@opencloning/ui 1.4.1 → 1.4.2

package/CHANGELOG.md

@@ -1,5 +1,15 @@
 # @opencloning/ui
 
+## 1.4.2
+
+### Patch Changes
+
+- [#620](https://github.com/manulera/OpenCloning_frontend/pull/620) [`1c2dbef`](https://github.com/manulera/OpenCloning_frontend/commit/1c2dbef236d54b4980599cd6acc4fdabced13f1d) Thanks [@manulera](https://github.com/manulera)! - Fix assembler using BsaI by default always
+
+- Updated dependencies []:
+  - @opencloning/store@1.4.2
+  - @opencloning/utils@1.4.2
+
 ## 1.4.1
 
 ### Patch Changes

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@opencloning/ui",
-  "version": "1.4.1",
+  "version": "1.4.2",
   "type": "module",
   "main": "./src/index.js",
   "scripts": {
@@ -25,8 +25,8 @@
     "@emotion/styled": "^11.14.0",
     "@mui/icons-material": "^5.15.17",
     "@mui/material": "^5.15.17",
-    "@opencloning/store": "1.4.1",
-    "@opencloning/utils": "1.4.1",
+    "@opencloning/store": "1.4.2",
+    "@opencloning/utils": "1.4.2",
     "@teselagen/bio-parsers": "^0.4.34",
     "@teselagen/ove": "^0.8.34",
     "@teselagen/range-utils": "^0.3.20",

package/src/components/assembler/Assembler.cy.jsx

@@ -96,6 +96,7 @@ describe('<AssemblerComponent />', () => {
         <AssemblerComponent
           plasmids={mockPlasmids}
           categories={mockCategories}
+          assemblyEnzyme="assembly_enzyme"
         />
       </ConfigProvider>,
     );
@@ -209,9 +210,15 @@ describe('<AssemblerComponent />', () => {
       body: dummyResponse,
     }).as('fetchSourceSuccess');
     // Mock assembly request
-    cy.intercept('POST', 'http://localhost:8000/restriction_and_ligation*', {
-      statusCode: 200,
-      body: dummyResponse,
+    cy.intercept('POST', 'http://localhost:8000/restriction_and_ligation*', (req) => {
+      // Check that the value of the enzyme was set in the request body
+      expect(req.body).to.have.property('source');
+      expect(req.body.source).to.have.property('restriction_enzymes');
+      expect(req.body.source.restriction_enzymes).to.include('assembly_enzyme');
+      req.reply({
+        statusCode: 200,
+        body: dummyResponse,
+      });
     }).as('assemblySuccess');
 
     // Click submit button

package/src/components/assembler/Assembler.jsx

@@ -122,7 +122,7 @@ function AssemblerBox({ item, index, setCategory, setId, categories, plasmids, a
   )
 }
 
-export function AssemblerComponent({ plasmids, categories }) {
+export function AssemblerComponent({ plasmids, categories, assemblyEnzyme }) {
 
   const [requestedAssemblies, setRequestedAssemblies] = React.useState([])
   const [errorMessage, setErrorMessage] = React.useState('')
@@ -146,7 +146,7 @@ export function AssemblerComponent({ plasmids, categories }) {
       const resp = await requestSources(selectedPlasmids)
       errorMessage = 'Error assembling sequences'
       setLoadingMessage('Assembling...')
-      const assemblies = await requestAssemblies(resp)
+      const assemblies = await requestAssemblies(resp, assemblyEnzyme)
       setRequestedAssemblies(assemblies)
     } catch (e) {
       if (e.assembly) {
@@ -292,7 +292,7 @@ function Assembler() {
         {syntax && <UploadPlasmidsButton addPlasmids={addPlasmids} syntax={syntax} />}
         {syntax && <Button color="error" onClick={clearPlasmids}>Remove uploaded plasmids</Button>}
       </ButtonGroup>
-      {syntax && <AssemblerComponent plasmids={plasmids} syntax={syntax} categories={categories} />}
+      {syntax && <AssemblerComponent plasmids={plasmids} syntax={syntax} categories={categories} assemblyEnzyme={syntax.assemblyEnzyme} />}
     </>
   )
 }

package/src/version.js

@@ -1,2 +1,2 @@
 // Version placeholder - replaced at publish time via prepack script
-export const version = "1.4.1";
+export const version = "1.4.2";