@openbiox/bizard-mcp 0.0.0-stage → 0.1.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (42) hide show
  1. package/README.md +91 -2
  2. package/dist/adapt-tools.d.ts +3 -0
  3. package/dist/adapt-tools.js +45 -0
  4. package/dist/adapt.d.ts +12 -0
  5. package/dist/adapt.js +77 -0
  6. package/dist/bundle.d.ts +4 -0
  7. package/dist/bundle.js +35 -0
  8. package/dist/citation.d.ts +6 -0
  9. package/dist/citation.js +34 -0
  10. package/dist/contribute-tools.d.ts +3 -0
  11. package/dist/contribute-tools.js +41 -0
  12. package/dist/contribute.d.ts +44 -0
  13. package/dist/contribute.js +136 -0
  14. package/dist/entry.d.ts +17 -0
  15. package/dist/entry.js +48 -0
  16. package/dist/http.d.ts +9 -0
  17. package/dist/http.js +109 -0
  18. package/dist/index.d.ts +2 -0
  19. package/dist/index.js +3 -0
  20. package/dist/prompts.d.ts +2 -0
  21. package/dist/prompts.js +74 -0
  22. package/dist/resources.d.ts +3 -0
  23. package/dist/resources.js +36 -0
  24. package/dist/results.d.ts +13 -0
  25. package/dist/results.js +6 -0
  26. package/dist/search.d.ts +21 -0
  27. package/dist/search.js +64 -0
  28. package/dist/server.d.ts +18 -0
  29. package/dist/server.js +115 -0
  30. package/dist/snapshot/bundle.json +170377 -0
  31. package/dist/snapshot/llms.txt +892 -0
  32. package/dist/tutorial-tools.d.ts +10 -0
  33. package/dist/tutorial-tools.js +38 -0
  34. package/dist/tutorial.d.ts +31 -0
  35. package/dist/tutorial.js +53 -0
  36. package/dist/types.d.ts +49 -0
  37. package/dist/types.js +1 -0
  38. package/dist/update-check.d.ts +24 -0
  39. package/dist/update-check.js +49 -0
  40. package/dist/usage.d.ts +10 -0
  41. package/dist/usage.js +44 -0
  42. package/package.json +37 -4
package/dist/snapshot/llms.txt ADDED
@@ -0,0 +1,892 @@
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+ # Bizard
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+
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+ > An open atlas of biomedical data visualization tutorials (R/Python/Julia).
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+ > License: CC-BY-NC-4.0. Paper: https://arxiv.org/abs/2503.06845
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+
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+ ## Animation (动画)
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+ - [Scattered Bubble Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#taking-the-gapminder-dataset-as-an-example)
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+ - [Scattered Bubble Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#grouped-scatter-bubble-animation)
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+ - [Bar Chart Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#interval-transition-bar-chart)
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+ - [Bar Chart Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#interval-transition-bar-chart)
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+ - [Line Chart Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#dynamic-line-chart)
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+ - [Line Chart Animation](https://openbiox.github.io/Bizard/Animation/Animation.html#dynamic-line-chart)
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+ - [Interactivity Bubble Chart](https://openbiox.github.io/Bizard/Animation/Interactivity.html#bubble-chart-using-plotly)
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+ - [Interactivity Heatmap](https://openbiox.github.io/Bizard/Animation/Interactivity.html#heatmap-using-plotly-and-d3heatmap)
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+ - [Interactivity Heatmap](https://openbiox.github.io/Bizard/Animation/Interactivity.html#d3heatmap)
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+ - [Interactivity Streamgraph](https://openbiox.github.io/Bizard/Animation/Interactivity.html#streamline-diagram-using-streamgraph)
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+ - [Interactivity Chord Diagram](https://openbiox.github.io/Bizard/Animation/Interactivity.html#chord-diagram-using-the-chorddiag-package)
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+ - [Interactivity Time Series Plot](https://openbiox.github.io/Bizard/Animation/Interactivity.html#time-series-plots-using-the-dygraphs-package)
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+ - [Interactivity Plot Using ggiraph Package](https://openbiox.github.io/Bizard/Animation/Interactivity.html#basic-usage)
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+ - [Interactivity Plot Using ggiraph Package](https://openbiox.github.io/Bizard/Animation/Interactivity.html#merge-charts)
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+ - [Interactivity Plot Using ggiraph Package](https://openbiox.github.io/Bizard/Animation/Interactivity.html#customize-interactive-charts-using-css)
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+ - [Interactivity Plot Using ggiraph Package](https://openbiox.github.io/Bizard/Animation/Interactivity.html#add-css)
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+ - [Interactivity Plot Using ggiraph Package](https://openbiox.github.io/Bizard/Animation/Interactivity.html#add-css)
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+
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+ ## BASICS
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+ - [Area Plot](https://openbiox.github.io/Bizard/Hiplot/001-area.html)
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+ - [Barcode Plot](https://openbiox.github.io/Bizard/Hiplot/002-barcode-plot.html)
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+ - [3D Barplot](https://openbiox.github.io/Bizard/Hiplot/003-barplot-3d.html)
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+ - [Barplot (errorbar)](https://openbiox.github.io/Bizard/Hiplot/005-barplot-errorbar.html)
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+ - [Barplot (errorbar2)](https://openbiox.github.io/Bizard/Hiplot/006-barplot-errorbar2.html)
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+ - [Multiple Line](https://openbiox.github.io/Bizard/Hiplot/009-barplot-line-multiple.html#multiple-line)
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+ - [Multiple Barplot](https://openbiox.github.io/Bizard/Hiplot/009-barplot-line-multiple.html#multiple-barplot)
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+ - [Beeswarm](https://openbiox.github.io/Bizard/Hiplot/012-beeswarm.html)
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+ - [Bumpchart](https://openbiox.github.io/Bizard/Hiplot/017-bumpchart.html)
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+ - [Chi-square-fisher Test](https://openbiox.github.io/Bizard/Hiplot/019-chi-square-fisher.html)
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+ - [Circle Packing](https://openbiox.github.io/Bizard/Hiplot/021-circle-packing.html)
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+ - [Circular Barplot](https://openbiox.github.io/Bizard/Hiplot/023-circular-barplot.html)
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+ - [Circular Pie Chart](https://openbiox.github.io/Bizard/Hiplot/024-circular-pie-chart.html)
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+ - [Connected Scatterplot](https://openbiox.github.io/Bizard/Hiplot/026-connected-scatterplot.html)
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+ - [Contour (Matrix)](https://openbiox.github.io/Bizard/Hiplot/027-contour-matrix.html)
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+ - [Contour (XY)](https://openbiox.github.io/Bizard/Hiplot/028-contour-xy.html)
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+ - [Simplified Correlation Heatmap](https://openbiox.github.io/Bizard/Hiplot/029-cor-heatmap-simple.html)
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+ - [Custom Heatmap](https://openbiox.github.io/Bizard/Hiplot/034-custom-heat-map.html)
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+ - [Custom Icon Scatter](https://openbiox.github.io/Bizard/Hiplot/035-custom-icon-scatter.html)
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+ - [D3 Wordcloud](https://openbiox.github.io/Bizard/Hiplot/036-d3-wordcloud.html)
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+ - [Mirror Density](https://openbiox.github.io/Bizard/Hiplot/038-density-hist-mirror.html#mirror-density)
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+ - [Mirror Histogram](https://openbiox.github.io/Bizard/Hiplot/038-density-hist-mirror.html#mirror-histogram)
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+ - [Density Plot](https://openbiox.github.io/Bizard/Hiplot/039-density-histogram.html#density-plot)
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+ - [Histogram Plot](https://openbiox.github.io/Bizard/Hiplot/039-density-histogram.html#histogram-plot)
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+ - [Density](https://openbiox.github.io/Bizard/Hiplot/040-density.html)
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+ - [Deviation Plot](https://openbiox.github.io/Bizard/Hiplot/041-deviation-plot.html)
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+ - [Diverging Scale Barplot](https://openbiox.github.io/Bizard/Hiplot/043-diverging-scale.html#barplot)
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+ - [Diverging Scale Lollipop Plot](https://openbiox.github.io/Bizard/Hiplot/043-diverging-scale.html#lollipop-plot)
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+ - [Donut](https://openbiox.github.io/Bizard/Hiplot/045-donut.html)
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+ - [Dual Y Axis Chart](https://openbiox.github.io/Bizard/Hiplot/047-dual-y-axis.html)
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+ - [Dumbbell Chart](https://openbiox.github.io/Bizard/Hiplot/048-dumbbell.html)
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+ - [Easy SOM](https://openbiox.github.io/Bizard/Hiplot/050-easy-som.html)
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+ - [Eulerr Plot](https://openbiox.github.io/Bizard/Hiplot/051-eulerr.html)
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+ - [Extended Scatter](https://openbiox.github.io/Bizard/Hiplot/052-extended-scatter.html)
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+ - [Fan Plot](https://openbiox.github.io/Bizard/Hiplot/054-fan.html)
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+ - [Flower plot](https://openbiox.github.io/Bizard/Hiplot/056-flowerplot.html)
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+ - [Barstats](https://openbiox.github.io/Bizard/Hiplot/063-ggbarstats.html)
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+ - [Betweenstats](https://openbiox.github.io/Bizard/Hiplot/064-ggbetweenstats.html)
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+ - [Directed Acyclic Graphs](https://openbiox.github.io/Bizard/Hiplot/065-ggdag.html)
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+ - [Dist Plot](https://openbiox.github.io/Bizard/Hiplot/066-ggdist.html)
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+ - [Histostats](https://openbiox.github.io/Bizard/Hiplot/067-gghistostats.html)
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+ - [GGPIE](https://openbiox.github.io/Bizard/Hiplot/068-ggpie.html)
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+ - [Piestats Group](https://openbiox.github.io/Bizard/Hiplot/069-ggpiestats-group.html)
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+ - [Piestats](https://openbiox.github.io/Bizard/Hiplot/071-ggpiestats.html)
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+ - [GGPubr Boxplot](https://openbiox.github.io/Bizard/Hiplot/072-ggpubr-boxplot.html)
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+ - [Scatterstats](https://openbiox.github.io/Bizard/Hiplot/073-ggscatterstats.html)
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+ - [Complex-Violin](https://openbiox.github.io/Bizard/Hiplot/075-ggwithinstats.html)
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+ - [ggwordcloud](https://openbiox.github.io/Bizard/Hiplot/076-ggwordcloud.html)
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+ - [Group Rank Dotplot](https://openbiox.github.io/Bizard/Hiplot/080-grdotplot.html)
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+ - [Group Bubble](https://openbiox.github.io/Bizard/Hiplot/081-group-bubble.html)
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+ - [Group-comparison Heatmap](https://openbiox.github.io/Bizard/Hiplot/082-group-comparison.html)
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+ - [Group Dumbbell](https://openbiox.github.io/Bizard/Hiplot/083-group-dumbbell.html)
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+ - [Group Line](https://openbiox.github.io/Bizard/Hiplot/084-group-line.html)
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+ - [Half Violin](https://openbiox.github.io/Bizard/Hiplot/085-half-violin.html)
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+ - [Interval Area Chart](https://openbiox.github.io/Bizard/Hiplot/089-interval-area-chart.html)
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+ - [Interval Bar Chart](https://openbiox.github.io/Bizard/Hiplot/090-interval-bar-chart.html)
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+ - [Likert Plot](https://openbiox.github.io/Bizard/Hiplot/091-likert.html)
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+ - [Line (Color Dot)](https://openbiox.github.io/Bizard/Hiplot/092-line-color-dot.html)
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+ - [Line (errorbar)](https://openbiox.github.io/Bizard/Hiplot/093-line-errorbar.html)
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+ - [Line](https://openbiox.github.io/Bizard/Hiplot/095-line.html)
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+ - [Moon charts](https://openbiox.github.io/Bizard/Hiplot/122-moon-charts.html)
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+ - [Multiple Histograms](https://openbiox.github.io/Bizard/Hiplot/125-multiple-histograms.html)
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+ - [Network (igraph)](https://openbiox.github.io/Bizard/Hiplot/127-network-igraph.html)
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+ - [Neural Network](https://openbiox.github.io/Bizard/Hiplot/129-neural-network.html)
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+ - [Parallel Coordinate](https://openbiox.github.io/Bizard/Hiplot/132-parallel-coordinate.html)
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+ - [Pareto Chart](https://openbiox.github.io/Bizard/Hiplot/133-pareto-chart.html)
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+ - [Parliament](https://openbiox.github.io/Bizard/Hiplot/134-parliament.html)
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+ - [Perspective](https://openbiox.github.io/Bizard/Hiplot/137-perspective.html)
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+ - [3D Pie](https://openbiox.github.io/Bizard/Hiplot/138-pie-3d.html)
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+ - [Pie Group](https://openbiox.github.io/Bizard/Hiplot/139-pie-group.html)
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+ - [Pie Matrix](https://openbiox.github.io/Bizard/Hiplot/140-pie-matrix.html)
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+ - [Pie](https://openbiox.github.io/Bizard/Hiplot/141-pie.html)
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+ - [Point (SD)](https://openbiox.github.io/Bizard/Hiplot/142-point-sd.html)
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+ - [Pyramid Chart](https://openbiox.github.io/Bizard/Hiplot/144-pyramid-chart.html)
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+ - [Pyramid Chart 2](https://openbiox.github.io/Bizard/Hiplot/145-pyramid-chart2.html)
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+ - [Pyramid Stack](https://openbiox.github.io/Bizard/Hiplot/146-pyramid-stack.html)
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+ - [Pyramid Stack2](https://openbiox.github.io/Bizard/Hiplot/147-pyramid-stack2.html)
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+ - [R Script Flow](https://openbiox.github.io/Bizard/Hiplot/149-r-code-flow.html)
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+ - [Radar](https://openbiox.github.io/Bizard/Hiplot/150-radar.html)
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+ - [Ribbon](https://openbiox.github.io/Bizard/Hiplot/153-ribbon.html)
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+ - [Ridge](https://openbiox.github.io/Bizard/Hiplot/154-ridge.html)
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+ - [Sankey](https://openbiox.github.io/Bizard/Hiplot/158-sankey.html)
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+ - [3D-Scatter](https://openbiox.github.io/Bizard/Hiplot/159-scatter-3d.html)
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+ - [Gradient Scatter](https://openbiox.github.io/Bizard/Hiplot/160-scatter-gradient.html)
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+ - [Scatter](https://openbiox.github.io/Bizard/Hiplot/161-scatter.html)
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+ - [Scatter2](https://openbiox.github.io/Bizard/Hiplot/162-scatter2.html)
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+ - [Scatterpie](https://openbiox.github.io/Bizard/Hiplot/163-scatterpie.html)
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+ - [Simple Funnel Diagram](https://openbiox.github.io/Bizard/Hiplot/164-simple-funnel-diagram.html)
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+ - [Slopegraph](https://openbiox.github.io/Bizard/Hiplot/165-slopegraph.html)
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+ - [Percentsge Stacked Bar Chart](https://openbiox.github.io/Bizard/Hiplot/167-stacked-percentage-bar-chart.html)
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+ - [Streamgraph](https://openbiox.github.io/Bizard/Hiplot/168-streamgraph.html)
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+ - [Treemap](https://openbiox.github.io/Bizard/Hiplot/173-treemap.html)
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+ - [Tricolor Histogram](https://openbiox.github.io/Bizard/Hiplot/174-tricolor-histogram.html)
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+ - [Upset Plot](https://openbiox.github.io/Bizard/Hiplot/177-upset-plot.html)
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+ - [Venn](https://openbiox.github.io/Bizard/Hiplot/178-venn.html)
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+ - [Venn2](https://openbiox.github.io/Bizard/Hiplot/179-venn2.html)
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+ - [Violin Group](https://openbiox.github.io/Bizard/Hiplot/180-violin-group.html)
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+ - [Violin](https://openbiox.github.io/Bizard/Hiplot/181-violin.html)
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+ - [Visdat](https://openbiox.github.io/Bizard/Hiplot/182-visdat.html)
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+ - [Waffle Plot](https://openbiox.github.io/Bizard/Hiplot/184-waffle.html)
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+ - [Waterfalls Plot2](https://openbiox.github.io/Bizard/Hiplot/185-waterfalls-plot.html)
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+ - [Waterfalls](https://openbiox.github.io/Bizard/Hiplot/186-waterfalls.html)
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+ - [PCA](https://openbiox.github.io/Bizard/Hiplot/187-pca.html)
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+
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+ ## CLINICS
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+ - [Barplot](https://openbiox.github.io/Bizard/Hiplot/010-barplot.html)
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+ - [Beanplot](https://openbiox.github.io/Bizard/Hiplot/011-beanplot.html)
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+ - [Bivariate Chart](https://openbiox.github.io/Bizard/Hiplot/014-bivariate.html)
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+ - [Boxplot](https://openbiox.github.io/Bizard/Hiplot/015-boxplot.html)
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+ - [Calibration Curve](https://openbiox.github.io/Bizard/Hiplot/018-calibration-curve.html)
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+ - [Complex Heatmap](https://openbiox.github.io/Bizard/Hiplot/025-complex-heatmap.html)
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+ - [Easy Pairs](https://openbiox.github.io/Bizard/Hiplot/049-easy-pairs.html)
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+ - [Cox Models Forest](https://openbiox.github.io/Bizard/Hiplot/053-ezcox.html)
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+ - [Gantt](https://openbiox.github.io/Bizard/Hiplot/059-gantt.html)
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+ - [Histogram](https://openbiox.github.io/Bizard/Hiplot/088-histogram.html)
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+ - [Line Regression](https://openbiox.github.io/Bizard/Hiplot/094-line-regression.html)
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+ - [Meta-analysis of Binary Data](https://openbiox.github.io/Bizard/Hiplot/119-meta-bin.html)
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+ - [Meta-analysis of Continuous Data](https://openbiox.github.io/Bizard/Hiplot/120-meta-cont.html)
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+ - [Meta-Subgroup Analysis](https://openbiox.github.io/Bizard/Hiplot/121-metawho.html)
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+ - [Mosaic Ratio Plot](https://openbiox.github.io/Bizard/Hiplot/123-mosaic.html)
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+ - [Nomogram (Logistic)](https://openbiox.github.io/Bizard/Hiplot/130-nomogram-logistic.html)
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+ - [Nomogram](https://openbiox.github.io/Bizard/Hiplot/131-nomogram.html)
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+ - [RCS-COX](https://openbiox.github.io/Bizard/Hiplot/151-rcs-cox.html)
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+ - [RCS-LRM](https://openbiox.github.io/Bizard/Hiplot/152-rcs-lrm.html)
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+ - [Risk Factor Analysis](https://openbiox.github.io/Bizard/Hiplot/155-risk-plot.html)
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+ - [ROC](https://openbiox.github.io/Bizard/Hiplot/156-roc.html)
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+ - [Survival Analysis](https://openbiox.github.io/Bizard/Hiplot/169-survival.html)
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+ - [Taylor Diagram](https://openbiox.github.io/Bizard/Hiplot/170-taylor-diagram.html)
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+ - [Time ROC](https://openbiox.github.io/Bizard/Hiplot/171-time-roc.html)
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+
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+ ## CellChatCirclePlot
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+ - [Overall Cell-Cell Communication Circle Plot](https://openbiox.github.io/Bizard/Omics/CellChatCirclePlot.html#fig-1-overall-circle)
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+ - [Per-Cell-Type Outgoing Communication Circle Plot](https://openbiox.github.io/Bizard/Omics/CellChatCirclePlot.html#fig-2-individual-circle)
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+ - [Cell-Cell Communication Chord Diagram](https://openbiox.github.io/Bizard/Omics/CellChatCirclePlot.html#fig-3-chord)
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+ - [Cell-Cell Communication Heatmap](https://openbiox.github.io/Bizard/Omics/CellChatCirclePlot.html#fig-4-heatmap)
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+
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+ ## ChromosomePlot
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-1BasicChromosomePlot)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-1HeatmapChromosomePlot)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-1LabelChromosomePlot)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-1Both)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#custom-heatmap-colors)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-6)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-7-1)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-7-2)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-8)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-9-1)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-9-2)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-9-3)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-9-4)
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+ - [Chromosome Plot](https://openbiox.github.io/Bizard/Omics/ChromosomePlot.html#fig-9-5)
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+
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+ ## CollinearityPlot
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+ - [Collinearity Plot](https://openbiox.github.io/Bizard/Omics/CollinearityPlot.html#basic-collinearity-plot)
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+ - [Collinearity Plot](https://openbiox.github.io/Bizard/Omics/CollinearityPlot.html#change-colors)
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+
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+ ## Composition (组成)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#grouped-bar-chart)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#stacked-bar-chart)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#percentage-stacked-bar-chart)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#custom-grouped-bar-chart)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#custom-grouped-bar-chart)
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+ - [Barplot Using iris Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#faceted-bar-chart)
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+ - [Barplot Using TCGA Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#grouped-bar-chart-1)
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+ - [Barplot Using TCGA Data](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#stacked-bar-chart-1)
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+ - [Barplot Using Base R](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#grouped-bar-chart-2)
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+ - [Barplot Using Base R](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#stacked-bar-chart-2)
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+ - [Barplot Using Base R](https://openbiox.github.io/Bizard/Composition/GroupedBarplot.html#percentage-stacked-bar-chart-1)
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+ - [Single Variable Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-Labelfill)
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+ - [Single Variable Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-Sizefill)
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+ - [Single Variable Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-HALLMARK)
197
+ - [Multivariate Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-datalabel)
198
+ - [Multivariate Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-datasize)
199
+ - [Multivariate Classification Treemap](https://openbiox.github.io/Bizard/Composition/Treemap.html#fig-KEGG)
200
+ - [Basic Donut Chart](https://openbiox.github.io/Bizard/Composition/Donut.html#fig-TCGAdata)
201
+ - [Basic Donut Chart](https://openbiox.github.io/Bizard/Composition/Donut.html#fig-Beautify)
202
+ - [Basic Donut Chart](https://openbiox.github.io/Bizard/Composition/Donut.html#fig-mtcarsdata)
203
+ - [Change Thickness for Donut Chart](https://openbiox.github.io/Bizard/Composition/Donut.html#fig-thickTCGA)
204
+ - [Change Thickness for Donut Chart](https://openbiox.github.io/Bizard/Composition/Donut.html#fig-thickmtcars)
205
+ - [Basic Bar Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#basic-pie-chart)
206
+ - [Basic Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#basic-pie-chart)
207
+ - [Simple Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#simple-pie-chart)
208
+ - [Custom Colors for Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#custom-colors)
209
+ - [Add Labels for Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#add-labels)
210
+ - [Add Percentage Labels for Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#add-percentage-labels)
211
+ - [Place the Label Outside the Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#place-the-label-outside-the-pie-chart)
212
+ - [Add Labels to the Lines Pointing to the Pie Chart](https://openbiox.github.io/Bizard/Composition/PieChart.html#add-labels-to-the-lines-pointing-to-the-pie-chart)
213
+ - [Basic Pie Chart](https://openbiox.github.io/Bizard/Composition/PartPieChart.html#fig-1.1BasicPlot)
214
+ - [Basic Pie Chart](https://openbiox.github.io/Bizard/Composition/PartPieChart.html#fig-1.2BasicPlot)
215
+ - [Advanced Pie Chart](https://openbiox.github.io/Bizard/Composition/PartPieChart.html#fig-2.13DPie)
216
+ - [Advanced Pie Chart](https://openbiox.github.io/Bizard/Composition/PartPieChart.html#fig-Fig2-2)
217
+ - [Dendrogram of Hierarchical Data](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#basic-plot)
218
+ - [Dendrogram of Hierarchical Data](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram)
219
+ - [Dendrogram of Hierarchical Data](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram)
220
+ - [Dendrogram of Hierarchical Data](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram)
221
+ - [Dendrogram of Hierarchical Data](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram)
222
+ - [Interactive Dendrogram](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#interactive-tree-diagram)
223
+ - [Clustering Dendrogram](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#basic-tree-diagram)
224
+ - [Clustering Dendrogram](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#zoom-group)
225
+ - [Clustering Dendrogram](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#colors-and-legends)
226
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#basic-tree-diagram-1)
227
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram-1)
228
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram-1)
229
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#custom-tree-diagram-1)
230
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#highlight-clusters)
231
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#highlight-clusters)
232
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#comparison-with-expected-clustering)
233
+ - [Dendrogram Using dendextend Package](https://openbiox.github.io/Bizard/Composition/Dendrogram.html#comparing-two-tree-diagrams)
234
+ - [Single-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#basic-circular-packing-chart)
235
+ - [Single-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#color-mapping-data-size)
236
+ - [Single-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#custom-background)
237
+ - [Interactive Single-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#interactive-single-level-circular-packing-chart)
238
+ - [Multi-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#multi-level-circular-packing-chart)
239
+ - [Interactive Multi-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#interactive-multi-level-circular-packing-chart)
240
+ - [Interactive Multi-level Circular Packing Chart](https://openbiox.github.io/Bizard/Composition/CircularPacking.html#interactive-multi-level-circular-packing-chart)
241
+ - [Basic Waffle Chart Using waffle Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#basic-code)
242
+ - [Basic Waffle Chart Using waffle Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#beautify-plot)
243
+ - [Basic Waffle Chart Using waffle Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#taking-the-mtcars-database-as-an-example)
244
+ - [Basic Waffle Chart Using ggplot2 Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#basic-code-1)
245
+ - [Basic Waffle Chart Using ggplot2 Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#beautify-plot-1)
246
+ - [Basic Waffle Chart Using ggplot2 Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#taking-the-mtcars-database-as-an-example-1)
247
+ - [Basic Waffle Chart Using ggplot2 Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#grouping)
248
+ - [Basic Waffle Chart Using ggplot2 Package](https://openbiox.github.io/Bizard/Composition/Waffle.html#grouping)
249
+
250
+ ## Correlation (相关)
251
+ - [Basic Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-BasicPlot)
252
+ - [Set Point Style for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-PointStyle)
253
+ - [Multi-class Data Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-Multi-classDataPlot)
254
+ - [Multi-class Data Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-MapFeatures)
255
+ - [Multi-class Data Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-ChangeLegendPosition)
256
+ - [Add Point Labels for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-Point_Labels1)
257
+ - [Add Point Labels for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-Point_Labels2)
258
+ - [Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionCurve)
259
+ - [Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionEquation)
260
+ - [Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionEquation_Label)
261
+ - [Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionEquations)
262
+ - [Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-CorrelationCoefficient)
263
+ - [Add Labels to Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionCurve_Label)
264
+ - [Add Labels to Regression Curve for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-RegressionCurve_Labels)
265
+ - [Add Marginal Rug Plots for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-MarginalRug_Plot)
266
+ - [Add Marginal Distributions for Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-MarginalDistributions)
267
+ - [3D Interactive Scatter Plot](https://openbiox.github.io/Bizard/Correlation/Scatter.html#fig-3D_Scatter)
268
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BasicHeatBasicR)
269
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-StandardizationBasicR)
270
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ClusteringandReorderingBasicR)
271
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorPalettesBasicR-1)
272
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-CustomizingLayoutBasicR-2)
273
+ - [Basic Heatmap](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorAnnotationsBasicR)
274
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BasicHeatggplot2)
275
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorPalettesggplot2)
276
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-Wide-Formatggplot2)
277
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#interactive-heatmaps)
278
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-d3heatmapggplot2)
279
+ - [Heatmap Using ggplot2 Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-heatmaplyggplot2)
280
+ - [Heatmap Using lattice Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BasicHeatlattice)
281
+ - [Heatmap Using lattice Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-Wide-FormatMatrixInputlattice)
282
+ - [Heatmap Using lattice Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-FlippingAxeslattice)
283
+ - [Heatmap Using lattice Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorPaletteslattice-1)
284
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BasicHeatPheatmap)
285
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-AdjustingDendrograms)
286
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-AngleAdjustment)
287
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-AddingValuesorMarkers)
288
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-RawDataforAnnotation)
289
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-UsingNormalizedData)
290
+ - [Heatmap Using pheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorPalettesPheatmap-1)
291
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BasicHeatcomplexheatmap)
292
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorPalettescomplexheatmap)
293
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-colorRamp2complexheatmap)
294
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-ColorVectorcomplexheatmap)
295
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-nacolcomplexheatmap)
296
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-DifferentLinearInterpolationcomplexheatmap)
297
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-BordersandGridlinescomplexheatmap)
298
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-Clusteringcomplexheatmap)
299
+ - [Heatmap Using complexheatmap Package](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-MultipleHeatmapscomplexheatmap)
300
+ - [Basic ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-1.1BasicComplexheatmap)
301
+ - [Basic ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-1.2BasicComplexheatmap)
302
+ - [Customizing ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-2.1Custom)
303
+ - [Customizing ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-2.2Custom)
304
+ - [Customizing ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-2.3Custom)
305
+ - [Customizing ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-2.4Custom)
306
+ - [Clustering for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-3.1Cluster)
307
+ - [Clustering for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-3.2Cluster)
308
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.1Split)
309
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.2Split)
310
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.3Split)
311
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.4Split)
312
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.5Split)
313
+ - [Segmentation for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-4.6Split)
314
+ - [Add Data Labels for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-5.1AddLabel)
315
+ - [Add Data Labels for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-5.2AddLabel)
316
+ - [Add Data Labels for ComplexHeatmap](https://openbiox.github.io/Bizard/Correlation/ComplexHeatmap.html#fig-ComplexHeatmapFig5-3)
317
+ - [Correlogram Using GGally Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#drawing-of-basic-correlation-diagram)
318
+ - [Correlogram Using GGally Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#introducing-ggplot2-codes-to-color-each-category)
319
+ - [Correlogram Using GGally Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#customizing-the-plotting-type)
320
+ - [Correlogram Using GGally Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#customizing-the-plotting-type)
321
+ - [Correlogram Using GGally Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#correlation-visualization)
322
+ - [Correlogram Using corrplot Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#basic-plotting)
323
+ - [Correlogram Using corrplot Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#parameter-customization)
324
+ - [Correlogram Using corrplot Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#adding-significance-labels)
325
+ - [Correlogram Using ggcorrplot Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#plotting-with-ggcorrplot)
326
+ - [Correlogram Using ggcorrplot Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#plotting-with-ggcorrplot)
327
+ - [Correlogram Using corrgram Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#corrgram-package)
328
+ - [Correlogram Using corrgram Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#corrgram-package)
329
+ - [Correlogram Using corrgram Package](https://openbiox.github.io/Bizard/Correlation/Correlogram.html#corrgram-package)
330
+ - [Basic Bubble Plot](https://openbiox.github.io/Bizard/Correlation/Bubble.html#fig-BasicPlot)
331
+ - [Change Color for Bubble Plot](https://openbiox.github.io/Bizard/Correlation/Bubble.html#fig-ChangeColor)
332
+ - [Change the Range of Bubble Size](https://openbiox.github.io/Bizard/Correlation/Bubble.html#fig-ChangeSize)
333
+ - [Refined Bubble Plot](https://openbiox.github.io/Bizard/Correlation/Bubble.html#fig-RefinedFig)
334
+ - [Basic Connected Scatter Plot](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-BasicHist)
335
+ - [Set Line Styles for Connected Scatter Plot](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-LineStyle)
336
+ - [Multiclass Data for Connected Scatter Plot](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-Multi-classData_plot)
337
+ - [Genetic Data for Connected Scatter Plot](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-GeneticData_plot)
338
+ - [Do not Connect Points in Chronological Order](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-ComparisonDiagram)
339
+ - [Connect Points in Chronological Order](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-ChronologicalOrder_plot)
340
+ - [Draw Arrows for Connected Scatter Plot](https://openbiox.github.io/Bizard/Correlation/ConnectedScatter.html#fig-DrawArrows)
341
+ - [2D Histogram](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-BasicPlot)
342
+ - [Interactive 2D Histogram](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-Interaction)
343
+ - [Interactive 2D Histogram](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-Usemtcars)
344
+ - [Hexagonal Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-geom_hex)
345
+ - [Hexagonal Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-binsColor)
346
+ - [Hexagonal Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-hexbin)
347
+ - [2D Density Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-2Ddensity)
348
+ - [2D Density Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-2DKernelDensity)
349
+ - [Custom Color Palette for 2D Density Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-ColorPlatte)
350
+ - [3D Density Plot](https://openbiox.github.io/Bizard/Correlation/Density2D.html#fig-3Ddensity)
351
+ - [Variance Explanation and Variable Contribution Visualization](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-1.1fviz_eig)
352
+ - [Variance Explanation and Variable Contribution Visualization](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-1.2fviz_pca_var)
353
+ - [Distribution of Samples in PCA](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-2.1fviz_pca_ind)
354
+ - [Distribution of Samples in PCA](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-2.2fviz_pca_biplot)
355
+ - [Distribution of Samples in PCA](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-2.2ggplot2)
356
+ - [PCA Analysis Using FactoMineR Package](https://openbiox.github.io/Bizard/Correlation/PCAplot.html#fig-3.1FactoMineR)
357
+ - [UMAP Visualization of Clinical Phenotype Data](https://openbiox.github.io/Bizard/Correlation/UMAPplot.html#fig-1-1)
358
+ - [UMAP Visualization of Clinical Phenotype Data](https://openbiox.github.io/Bizard/Correlation/UMAPplot.html#fig-1-2)
359
+ - [Seurat UMAP Visualization](https://openbiox.github.io/Bizard/Correlation/UMAPplot.html#fig-2-1)
360
+ - [ggplot2 Custom UMAP Visualization](https://openbiox.github.io/Bizard/Correlation/UMAPplot.html#fig-3-1)
361
+ - [Basic Biplot](https://openbiox.github.io/Bizard/Correlation/Biplot.html#fig-1.1BasicPlot)
362
+ - [Add Cluster Labels for Biplot](https://openbiox.github.io/Bizard/Correlation/Biplot.html#fig-2.1AddLabel)
363
+ - [Use Sample Names Instead of Points for Biplot](https://openbiox.github.io/Bizard/Correlation/Biplot.html#fig-3.1SampleName)
364
+ - [Basic Ternary Plot](https://openbiox.github.io/Bizard/Correlation/TernaryPlot.html#fig-Fig1)
365
+ - [Theme Change for Ternary Plot](https://openbiox.github.io/Bizard/Correlation/TernaryPlot.html#fig-Fig2)
366
+ - [Theme Change for Ternary Plot](https://openbiox.github.io/Bizard/Correlation/TernaryPlot.html#fig-Fig3)
367
+ - [Beautify Ternary Plot](https://openbiox.github.io/Bizard/Correlation/TernaryPlot.html#fig-Fig4)
368
+ - [RColorBrewer Basic R](https://openbiox.github.io/Bizard/Correlation/Heatmap.html#fig-RColorBrewerBasicR)
369
+
370
+ ## Distribution (分布)
371
+ - [Basic Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-1.1BasicViolin)
372
+ - [Basic Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-1.2BasicViolin)
373
+ - [Basic Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-1.3BasicViolin)
374
+ - [Horizontal Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-2HorizontalViolin)
375
+ - [Violin Plot with Boxplot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-3.1Violinwizbox)
376
+ - [Violin Plot with Boxplot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-3.2Violinwizbox)
377
+ - [Grouped Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-4GroupedViolin)
378
+ - [Half-Violin Plot](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-5Half-ViolinPlot)
379
+ - [Violin Plot Using the ggstatsplot Package](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-6ViolinPlot-ggstatsplot)
380
+ - [Basic Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-BasicDensity)
381
+ - [Basic Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-ThemedDensity)
382
+ - [Mirrored Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-MirroredDensity)
383
+ - [Multiple Groups Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-MultipleGroupsDensity_Diamonds)
384
+ - [Multiple Groups Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-MultipleGroupsDensity_iris)
385
+ - [Faceted Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-FacetedDensity)
386
+ - [Stacked Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-StackedDensity)
387
+ - [Marginal Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-MarginalDensity)
388
+ - [Marginal Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-MarginalDistributions_Parameters)
389
+ - [Annotated Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-AnnotatedDensity)
390
+ - [Annotated Density Plot](https://openbiox.github.io/Bizard/Distribution/Density.html#fig-AnnotatedDensity_Parameters)
391
+ - [Basic Histograms](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-BasicHist)
392
+ - [Basic Histograms](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-bins)
393
+ - [Histogram with Density Curve](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-DensityCurve)
394
+ - [Mirrored Histogram](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-MirroredHistogram)
395
+ - [Overlapping Histograms on the Same Axis](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-OverlappingHistograms)
396
+ - [Faceted Histograms for Multiple Variables](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-FacetedHistograms)
397
+ - [Adding Marginal Distributions Using ggMarginal](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-MarginalDistributions)
398
+ - [Adding Marginal Distributions Using ggMarginal](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-MarginalDistributions_Parameters)
399
+ - [Break BarPlot](https://openbiox.github.io/Bizard/Distribution/BreakPlot.html#fig-BreakPlotFig1)
400
+ - [Break Grouped Scatter Plot](https://openbiox.github.io/Bizard/Distribution/BreakPlot.html#fig-BreakPlotFig2)
401
+ - [Break Line Plot](https://openbiox.github.io/Bizard/Distribution/BreakPlot.html#fig-BreakPlotFig3)
402
+ - [More Advanced Break Plot](https://openbiox.github.io/Bizard/Distribution/BreakPlot.html#fig-BreakPlotFig4)
403
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#basic-plotting-1)
404
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#parameter-adjustment)
405
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#color-settings)
406
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#color-settings)
407
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#color-settings)
408
+ - [Basic Box Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#group-highlighting)
409
+ - [Variable Width Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#variable-width-boxplot)
410
+ - [Variable Width Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#variable-width-boxplot)
411
+ - [Boxplot for Continuous Variables](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#boxplot-for-continuous-variables)
412
+ - [Boxplot with Mean Values](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#boxplot-with-mean-values)
413
+ - [Boxplot with Mean Values](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#boxplot-with-mean-values)
414
+ - [Scatter Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#scatter-boxplot)
415
+ - [Violin Plot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#violin-plot)
416
+ - [Grouped Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#grouped-boxplot)
417
+ - [Grouped Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#grouped-boxplot)
418
+ - [Grouped Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#grouped-boxplot)
419
+ - [Grouped Boxplot](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#grouped-boxplot)
420
+ - [Adding Marginal Distributions to Boxplots](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#adding-marginal-distributions-to-boxplots)
421
+ - [Adding Marginal Distributions to Boxplots](https://openbiox.github.io/Bizard/Distribution/BoxPlot.html#adding-marginal-distributions-to-boxplots)
422
+ - [Basic Ridgeline Plot](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-BasicRidgeline)
423
+ - [Basic Ridgeline Plot](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-BasicRidgeline2)
424
+ - [Histogram Ridgeline Plot](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-ChangingShapes)
425
+ - [Histogram Ridgeline Plot](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-ChangingShapes2)
426
+ - [Ridgeline Plot with Variable Colors](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-ChangingColors)
427
+ - [Ridgeline Plot with Variable Colors](https://openbiox.github.io/Bizard/Distribution/Ridgeline.html#fig-ChangingColors2)
428
+ - [Basic Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-BasicBee)
429
+ - [Basic Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-BasicBee2)
430
+ - [Flipping Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-Flip)
431
+ - [Changing Basic Features of Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-Features)
432
+ - [Changing Basic Features of Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-Features2)
433
+ - [Grouping Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-grouping)
434
+ - [Grouping Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-grouping2)
435
+ - [Custom Position Behavior of Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-CustomPositionBehavior)
436
+ - [Custom Position Behavior of Beeswarm Plot](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-CustomPositionBehavior2)
437
+ - [Basic Beeswarm Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-Basicggbeeswarm)
438
+ - [Basic Beeswarm Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-BasicggBee2)
439
+ - [Flipping Beeswarm Plot Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggFlip)
440
+ - [Flipping Beeswarm Plot Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggFlip2)
441
+ - [Customization of Beeswarm Plot Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggFeatures)
442
+ - [Customization of Beeswarm Plot Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggFeatures2)
443
+ - [Changing Position of Points Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-PositionOfPoint)
444
+ - [Customizing Color of Points Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ColorPoints)
445
+ - [Grouping and Adding Statistical Analysis Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggGrouping)
446
+ - [Grouping and Adding Statistical Analysis Using the ggbeeswarm Package](https://openbiox.github.io/Bizard/Distribution/Beeswarm.html#fig-ggGrouping2)
447
+ - [Radial Column Chart](https://openbiox.github.io/Bizard/Distribution/RadialColumnChart.html#fig-1.1BasicRadial)
448
+ - [Radial Column Chart](https://openbiox.github.io/Bizard/Distribution/RadialColumnChart.html#fig-1.2LabeledRadial)
449
+ - [More Advanced Radial Column Chart](https://openbiox.github.io/Bizard/Distribution/RadialColumnChart.html#fig-2.1DensityCurve)
450
+ - [More Advanced Radial Column Chart](https://openbiox.github.io/Bizard/Distribution/RadialColumnChart.html#fig-2.2DensityCurve)
451
+ - [Histogram mean or median distribution distance](https://openbiox.github.io/Bizard/Distribution/Histogram.html#fig-OverlappingHistogramsMean)
452
+ - [Basic violin plot with significance annotation of differences between groups](https://openbiox.github.io/Bizard/Distribution/ViolinPlot.html#fig-1.4BasicViolinSignificance)
453
+
454
+ ## Evolution
455
+ - [Basic Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#fig-BasicPlot)
456
+ - [Change Line Style for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#change-line-style)
457
+ - [Y-axis Scale Logarithmic for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#y-axis-scale-logarithmic)
458
+ - [Y-axis Scale Logarithmic for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#y-axis-scale-logarithmic)
459
+ - [Multi-class Data Plotting for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#multi-class-data-plotting)
460
+ - [Color Selection for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#use-the-viridis-package)
461
+ - [Color Selection for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#custom-colors)
462
+ - [Connect the Line Segments in the Scatter Plot](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#basic-plot-line-styles)
463
+ - [Connect the Line Segments in the Scatter Plot](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#connect-according-to-time-sequence)
464
+ - [Connect the Line Segments in the Scatter Plot](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#timing-connection-arrow)
465
+ - [Plotting the Regression Curve for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#regression-curve)
466
+ - [Plotting the Regression Curve for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#regression-curve-confidence-interval)
467
+ - [Plotting the Regression Curve for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#add-regression-curve-labels)
468
+ - [Notes and Separators for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#notes-and-separators)
469
+ - [Multi-subgraph Arrangement for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#multi-subgraph-arrangement)
470
+ - [Dual Y-axis for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#dual-y-axis)
471
+ - [Line Chart and Histogram](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#line-chart-histogram)
472
+ - [Emphasis on Specific Line Segments for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#emphasis-on-specific-line-segments)
473
+ - [Emphasis on Specific Line Segments for Line Chart](https://openbiox.github.io/Bizard/DataOverTime/LineChart.html#emphasis-on-specific-line-segments)
474
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#basic-area-plot)
475
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#custom-area-plot)
476
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#add-gradient-colors)
477
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#gradient-colors-with-transparency)
478
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#fully-customized-area-map-with-gradient)
479
+ - [Basic Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#drawing-area-plots-using-basic-r)
480
+ - [Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#basic-stacked-area-diagram)
481
+ - [Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#controlling-the-stacking-order-in-ggplot2)
482
+ - [Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#controlling-the-stacking-order-in-ggplot2)
483
+ - [Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#controlling-the-stacking-order-in-ggplot2)
484
+ - [Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#custom-styles)
485
+ - [Proportional Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#proportional-stacked-area-diagram)
486
+ - [Interactive Area Chart](https://openbiox.github.io/Bizard/DataOverTime/AreaChart.html#interactive-area-plot)
487
+ - [Basic Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#basic-stacked-area-diagram)
488
+ - [Basic Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#basic-stacked-area-diagram)
489
+ - [Proportional Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#proportional-stacked-area-diagram)
490
+ - [Proportional Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#proportional-stacked-area-diagram)
491
+ - [Customization Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#customization)
492
+ - [Interactive Stacked Area Chart](https://openbiox.github.io/Bizard/DataOverTime/StackedArea.html#interactive-stacked-area-map)
493
+ - [Basic Streamgraph](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#basic-code)
494
+ - [Basic Streamgraph](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#add-dropdown-button)
495
+ - [Basic Streamgraph](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#change-shape)
496
+ - [Basic Streamgraph](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#change-color)
497
+ - [Streamgraph Offset](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#silhouette)
498
+ - [Streamgraph Offset](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#zero)
499
+ - [Streamgraph Offset](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#expand)
500
+ - [Streamgraph Using ggplot2](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#basic-code-1)
501
+ - [Streamgraph Using ggplot2](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#beautify-plot)
502
+ - [Streamgraph Using ggplot2](https://openbiox.github.io/Bizard/DataOverTime/Streamgraph.html#taking-chickweight-data-as-an-example)
503
+ - [Basic Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#basic-plot)
504
+ - [Display Observation Point for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#display-observation-point)
505
+ - [Multi-class Data for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#multi-class-data-plotting)
506
+ - [Change X-axis Date Labels for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#format-the-date-labels)
507
+ - [Change X-axis Date Labels for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#set-the-display-interval-for-date-labels)
508
+ - [Adjust Label Angle for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#adjust-label-angle)
509
+ - [Time Limit for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#time-limit)
510
+ - [Notes and Separators for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#notes-and-separators)
511
+ - [Subgraph Merging for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#subgraph-merging)
512
+ - [Dual Y-axis for Timeseries Chart](https://openbiox.github.io/Bizard/DataOverTime/Timeseries.html#dual-y-axis)
513
+ - [Chinese Calendar](https://openbiox.github.io/Bizard/DataOverTime/CalendHighlight.html#chinese-calendar)
514
+ - [English Calendar](https://openbiox.github.io/Bizard/DataOverTime/CalendHighlight.html#english-calendar)
515
+ - [Calendar Period](https://openbiox.github.io/Bizard/DataOverTime/CalendHighlight.html#calendar-period)
516
+
517
+ ## GeneStructurePlot
518
+ - [Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-1.1BasicPlot)
519
+ - [Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-1.2GeneGroup)
520
+ - [Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-1.3SubStructure)
521
+ - [Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-1.4GeneLabel)
522
+ - [Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-1.5ggtree)
523
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.1theme_genes)
524
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#modify-color)
525
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.2.2Color)
526
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.2.3Color)
527
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.3Label)
528
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.4arrow)
529
+ - [Beautify Gene Structure Plot](https://openbiox.github.io/Bizard/Omics/GeneStructurePlot.html#fig-2.5forward)
530
+
531
+ ## GwasSnpPlot
532
+ - [GWAS Circos Plot](https://openbiox.github.io/Bizard/Omics/GwasSnpPlot.html#fig-1GwasSnpCircos)
533
+ - [GWAS Circos Plot](https://openbiox.github.io/Bizard/Omics/GwasSnpPlot.html#fig-2GwasSnpDensity)
534
+ - [GWAS Circos Plot](https://openbiox.github.io/Bizard/Omics/GwasSnpPlot.html#manhattan-plot-for-snp-screening)
535
+ - [GWAS Circos Plot](https://openbiox.github.io/Bizard/Omics/GwasSnpPlot.html#fig-4GwasSnpQQ-1)
536
+
537
+ ## Julia (Julia)
538
+ - [Scatter Plot (Julia)](https://openbiox.github.io/Bizard/Julia/ScatterPlot.html)
539
+ - [Violin Plot (Julia)](https://openbiox.github.io/Bizard/Julia/ViolinPlot.html)
540
+ - [Heatmap (Julia)](https://openbiox.github.io/Bizard/Julia/Heatmap.html)
541
+
542
+ ## KEGGPathwayPlot
543
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-1)
544
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-2)
545
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-3)
546
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-4)
547
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-5)
548
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-6)
549
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-7)
550
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-8)
551
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-9)
552
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-10)
553
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-11)
554
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-12)
555
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-13)
556
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-14)
557
+ - [KEGG Pathway Plot](https://openbiox.github.io/Bizard/Omics/KeggPathwayPlot.html#fig-1-15)
558
+
559
+ ## KaplanMeierPlot
560
+ - [Kaplan Meier Plot](https://openbiox.github.io/Bizard/Clinics/KaplanMeierPlot.html#fig-1.1basicKM)
561
+ - [Kaplan Meier Plot](https://openbiox.github.io/Bizard/Clinics/KaplanMeierPlot.html#fig-1.2basicKM)
562
+ - [Kaplan Meier Plot](https://openbiox.github.io/Bizard/Clinics/KaplanMeierPlot.html#fig-Fig2-1)
563
+
564
+ ## LollipopPlot
565
+ - [Lollipop Plot](https://openbiox.github.io/Bizard/Clinics/LollipopPlot.html#fig-1.1BasicPlot)
566
+ - [Lollipop Plot](https://openbiox.github.io/Bizard/Clinics/LollipopPlot.html#fig-1.2BasicPlot)
567
+ - [Lollipop Plot](https://openbiox.github.io/Bizard/Clinics/LollipopPlot.html#fig-2.1AddLegend)
568
+ - [Lollipop Plot](https://openbiox.github.io/Bizard/Clinics/LollipopPlot.html#fig-3.1BeautifyPlot)
569
+ - [Lollipop Plot](https://openbiox.github.io/Bizard/Clinics/LollipopPlot.html#fig-4.1EnrichPlot)
570
+
571
+ ## MAP
572
+ - [Africa Map](https://openbiox.github.io/Bizard/Hiplot/096-map-africa.html)
573
+ - [Americas Map](https://openbiox.github.io/Bizard/Hiplot/097-map-americas.html)
574
+ - [China Map (City)](https://openbiox.github.io/Bizard/Hiplot/098-map-china-city.html)
575
+ - [China Map (County)](https://openbiox.github.io/Bizard/Hiplot/099-map-china-county.html)
576
+ - [China Map](https://openbiox.github.io/Bizard/Hiplot/100-map-china.html)
577
+ - [China Map 2](https://openbiox.github.io/Bizard/Hiplot/101-map-china2.html)
578
+ - [Europe Map](https://openbiox.github.io/Bizard/Hiplot/102-map-europe.html)
579
+ - [France Map (Town)](https://openbiox.github.io/Bizard/Hiplot/103-map-france-town.html)
580
+ - [France Map](https://openbiox.github.io/Bizard/Hiplot/104-map-france.html)
581
+ - [Germany Map (Town)](https://openbiox.github.io/Bizard/Hiplot/106-map-germany-town.html)
582
+ - [Germany Map](https://openbiox.github.io/Bizard/Hiplot/107-map-germany.html)
583
+ - [North America Map](https://openbiox.github.io/Bizard/Hiplot/108-map-north-america.html)
584
+ - [Oceania/Antarc Map](https://openbiox.github.io/Bizard/Hiplot/109-map-oceania-antarc.html)
585
+ - [South America Map](https://openbiox.github.io/Bizard/Hiplot/111-map-south-america.html)
586
+ - [UK Map (City)](https://openbiox.github.io/Bizard/Hiplot/112-map-uk-city.html)
587
+ - [UK Map](https://openbiox.github.io/Bizard/Hiplot/113-map-uk.html)
588
+ - [USA Map (County)](https://openbiox.github.io/Bizard/Hiplot/114-map-usa-county.html)
589
+ - [USA Map (States)](https://openbiox.github.io/Bizard/Hiplot/115-map-usa.html)
590
+ - [World Map](https://openbiox.github.io/Bizard/Hiplot/116-map-world.html)
591
+ - [World Map 2](https://openbiox.github.io/Bizard/Hiplot/117-map-world2.html)
592
+
593
+ ## ManhattanPlot
594
+ - [Manhattan Plot Using qqman Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-1.1Basicmanhattan)
595
+ - [Manhattan Plot Using qqman Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-1.2Color)
596
+ - [Manhattan Plot Using qqman Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-1.3Highlight)
597
+ - [Manhattan Plot Using qqman Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-1.4annotatePval)
598
+ - [Manhattan Plot Using ggplot2 Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-2.1ggplot2)
599
+ - [Manhattan Plot Using ggplot2 Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-2.2Color)
600
+ - [Manhattan Plot Using ggplot2 Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-2.3Highlight)
601
+ - [Manhattan Plot Using ggplot2 Package](https://openbiox.github.io/Bizard/Omics/ManhattanPlot.html#fig-2.4double)
602
+
603
+ ## Meta-AnalysisForestPlot
604
+ - [Meta-Analysis Forest Plot](https://openbiox.github.io/Bizard/Clinics/MetaForestPlot.html#fig-1.1BasicPlot)
605
+ - [Meta-Analysis Forest Plot](https://openbiox.github.io/Bizard/Clinics/MetaForestPlot.html#fig-1.2BasicPlot)
606
+ - [Meta-Analysis Forest Plot](https://openbiox.github.io/Bizard/Clinics/MetaForestPlot.html#fig-2.1BasicPlot)
607
+
608
+ ## MosaicPlot
609
+ - [Mosaic Plot](https://openbiox.github.io/Bizard/Clinics/MosaicPlot.html#fig-1.1basicplot)
610
+ - [Mosaic Plot](https://openbiox.github.io/Bizard/Clinics/MosaicPlot.html#fig-1.2basicplot)
611
+ - [Mosaic Plot](https://openbiox.github.io/Bizard/Clinics/MosaicPlot.html#fig-2.1vcd)
612
+ - [Mosaic Plot](https://openbiox.github.io/Bizard/Clinics/MosaicPlot.html#fig-2.2graphics)
613
+
614
+ ## MotifPlot
615
+ - [Basic Motif](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-1BasicMotif-1)
616
+ - [Basic Motif](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-1BasicMotif-2)
617
+ - [Basic Motif](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-1BasicMotif-3)
618
+ - [Multi-motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-2MultiMotif)
619
+ - [Adjust color scheme for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-1ColorMotif1)
620
+ - [Adjust color scheme for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-1ColorMotif2)
621
+ - [Adjust color scheme for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-1ColorMotif3)
622
+ - [Adjust color scheme for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-1ColorMotif4)
623
+ - [Adjust font and stacking for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-2FontMotif)
624
+ - [Adjust the axes and themes for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-3-3ThemeMotif)
625
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4MethodMotif)
626
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4NamespaceMotif1)
627
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4NamespaceMotif2)
628
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4CustomHeightMotif)
629
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4LabelMotif)
630
+ - [Advanced features for motif plot](https://openbiox.github.io/Bizard/Omics/MotifPlot.html#fig-4CowplotMotif)
631
+
632
+ ## MultiSeqsAlignment
633
+ - [Multiple Sequences Alignment](https://openbiox.github.io/Bizard/Omics/MultiSeqsAlignment.html#fig-1MultiSeqsAlignmentProtein)
634
+ - [Multiple Sequences Alignment](https://openbiox.github.io/Bizard/Omics/MultiSeqsAlignment.html#fig-1MultiSeqsAlignmentStats)
635
+ - [Multiple Sequences Alignment](https://openbiox.github.io/Bizard/Omics/MultiSeqsAlignment.html#fig-1MultiSeqsAlignmentLogo)
636
+
637
+ ## MultiVolcanoPlot
638
+ - [Basic Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#fig-1.1BasicPlot)
639
+ - [Basic Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#fig-1.2myMarkers)
640
+ - [Basic Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#fig-1.3log2FC.cutoff)
641
+ - [Basic Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#fig-1.4col.type)
642
+ - [Direction Rotation of Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#direction-of-rotation)
643
+ - [Polar Coordinates of Multiple Volcano Plot](https://openbiox.github.io/Bizard/Omics/MultiVolcanoPlot.html#polar-coordinates)
644
+
645
+ ## NetworkPlot
646
+ - [Build Network Plot](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#build-network)
647
+ - [Add Annotation to Nework Plot](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#add-annotation)
648
+ - [Filter Subnetwork](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#filter-subnetwork)
649
+ - [Merge Network](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#merge-network)
650
+ - [Merge Network](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#merge-network)
651
+ - [Merge Network](https://openbiox.github.io/Bizard/Omics/NetworkPlot.html#merge-network)
652
+
653
+ ## Nomogram
654
+ - [Nomogram](https://openbiox.github.io/Bizard/Clinics/Nomogram.html#fig-1.1BasicNomogram)
655
+ - [Nomogram](https://openbiox.github.io/Bizard/Clinics/Nomogram.html#fig-1.2BasicNomogram)
656
+ - [Nomogram](https://openbiox.github.io/Bizard/Clinics/Nomogram.html#fig-1.3BasicNomogram)
657
+ - [Nomogram](https://openbiox.github.io/Bizard/Clinics/Nomogram.html#fig-2-1)
658
+ - [Nomogram](https://openbiox.github.io/Bizard/Clinics/Nomogram.html#fig-2-2)
659
+
660
+ ## OMICS
661
+ - [Barplot Color Group](https://openbiox.github.io/Bizard/Hiplot/004-barplot-color-group.html)
662
+ - [Barplot Gradient](https://openbiox.github.io/Bizard/Hiplot/008-barplot-gradient.html)
663
+ - [Corrplot Big Data](https://openbiox.github.io/Bizard/Hiplot/013-big-corrplot.html)
664
+ - [Bubble](https://openbiox.github.io/Bizard/Hiplot/016-bubble.html)
665
+ - [Chord Plot](https://openbiox.github.io/Bizard/Hiplot/020-chord.html)
666
+ - [Correlation Heatmap](https://openbiox.github.io/Bizard/Hiplot/030-cor-heatmap.html)
667
+ - [Corrplot](https://openbiox.github.io/Bizard/Hiplot/033-corrplot.html)
668
+ - [Dendrogram](https://openbiox.github.io/Bizard/Hiplot/037-dendrogram.html)
669
+ - [2D Diffusion Map](https://openbiox.github.io/Bizard/Hiplot/042-diffusion-map.html#d)
670
+ - [3D Diffusion Map](https://openbiox.github.io/Bizard/Hiplot/042-diffusion-map.html#d-1)
671
+ - [DIY GSEA](https://openbiox.github.io/Bizard/Hiplot/044-diy-gsea.html)
672
+ - [Dotchart](https://openbiox.github.io/Bizard/Hiplot/046-dotchart.html)
673
+ - [Fishplot](https://openbiox.github.io/Bizard/Hiplot/055-fishplot.html)
674
+ - [Funnel Plot (metafor)](https://openbiox.github.io/Bizard/Hiplot/057-funnel-plot-metafor.html)
675
+ - [Funnel Plot](https://openbiox.github.io/Bizard/Hiplot/058-funnel-plot.html)
676
+ - [Gene Density](https://openbiox.github.io/Bizard/Hiplot/060-gene-density.html)
677
+ - [Gene Ranking Dotplot](https://openbiox.github.io/Bizard/Hiplot/061-gene-rank.html)
678
+ - [Gene Cluster Trend](https://openbiox.github.io/Bizard/Hiplot/062-gene-trend.html)
679
+ - [Seqlogo](https://openbiox.github.io/Bizard/Hiplot/074-ggseqlogo.html)
680
+ - [GOBar Plot](https://openbiox.github.io/Bizard/Hiplot/077-gobar.html)
681
+ - [GOBubble Plot](https://openbiox.github.io/Bizard/Hiplot/078-gobubble.html)
682
+ - [GOCircle Plot](https://openbiox.github.io/Bizard/Hiplot/079-gocircle.html)
683
+ - [Heatmap](https://openbiox.github.io/Bizard/Hiplot/086-heatmap.html)
684
+ - [Hi-C Heatmap](https://openbiox.github.io/Bizard/Hiplot/087-hic-heatmap.html)
685
+ - [Matrix Bubble](https://openbiox.github.io/Bizard/Hiplot/118-matrix-bubble.html)
686
+ - [PCA2](https://openbiox.github.io/Bizard/Hiplot/135-pca2.html)
687
+ - [PCAtools](https://openbiox.github.io/Bizard/Hiplot/136-pcatools.html)
688
+ - [EnhancedMA](https://openbiox.github.io/Bizard/Hiplot/143-pseudo-enhanced-ma.html)
689
+ - [QQ Plot](https://openbiox.github.io/Bizard/Hiplot/148-qqplot.html)
690
+ - [Rose Chart](https://openbiox.github.io/Bizard/Hiplot/157-rose-chart.html)
691
+ - [Stack Violin](https://openbiox.github.io/Bizard/Hiplot/166-stack-violin.html)
692
+ - [Treeheatr](https://openbiox.github.io/Bizard/Hiplot/172-treeheatr.html)
693
+ - [tSNE](https://openbiox.github.io/Bizard/Hiplot/175-tsne.html)
694
+ - [UMAP](https://openbiox.github.io/Bizard/Hiplot/176-umap.html)
695
+ - [Volcano](https://openbiox.github.io/Bizard/Hiplot/183-volcano.html)
696
+
697
+ ## PopulationMapPlot
698
+ - [Population Map Plot](https://openbiox.github.io/Bizard/Omics/PopulationMapPlot.html#fig-1BasicPopulationMapPlot1)
699
+ - [Population Map Plot](https://openbiox.github.io/Bizard/Omics/PopulationMapPlot.html#fig-1BasicPopulationMapPlot2)
700
+ - [Population Map Plot](https://openbiox.github.io/Bizard/Omics/PopulationMapPlot.html#fig-1AdvancedPopulationMapPlot1)
701
+
702
+ ## Proportion (比例)
703
+ - [Circular Plot](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#basic-plot)
704
+ - [Customization Circular Plot](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#custom)
705
+ - [Circular Plot Type](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#circular-plot-type)
706
+ - [Circular Plot Type](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#circular-plot-type)
707
+ - [Circular Plot Type](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#circular-plot-type)
708
+ - [Circular Plot Type](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#circular-plot-type)
709
+ - [Part Circular Plot](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#draw-a-part)
710
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#add-link)
711
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#basic-chord-diagram)
712
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#basic-chord-diagram)
713
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#faceted-chord-diagram)
714
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#directional-layered-chord-diagram)
715
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#highly-customized-chord-diagrams)
716
+ - [Chord Diagram](https://openbiox.github.io/Bizard/Proportion/ChordDiagram.html#interactive-chord-diagram)
717
+ - [Custom Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#custom-nodes-links-and-tags)
718
+ - [Layout for Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#layout)
719
+ - [Variable Mapping for Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#variable-classification-mapping-to-nodes)
720
+ - [Variable Mapping for Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#variable-mapping-to-link)
721
+ - [Node Size Mapping for Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#node-size-maps-to-number-of-connections)
722
+ - [Clustering for Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#clustering-results-visualization)
723
+ - [3D Interactive Network Graph](https://openbiox.github.io/Bizard/Proportion/Network.html#d-interactive-network-diagram)
724
+ - [Sankey Diagram Using networkD3 Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#basic-sankey-diagram)
725
+ - [Sankey Diagram Using networkD3 Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#customizing-colors)
726
+ - [Sankey Diagram Using networkD3 Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#customizing-colors)
727
+ - [Sankey Diagram Using ggalluvial Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#basic-sankey-diagram-1)
728
+ - [Sankey Diagram Using ggalluvial Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#changing-line-types)
729
+ - [Sankey Diagram Using ggalluvial Package](https://openbiox.github.io/Bizard/Proportion/Sankey.html#changing-line-types)
730
+ - [Basic Arc Diagram](https://openbiox.github.io/Bizard/Proportion/ArcDiagram.html#basic-arc-diagram-1)
731
+ - [Node Colors for Arc Diagram](https://openbiox.github.io/Bizard/Proportion/ArcDiagram.html#map-group-information-to-node-colors)
732
+ - [Complex Arc Diagram](https://openbiox.github.io/Bizard/Proportion/ArcDiagram.html#drawing-complex-graph-structures)
733
+ - [Complex Arc Diagram](https://openbiox.github.io/Bizard/Proportion/ArcDiagram.html#drawing-complex-graph-structures)
734
+ - [Thickness of Arc Diagram](https://openbiox.github.io/Bizard/Proportion/ArcDiagram.html#the-thickness-of-the-arc-is-defined-according-to-the-edge-weight.)
735
+ - [Basic Dice Plot](https://openbiox.github.io/Bizard/Proportion/DicePlot.html#fig-1BasicDice)
736
+ - [Advanced Dice Plot with Continuous Variables](https://openbiox.github.io/Bizard/Proportion/DicePlot.html#fig-2AdvancedDice)
737
+ - [Dice Plot with custom theme](https://openbiox.github.io/Bizard/Proportion/DicePlot.html#fig-3ThemedDice)
738
+ - [Four data types of drawing examples](https://openbiox.github.io/Bizard/Proportion/Network.html#fig1Plotdata)
739
+
740
+ ## Python (Python)
741
+ - [Scatter Plot (Python)](https://openbiox.github.io/Bizard/Python/ScatterPlot.html)
742
+ - [Violin Plot (Python)](https://openbiox.github.io/Bizard/Python/ViolinPlot.html)
743
+ - [Heatmap (Python)](https://openbiox.github.io/Bizard/Python/Heatmap.html)
744
+ - [Volcano Plot (Python)](https://openbiox.github.io/Bizard/Python/VolcanoPlot.html)
745
+ - [Basic Heatmap of Gene Expression](https://openbiox.github.io/Bizard/Python/Heatmap.html#fig-py-heatmap-basic)
746
+ - [Clustered Heatmap with Dendrograms](https://openbiox.github.io/Bizard/Python/Heatmap.html#fig-py-heatmap-cluster)
747
+ - [Correlation Matrix Heatmap](https://openbiox.github.io/Bizard/Python/Heatmap.html#fig-py-heatmap-corr)
748
+ - [Basic Scatter Plot with Iris Data](https://openbiox.github.io/Bizard/Python/ScatterPlot.html#fig-py-scatter-basic)
749
+ - [Scatter Plot with Linear Regression](https://openbiox.github.io/Bizard/Python/ScatterPlot.html#fig-py-scatter-regression)
750
+ - [Joint Plot with Marginal Distributions](https://openbiox.github.io/Bizard/Python/ScatterPlot.html#fig-py-scatter-joint)
751
+ - [Split Violin Plot for Gene Expression](https://openbiox.github.io/Bizard/Python/ViolinPlot.html#fig-py-violin-split)
752
+ - [Basic Volcano Plot](https://openbiox.github.io/Bizard/Python/VolcanoPlot.html#fig-py-volcano-basic)
753
+ - [Volcano Plot with Top Gene Labels](https://openbiox.github.io/Bizard/Python/VolcanoPlot.html#fig-py-volcano-labels)
754
+ - [Enhanced Volcano Plot with Highlighted Regions](https://openbiox.github.io/Bizard/Python/VolcanoPlot.html#fig-py-volcano-enhanced)
755
+
756
+ ## Ranking (排序)
757
+ - [Basic Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-BasicPlot)
758
+ - [Basic Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-coord_flip)
759
+ - [Basic Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Color)
760
+ - [Basic Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Grey)
761
+ - [Basic Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Pattern)
762
+ - [Variable Width Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Barwidth)
763
+ - [Error Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-BasicErrorbar)
764
+ - [Error Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-MultiErrorbar)
765
+ - [Error Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-pvalue)
766
+ - [Stacked Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-stack)
767
+ - [Percentage Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-percent)
768
+ - [Side-By-Side Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-dodge2)
769
+ - [Deformation of Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Pyramid)
770
+ - [Deformation of Bar Plot](https://openbiox.github.io/Bizard/Ranking/BarPlot.html#fig-Deviation)
771
+ - [Basic Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-BasicPlot)
772
+ - [Basic Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-BasicPlotTCGA)
773
+ - [Basic Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-parameter)
774
+ - [Multi-Group Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-Multigroup)
775
+ - [Multi-Group Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-Adjustpara)
776
+ - [Multi-Group Radar Plot](https://openbiox.github.io/Bizard/Ranking/Radar.html#fig-AdjustparaTCGA)
777
+ - [Basic Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#basic-plotting)
778
+ - [Set Color for Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#set-color)
779
+ - [Set Color for Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#set-color)
780
+ - [Set Color for Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#set-color)
781
+ - [Set Shape for Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#set-shape)
782
+ - [Wordcloud Rotation](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#word-cloud-rotation)
783
+ - [Wordcloud Rotation](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#word-cloud-rotation)
784
+ - [English Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#english-word-cloud)
785
+ - [English Wordcloud](https://openbiox.github.io/Bizard/Ranking/Wordcloud.html#english-word-cloud)
786
+ - [Basic Parallel Coordinates Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-BasicPlot)
787
+ - [Basic Parallel Coordinates Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-CustomColor)
788
+ - [Basic Parallel Coordinates Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-scale)
789
+ - [Basic Parallel Coordinates Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-highlight)
790
+ - [Parallel Coordinates Plot Using MASS Package](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-MASS)
791
+ - [Parallel Coordinates Plot Using MASS Package](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-MASSlegend)
792
+ - [Parallel Coordinates Plot Using MASS Package](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-MASSreorder)
793
+ - [Parallel Coordinates Plot Using MASS Package](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-MASShighlight)
794
+ - [Bump Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-BasicBump)
795
+ - [Bump Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-BumpChangeColor)
796
+ - [Bump Plot](https://openbiox.github.io/Bizard/Ranking/Parallel.html#fig-BumpLabel)
797
+ - [Basic Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-BasicPlot)
798
+ - [Basic Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-Basicpenguin)
799
+ - [Customize Appearance for Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-Colorstyle)
800
+ - [Customize Appearance for Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-flip)
801
+ - [Highlight Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-highlight)
802
+ - [Color differentiation for Lollipop Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-ifelse)
803
+ - [Dumbbell Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-dumbbell)
804
+ - [Dumbbell Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-Addmean)
805
+ - [Dumbbell Plot](https://openbiox.github.io/Bizard/Ranking/Lollipop.html#fig-AddDef)
806
+ - [Basic Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-BasicPlot)
807
+ - [Basic Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-Addlabel)
808
+ - [Basic Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-Addgap)
809
+ - [Grouping Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-Addgroupgap)
810
+ - [Grouping Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-Addgroupgap-size)
811
+ - [Beautify Circular Barplot](https://openbiox.github.io/Bizard/Ranking/CircularBarplot.html#fig-Beautify1)
812
+ - [Basic Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-BasicPlot)
813
+ - [Centered Data for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-align)
814
+ - [Add Title for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-Addtitle)
815
+ - [Add Footnotes for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-footnote)
816
+ - [Add Merge Cell Label for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-merge)
817
+ - [Add Highlighted Columns/Rows for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-highlight)
818
+ - [Add Text for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-Addtext)
819
+ - [Change Style for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-treeline)
820
+ - [Change Style for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-wholeline)
821
+ - [Change Text Style for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-textstyle)
822
+ - [Change Fill Style for Table](https://openbiox.github.io/Bizard/Ranking/Table.html#fig-Fillstyle)
823
+ - [Basic Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-1.1BasicVeen)
824
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.1Color1)
825
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.2Color2)
826
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.3Color3)
827
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.4Color4)
828
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.5edge)
829
+ - [Beautify Venn Plot](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-2.6font)
830
+ - [VennDiagram](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-3.1venn.diagram)
831
+ - [VennDiagram](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-3.2Color)
832
+ - [VennDiagram](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-3.3line)
833
+ - [VennDiagram](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-3.4font)
834
+ - [VennDiagram](https://openbiox.github.io/Bizard/Ranking/VennPlot.html#fig-3.5scaled)
835
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.1BasicUpset-1)
836
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.1BasicUpset-2)
837
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.1BasicUpset-3)
838
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.2nsets)
839
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.3order.by-1)
840
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.3order.by-2)
841
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.3order.by-3)
842
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.4sets)
843
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.5empty.intersections)
844
+ - [Basic Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-1.6decreasing)
845
+ - [Personalized Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-2.1mb.ratio)
846
+ - [Personalized Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-2.2color)
847
+ - [Personalized Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-2.3queries)
848
+ - [Personalized Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-2.4font)
849
+ - [Advanced Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-3.1params)
850
+ - [Advanced Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-3.2expression)
851
+ - [Advanced Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-3.3continue)
852
+ - [Advanced Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-3.4attribute.plots)
853
+ - [Advanced Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-3.5boxplot.summary)
854
+ - [Biological Data Example for Upset Plot](https://openbiox.github.io/Bizard/Ranking/UpsetPlot.html#fig-4.1boxplot.summary)
855
+
856
+ ## RegressionAnalysisTable
857
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-1.1BasicRegressionTable)
858
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-2.1tbl_regression)
859
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-3.1global-p)
860
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-4.1q-value)
861
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-5.1Merge)
862
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-6.1Merge)
863
+ - [Regression Analysis Table](https://openbiox.github.io/Bizard/Clinics/RegressionTable.html#fig-6.2Merge)
864
+
865
+ ## SankeyBubblePlot
866
+ - [Sankey Diagram](https://openbiox.github.io/Bizard/Omics/SankeyBubblePlot.html#fig-1.1Sankey)
867
+ - [Bubble Plot](https://openbiox.github.io/Bizard/Omics/SankeyBubblePlot.html#fig-2.1Bubble)
868
+ - [Sankey Bubble plot](https://openbiox.github.io/Bizard/Omics/SankeyBubblePlot.html)
869
+
870
+ ## SyntenyBlocksPlot
871
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-1.1AdjustOrder1)
872
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-1.2AdjustOrder2)
873
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-2.1BestParameter)
874
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-3.1SyntenyBlocks1-1)
875
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-3.1SyntenyBlocks1-2)
876
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-3.1SyntenyBlocks1-3)
877
+ - [Synteny Blocks Plot](https://openbiox.github.io/Bizard/Omics/SyntenyBlocksPlot.html#fig-3.2SyntenyBlocks2)
878
+
879
+ ## TextEnrichmentBarPlot
880
+ - [Basic Text Enrichment BarPlot](https://openbiox.github.io/Bizard/Omics/TextEnrichmentBarPlot.html#basic-plotting-simplified-version)
881
+ - [Advanced Enrichment Analysis Barplot](https://openbiox.github.io/Bizard/Omics/TextEnrichmentBarPlot.html#advanced-plotting-detailed-version)
882
+
883
+ ## VolcanoPlot
884
+ - [Basic Volcano Plot](https://openbiox.github.io/Bizard/Omics/VolcanoPlot.html#basic-volcano-plot)
885
+ - [Labeled Volcano Plot](https://openbiox.github.io/Bizard/Omics/VolcanoPlot.html#labeled-volcano-plot)
886
+
887
+ ## iVolcanoPlot
888
+ - [Basic Interactive Volcano Plot](https://openbiox.github.io/Bizard/Omics/iVolcanoPlot.html#fig-1.1BasicPlot)
889
+ - [Dual Thresholds Interactive Volcano Plot](https://openbiox.github.io/Bizard/Omics/iVolcanoPlot.html#fig-1.2FigureYa)
890
+ - [Pathway Linked Interactive Volcano Plot](https://openbiox.github.io/Bizard/Omics/iVolcanoPlot.html#fig-3.1PathwayVolcano)
891
+ - [Interactive Volcano Plot with NCBI Link](https://openbiox.github.io/Bizard/Omics/iVolcanoPlot.html#fig-2.1Onclick_fun)
892
+ - [Interactive Volcano Plot Demo](https://openbiox.github.io/Bizard/Omics/iVolcanoPlot.html)