@opencor/opencor 0.20250826.0 → 0.20250827.1

package/README.md

@@ -45,7 +45,7 @@ import '@opencor/opencor/style.css'
 </script>
 ```
 
-### With `omex` prop provided
+### `omex` prop provided
 
 When an `omex` prop is provided, the component goes straight into OpenCOR's simulation mode, using the specified OMEX file.
 

package/dist/opencor.es.js

@@ -8181,7 +8181,7 @@ async function wf() {
       console.error("Failed to load libOpenCOR's WebAssembly module:", n);
     }
 }
-const kf = "0.20250826.0", Cf = { class: "space-y-7" }, Sf = { class: "text-center" }, xf = { class: "text-3xl font-bold" }, If = {
+const kf = "0.20250827.1", Cf = { class: "space-y-7" }, Sf = { class: "text-center" }, xf = { class: "text-3xl font-bold" }, If = {
   key: 0,
   class: "text-xl italic font-bold"
 }, Mf = { class: "text-sm italic" }, Bf = { class: "space-y-2" }, Rf = /* @__PURE__ */ Ie({

package/package.json

@@ -9,7 +9,6 @@
   "description": "A Web-based modelling environment for organising, editing, simulating, and analysing CellML files.",
   "files": [
     "dist",
-    "src",
     "README.md",
     "LICENSE"
   ],
@@ -40,26 +39,24 @@
     },
     "./style.css": "./dist/opencor.css"
   },
-  "version": "0.20250826.0",
+  "version": "0.20250827.1",
   "peerDependencies": {
     "vue": "^3.4.21"
   },
   "dependencies": {
     "@primeuix/themes": "^1.2.3",
     "@primevue/auto-import-resolver": "4.2.5",
-    "@tailwindcss/postcss": "^4.1.12",
-    "@tailwindcss/vite": "^4.1.12",
     "@vueuse/core": "12.8.2",
     "js-cookie": "^3.0.5",
     "jsonschema": "^1.5.0",
     "primeicons": "^7.0.0",
     "primevue": "4.2.5",
     "quill": "^2.0.3",
-    "tailwindcss": "^4.1.12",
-    "tailwindcss-primeui": "^0.6.1",
     "ua-parser-js": "^2.0.4"
   },
   "devDependencies": {
+    "@tailwindcss/postcss": "^4.1.12",
+    "@tailwindcss/vite": "^4.1.12",
     "@types/js-cookie": "^3.0.6",
     "@types/node": "^24.3.0",
     "@types/plotly.js": "3.0.3",
@@ -70,6 +67,8 @@
     "autoprefixer": "^10.4.21",
     "eslint": "^9.34.0",
     "prettier": "^3.6.2",
+    "tailwindcss": "^4.1.12",
+    "tailwindcss-primeui": "^0.6.1",
     "unplugin-vue-components": "^29.0.0",
     "vite": "^7.1.3"
   },

package/src/App.vue

@@ -1,7 +0,0 @@
-<template>
-  <OpenCOR />
-  <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/lorenz.cellml" /> -->
-  <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/lorenz.omex" /> -->
-  <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/ui/lorenz.omex" /> -->
-  <!-- <OpenCOR omex="https://models.physiomeproject.org/workspace/b7c/rawfile/e0ae8d2d56aaaa091e23e1ee7e84cacbda1dfb6b/lorenz.omex" /> -->
-</template>

package/src/ContainerApp.vue

@@ -1,21 +0,0 @@
-<template>
-  <div class="h-screen">
-    <Splitter class="h-full" layout="vertical">
-      <SplitterPanel class="flex items-center justify-center bg-blue-500" :size="15">Top panel...</SplitterPanel>
-      <SplitterPanel :size="50">
-        <Splitter>
-          <SplitterPanel class="flex items-center justify-center bg-red-500" :size="15">Left panel...</SplitterPanel>
-          <SplitterPanel :size="50">
-            <OpenCOR />
-            <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/lorenz.cellml" /> -->
-            <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/lorenz.omex" /> -->
-            <!-- <OpenCOR omex="https://raw.githubusercontent.com/opencor/webapp/refs/heads/main/tests/models/ui/lorenz.omex" /> -->
-            <!-- <OpenCOR omex="https://models.physiomeproject.org/workspace/b7c/rawfile/e0ae8d2d56aaaa091e23e1ee7e84cacbda1dfb6b/lorenz.omex" /> -->
-          </SplitterPanel>
-          <SplitterPanel class="flex items-center justify-center bg-red-500" :size="35">Right panel...</SplitterPanel>
-        </Splitter>
-      </SplitterPanel>
-      <SplitterPanel class="flex items-center justify-center bg-blue-500" :size="35">Bottom panel...</SplitterPanel>
-    </Splitter>
-  </div>
-</template>

package/src/assets/app.css

@@ -1,14 +0,0 @@
-@import './base.css';
-
-body {
-  background-color: var(--p-content-background);
-  color: var(--p-content-color);
-}
-
-a {
-  color: var(--p-button-link-color);
-}
-
-:focus {
-  outline: none !important;
-}

package/src/assets/base.css

@@ -1,31 +0,0 @@
-@import 'tailwindcss';
-@import 'tailwindcss-primeui';
-
-:root {
-  --border-color: var(--p-content-border-color);
-}
-
-body {
-  margin: 0;
-  font-family:
-    Inter,
-    -apple-system,
-    BlinkMacSystemFont,
-    'Segoe UI',
-    Roboto,
-    Oxygen,
-    Ubuntu,
-    Cantarell,
-    'Fira Sans',
-    'Droid Sans',
-    'Helvetica Neue',
-    sans-serif;
-  text-rendering: optimizeLegibility;
-  -webkit-font-smoothing: antialiased;
-  -moz-osx-font-smoothing: grayscale;
-  user-select: none;
-}
-
-.p-component {
-  transition: none !important;
-}

package/src/assets/logo.svg

@@ -1,17 +0,0 @@
-<svg xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" id="OpenCOR logo" xml:space="preserve" height="704.92" width="828.12" version="1.1">
-    <defs>
-        <style>
-        @font-face {
-            font-family: "Brush Script MT";
-            src: 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-        }
-        </style>
-    </defs>
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package/src/common/common.ts

@@ -1,86 +0,0 @@
-import { UAParser } from 'ua-parser-js'
-
-import { electronApi } from './electronApi.js'
-
-// Some interfaces.
-
-export interface ISettingsGeneral {
-  checkForUpdatesAtStartup: boolean
-}
-
-export interface ISettings {
-  general: ISettingsGeneral
-}
-
-// Some methods to determine the operating system, whether the application is running on a mobile device, etc.
-
-const uaParser = new UAParser()
-
-export function isWindows(): boolean {
-  return uaParser.getOS().name === 'Windows'
-}
-
-export function isLinux(): boolean {
-  return uaParser.getOS().name === 'Linux'
-}
-
-export function isMacOs(): boolean {
-  return uaParser.getOS().name === 'macOS'
-}
-
-export function isMobile(): boolean {
-  return uaParser.getDevice().type === 'mobile'
-}
-
-// A method to determine whether the Ctrl or Cmd key is pressed, depending on the operating system.
-
-export function isCtrlOrCmd(event: KeyboardEvent): boolean {
-  return isMacOs() ? event.metaKey : event.ctrlKey
-}
-
-// A method to enable/disable the main menu.
-
-export function enableDisableMainMenu(enable: boolean): void {
-  electronApi?.enableDisableMainMenu(enable)
-}
-
-// A method to format a given number of milliseconds into a string.
-
-export function formatTime(time: number): string {
-  const ms = Math.floor(time % 1000)
-  const s = Math.floor((time / 1000) % 60)
-  const m = Math.floor((time / (1000 * 60)) % 60)
-  const h = Math.floor((time / (1000 * 60 * 60)) % 24)
-  const d = Math.floor((time / (1000 * 60 * 60 * 24)) % 24)
-  let res = ''
-
-  if (d !== 0 || ((h !== 0 || m !== 0 || s !== 0 || ms !== 0) && res !== '')) {
-    res += `${res === '' ? '' : ' '}${String(d)}d`
-  }
-
-  if (h !== 0 || ((m !== 0 || s !== 0 || ms !== 0) && res !== '')) {
-    res += `${res === '' ? '' : ' '}${String(h)}h`
-  }
-
-  if (m !== 0 || ((s !== 0 || ms !== 0) && res !== '')) {
-    res += `${res === '' ? '' : ' '}${String(m)}m`
-  }
-
-  if (s !== 0 || (ms !== 0 && res !== '')) {
-    res += `${res === '' ? '' : ' '}${String(s)}s`
-  }
-
-  if (ms !== 0 || res === '') {
-    res += `${res === '' ? '' : ' '}${String(ms)}ms`
-  }
-
-  return res
-}
-
-// A method to format an issue, i.e. make sure that it starts with a capital letter and ends with a period.
-
-export function formatIssue(issue: string): string {
-  issue = issue.charAt(0).toUpperCase() + issue.slice(1)
-
-  return issue.endsWith('.') ? issue : `${issue}.`
-}

package/src/common/constants.ts

@@ -1,12 +0,0 @@
-export const URI_SCHEME = 'opencor'
-export const FULL_URI_SCHEME = `${URI_SCHEME}://`
-
-export const SHORT_DELAY = 69
-export const MEDIUM_DELAY = 169
-export const LONG_DELAY = 369
-
-export const TOAST_LIFE = 3000
-
-const currentYear = new Date().getFullYear()
-
-export const COPYRIGHT = currentYear === 2025 ? '2025' : `2025-${String(currentYear)}`

package/src/common/electron.ts

@@ -1,23 +0,0 @@
-import { is } from '@electron-toolkit/utils'
-
-import electron from 'electron'
-
-export function isPackaged(): boolean {
-  return electron.app.isPackaged
-}
-
-export function isDevMode(): boolean {
-  return is.dev && !!process.env.ELECTRON_RENDERER_URL
-}
-
-export function isWindows(): boolean {
-  return process.platform === 'win32'
-}
-
-export function isLinux(): boolean {
-  return process.platform === 'linux'
-}
-
-export function isMacOs(): boolean {
-  return process.platform === 'darwin'
-}

package/src/common/electronApi.ts

@@ -1,63 +0,0 @@
-import { type ISettings } from './common.js'
-
-export interface ISplashScreenInfo {
-  copyright: string
-  version: string
-}
-
-interface IElectronApi {
-  // Note: this must be in sync with src/preload/index.ts.
-
-  // Some general methods.
-
-  operatingSystem: () => string
-
-  // Splash screen window.
-
-  onInitSplashScreenWindow: (callback: (info: ISplashScreenInfo) => void) => void
-
-  // Renderer process asking the main process to do something for it.
-
-  checkForUpdates: (atStartup: boolean) => void
-  downloadAndInstallUpdate: () => void
-  enableDisableMainMenu: (enable: boolean) => void
-  enableDisableFileCloseAndCloseAllMenuItems: (enable: boolean) => void
-  fileClosed: (filePath: string) => void
-  fileIssue: (filePath: string) => void
-  fileOpened: (filePath: string) => void
-  filePath: (file: File) => string
-  fileSelected(filePath: string): void
-  filesOpened(filePaths: string[]): void
-  installUpdateAndRestart: () => void
-  loadSettings: () => Promise<ISettings>
-  resetAll: () => void
-  saveSettings: (settings: ISettings) => void
-
-  // Renderer process listening to the main process.
-
-  onAbout: (callback: () => void) => void
-  onAction: (callback: (action: string) => void) => void
-  onCheckForUpdates: (callback: () => void) => void
-  onEnableDisableUi: (callback: (enable: boolean) => void) => void
-  onOpen: (callback: (filePath: string) => void) => void
-  onOpenRemote: (callback: () => void) => void
-  onOpenSampleLorenz: (callback: () => void) => void
-  onOpenSampleInteractiveLorenz: (callback: () => void) => void
-  onClose: (callback: () => void) => void
-  onCloseAll: (callback: () => void) => void
-  onResetAll: (callback: () => void) => void
-  onSelect: (callback: (filePath: string) => void) => void
-  onSettings: (callback: () => void) => void
-  onUpdateAvailable: (callback: (version: string) => void) => void
-  onUpdateCheckError: (callback: (issue: string) => void) => void
-  onUpdateDownloaded: (callback: () => void) => void
-  onUpdateDownloadError: (callback: (issue: string) => void) => void
-  onUpdateDownloadProgress: (callback: (percent: number) => void) => void
-  onUpdateNotAvailable: (callback: () => void) => void
-}
-
-interface IWindow {
-  electronApi: IElectronApi
-}
-
-export const electronApi: IElectronApi | undefined = (window as unknown as IWindow).electronApi

package/src/common/locCommon.ts

@@ -1,170 +0,0 @@
-import { electronApi } from './electronApi.js'
-import * as locApi from '../libopencor/locApi.js'
-
-// Some file-related methods.
-
-export function proxyUrl(url: string): string {
-  return `https://corsproxy.io/?url=${encodeURIComponent(url)}`
-}
-
-export function isRemoteFilePath(filePath: string): boolean {
-  return filePath.startsWith('http://') || filePath.startsWith('https://')
-}
-
-export function filePath(fileOrFilePath: string | File): string {
-  return fileOrFilePath instanceof File
-    ? electronApi !== undefined
-      ? electronApi.filePath(fileOrFilePath)
-      : fileOrFilePath.name
-    : fileOrFilePath
-}
-
-export function file(fileOrFilePath: string | File): Promise<locApi.File> {
-  if (typeof fileOrFilePath === 'string') {
-    if (isRemoteFilePath(fileOrFilePath)) {
-      return new Promise((resolve, reject) => {
-        fetch(proxyUrl(fileOrFilePath))
-          .then((response) => {
-            if (response.ok) {
-              return response.arrayBuffer()
-            }
-
-            throw new Error(`The server responded with a status of ${String(response.status)}.`)
-          })
-          .then((arrayBuffer) => {
-            const fileContents = new Uint8Array(arrayBuffer)
-
-            resolve(new locApi.File(filePath(fileOrFilePath), fileContents))
-          })
-          .catch((error: unknown) => {
-            reject(error instanceof Error ? error : new Error(String(error)))
-          })
-      })
-    }
-
-    return new Promise((resolve, reject) => {
-      if (electronApi !== undefined) {
-        resolve(new locApi.File(filePath(fileOrFilePath)))
-      } else {
-        reject(new Error('Local files cannot be opened.'))
-      }
-    })
-  }
-
-  return new Promise((resolve, reject) => {
-    fileOrFilePath
-      .arrayBuffer()
-      .then((arrayBuffer) => {
-        const fileContents = new Uint8Array(arrayBuffer)
-
-        resolve(new locApi.File(filePath(fileOrFilePath), fileContents))
-      })
-      .catch((error: unknown) => {
-        reject(error instanceof Error ? error : new Error(String(error)))
-      })
-  })
-}
-
-// A method to retrieve the simulation data information for a given name from an instance task.
-
-export enum ESimulationDataInfoType {
-  UNKNOWN,
-  VOI,
-  STATE,
-  RATE,
-  CONSTANT,
-  COMPUTED_CONSTANT,
-  ALGEBRAIC
-}
-
-export interface ISimulationDataInfo {
-  type: ESimulationDataInfoType
-  index: number
-}
-
-export function simulationDataInfo(instanceTask: locApi.SedInstanceTask, name: string): ISimulationDataInfo {
-  if (name === '') {
-    return {
-      type: ESimulationDataInfoType.UNKNOWN,
-      index: -1
-    }
-  }
-
-  if (name === instanceTask.voiName()) {
-    return {
-      type: ESimulationDataInfoType.VOI,
-      index: -1
-    }
-  }
-
-  for (let i = 0; i < instanceTask.stateCount(); i++) {
-    if (name === instanceTask.stateName(i)) {
-      return {
-        type: ESimulationDataInfoType.STATE,
-        index: i
-      }
-    }
-  }
-
-  for (let i = 0; i < instanceTask.rateCount(); i++) {
-    if (name === instanceTask.rateName(i)) {
-      return {
-        type: ESimulationDataInfoType.RATE,
-        index: i
-      }
-    }
-  }
-
-  for (let i = 0; i < instanceTask.constantCount(); i++) {
-    if (name === instanceTask.constantName(i)) {
-      return {
-        type: ESimulationDataInfoType.CONSTANT,
-        index: i
-      }
-    }
-  }
-
-  for (let i = 0; i < instanceTask.computedConstantCount(); i++) {
-    if (name === instanceTask.computedConstantName(i)) {
-      return {
-        type: ESimulationDataInfoType.COMPUTED_CONSTANT,
-        index: i
-      }
-    }
-  }
-
-  for (let i = 0; i < instanceTask.algebraicCount(); i++) {
-    if (name === instanceTask.algebraicName(i)) {
-      return {
-        type: ESimulationDataInfoType.ALGEBRAIC,
-        index: i
-      }
-    }
-  }
-
-  return {
-    type: ESimulationDataInfoType.UNKNOWN,
-    index: -1
-  }
-}
-
-// A method to retrieve the simulation data for a given name from an instance task.
-
-export function simulationData(instanceTask: locApi.SedInstanceTask, info: ISimulationDataInfo): number[] {
-  switch (info.type) {
-    case ESimulationDataInfoType.VOI:
-      return instanceTask.voi()
-    case ESimulationDataInfoType.STATE:
-      return instanceTask.state(info.index)
-    case ESimulationDataInfoType.RATE:
-      return instanceTask.rate(info.index)
-    case ESimulationDataInfoType.CONSTANT:
-      return instanceTask.constant(info.index)
-    case ESimulationDataInfoType.COMPUTED_CONSTANT:
-      return instanceTask.computedConstant(info.index)
-    case ESimulationDataInfoType.ALGEBRAIC:
-      return instanceTask.algebraic(info.index)
-    default:
-      return []
-  }
-}

package/src/common/settings.ts

@@ -1,95 +0,0 @@
-import jsCookie from 'js-cookie'
-
-import { type ISettings, type ISettingsGeneral } from './common.js'
-import { electronApi } from './electronApi.js'
-
-class Settings {
-  private static _instance: Settings | null = null
-  private _settings!: ISettings
-  private _isInitialised = false
-  private _initialisationListeners: (() => void)[] = []
-
-  private constructor() {
-    // Start with some default settings and then load them.
-    // Note: to have default settings is critical when running the desktop version of OpenCOR since they are loaded
-    //       asynchronously, so we need to ensure that our settings are always defined. This is not the case for the
-    //       web version of OpenCOR, where we can load our settings directly from the cookies.
-
-    this.reset()
-    this.load()
-  }
-
-  static instance(): Settings {
-    this._instance ??= new Settings()
-
-    return this._instance
-  }
-
-  private emitInitialised(): void {
-    this._isInitialised = true
-
-    this._initialisationListeners.forEach((callback) => {
-      callback()
-    })
-
-    this._initialisationListeners = []
-  }
-
-  onInitialised(callback: () => void): void {
-    if (this._isInitialised) {
-      callback()
-    } else {
-      this._initialisationListeners.push(callback)
-    }
-  }
-
-  load(): void {
-    if (electronApi !== undefined) {
-      void electronApi.loadSettings().then((settings: ISettings) => {
-        this._settings = settings
-
-        this.emitInitialised()
-      })
-    } else {
-      const cookieData = jsCookie.get('settings')
-
-      if (cookieData !== undefined) {
-        try {
-          this._settings = JSON.parse(cookieData)
-        } catch (error: unknown) {
-          console.error('Failed to parse settings from cookie, so resetting to defaults:', error)
-
-          this.reset()
-        }
-      }
-
-      this.emitInitialised()
-    }
-  }
-
-  save(): void {
-    if (electronApi !== undefined) {
-      electronApi.saveSettings(this._settings)
-    } else {
-      jsCookie.set('settings', JSON.stringify(this._settings), { expires: 365 })
-    }
-  }
-
-  reset(): void {
-    this._settings = {
-      general: {
-        checkForUpdatesAtStartup: true
-      }
-    }
-  }
-
-  toString(): string {
-    return JSON.stringify(this._settings, null, 2)
-  }
-
-  get general(): ISettingsGeneral {
-    return this._settings.general
-  }
-}
-
-export const settings = Settings.instance()