@openhealth/oht-custom-parser-lib 0.2.45 → 0.2.47
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/service/ohtMeasurementsExtractor.service.js +3 -0
- package/dist/service/ohtMeasurementsExtractor.service.js.map +1 -1
- package/dist/types/custom-parser.types.d.ts +3 -2
- package/dist/types/oht.types.d.ts +1 -0
- package/dist/types/oht.types.js.map +1 -1
- package/dist/util-ts/dataUtils.js +4 -6
- package/dist/util-ts/dataUtils.js.map +1 -1
- package/package.json +1 -1
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@@ -388,6 +388,8 @@ async function ohtMeasurementsExtractor(labToOhtContract, exams, ohtCoreApiKey)
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const effectiveDate = labToOhtMapper?.effectiveDate ? new Date(labToOhtMapper.effectiveDate).toISOString() : null;
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const examCollectionDate = labToOhtMapper?.examCollectionDate ? new Date(labToOhtMapper.examCollectionDate).toISOString() : null;
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const examEffectiveDate = labToOhtMapper?.examEffectiveDate ? new Date(labToOhtMapper.examEffectiveDate).toISOString() : null;
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+
// add original name for document search
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+
const originalName = labToOhtMapper?.originalName ?? '';
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let measurement = {
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biomarkerId: ohtBiomarker.id,
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valueType,
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@@ -407,6 +409,7 @@ async function ohtMeasurementsExtractor(labToOhtContract, exams, ohtCoreApiKey)
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effectiveDate: effectiveDate,
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examCollectionDate: examCollectionDate,
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examEffectiveDate: examEffectiveDate,
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+
originalName: originalName,
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};
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measurements.push(measurement);
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}
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@@ -1 +1 @@
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1
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-
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1
|
+
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|
@@ -1,5 +1,5 @@
|
|
|
1
1
|
import { ErrorMessage } from "./error.types";
|
|
2
|
-
import {
|
|
2
|
+
import { AnnotationConfig, DataOrigin, MeasurementValueComparator, OhtExam, PatientInfo } from "./oht.types";
|
|
3
3
|
export declare const unitSynonyms: Record<string, string>;
|
|
4
4
|
export interface ValueExtraction {
|
|
5
5
|
valuePosition?: string;
|
|
@@ -65,7 +65,8 @@ export interface LabToOhtMapper {
|
|
|
65
65
|
rangeExtraction?: RangeExtraction;
|
|
66
66
|
referenceAsAnnotation?: ReferenceAsAnnotation;
|
|
67
67
|
unknownMeasurement?: UnknownMeasurementExtraction;
|
|
68
|
-
annotationConfig?:
|
|
68
|
+
annotationConfig?: AnnotationConfig;
|
|
69
|
+
originalName?: string;
|
|
69
70
|
}
|
|
70
71
|
export interface LabToOhtContract {
|
|
71
72
|
labToOhtList: LabToOhtMapper[];
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;
|
|
1
|
+
{"version":3,"file":"oht.types.js","sourceRoot":"","sources":["../../types/oht.types.ts"],"names":[],"mappings":";;;AA4OA,IAAY,GAIX;AAJD,WAAY,GAAG;IACb,oBAAa,CAAA;IACb,wBAAiB,CAAA;IACjB,sBAAe,CAAA;AACjB,CAAC,EAJW,GAAG,mBAAH,GAAG,QAId;AAED,IAAY,UAGX;AAHD,WAAY,UAAU;IACpB,qDAAuC,CAAA;IACvC,6BAAe,CAAA;AACjB,CAAC,EAHW,UAAU,0BAAV,UAAU,QAGrB;AAED,IAAY,0BAYX;AAZD,WAAY,0BAA0B;IACpC,mDAAqB,CAAA;IACrB,iDAAmB,CAAA;IACnB,uDAAyB,CAAA;IACzB,uDAAyB,CAAA;IACzB,qDAAuB,CAAA;IACvB,qDAAuB,CAAA;IACvB,6CAAe,CAAA;IACf,iDAAmB,CAAA;IACnB,mDAAqB,CAAA;IACrB,mDAAqB,CAAA;IACrB,2DAA6B,CAAA;AAC/B,CAAC,EAZW,0BAA0B,0CAA1B,0BAA0B,QAYrC;AAED,IAAY,kBAGX;AAHD,WAAY,kBAAkB;IAC5B,uDAAiC,CAAA;IACjC,6CAAuB,CAAA;AACzB,CAAC,EAHW,kBAAkB,kCAAlB,kBAAkB,QAG7B;AAED,IAAY,0BAIX;AAJD,WAAY,0BAA0B;IACpC,6CAAe,CAAA;IACf,2DAA6B,CAAA;IAC7B,qDAAuB,CAAA;AACzB,CAAC,EAJW,0BAA0B,0CAA1B,0BAA0B,QAIrC;AAED,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,yCAAmB,CAAA;IACnB,+CAAyB,CAAA;IACzB,mCAAa,CAAA;IACb,qCAAe,CAAA;IACf,2CAAqB,CAAA;AACvB,CAAC,EAPW,kBAAkB,kCAAlB,kBAAkB,QAO7B;AAED,IAAY,YASX;AATD,WAAY,YAAY;IACtB,6CAA6B,CAAA;IAC7B,mDAAmC,CAAA;IACnC,yDAAyC,CAAA;IACzC,2DAA2C,CAAA;IAC3C,2DAA2C,CAAA;IAC3C,+DAA+C,CAAA;IAC/C,2DAA2C,CAAA;IAC3C,mDAAmC,CAAA;AACrC,CAAC,EATW,YAAY,4BAAZ,YAAY,QASvB;AA4CD,IAAY,YAIX;AAJD,WAAY,YAAY;IACtB,+BAAe,CAAA;IACf,iCAAiB,CAAA;IACjB,2BAAW,CAAA;AACb,CAAC,EAJW,YAAY,4BAAZ,YAAY,QAIvB;AAsCD,IAAY,kBAIX;AAJD,WAAY,kBAAkB;IAC5B,6CAAuB,CAAA;IACvB,2CAAqB,CAAA;IACrB,uDAAiC,CAAA;AACnC,CAAC,EAJW,kBAAkB,kCAAlB,kBAAkB,QAI7B;AAED,IAAY,sBAOX;AAPD,WAAY,sBAAsB;IAChC,+CAAqB,CAAA;IACrB,+CAAqB,CAAA;IACrB,4EAAkD,CAAA;IAClD,4EAAkD,CAAA;IAClD,4DAAkC,CAAA;IAClC,2CAAiB,CAAA;AACnB,CAAC,EAPW,sBAAsB,sCAAtB,sBAAsB,QAOjC;AAED,IAAY,WAGX;AAHD,WAAY,WAAW;IACrB,wBAAS,CAAA;IACT,sCAAuB,CAAA;AACzB,CAAC,EAHW,WAAW,2BAAX,WAAW,QAGtB;AAED,IAAY,kCAGX;AAHD,WAAY,kCAAkC;IAC5C,6DAAuB,CAAA;IACvB,iEAA2B,CAAA;AAC7B,CAAC,EAHW,kCAAkC,kDAAlC,kCAAkC,QAG7C;AAED,IAAY,gCAMX;AAND,WAAY,gCAAgC;IAC1C,2DAAuB,CAAA;IACvB,6EAAyC,CAAA;IACzC,+EAA2C,CAAA;IAC3C,2FAAuD,CAAA;IACvD,uFAAmD,CAAA;AACrD,CAAC,EANW,gCAAgC,gDAAhC,gCAAgC,QAM3C"}
|
|
@@ -158,7 +158,7 @@ function extractFromPath(obj, path) {
|
|
|
158
158
|
const [arrKey, rest] = path.split('[*].');
|
|
159
159
|
const arr = obj?.[arrKey];
|
|
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|
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|
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return
|
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+
return obj?.[rest];
|
|
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|
const values = arr.map((item) => extractFromPath(item, rest)).filter((v) => v);
|
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|
const str = values.join(' ');
|
|
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|
return str || null;
|
|
@@ -218,14 +218,12 @@ function findExamByLabKey(exams, labKey) {
|
|
|
218
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|
return null;
|
|
219
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|
// First, find exam with any key having value matching labKeyFirstHalf
|
|
220
220
|
const examWithlabKeyFirstHalf = exams.find(exam => {
|
|
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|
-
|
|
222
|
-
return findObjectWithValue(examData, labKeyFirstHalf);
|
|
221
|
+
return findObjectWithValue(exam, labKeyFirstHalf);
|
|
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222
|
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|
|
224
223
|
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|
|
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|
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|
|
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|
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const examData = examWithlabKeyFirstHalf.ohtExam || examWithlabKeyFirstHalf;
|
|
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225
|
// Then, find child object within that exam with any key having value matching labKeySecondHalf
|
|
228
|
-
return findChildObjectWithValue(
|
|
226
|
+
return findChildObjectWithValue(examWithlabKeyFirstHalf, labKeySecondHalf);
|
|
229
227
|
}
|
|
230
228
|
/**
|
|
231
229
|
* Helper function to find if an object has any key with the specified value
|
|
@@ -238,7 +236,7 @@ function findObjectWithValue(obj, targetValue) {
|
|
|
238
236
|
return false;
|
|
239
237
|
// Check if any direct property has the target value
|
|
240
238
|
for (const key in obj) {
|
|
241
|
-
if (obj[key] === targetValue)
|
|
239
|
+
if (obj[key].trim() === targetValue.trim())
|
|
242
240
|
return true;
|
|
243
241
|
}
|
|
244
242
|
return false;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
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1
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