@opencloning/store 1.7.3 → 1.9.0

package/CHANGELOG.md

@@ -1,5 +1,31 @@
 # @opencloning/store
 
+## 1.9.0
+
+## 1.8.2
+
+## 1.8.1
+
+## 1.8.0
+
+### Patch Changes
+
+- [#694](https://github.com/OpenCloning/OpenCloning_frontend/pull/694) [`2ff9010`](https://github.com/OpenCloning/OpenCloning_frontend/commit/2ff90103c1d9e8e984533e51ecf4dc7978756a57) Thanks [@manulera](https://github.com/manulera)! - Update how store is setup, using legacy_createStore.
+
+## 1.7.8
+
+## 1.7.7
+
+## 1.7.6
+
+## 1.7.5
+
+### Patch Changes
+
+- [#684](https://github.com/manulera/OpenCloning_frontend/pull/684) [`034c738`](https://github.com/manulera/OpenCloning_frontend/commit/034c73840dc183b6b3584365c1db899d2f0c548b) Thanks [@manulera](https://github.com/manulera)! - Allow recombinase genome setting
+
+## 1.7.4
+
 ## 1.7.3
 
 ## 1.7.2

package/package.json

@@ -1,7 +1,7 @@
 {
   "license": "MIT",
   "name": "@opencloning/store",
-  "version": "1.7.3",
+  "version": "1.9.0",
   "type": "module",
   "main": "./src/index.js",
   "exports": {
@@ -11,12 +11,12 @@
   },
   "repository": {
     "type": "git",
-    "url": "https://github.com/manulera/OpenCloning_frontend.git",
+    "url": "https://github.com/OpenCloning/OpenCloning_frontend.git",
     "directory": "packages/store"
   },
   "dependencies": {
     "@reduxjs/toolkit": "^1.9.7",
-    "@teselagen/bio-parsers": "^0.4.34",
+    "@teselagen/bio-parsers": "^0.4.38",
     "@teselagen/range-utils": "^0.3.20",
     "redux": "^4.2.1",
     "redux-form": "^8.3.10",

package/src/cloning.js

@@ -45,6 +45,10 @@ const initialState = {
 
 const reducer = {
 
+  reset(state) {
+    return { ...initialState };
+  },
+
   setCurrentTab(state, action) {
     state.currentTab = action.payload;
   },

package/src/cloning_utils.js

@@ -40,6 +40,13 @@ export function getInputSequencesFromSourceId(state, sourceId) {
   return thisSource.input.map(({sequence}) => state.cloning.sequences.find((e) => e.id === sequence)).filter((e) => e !== undefined);
 }
 
+/** True if any assembly input is linear (not circular) according to teselaJsonCache.*/
+export function anyAssemblyInputIsLinear(source, teselaJsonCache) {
+  const sequenceIds = source.input.map(({ sequence }) => sequence);
+  // We test whether teselaJsonCache[id], because primers are also listed as inputs
+  return sequenceIds.some((id) => teselaJsonCache[id] && (teselaJsonCache[id].circular !== true));
+}
+
 export function isSourceATemplate({ sources, sequences }, sourceId) {
   // Get the output sequence
   const source = sources.find((s) => s.id === sourceId);

package/src/index.js

@@ -1,5 +1,5 @@
 // optionally connect to the redux store
-import { createStore, combineReducers, applyMiddleware, compose } from 'redux';
+import { legacy_createStore as createStore, combineReducers, applyMiddleware, compose } from 'redux';
 import { tg_modalState } from '@teselagen/ui';
 import {
   vectorEditorReducer as VectorEditor,
@@ -18,17 +18,23 @@ const composeEnhancer = (window.__REDUX_DEVTOOLS_EXTENSION_COMPOSE__
     }))
   || compose;
 
+const reducerMap = {
+  form,
+  tg_modalState,
+  VectorEditor: VectorEditor(),
+  cloning: cloningReducer,
+};
+
 const store = createStore(
-  combineReducers({
-    form,
-    tg_modalState,
-    VectorEditor: VectorEditor(),
-    cloning: cloningReducer,
-  }),
+  combineReducers(reducerMap),
   undefined,
   composeEnhancer(
     applyMiddleware(thunk, vectorEditorMiddleware), // your store should be redux-thunk connected for the VectorEditor component to work
   ),
 );
 
+export function extendStore(extraReducers) {
+  store.replaceReducer(combineReducers({ ...reducerMap, ...extraReducers }));
+}
+
 export default store;