@opencloning/utils 2.0.0 → 2.1.1

package/CHANGELOG.md

@@ -1,5 +1,21 @@
 # @opencloning/utils
 
+## 2.1.1
+
+### Patch Changes
+
+- [#790](https://github.com/OpenCloning/OpenCloning_frontend/pull/790) [`0b2a21d`](https://github.com/OpenCloning/OpenCloning_frontend/commit/0b2a21dde79f5539579bee39f0de49b01cd6c10c) Thanks [@manulera](https://github.com/manulera)! - Support for fetchin sequences created by the OC mcp server
+
+- Updated dependencies []:
+  - @opencloning/store@2.1.1
+
+## 2.1.0
+
+### Patch Changes
+
+- Updated dependencies []:
+  - @opencloning/store@2.1.0
+
 ## 2.0.0
 
 ### Major Changes

package/package.json

@@ -1,7 +1,7 @@
 {
   "license": "MIT",
   "name": "@opencloning/utils",
-  "version": "2.0.0",
+  "version": "2.1.1",
   "type": "module",
   "main": "./src/utils/index.js",
   "exports": {
@@ -33,7 +33,7 @@
     "directory": "packages/utils"
   },
   "dependencies": {
-    "@opencloning/store": "2.0.0",
+    "@opencloning/store": "2.1.1",
     "@teselagen/bio-parsers": "^0.4.38",
     "@teselagen/sequence-utils": "^0.3.42",
     "@zip.js/zip.js": "^2.8.26",

package/src/config/urlWhitelist.js

@@ -20,4 +20,6 @@ export default [
   'https://api.ncbi.nlm.nih.gov/datasets/v2alpha/taxonomy/taxon_suggest',
   'https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/taxon',
   'https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession',
+  // OpenCloning MCP server, set at build time
+  ...(import.meta.env.VITE_MCP_SERVER_URL ? [import.meta.env.VITE_MCP_SERVER_URL] : []),
 ];

package/src/utils/error2String.js

@@ -1,6 +1,7 @@
 export default function error2String(error) {
   if (error.code === 'ERR_NETWORK') { return 'Cannot connect to backend server'; }
-  if (!error.code) {
+  // No response from the server (e.g. timeout), or not a request error
+  if (!error.code || !error.response) {
     return error.message;
   }
   const { detail } = error.response.data;

package/src/utils/error2String.test.js

@@ -0,0 +1,26 @@
+import error2String from './error2String';
+
+describe('error2String', () => {
+  it('returns the message of errors that are not from a request', () => {
+    expect(error2String(new Error('Something failed'))).toBe('Something failed');
+  });
+
+  it('returns the message of request errors without a response (e.g. timeout)', () => {
+    const error = Object.assign(new Error('timeout of 1000ms exceeded'), { code: 'ECONNABORTED' });
+    expect(error2String(error)).toBe('timeout of 1000ms exceeded');
+  });
+
+  it('handles network errors', () => {
+    expect(error2String({ code: 'ERR_NETWORK', message: 'Network Error' })).toBe('Cannot connect to backend server');
+  });
+
+  it('returns the detail of the response', () => {
+    const error = { code: 'ERR_BAD_REQUEST', response: { status: 400, data: { detail: 'Bad input' } } };
+    expect(error2String(error)).toBe('Bad input');
+  });
+
+  it('handles server errors', () => {
+    const error = { code: 'ERR_BAD_RESPONSE', response: { status: 500, data: {} } };
+    expect(error2String(error)).toBe('Internal server error');
+  });
+});