npm - @openhealth/oht-custom-parser-lib - Versions diffs - 0.2.41 → 0.2.43 - Mend

@openhealth/oht-custom-parser-lib 0.2.41 → 0.2.43

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (10) hide show

package/dist/index.d.ts +3 -2
package/dist/index.js +3 -1
package/dist/index.js.map +1 -1
package/dist/service/ohtMeasurementsExtractor.service.js +9 -5
package/dist/service/ohtMeasurementsExtractor.service.js.map +1 -1
package/dist/types/oht.types.d.ts +52 -35
package/dist/util-ts/dataUtils.d.ts +62 -3
package/dist/util-ts/dataUtils.js +279 -54
package/dist/util-ts/dataUtils.js.map +1 -1
package/package.json +1 -1

package/dist/index.d.ts CHANGED Viewed

@@ -7,8 +7,9 @@ export { LabToOhtContract, LabToOhtMapper, UnknownMeasurementExtraction, Referen
 export { AcfBiomarkerRangeAnnotationCheck, AcfBiomarkerGenericDisclaimerLogic, ManualCheck, BiomarkerCompatibility, ReferenceRangeType, AcfReferenceRange, VisualRange, NameAlias, AlternativeUnit, BiomarkerAcf, Biomarker, PipelineStep, DigitizationStatus, MeasurementValueComparator, BiomarkerValueType, DataImportFileUploadStatus, Sex, Digitization, PatientInfo, UnknownMeasurement, Measurement, DataImportFileUpload, MessagePayload, SignedUpload, ReportStyleConfig, LanguageCode, BiomarkerCustomisation, PartnerCustomPanel, ReportDisplaySettings, ReportCustomisation, OHTPartner, UploadType, } from './types/oht.types';
 export { ErrorMessage } from './types/error.types';
 export { makeApiCallWithRetry, parseErrorObj } from './util-ts/apiUtils';
-export { extractValue, isBiomarkerValueNumerical, isBiomarkerExternalNoVisualRange } from './util-ts/dataUtils';
+export { extractValue, isBiomarkerValueNumerical, isBiomarkerExternalNoVisualRange, processAppendedMappings, generateAnnotationPreview } from './util-ts/dataUtils';
 export { readFileFromBucket, uploadFileBufferToGCS } from './util-ts/googleStorageUtils';
 export { default as pinoLogger } from './util-ts/pinoLogger';
 export { getGreaterThanPatterns, getLowerThanPatterns } from './util-ts/regexUtils';
-export { getMappedBiomarkers, } from './util-ts/dataUtils';
+export { getMappedBiomarkers } from './util-ts/dataUtils';
+export { AnnotationPreviewResult, AnnotationConfig, ExtractionPath } from './util-ts/dataUtils';

package/dist/index.js CHANGED Viewed

@@ -3,7 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getMappedBiomarkers = exports.getLowerThanPatterns = exports.getGreaterThanPatterns = exports.pinoLogger = exports.uploadFileBufferToGCS = exports.readFileFromBucket = exports.isBiomarkerExternalNoVisualRange = exports.isBiomarkerValueNumerical = exports.extractValue = exports.parseErrorObj = exports.makeApiCallWithRetry = exports.UploadType = exports.Sex = exports.DataImportFileUploadStatus = exports.BiomarkerValueType = exports.MeasurementValueComparator = exports.DigitizationStatus = exports.PipelineStep = exports.ReferenceRangeType = exports.BiomarkerCompatibility = exports.ManualCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.AcfBiomarkerRangeAnnotationCheck = exports.unitSynonyms = exports.generateBIMessages = exports.publishToTopic = exports.aggregateBiMessages = exports.aggregateMessages = exports.sendMessageToSlack = exports.getSlackFileIssueNotificationMessage = exports.extractValueFromGreaterLowerThan = exports.extractUnit = exports.getRangeFromPositionAndRegex = exports.parseExamValue = exports.extractReferenceAnnotation = exports.extractReferenceRanges = exports.checkValueForPlausibleValues = exports.ohtMeasurementsExtractor = exports.postFileUploadSetStatus = exports.queryFileUploadsWithFilters = exports.handleRejection = exports.isPatientAgeValid = exports.parseGender = exports.parseExternalPatientId = exports.postDataImportFileUploadToCore = void 0;
+exports.getMappedBiomarkers = exports.getLowerThanPatterns = exports.getGreaterThanPatterns = exports.pinoLogger = exports.uploadFileBufferToGCS = exports.readFileFromBucket = exports.generateAnnotationPreview = exports.processAppendedMappings = exports.isBiomarkerExternalNoVisualRange = exports.isBiomarkerValueNumerical = exports.extractValue = exports.parseErrorObj = exports.makeApiCallWithRetry = exports.UploadType = exports.Sex = exports.DataImportFileUploadStatus = exports.BiomarkerValueType = exports.MeasurementValueComparator = exports.DigitizationStatus = exports.PipelineStep = exports.ReferenceRangeType = exports.BiomarkerCompatibility = exports.ManualCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.AcfBiomarkerRangeAnnotationCheck = exports.unitSynonyms = exports.generateBIMessages = exports.publishToTopic = exports.aggregateBiMessages = exports.aggregateMessages = exports.sendMessageToSlack = exports.getSlackFileIssueNotificationMessage = exports.extractValueFromGreaterLowerThan = exports.extractUnit = exports.getRangeFromPositionAndRegex = exports.parseExamValue = exports.extractReferenceAnnotation = exports.extractReferenceRanges = exports.checkValueForPlausibleValues = exports.ohtMeasurementsExtractor = exports.postFileUploadSetStatus = exports.queryFileUploadsWithFilters = exports.handleRejection = exports.isPatientAgeValid = exports.parseGender = exports.parseExternalPatientId = exports.postDataImportFileUploadToCore = void 0;
 // ### SERVICES ###
 var reportCreator_service_1 = require("./service/reportCreator.service");
 Object.defineProperty(exports, "postDataImportFileUploadToCore", { enumerable: true, get: function () { return reportCreator_service_1.postDataImportFileUploadToCore; } });
@@ -55,6 +55,8 @@ var dataUtils_1 = require("./util-ts/dataUtils");
 Object.defineProperty(exports, "extractValue", { enumerable: true, get: function () { return dataUtils_1.extractValue; } });
 Object.defineProperty(exports, "isBiomarkerValueNumerical", { enumerable: true, get: function () { return dataUtils_1.isBiomarkerValueNumerical; } });
 Object.defineProperty(exports, "isBiomarkerExternalNoVisualRange", { enumerable: true, get: function () { return dataUtils_1.isBiomarkerExternalNoVisualRange; } });
+Object.defineProperty(exports, "processAppendedMappings", { enumerable: true, get: function () { return dataUtils_1.processAppendedMappings; } });
+Object.defineProperty(exports, "generateAnnotationPreview", { enumerable: true, get: function () { return dataUtils_1.generateAnnotationPreview; } });
 var googleStorageUtils_1 = require("./util-ts/googleStorageUtils");
 Object.defineProperty(exports, "readFileFromBucket", { enumerable: true, get: function () { return googleStorageUtils_1.readFileFromBucket; } });
 Object.defineProperty(exports, "uploadFileBufferToGCS", { enumerable: true, get: function () { return googleStorageUtils_1.uploadFileBufferToGCS; } });

package/dist/index.js.map CHANGED Viewed

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package/dist/service/ohtMeasurementsExtractor.service.js CHANGED Viewed

@@ -71,22 +71,26 @@ function extractReferenceAnnotation(labToOhtMapper, rawExam, patientInfo, docume
     let annotation = '';
     // if it is an appended mapping, add the extracted values to annotation
     if (labToOhtMapper?.annotationConfig?.enabled) {
-        const appendedValues = (0, dataUtils_1.processAppendedMappings)(exams, labToOhtMapper.annotationConfig.labKeys);
-        if (appendedValues) {
-            annotation += appendedValues;
+        const appendedResult = (0, dataUtils_1.processAppendedMappings)(exams, labToOhtMapper.annotationConfig.labKeys, filename, {
+            maxLength: labToOhtMapper.annotationConfig.maxLength,
+            fallbackValue: labToOhtMapper.annotationConfig.fallbackValue,
+            separator: labToOhtMapper.annotationConfig.separator
+        });
+        if (appendedResult.text?.length) {
+            annotation += appendedResult.text;
         }
     }
     // if annotationExtractionFunc exists, add its result to annotation with line break
     if (annotationExtractionFunc) {
         const extractedAnnotation = annotationExtractionFunc(rawExam, labToOhtMapper, patientInfo, documentDate);
-        if (extractedAnnotation) {
+        if (extractedAnnotation?.length) {
             annotation += annotation ? `\n${extractedAnnotation}` : extractedAnnotation;
         }
     }
     else {
         const extractedReference = (0, dataUtils_1.extractValue)(rawExam, labToOhtMapper?.referenceAsAnnotation?.position);
         const reference = extractedReference?.valor?.trim() || extractedReference?.val?.trim() || extractedReference;
-        if (reference?.length > 0) {
+        if (reference?.length) {
             annotation += annotation ? `\n${reference}` : reference;
         }
     }

package/dist/service/ohtMeasurementsExtractor.service.js.map CHANGED Viewed

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package/dist/types/oht.types.d.ts CHANGED Viewed

@@ -363,6 +363,54 @@ export declare enum AcfBiomarkerRangeAnnotationCheck {
     SHOW_WOMEN_IF_NO_EXTERNAL = "SHOW_WOMEN_IF_NO_EXTERNAL",
     SHOW_MEN_IF_NO_EXTERNAL = "SHOW_MEN_IF_NO_EXTERNAL"
 }
+/** Range extraction configuration */
+export interface RangeExtractionConfig {
+    enabled: boolean;
+    useInternalRange: boolean;
+    rangePosition?: string;
+    extractionRegex?: string;
+    extractionFunc?: string;
+}
+/** Unit extraction configuration */
+export interface UnitExtractionConfig {
+    enabled: boolean;
+    predefinedUnit?: string;
+    unitPosition?: string;
+    extractionRegex?: string;
+    extractionFunc?: string;
+}
+/** Reference as annotation configuration */
+export interface ReferenceAsAnnotationConfig {
+    enabled: boolean;
+    position?: string;
+    annotationType?: string;
+    extractionFunc?: string;
+}
+/** Extraction path configuration */
+export interface ExtractionPath {
+    path: string;
+    required: boolean;
+    format?: string;
+    defaultValue?: string;
+}
+/** Lab key configuration for annotation */
+export interface AnnotationLabKey {
+    labKey: string;
+    extractionPaths: ExtractionPath[];
+    required: boolean;
+    prefix?: string;
+    suffix?: string;
+}
+/** Annotation configuration for appended biomarkers */
+export interface AnnotationConfig {
+    enabled: boolean;
+    labKeys?: AnnotationLabKey[];
+    maxLength?: number;
+    fallbackValue?: string;
+    separator?: string;
+    concatenationMode?: 'space' | 'newline' | 'comma';
+}
+/** Main backend biomarker mapping interface */
 export interface BackendBiomarkerMapping {
     ohtBmId: number;
     labKey: string;
@@ -371,44 +419,13 @@ export interface BackendBiomarkerMapping {
     isIgnored?: boolean;
     keepAsUnmapped?: boolean;
     /** Range extraction configuration */
-    rangeExtraction: {
-        enabled: boolean;
-        useInternalRange: boolean;
-        rangePosition?: string;
-        extractionRegex?: string;
-        extractionFunc?: string;
-    };
+    rangeExtraction: RangeExtractionConfig;
     /** Unit extraction configuration */
-    unitExtraction: {
-        enabled: boolean;
-        predefinedUnit?: string;
-        unitPosition?: string;
-        extractionRegex?: string;
-        extractionFunc?: string;
-    };
+    unitExtraction: UnitExtractionConfig;
     /** Reference as annotation configuration */
-    referenceAsAnnotation: {
-        enabled: boolean;
-        position?: string;
-        annotationType?: string;
-        extractionFunc?: string;
-    };
+    referenceAsAnnotation: ReferenceAsAnnotationConfig;
     /** Annotation configuration for appended biomarkers */
-    annotationConfig?: {
-        enabled: boolean;
-        labKeys?: Array<{
-            labKey: string;
-            extractionPaths: Array<{
-                path: string;
-                required: boolean;
-                format?: string;
-                defaultValue?: string;
-            }>;
-            required: boolean;
-            prefix?: string;
-            suffix?: string;
-        }>;
-    };
+    annotationConfig?: AnnotationConfig;
     /** Optional tagged LOINC code */
     taggedLoincCode?: string;
 }

package/dist/util-ts/dataUtils.d.ts CHANGED Viewed

@@ -1,4 +1,31 @@
-import { UnknownMeasurementsBulk, Exam, BackendBiomarkerMapping } from '../types/oht.types';
+import { UnknownMeasurementsBulk, AnnotationLabKey } from '../types/oht.types';
+export interface AnnotationPreviewResult {
+    success: boolean;
+    text: string;
+    error?: string;
+    extractedValues: Array<{
+        labKey: string;
+        path: string;
+        value: string;
+        formatted: string;
+        required: boolean;
+        used: boolean;
+    }>;
+}
+export interface AnnotationConfig {
+    enabled: boolean;
+    labKeys?: AnnotationLabKey[];
+    concatenationMode?: 'space' | 'newline' | 'comma';
+    separator?: string;
+    maxLength?: number;
+    fallbackValue?: string;
+}
+export interface ExtractionPath {
+    path: string;
+    required: boolean;
+    format?: string;
+    defaultValue?: string;
+}
 export declare function isBiomarkerValueNumerical(biomarker: any): boolean;
 export declare function isBiomarkerExternalNoVisualRange(biomarker: any): boolean;
 export declare const extractValue: (obj: any, position?: string) => any;
@@ -6,8 +33,40 @@ export declare const getMappedBiomarkers: (partnerId: string, ohtCoreApiKey: str
 export declare const updatePartnerCustomParserUnmappedLabKeys: (partnerId: string, unknownMeasurementsBulk: UnknownMeasurementsBulk, ohtCoreApiKey: string) => Promise<void>;
 /**
  * Processes appended biomarker mappings by extracting values from additional labKeys
+ * Compatible with AnnotationPreviewService interface but returns object with text property
  * @param exams - Array of exam objects to search
  * @param labKeys - Array of labKey configurations with extraction paths
- * @returns String with extracted values from paths
+ * @param filename - Filename for logging purposes
+ * @param annotationConfig - Optional annotation configuration for maxLength, fallbackValue, separator
+ * @returns Object with success, text, error, and extractedValues properties
  */
-export declare function processAppendedMappings(exams: Exam[], labKeys: BackendBiomarkerMapping['annotationConfig']['labKeys']): string;
+export declare function processAppendedMappings(exams: any[], labKeys: AnnotationLabKey[], filename: string, annotationConfig?: {
+    maxLength?: number;
+    fallbackValue?: string;
+    separator?: string;
+    concatenationMode?: 'space' | 'newline' | 'comma';
+}): {
+    success: boolean;
+    text: string;
+    error?: string;
+    extractedValues: Array<{
+        labKey: string;
+        path: string;
+        value: string;
+        formatted: string;
+        required: boolean;
+        used: boolean;
+    }>;
+};
+/**
+ * Generate annotation preview from single exam data (ohapi compatibility)
+ * Wrapper function that converts single exam to array format for processAppendedMappings
+ * @param examData - Single exam data (OHTExam or JSON blob)
+ * @param annotationConfig - Annotation configuration
+ * @param targetLabKey - Target lab key for extraction
+ * @param extractionPaths - Array of extraction paths
+ * @param prefix - Optional prefix for the result
+ * @param suffix - Optional suffix for the result
+ * @returns AnnotationPreviewResult with extracted text and values
+ */
+export declare function generateAnnotationPreview(examData: any, annotationConfig: AnnotationConfig, targetLabKey: string, extractionPaths: ExtractionPath[], prefix?: string, suffix?: string): AnnotationPreviewResult;

package/dist/util-ts/dataUtils.js CHANGED Viewed

@@ -7,6 +7,7 @@ exports.updatePartnerCustomParserUnmappedLabKeys = exports.getMappedBiomarkers =
 exports.isBiomarkerValueNumerical = isBiomarkerValueNumerical;
 exports.isBiomarkerExternalNoVisualRange = isBiomarkerExternalNoVisualRange;
 exports.processAppendedMappings = processAppendedMappings;
+exports.generateAnnotationPreview = generateAnnotationPreview;
 const apiUtils_1 = require("./apiUtils");
 const pinoLogger_1 = __importDefault(require("./pinoLogger"));
 const logger = (0, pinoLogger_1.default)();
@@ -49,81 +50,305 @@ const updatePartnerCustomParserUnmappedLabKeys = async (partnerId, unknownMeasur
 exports.updatePartnerCustomParserUnmappedLabKeys = updatePartnerCustomParserUnmappedLabKeys;
 /**
  * Processes appended biomarker mappings by extracting values from additional labKeys
+ * Compatible with AnnotationPreviewService interface but returns object with text property
  * @param exams - Array of exam objects to search
  * @param labKeys - Array of labKey configurations with extraction paths
- * @returns String with extracted values from paths
+ * @param filename - Filename for logging purposes
+ * @param annotationConfig - Optional annotation configuration for maxLength, fallbackValue, separator
+ * @returns Object with success, text, error, and extractedValues properties
  */
-function processAppendedMappings(exams, labKeys) {
-    const extractedValues = [];
-    if (!exams || !labKeys) {
-        return '';
+function processAppendedMappings(exams, labKeys, filename, annotationConfig) {
+    if (!exams?.length || !labKeys?.length) {
+        return {
+            success: false,
+            text: '',
+            error: 'No exams or labKeys provided',
+            extractedValues: []
+        };
     }
-    logger.info(`Processing appended mapping with ${labKeys.length} additional labKeys`);
-    // Process each additional labKey
+    logger.info(`Processing appended mapping with ${labKeys.length} additional labKeys. filename: ${filename}`);
+    const allExtractedValues = [];
+    const labKeyResults = [];
     for (const additionalLabKey of labKeys) {
-        const additionalExam = exams.find(exam => exam.ohtExam.labKey === additionalLabKey.labKey);
-        if (!additionalExam) {
-            logger.warn(`Additional labKey ${additionalLabKey.labKey} not found for appended mapping`);
-            continue;
+        logger.info(`Processing labKey: ${additionalLabKey.labKey}, filename: ${filename}`);
+        // First try: Find exam by direct labKey match
+        let exam = exams.find(exam => exam?.labKey === additionalLabKey.labKey ||
+            exam?.ohtExam?.labKey === additionalLabKey.labKey);
+        let examData = null;
+        if (exam) {
+            logger.info(`Found exam by direct labKey match for: ${additionalLabKey.labKey}`);
+            // Use ohtExam data if available, otherwise use exam directly
+            examData = exam.ohtExam || exam;
         }
-        // Process extraction paths for this labKey
-        const labKeyValues = [];
-        for (const extractionPath of additionalLabKey.extractionPaths) {
-            // Extract value from path
-            const extractedValue = getNestedValue(additionalExam.ohtExam, extractionPath.path);
-            // Use defaultValue if no value extracted
-            const finalValue = extractedValue || extractionPath.defaultValue;
-            // Check if required path has no value and no default
-            if (extractionPath.required && !finalValue) {
-                const errorMessage = `appended biomarker information for ${additionalLabKey.labKey} not found`;
-                logger.warn(`Required extraction path ${extractionPath.path} not found for labKey ${additionalLabKey.labKey}`);
-                labKeyValues.push(errorMessage);
+        else {
+            logger.info(`Direct labKey not found, trying complex search for: ${additionalLabKey.labKey}`);
+            // Second try: labKey search for "labKeyFirstHalf:labKeySecondHalf" format
+            examData = findExamByLabKey(exams, additionalLabKey.labKey);
+            if (!examData) {
+                logger.warn(`Additional labKey ${additionalLabKey.labKey} not found for appended mapping, filename: ${filename}`);
                 continue;
             }
-            // Skip if no value and not required
-            if (!finalValue) {
-                continue;
+            else {
+                logger.info(`Found exam by complex search for: ${additionalLabKey.labKey}`);
             }
-            // Apply format if specified
-            let formattedValue = finalValue;
-            if (extractionPath.format) {
-                formattedValue = extractionPath.format.replace('%s', finalValue);
-            }
-            labKeyValues.push(formattedValue);
         }
-        // Combine values for this labKey with prefix and suffix
-        if (labKeyValues.length > 0) {
-            let combinedValue = labKeyValues.join(' ');
-            // Add prefix if specified
-            if (additionalLabKey.prefix) {
-                combinedValue = additionalLabKey.prefix + combinedValue;
+        const parts = [];
+        // Process each extraction path
+        for (const path of additionalLabKey.extractionPaths) {
+            // Extract raw value using enhanced path extraction
+            const rawValue = extractFromPath(examData, path.path);
+            const defaultValue = path.defaultValue || '';
+            const finalValue = rawValue || defaultValue;
+            // Apply format if specified
+            const formatted = applyFormat(finalValue, path.format);
+            // Track extracted values for detailed response
+            allExtractedValues.push({
+                labKey: additionalLabKey.labKey,
+                path: path.path,
+                value: finalValue,
+                formatted: formatted,
+                required: path.required,
+                used: !!formatted
+            });
+            // Handle required paths - if required and no value, fail the entire operation
+            if (path.required && !rawValue && !path.defaultValue) {
+                logger.warn(`Required extraction path ${path.path} not found for labKey ${additionalLabKey.labKey}, filename: ${filename}`);
+                return {
+                    success: false,
+                    text: '',
+                    error: `Required path '${path.path}' is missing for labKey '${additionalLabKey.labKey}'`,
+                    extractedValues: allExtractedValues
+                };
             }
-            // Add suffix if specified
-            if (additionalLabKey.suffix) {
-                combinedValue = combinedValue + additionalLabKey.suffix;
+            else if (formatted) {
+                // Only add non-empty formatted values
+                parts.push(formatted);
             }
-            extractedValues.push(combinedValue);
         }
+        // If no parts extracted, skip this labKey
+        if (!parts.length)
+            continue;
+        // Join parts with space and apply prefix/suffix
+        const combinedValue = parts.join(' ');
+        const finalResult = `${additionalLabKey.prefix || ''}${combinedValue}${additionalLabKey.suffix || ''}`;
+        labKeyResults.push(finalResult);
     }
-    return extractedValues.join(' ');
+    // Join results based on concatenationMode, separator, or default to space
+    let finalText = '';
+    if (annotationConfig?.concatenationMode) {
+        switch (annotationConfig.concatenationMode) {
+            case 'space':
+                finalText = labKeyResults.join(' ');
+                break;
+            case 'newline':
+                finalText = labKeyResults.join('\n');
+                break;
+            case 'comma':
+                finalText = labKeyResults.join(', ');
+                break;
+            default:
+                finalText = labKeyResults.join(annotationConfig?.separator || ' ');
+        }
+    }
+    else {
+        finalText = labKeyResults.join(annotationConfig?.separator || ' ');
+    }
+    // Apply max length if specified
+    if (annotationConfig?.maxLength && finalText.length > annotationConfig.maxLength) {
+        finalText = finalText.substring(0, annotationConfig.maxLength);
+    }
+    // Apply fallback value if no text and fallback is specified
+    if (!finalText && annotationConfig?.fallbackValue) {
+        finalText = annotationConfig.fallbackValue;
+    }
+    return {
+        success: true,
+        text: finalText,
+        extractedValues: allExtractedValues
+    };
 }
 /**
- * Helper function to get nested values from objects using dot notation
+ * Extract value from object using dot notation path
+ * Supports array indexing and wildcard expansion similar to AnnotationPreviewService
  * @param obj - Object to extract value from
- * @param path - Dot notation path (e.g., "description", "value", "unit")
+ * @param path - Dot notation path (e.g., "description", "value", "unit", "range[*].field", "array[0].field")
  * @returns Extracted value or null
  */
-function getNestedValue(obj, path) {
-    const keys = path.split('.');
-    let current = obj;
-    for (const key of keys) {
-        if (current && typeof current === 'object' && key in current) {
-            current = current[key];
-        }
-        else {
+function extractFromPath(obj, path) {
+    if (!obj || !path)
+        return null;
+    // Support range[*].field by flattening arrays and joining
+    if (path.includes('[*]')) {
+        const [arrKey, rest] = path.split('[*].');
+        const arr = obj?.[arrKey];
+        if (!Array.isArray(arr))
+            return null;
+        const values = arr.map((item) => extractFromPath(item, rest)).filter((v) => v);
+        const str = values.join(' ');
+        return str || null;
+    }
+    // Support array index range[n].field
+    const idxMatch = path.match(/(\w+)\[(\d+)\]\.?(.*)/);
+    if (idxMatch) {
+        const key = idxMatch[1];
+        const idx = parseInt(idxMatch[2], 10);
+        const rest = idxMatch[3];
+        const arr = obj?.[key];
+        if (!Array.isArray(arr) || !arr[idx])
+            return null;
+        return rest ? extractFromPath(arr[idx], rest) : String(arr[idx] ?? '');
+    }
+    // Dot path - standard navigation
+    const parts = path.split('.');
+    let cur = obj;
+    for (const part of parts) {
+        if (cur == null)
             return null;
+        cur = cur[part];
+    }
+    if (cur == null)
+        return null;
+    return String(cur);
+}
+/**
+ * Apply format string to value similar to AnnotationPreviewService
+ * @param value - Value to format
+ * @param format - Format string with %s placeholder
+ * @returns Formatted value
+ */
+function applyFormat(value, format) {
+    if (!format || !value)
+        return value;
+    try {
+        return format.replace(/%s/g, value);
+    }
+    catch {
+        return value;
+    }
+}
+/**
+ * Find exam data using  labKey search when direct labKey doesn't exist
+ * LabKey format: "labKeyFirstHalf:labKeySecondHalf" - searches for object with any key having value "labKeyFirstHalf"
+ * containing child object with any key having value "labKeySecondHalf"
+ * @param exams - Array of exam objects to search
+ * @param labKey - LabKey in format "labKeyFirstHalf:labKeySecondHalf"
+ * @returns Found exam data or null
+ */
+function findExamByLabKey(exams, labKey) {
+    if (!labKey || !labKey.includes(':'))
+        return null;
+    const [labKeyFirstHalf, labKeySecondHalf] = labKey.split(':');
+    if (!labKeyFirstHalf || !labKeySecondHalf)
+        return null;
+    // First, find exam with any key having value matching labKeyFirstHalf
+    const examWithlabKeyFirstHalf = exams.find(exam => {
+        const examData = exam.ohtExam || exam;
+        return findObjectWithValue(examData, labKeyFirstHalf);
+    });
+    if (!examWithlabKeyFirstHalf)
+        return null;
+    const examData = examWithlabKeyFirstHalf.ohtExam || examWithlabKeyFirstHalf;
+    // Then, find child object within that exam with any key having value matching labKeySecondHalf
+    return findChildObjectWithValue(examData, labKeySecondHalf);
+}
+/**
+ * Helper function to find if an object has any key with the specified value
+ * @param obj - Object to search
+ * @param targetValue - Value to search for
+ * @returns True if found, false otherwise
+ */
+function findObjectWithValue(obj, targetValue) {
+    if (!obj || typeof obj !== 'object')
+        return false;
+    // Check if any direct property has the target value
+    for (const key in obj) {
+        if (obj[key] === targetValue)
+            return true;
+    }
+    return false;
+}
+/**
+ * Helper function to find child object with any key having the specified value
+ * Searches recursively in arrays and nested objects
+ * @param parentObj - Parent object to search within
+ * @param targetValue - Value to search for
+ * @returns Found child object or null
+ */
+function findChildObjectWithValue(parentObj, targetValue) {
+    if (!parentObj || typeof parentObj !== 'object')
+        return null;
+    // Search in arrays first
+    for (const key in parentObj) {
+        const value = parentObj[key];
+        if (Array.isArray(value)) {
+            // Search within array items
+            for (const item of value) {
+                if (typeof item === 'object' && item !== null) {
+                    // Check if this item has the target value
+                    if (findObjectWithValue(item, targetValue)) {
+                        return item;
+                    }
+                    // Recursively search nested objects
+                    const nested = findChildObjectWithValue(item, targetValue);
+                    if (nested)
+                        return nested;
+                }
+            }
         }
+        else if (typeof value === 'object' && value !== null) {
+            // Check if this nested object has the target value
+            if (findObjectWithValue(value, targetValue)) {
+                return value;
+            }
+            // Recursively search deeper
+            const nested = findChildObjectWithValue(value, targetValue);
+            if (nested)
+                return nested;
+        }
+    }
+    return null;
+}
+/**
+ * Generate annotation preview from single exam data (ohapi compatibility)
+ * Wrapper function that converts single exam to array format for processAppendedMappings
+ * @param examData - Single exam data (OHTExam or JSON blob)
+ * @param annotationConfig - Annotation configuration
+ * @param targetLabKey - Target lab key for extraction
+ * @param extractionPaths - Array of extraction paths
+ * @param prefix - Optional prefix for the result
+ * @param suffix - Optional suffix for the result
+ * @returns AnnotationPreviewResult with extracted text and values
+ */
+function generateAnnotationPreview(examData, annotationConfig, targetLabKey, extractionPaths, prefix, suffix) {
+    if (!examData) {
+        return {
+            success: false,
+            text: '',
+            error: 'No exam data provided',
+            extractedValues: []
+        };
     }
-    return current ? String(current) : null;
+    // Convert single exam to array format expected by processAppendedMappings
+    const exams = [{
+            ohtExam: examData,
+            labKey: targetLabKey
+        }];
+    // Create AnnotationLabKey from provided parameters
+    const labKey = {
+        labKey: targetLabKey,
+        extractionPaths: extractionPaths,
+        required: false, // Not used in this context
+        prefix: prefix,
+        suffix: suffix
+    };
+    // Call processAppendedMappings with single exam
+    const result = processAppendedMappings(exams, [labKey], 'webapp-preview', // filename for logging
+    {
+        maxLength: annotationConfig.maxLength,
+        fallbackValue: annotationConfig.fallbackValue,
+        separator: annotationConfig.separator,
+        concatenationMode: annotationConfig.concatenationMode
+    });
+    return result;
 }
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package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@openhealth/oht-custom-parser-lib",
-  "version": "0.2.41",
+  "version": "0.2.43",
   "description": "Shared nodejs lib with with reusable functions",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",