@openhealth/oht-custom-parser-lib 0.1.19 → 0.1.20

package/dist/index.d.ts

@@ -4,7 +4,7 @@ export { ohtMeasurementsExtractor, checkValueForPlausibleValues, extractReferenc
 export { getSlackFileIssueNotificationMessage, sendMessageToSlack } from './service/slackMessages.service';
 export { aggregateMessages } from './service/errorHandling.service';
 export { LabToOhtContract, LabToOhtMapper, UnknownMeasurementExtraction, ReferenceAsAnnotation, UnitExtraction, RangeExtraction, RangeExtractionResponse, ValueExtraction, unitSynonyms, } from './types/custom-parser.types';
-export { AcfBiomarkerRangeAnnotationCheck, AcfBiomarkerGenericDisclaimerLogic, ManualCheck, BiomarkerCompatibility, ReferenceRangeType, AcfReferenceRange, VisualRange, NameAlias, AlternativeUnit, BiomarkerAcf, Biomarker, PipelineStep, DigitizationStatus, MeasurementValueComparator, BiomarkerValueType, DataImportFileUploadStatus, Sex, Digitization, PatientInfo, UnknownMeasurement, Measurement, DataImportFileUpload, MessagePayload, SignedUpload, ReportStyleConfig, LanguageCode, BiomarkerCustomisation, PartnerCustomPanel, ReportDisplaySettings, ReportCustomisation, OHTPartner, } from './types/oht.types';
+export { AcfBiomarkerRangeAnnotationCheck, AcfBiomarkerGenericDisclaimerLogic, ManualCheck, BiomarkerCompatibility, ReferenceRangeType, AcfReferenceRange, VisualRange, NameAlias, AlternativeUnit, BiomarkerAcf, Biomarker, PipelineStep, DigitizationStatus, MeasurementValueComparator, BiomarkerValueType, DataImportFileUploadStatus, Sex, Digitization, PatientInfo, UnknownMeasurement, Measurement, DataImportFileUpload, MessagePayload, SignedUpload, ReportStyleConfig, LanguageCode, BiomarkerCustomisation, PartnerCustomPanel, ReportDisplaySettings, ReportCustomisation, OHTPartner, UploadType, } from './types/oht.types';
 export { ErrorMessage } from './types/error.types';
 export { extractValue, isBiomarkerValueNumerical, isBiomarkerExternalNoVisualRange } from './util-ts/dataUtils';
 export { readFileFromBucket, uploadFileBufferToGCS } from './util-ts/googleStorageUtils';

package/dist/index.js

@@ -3,7 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getLowerThanPatterns = exports.getGreaterThanPatterns = exports.pinoLogger = exports.uploadFileBufferToGCS = exports.readFileFromBucket = exports.isBiomarkerExternalNoVisualRange = exports.isBiomarkerValueNumerical = exports.extractValue = exports.Sex = exports.DataImportFileUploadStatus = exports.BiomarkerValueType = exports.MeasurementValueComparator = exports.DigitizationStatus = exports.PipelineStep = exports.ReferenceRangeType = exports.BiomarkerCompatibility = exports.ManualCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.AcfBiomarkerRangeAnnotationCheck = exports.unitSynonyms = exports.aggregateMessages = exports.sendMessageToSlack = exports.getSlackFileIssueNotificationMessage = exports.extractValueFromGreaterLowerThan = exports.extractUnit = exports.getRangeFromPositionAndRegex = exports.parseExamValue = exports.extractReferenceAnnotation = exports.extractReferenceRanges = exports.checkValueForPlausibleValues = exports.ohtMeasurementsExtractor = exports.postFileUploadSetStatus = exports.queryFileUploadsWithFilters = exports.handleRejection = exports.isPatientAgeValid = exports.parseGender = exports.parseExternalPatientId = exports.parseErrorObj = exports.makeApiCallWithRetry = exports.postDataImportFileUploadToCore = void 0;
+exports.getLowerThanPatterns = exports.getGreaterThanPatterns = exports.pinoLogger = exports.uploadFileBufferToGCS = exports.readFileFromBucket = exports.isBiomarkerExternalNoVisualRange = exports.isBiomarkerValueNumerical = exports.extractValue = exports.UploadType = exports.Sex = exports.DataImportFileUploadStatus = exports.BiomarkerValueType = exports.MeasurementValueComparator = exports.DigitizationStatus = exports.PipelineStep = exports.ReferenceRangeType = exports.BiomarkerCompatibility = exports.ManualCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.AcfBiomarkerRangeAnnotationCheck = exports.unitSynonyms = exports.aggregateMessages = exports.sendMessageToSlack = exports.getSlackFileIssueNotificationMessage = exports.extractValueFromGreaterLowerThan = exports.extractUnit = exports.getRangeFromPositionAndRegex = exports.parseExamValue = exports.extractReferenceAnnotation = exports.extractReferenceRanges = exports.checkValueForPlausibleValues = exports.ohtMeasurementsExtractor = exports.postFileUploadSetStatus = exports.queryFileUploadsWithFilters = exports.handleRejection = exports.isPatientAgeValid = exports.parseGender = exports.parseExternalPatientId = exports.parseErrorObj = exports.makeApiCallWithRetry = exports.postDataImportFileUploadToCore = void 0;
 // ### SERVICES ###
 var reportCreator_service_1 = require("./service/reportCreator.service");
 Object.defineProperty(exports, "postDataImportFileUploadToCore", { enumerable: true, get: function () { return reportCreator_service_1.postDataImportFileUploadToCore; } });
@@ -45,6 +45,7 @@ Object.defineProperty(exports, "MeasurementValueComparator", { enumerable: true,
 Object.defineProperty(exports, "BiomarkerValueType", { enumerable: true, get: function () { return oht_types_1.BiomarkerValueType; } });
 Object.defineProperty(exports, "DataImportFileUploadStatus", { enumerable: true, get: function () { return oht_types_1.DataImportFileUploadStatus; } });
 Object.defineProperty(exports, "Sex", { enumerable: true, get: function () { return oht_types_1.Sex; } });
+Object.defineProperty(exports, "UploadType", { enumerable: true, get: function () { return oht_types_1.UploadType; } });
 // ### UTIL-TS ###
 var dataUtils_1 = require("./util-ts/dataUtils");
 Object.defineProperty(exports, "extractValue", { enumerable: true, get: function () { return dataUtils_1.extractValue; } });

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../index.ts"],"names":[],"mappings":";;;;;;AAAA,mBAAmB;AACnB,yEAEyC;AADvC,uIAAA,8BAA8B,OAAA;AAAE,6HAAA,oBAAoB,OAAA;AAAE,sHAAA,aAAa,OAAA;AAErE,mFAO8C;AAN5C,oIAAA,sBAAsB,OAAA;AACtB,yHAAA,WAAW,OAAA;AACX,+HAAA,iBAAiB,OAAA;AACjB,6HAAA,eAAe,OAAA;AACf,yIAAA,2BAA2B,OAAA;AAC3B,qIAAA,uBAAuB,OAAA;AAEzB,+FASoD;AARlD,4IAAA,wBAAwB,OAAA;AACxB,gJAAA,4BAA4B,OAAA;AAC5B,0IAAA,sBAAsB,OAAA;AACtB,8IAAA,0BAA0B,OAAA;AAC1B,kIAAA,cAAc,OAAA;AACd,gJAAA,4BAA4B,OAAA;AAC5B,+HAAA,WAAW,OAAA;AACX,oJAAA,gCAAgC,OAAA;AAElC,yEAEyC;AADvC,6IAAA,oCAAoC,OAAA;AAAE,2HAAA,kBAAkB,OAAA;AAE1D,yEAEyC;AADvC,0HAAA,iBAAiB,OAAA;AAGnB,gBAAgB;AAChB,mEAUqC;AADnC,mHAAA,YAAY,OAAA;AAEd,+CAiC2B;AAhCzB,6HAAA,gCAAgC,OAAA;AAChC,+HAAA,kCAAkC,OAAA;AAClC,wGAAA,WAAW,OAAA;AACX,mHAAA,sBAAsB,OAAA;AACtB,+GAAA,kBAAkB,OAAA;AAOlB,yGAAA,YAAY,OAAA;AACZ,+GAAA,kBAAkB,OAAA;AAClB,uHAAA,0BAA0B,OAAA;AAC1B,+GAAA,kBAAkB,OAAA;AAClB,uHAAA,0BAA0B,OAAA;AAC1B,gGAAA,GAAG,OAAA;AAeH,uGAAA,UAAU,OAAA;AAIZ,kBAAkB;AAClB,iDAA8G;AAAtG,yGAAA,YAAY,OAAA;AAAE,sHAAA,yBAAyB,OAAA;AAAE,6HAAA,gCAAgC,OAAA;AACjF,mEAAuF;AAA/E,wHAAA,kBAAkB,OAAA;AAAE,2HAAA,qBAAqB,OAAA;AACjD,mDAA2D;AAAnD,yHAAA,OAAO,OAAc;AAC7B,mDAAkF;AAA1E,oHAAA,sBAAsB,OAAA;AAAE,kHAAA,oBAAoB,OAAA"}

package/dist/types/oht.types.d.ts

@@ -85,7 +85,7 @@ export type DataImportFileUpload = {
     fileSizeBytes: number;
     uploadedByUserId: string;
     status: DataImportFileUploadStatus;
-    uploadType: UploadTypes;
+    uploadType: UploadType;
     isArchived: boolean;
     isDeleted: boolean;
     lastProcessedByUserId?: string;
@@ -158,7 +158,7 @@ export declare enum Sex {
     FEMALE = "FEMALE",
     OTHER = "OTHER"
 }
-export declare enum UploadTypes {
+export declare enum UploadType {
     CLINICAL_ANALYSIS = "CLINICAL_ANALYSIS",
     OTHER = "OTHER"
 }

package/dist/types/oht.types.js

@@ -1,17 +1,17 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.AcfBiomarkerRangeAnnotationCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.ManualCheck = exports.BiomarkerCompatibility = exports.ReferenceRangeType = exports.GoLiveStatus = exports.PipelineStep = exports.DigitizationStatus = exports.MeasurementValueComparator = exports.BiomarkerValueType = exports.DataImportFileUploadStatus = exports.UploadTypes = exports.Sex = void 0;
+exports.AcfBiomarkerRangeAnnotationCheck = exports.AcfBiomarkerGenericDisclaimerLogic = exports.ManualCheck = exports.BiomarkerCompatibility = exports.ReferenceRangeType = exports.GoLiveStatus = exports.PipelineStep = exports.DigitizationStatus = exports.MeasurementValueComparator = exports.BiomarkerValueType = exports.DataImportFileUploadStatus = exports.UploadType = exports.Sex = void 0;
 var Sex;
 (function (Sex) {
     Sex["MALE"] = "MALE";
     Sex["FEMALE"] = "FEMALE";
     Sex["OTHER"] = "OTHER";
 })(Sex || (exports.Sex = Sex = {}));
-var UploadTypes;
-(function (UploadTypes) {
-    UploadTypes["CLINICAL_ANALYSIS"] = "CLINICAL_ANALYSIS";
-    UploadTypes["OTHER"] = "OTHER";
-})(UploadTypes || (exports.UploadTypes = UploadTypes = {}));
+var UploadType;
+(function (UploadType) {
+    UploadType["CLINICAL_ANALYSIS"] = "CLINICAL_ANALYSIS";
+    UploadType["OTHER"] = "OTHER";
+})(UploadType || (exports.UploadType = UploadType = {}));
 var DataImportFileUploadStatus;
 (function (DataImportFileUploadStatus) {
     DataImportFileUploadStatus["UPLOADED"] = "UPLOADED";

package/dist/types/oht.types.js.map

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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@openhealth/oht-custom-parser-lib",
-  "version": "0.1.19",
+  "version": "0.1.20",
   "description": "Shared nodejs lib with with reusable functions",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",