@openbraininstitute/morphoviewer 0.32.1 → 0.32.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.d.ts +2 -1
- package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.d.ts.map +1 -1
- package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.js +6 -3
- package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/tree.js +4 -4
- package/dist/package.json +1 -1
- package/package.json +1 -1
package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.d.ts
CHANGED
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@@ -5,11 +5,12 @@ export interface CellSegment extends PickableSegment {
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index: number;
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sonataSectionId?: number;
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sectionType: MorphoViewerTreeItemType;
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+
isSomaStub: boolean;
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}
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export declare class CellSectionIndex implements SectionSegmentIndex {
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private readonly segments;
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private readonly bySection;
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add(item: MorphoViewerTreeItem, start: ArrayNumber3, end: ArrayNumber3): CellSegment;
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add(item: MorphoViewerTreeItem, start: ArrayNumber3, end: ArrayNumber3, isSomaStub?: boolean): CellSegment;
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get length(): number;
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get(index: number): CellSegment | undefined;
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getSegmentsOfSection(sectionName: string): CellSegment[];
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"section-index.d.ts","sourceRoot":"","sources":["../../../../../../src/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AACnD,OAAO,KAAK,EACV,oBAAoB,EACpB,wBAAwB,EACzB,MAAM,kCAAkC,CAAC;AAC1C,OAAO,KAAK,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,sBAAsB,CAAC;AAGjF,MAAM,WAAW,WAAY,SAAQ,eAAe;IAElD,KAAK,EAAE,MAAM,CAAC;IAEd,eAAe,CAAC,EAAE,MAAM,CAAC;IAEzB,WAAW,EAAE,wBAAwB,CAAC;
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1
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+
{"version":3,"file":"section-index.d.ts","sourceRoot":"","sources":["../../../../../../src/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AACnD,OAAO,KAAK,EACV,oBAAoB,EACpB,wBAAwB,EACzB,MAAM,kCAAkC,CAAC;AAC1C,OAAO,KAAK,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,sBAAsB,CAAC;AAGjF,MAAM,WAAW,WAAY,SAAQ,eAAe;IAElD,KAAK,EAAE,MAAM,CAAC;IAEd,eAAe,CAAC,EAAE,MAAM,CAAC;IAEzB,WAAW,EAAE,wBAAwB,CAAC;IAEtC,UAAU,EAAE,OAAO,CAAC;CACrB;AASD,qBAAa,gBAAiB,YAAW,mBAAmB;IAC1D,OAAO,CAAC,QAAQ,CAAC,QAAQ,CAAqB;IAC9C,OAAO,CAAC,QAAQ,CAAC,SAAS,CAAoC;IAQ9D,GAAG,CACD,IAAI,EAAE,oBAAoB,EAC1B,KAAK,EAAE,YAAY,EACnB,GAAG,EAAE,YAAY,EACjB,UAAU,UAAQ,GACjB,WAAW;IAwBd,IAAI,MAAM,IAAI,MAAM,CAEnB;IAGD,GAAG,CAAC,KAAK,EAAE,MAAM,GAAG,WAAW,GAAG,SAAS;IAK3C,oBAAoB,CAAC,WAAW,EAAE,MAAM,GAAG,WAAW,EAAE;IAWxD,cAAc,CAAC,WAAW,EAAE,MAAM,GAAG,wBAAwB,GAAG,SAAS;IASzE,gBAAgB,CAAC,WAAW,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,YAAY,GAAG,IAAI;CAkB3E"}
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package/dist/components/morpho-viewer-small-circuit/painter/painter-cell/factory/section-index.js
CHANGED
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@@ -3,7 +3,7 @@ export class CellSectionIndex {
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this.segments = [];
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this.bySection = new Map();
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}
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-
add(item, start, end) {
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add(item, start, end, isSomaStub = false) {
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var _a;
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const sectionName = item.sectionId;
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const siblings = (_a = this.bySection.get(sectionName)) !== null && _a !== void 0 ? _a : [];
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@@ -17,6 +17,7 @@ export class CellSectionIndex {
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end,
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sonataSectionId: item.sonataSectionId,
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sectionType: item.type,
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isSomaStub,
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};
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this.segments.push(segment);
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siblings.push(segment);
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@@ -31,7 +32,9 @@ export class CellSectionIndex {
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}
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getSegmentsOfSection(sectionName) {
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var _a;
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-
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const all = (_a = this.bySection.get(sectionName)) !== null && _a !== void 0 ? _a : [];
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const measured = all.filter((segment) => !segment.isSomaStub);
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return measured.length > 0 ? measured : all;
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}
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getSectionType(sectionName) {
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var _a, _b;
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@@ -66,4 +69,4 @@ function lerp(from, to, alpha) {
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function distance([x1, y1, z1], [x2, y2, z2]) {
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return Math.sqrt(Math.pow((x1 - x2), 2) + Math.pow((y1 - y2), 2) + Math.pow((z1 - z2), 2));
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}
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-
//# sourceMappingURL=data:application/json;base64,
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+
//# sourceMappingURL=data:application/json;base64,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@@ -14,7 +14,9 @@ export function createCellFromTree(context, material, tree, forSelection, somaAs
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const somaSphere = fitSomaSphere(pending);
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let somaDrawn = false;
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for (const segment of pending) {
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const
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const stubOffSoma = ((_a = segment.parent) === null || _a === void 0 ? void 0 : _a.type) === MorphoViewerTreeItemType.Soma &&
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segment.item.type !== MorphoViewerTreeItemType.Soma;
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const recorded = sections.add(segment.item, segment.start, segment.end, stubOffSoma);
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const uv0 = makeUV(segment.parentType, recorded.index, pending.length);
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const uv1 = makeUV(segment.item.type, recorded.index, pending.length);
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const target = segment.isSoma ? segmentsSoma : segmentsNeurites;
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@@ -24,8 +26,6 @@ export function createCellFromTree(context, material, tree, forSelection, somaAs
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target.add([...somaSphere.center, radius], [...somaSphere.center, radius], uv1, uv1);
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continue;
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}
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const stubOffSoma = ((_a = segment.parent) === null || _a === void 0 ? void 0 : _a.type) === MorphoViewerTreeItemType.Soma &&
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segment.item.type !== MorphoViewerTreeItemType.Soma;
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target.add([
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...(stubOffSoma && somaAsSphere ? somaSphere.center : segment.start),
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stubOffSoma ? Math.min(segment.radiusStart, segment.radiusEnd) : segment.radiusStart,
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@@ -117,4 +117,4 @@ function computeCoordU(type) {
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];
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return (types.indexOf(type) + 0.5) / types.length;
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}
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//# sourceMappingURL=data:application/json;base64,
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+
//# 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package/dist/package.json
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