use strict";
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
exports.AcfBiomarkerRangeAnnotationCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.ManualCheck = exports.BiomarkerCompatibility = exports.ReferenceRangeType = exports.GoLiveStatus = exports.PipelineStep = exports.DigitizationStatus = exports.MeasurementValueComparator = exports.BiomarkerValueType = exports.DataImportFileUploadStatus = exports.UploadType = exports.Sex = void 0;
|
|
3
|
+
exports.AcfBiomarkerRangeAnnotationCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.ManualCheck = exports.BiomarkerCompatibility = exports.ReferenceRangeType = exports.GoLiveStatus = exports.RejectReason = exports.PipelineStep = exports.DigitizationStatus = exports.MeasurementValueComparator = exports.BiomarkerValueType = exports.DataImportFileUploadStatus = exports.UploadType = exports.Sex = void 0;
|
|
4
4
|
var Sex;
|
|
5
5
|
(function (Sex) {
|
|
6
6
|
Sex["MALE"] = "MALE";
|
|
@@ -57,6 +57,19 @@ var PipelineStep;
|
|
|
57
57
|
PipelineStep["MATCHING_BIOMARKERS"] = "MATCHING_BIOMARKERS";
|
|
58
58
|
PipelineStep["SENDING_RESULTS"] = "SENDING_RESULTS";
|
|
59
59
|
})(PipelineStep || (exports.PipelineStep = PipelineStep = {}));
|
|
60
|
+
var RejectReason;
|
|
61
|
+
(function (RejectReason) {
|
|
62
|
+
RejectReason["INVALID_DATA_NO_BIOMARKER_DATA"] = "Invalid Data = No Biomarker Data";
|
|
63
|
+
RejectReason["LOW_IMAGE_QUALITY"] = "Low Image Quality";
|
|
64
|
+
RejectReason["NO_IN_PANEL_BIOMARKER"] = "No In-Panel Biomarker";
|
|
65
|
+
RejectReason["UNDERAGE_PERSON"] = "Underage Person";
|
|
66
|
+
RejectReason["LANGUAGE_NOT_SUPPORTED"] = "Language Not Supported";
|
|
67
|
+
RejectReason["IMPLAUSIBLE_DATA"] = "(Implausible Data)";
|
|
68
|
+
RejectReason["MISSING_EXAM_DATE"] = "Missing Exam Date";
|
|
69
|
+
RejectReason["UNSUPPORTED_UPLOAD"] = "Unsupported Upload";
|
|
70
|
+
RejectReason["INCOMPLETE_DATA"] = "Incomplete Data (ie. missing units)";
|
|
71
|
+
RejectReason["NOT_AN_OFFICIAL_REPORT"] = "Not An Official Report";
|
|
72
|
+
})(RejectReason || (exports.RejectReason = RejectReason = {}));
|
|
60
73
|
var GoLiveStatus;
|
|
61
74
|
(function (GoLiveStatus) {
|
|
62
75
|
GoLiveStatus["Green"] = "green";
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;AA8OA,IAAY,GAIX;AAJD,WAAY,GAAG;IACb,oBAAa,CAAA;IACb,wBAAiB,CAAA;IACjB,sBAAe,CAAA;AACjB,CAAC,EAJW,GAAG,mBAAH,GAAG,QAId;AAED,IAAY,UAGX;AAHD,WAAY,UAAU;IACpB,qDAAuC,CAAA;IACvC,6BAAe,CAAA;AACjB,CAAC,EAHW,UAAU,0BAAV,UAAU,QAGrB;AAED,IAAY,0BAYX;AAZD,WAAY,0BAA0B;IACpC,mDAAqB,CAAA;IACrB,iDAAmB,CAAA;IACnB,uDAAyB,CAAA;IACzB,uDAAyB,CAAA;IACzB,qDAAuB,CAAA;IACvB,qDAAuB,CAAA;IACvB,6CAAe,CAAA;IACf,iDAAmB,CAAA;IACnB,mDAAqB,CAAA;IACrB,mDAAqB,CAAA;IACrB,2DAA6B,CAAA;AAC/B,CAAC,EAZW,0BAA0B,0CAA1B,0BAA0B,QAYrC;AAED,IAAY,kBAGX;AAHD,WAAY,kBAAkB;IAC5B,uDAAiC,CAAA;IACjC,6CAAuB,CAAA;AACzB,CAAC,EAHW,kBAAkB,kCAAlB,kBAAkB,QAG7B;AAED,IAAY,0BAIX;AAJD,WAAY,0BAA0B;IACpC,6CAAe,CAAA;IACf,2DAA6B,CAAA;IAC7B,qDAAuB,CAAA;AACzB,CAAC,EAJW,0BAA0B,0CAA1B,0BAA0B,QAIrC;AAED,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,yCAAmB,CAAA;IACnB,+CAAyB,CAAA;IACzB,mCAAa,CAAA;IACb,qCAAe,CAAA;IACf,2CAAqB,CAAA;AACvB,CAAC,EAPW,kBAAkB,kCAAlB,kBAAkB,QAO7B;AAED,IAAY,YASX;AATD,WAAY,YAAY;IACtB,6CAA6B,CAAA;IAC7B,mDAAmC,CAAA;IACnC,yDAAyC,CAAA;IACzC,2DAA2C,CAAA;IAC3C,2DAA2C,CAAA;IAC3C,+DAA+C,CAAA;IAC/C,2DAA2C,CAAA;IAC3C,mDAAmC,CAAA;AACrC,CAAC,EATW,YAAY,4BAAZ,YAAY,QASvB;AA6CD,IAAY,YAIX;AAJD,WAAY,YAAY;IACtB,+BAAe,CAAA;IACf,iCAAiB,CAAA;IACjB,2BAAW,CAAA;AACb,CAAC,EAJW,YAAY,4BAAZ,YAAY,QAIvB;AAsCD,IAAY,kBAIX;AAJD,WAAY,kBAAkB;IAC5B,6CAAuB,CAAA;IACvB,2CAAqB,CAAA;IACrB,uDAAiC,CAAA;AACnC,CAAC,EAJW,kBAAkB,kCAAlB,kBAAkB,QAI7B;AAED,IAAY,sBAOX;AAPD,WAAY,sBAAsB;IAChC,+CAAqB,CAAA;IACrB,+CAAqB,CAAA;IACrB,4EAAkD,CAAA;IAClD,4EAAkD,CAAA;IAClD,4DAAkC,CAAA;IAClC,2CAAiB,CAAA;AACnB,CAAC,EAPW,sBAAsB,sCAAtB,sBAAsB,QAOjC;AAED,IAAY,WAGX;AAHD,WAAY,WAAW;IACrB,wBAAS,CAAA;IACT,sCAAuB,CAAA;AACzB,CAAC,EAHW,WAAW,2BAAX,WAAW,QAGtB;AAED,IAAY,kCAGX;AAHD,WAAY,kCAAkC;IAC5C,6DAAuB,CAAA;IACvB,iEAA2B,CAAA;AAC7B,CAAC,EAHW,kCAAkC,kDAAlC,kCAAkC,QAG7C;AAED,IAAY,gCAMX;AAND,WAAY,gCAAgC;IAC1C,2DAAuB,CAAA;IACvB,6EAAyC,CAAA;IACzC,+EAA2C,CAAA;IAC3C,2FAAuD,CAAA;IACvD,uFAAmD,CAAA;AACrD,CAAC,EANW,gCAAgC,gDAAhC,gCAAgC,QAM3C"}
|
|
1
|
+
{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;AA8OA,IAAY,GAIX;AAJD,WAAY,GAAG;IACb,oBAAa,CAAA;IACb,wBAAiB,CAAA;IACjB,sBAAe,CAAA;AACjB,CAAC,EAJW,GAAG,mBAAH,GAAG,QAId;AAED,IAAY,UAGX;AAHD,WAAY,UAAU;IACpB,qDAAuC,CAAA;IACvC,6BAAe,CAAA;AACjB,CAAC,EAHW,UAAU,0BAAV,UAAU,QAGrB;AAED,IAAY,0BAYX;AAZD,WAAY,0BAA0B;IACpC,mDAAqB,CAAA;IACrB,iDAAmB,CAAA;IACnB,uDAAyB,CAAA;IACzB,uDAAyB,CAAA;IACzB,qDAAuB,CAAA;IACvB,qDAAuB,CAAA;IACvB,6CAAe,CAAA;IACf,iDAAmB,CAAA;IACnB,mDAAqB,CAAA;IACrB,mDAAqB,CAAA;IACrB,2DAA6B,CAAA;AAC/B,CAAC,EAZW,0BAA0B,0CAA1B,0BAA0B,QAYrC;AAED,IAAY,kBAGX;AAHD,WAAY,kBAAkB;IAC5B,uDAAiC,CAAA;IACjC,6CAAuB,CAAA;AACzB,CAAC,EAHW,kBAAkB,kCAAlB,kBAAkB,QAG7B;AAED,IAAY,0BAIX;AAJD,WAAY,0BAA0B;IACpC,6CAAe,CAAA;IACf,2DAA6B,CAAA;IAC7B,qDAAuB,CAAA;AACzB,CAAC,EAJW,0BAA0B,0CAA1B,0BAA0B,QAIrC;AAED,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,yCAAmB,CAAA;IACnB,+CAAyB,CAAA;IACzB,mCAAa,CAAA;IACb,qCAAe,CAAA;IACf,2CAAqB,CAAA;AACvB,CAAC,EAPW,kBAAkB,kCAAlB,kBAAkB,QAO7B;AAED,IAAY,YASX;AATD,WAAY,YAAY;IACtB,6CAA6B,CAAA;IAC7B,mDAAmC,CAAA;IACnC,yDAAyC,CAAA;IACzC,2DAA2C,CAAA;IAC3C,2DAA2C,CAAA;IAC3C,+DAA+C,CAAA;IAC/C,2DAA2C,CAAA;IAC3C,mDAAmC,CAAA;AACrC,CAAC,EATW,YAAY,4BAAZ,YAAY,QASvB;AAED,IAAY,YAWX;AAXD,WAAY,YAAY;IACtB,mFAAmE,CAAA;IACnE,uDAAuC,CAAA;IACvC,+DAA+C,CAAA;IAC/C,mDAAmC,CAAA;IACnC,iEAAiD,CAAA;IACjD,uDAAuC,CAAA;IACvC,uDAAuC,CAAA;IACvC,yDAAyC,CAAA;IACzC,uEAAuD,CAAA;IACvD,iEAAiD,CAAA;AACnD,CAAC,EAXW,YAAY,4BAAZ,YAAY,QAWvB;AA6CD,IAAY,YAIX;AAJD,WAAY,YAAY;IACtB,+BAAe,CAAA;IACf,iCAAiB,CAAA;IACjB,2BAAW,CAAA;AACb,CAAC,EAJW,YAAY,4BAAZ,YAAY,QAIvB;AAsCD,IAAY,kBAIX;AAJD,WAAY,kBAAkB;IAC5B,6CAAuB,CAAA;IACvB,2CAAqB,CAAA;IACrB,uDAAiC,CAAA;AACnC,CAAC,EAJW,kBAAkB,kCAAlB,kBAAkB,QAI7B;AAED,IAAY,sBAOX;AAPD,WAAY,sBAAsB;IAChC,+CAAqB,CAAA;IACrB,+CAAqB,CAAA;IACrB,4EAAkD,CAAA;IAClD,4EAAkD,CAAA;IAClD,4DAAkC,CAAA;IAClC,2CAAiB,CAAA;AACnB,CAAC,EAPW,sBAAsB,sCAAtB,sBAAsB,QAOjC;AAED,IAAY,WAGX;AAHD,WAAY,WAAW;IACrB,wBAAS,CAAA;IACT,sCAAuB,CAAA;AACzB,CAAC,EAHW,WAAW,2BAAX,WAAW,QAGtB;AAED,IAAY,kCAGX;AAHD,WAAY,kCAAkC;IAC5C,6DAAuB,CAAA;IACvB,iEAA2B,CAAA;AAC7B,CAAC,EAHW,kCAAkC,kDAAlC,kCAAkC,QAG7C;AAED,IAAY,gCAMX;AAND,WAAY,gCAAgC;IAC1C,2DAAuB,CAAA;IACvB,6EAAyC,CAAA;IACzC,+EAA2C,CAAA;IAC3C,2FAAuD,CAAA;IACvD,uFAAmD,CAAA;AACrD,CAAC,EANW,gCAAgC,gDAAhC,gCAAgC,QAM3C"}
|