@open-mercato/cli 0.6.7-develop.6863.1.61001cf9a8 → 0.6.7

package/dist/lib/agentic-setup.js

@@ -1,27 +1,10 @@
-import {
-  chmodSync,
-  copyFileSync,
-  existsSync,
-  lstatSync,
-  mkdirSync,
-  mkdtempSync,
-  readFileSync,
-  readdirSync,
-  realpathSync,
-  renameSync,
-  rmSync,
-  statSync,
-  writeFileSync
-} from "node:fs";
-import { createHash } from "node:crypto";
+import { existsSync, mkdirSync, readFileSync, writeFileSync, copyFileSync, symlinkSync, lstatSync, unlinkSync, readdirSync } from "node:fs";
 import { spawnSync } from "node:child_process";
-import { tmpdir } from "node:os";
-import { join, dirname, basename, relative, resolve, sep } from "node:path";
+import { join, dirname, basename } from "node:path";
 import { fileURLToPath } from "node:url";
 import { Project, SyntaxKind } from "ts-morph";
-const moduleDir = dirname(fileURLToPath(import.meta.url));
-const bundledAgenticDir = join(moduleDir, "..", "agentic");
-const AGENTIC_DIR = existsSync(bundledAgenticDir) ? bundledAgenticDir : join(moduleDir, "..", "..", "..", "create-app", "agentic");
+const __dirname = dirname(fileURLToPath(import.meta.url));
+const AGENTIC_DIR = join(__dirname, "..", "agentic");
 const GUIDES_DIR = join(AGENTIC_DIR, "guides");
 function resolvePlaceholders(content, config) {
   return content.replace(/\{\{PROJECT_NAME\}\}/g, config.projectName);
@@ -42,13 +25,13 @@ function copyFile(srcDir, srcRelative, destPath) {
   copyFileSync(srcPath, destPath);
 }
 function readEnabledModuleIds(modulesPath) {
-  if (!existsSync(modulesPath)) return { parsed: false, ids: [] };
+  if (!existsSync(modulesPath)) return [];
   try {
     const project = new Project({ useInMemoryFileSystem: true });
     const sourceFile = project.createSourceFile("modules.ts", readFileSync(modulesPath, "utf-8"));
     const declaration = sourceFile.getVariableDeclaration("enabledModules");
     const arrayLiteral = declaration?.getInitializerIfKind(SyntaxKind.ArrayLiteralExpression);
-    if (!arrayLiteral) return { parsed: false, ids: [] };
+    if (!arrayLiteral) return [];
     const ids = [];
     for (const element of arrayLiteral.getElements()) {
       const objectLiteral = element.asKind(SyntaxKind.ObjectLiteralExpression);
@@ -57,31 +40,44 @@ function readEnabledModuleIds(modulesPath) {
       const idValue = idProperty?.getInitializerIfKind(SyntaxKind.StringLiteral)?.getLiteralValue();
       if (idValue) ids.push(idValue);
     }
-    return { parsed: true, ids };
+    return ids;
   } catch {
-    return { parsed: false, ids: [] };
+    return [];
   }
 }
 function selectModuleFactSheets(targetDir, modulesSubdir) {
   const available = existsSync(modulesSubdir) ? readdirSync(modulesSubdir).filter((file) => file.endsWith(".md")).map((file) => file.replace(/\.md$/, "")) : [];
   if (available.length === 0) return [];
-  const parsed = readEnabledModuleIds(join(targetDir, "src", "modules.ts"));
-  if (!parsed.parsed) return available;
-  const enabled = new Set(parsed.ids);
+  const enabled = new Set(readEnabledModuleIds(join(targetDir, "src", "modules.ts")));
   const selected = available.filter((moduleId) => enabled.has(moduleId));
-  return selected;
+  return selected.length > 0 ? selected : available;
 }
 const MODULE_GUIDES_START = "<!-- om:module-guides:start -->";
 const MODULE_GUIDES_END = "<!-- om:module-guides:end -->";
-function renderModuleGuidesBlock(selected) {
+function readModuleGuideLabels(guidesDir) {
+  const factsPath = join(guidesDir, "module-facts.json");
+  if (!existsSync(factsPath)) return {};
+  try {
+    const parsed = JSON.parse(readFileSync(factsPath, "utf-8"));
+    const labels = {};
+    for (const [moduleId, entry] of Object.entries(parsed)) {
+      const label = entry && typeof entry.description === "string" && entry.description || entry && typeof entry.title === "string" && entry.title || "";
+      if (label) labels[moduleId] = label;
+    }
+    return labels;
+  } catch {
+    return {};
+  }
+}
+function renderModuleGuidesBlock(selected, labels) {
   if (selected.length === 0) return "_No module fact-sheets are bundled for this app._";
-  return [
-    `Enabled module facts: ${selected.map((moduleId) => `\`${moduleId}\``).join(",")}.`,
-    "",
-    "Load `.ai/guides/modules/<id>.md` only for a named or targeted installed module/host; never preload all module facts."
-  ].join("\n");
+  const rows = selected.map((moduleId) => {
+    const label = labels[moduleId] ?? `Use the ${moduleId} module`;
+    return `| ${label} | \`.ai/guides/modules/${moduleId}.md\` |`;
+  });
+  return ["| Task | Load |", "|---|---|", ...rows].join("\n");
 }
-function injectModuleGuides(agentsMdPath, selected) {
+function injectModuleGuides(agentsMdPath, selected, labels = {}) {
   if (!existsSync(agentsMdPath)) return;
   const content = readFileSync(agentsMdPath, "utf-8");
   const startIndex = content.indexOf(MODULE_GUIDES_START);
@@ -95,333 +91,154 @@ function injectModuleGuides(agentsMdPath, selected) {
   const before = content.slice(0, startIndex + MODULE_GUIDES_START.length);
   const after = content.slice(endIndex);
   const next = `${before}
-${renderModuleGuidesBlock(selected)}
+${renderModuleGuidesBlock(selected, labels)}
 ${after}`;
   if (next !== content) writeFileSync(agentsMdPath, next);
 }
-const TEXT_EXTENSIONS = /* @__PURE__ */ new Set([".cjs", ".json", ".md", ".mdc", ".mjs", ".sh", ".ts", ".txt"]);
-function isTextAsset(path) {
-  const dot = path.lastIndexOf(".");
-  return dot === -1 || TEXT_EXTENSIONS.has(path.slice(dot));
-}
-function listFiles(root) {
-  if (!existsSync(root)) return [];
-  const files = [];
-  for (const entry of readdirSync(root, { withFileTypes: true }).sort((a, b) => a.name.localeCompare(b.name))) {
-    const absolute = join(root, entry.name);
-    if (entry.isDirectory()) files.push(...listFiles(absolute));
-    else if (entry.isFile()) files.push(absolute);
-  }
-  return files;
-}
-function copyTree(sourceRoot, destinationRoot, config) {
-  for (const sourcePath of listFiles(sourceRoot)) {
-    const destinationPath = join(destinationRoot, relative(sourceRoot, sourcePath));
-    ensureDir(destinationPath);
-    if (isTextAsset(sourcePath)) {
-      writeFileSync(destinationPath, resolvePlaceholders(readFileSync(sourcePath, "utf8"), config));
-    } else {
-      copyFileSync(sourcePath, destinationPath);
-    }
-    if (process.platform !== "win32") chmodSync(destinationPath, statSync(sourcePath).mode & 511);
-  }
-}
-function hashFile(path) {
-  return createHash("sha256").update(readFileSync(path)).digest("hex");
-}
-function canonicalHarnessRoot(root) {
-  const resolved = resolve(root);
-  if (!existsSync(resolved)) {
-    throw new Error(`Harness root must be an existing directory: ${resolved}`);
-  }
-  const canonical = realpathSync(resolved);
-  const entry = lstatSync(canonical, { throwIfNoEntry: false });
-  if (!entry || !entry.isDirectory()) {
-    throw new Error(`Harness root must be an existing directory: ${resolved}`);
-  }
-  return canonical;
-}
-function assertManagedPath(root, path, options = {}) {
-  const absolutePath = resolve(path);
-  const normalizedRelative = relative(root, absolutePath);
-  if (normalizedRelative === ".." || normalizedRelative.startsWith(`..${sep}`)) {
-    throw new Error(`Harness-managed path escapes its root: ${absolutePath}`);
-  }
-  if (normalizedRelative === "") return;
-  const components = normalizedRelative.split(sep).filter(Boolean);
-  let current = root;
-  for (let index = 0; index < components.length; index += 1) {
-    current = join(current, components[index]);
-    const entry = lstatSync(current, { throwIfNoEntry: false });
-    if (!entry) return;
-    if (entry.isSymbolicLink()) {
-      throw new Error(`Harness-managed path contains a symbolic-link component: ${current}`);
-    }
-    const isLeaf = index === components.length - 1;
-    if (!isLeaf && !entry.isDirectory()) {
-      throw new Error(`Harness-managed path component is not a directory: ${current}`);
-    }
-    if (isLeaf && options.leaf === "file" && !entry.isFile()) {
-      throw new Error(`Harness-managed file is not a regular file: ${current}`);
-    }
-  }
-}
-function ensureManagedParent(root, filePath) {
-  const parent = dirname(filePath);
-  const normalizedRelative = relative(root, parent);
-  if (normalizedRelative === ".." || normalizedRelative.startsWith(`..${sep}`)) {
-    throw new Error(`Harness-managed path escapes its root: ${filePath}`);
-  }
-  let current = root;
-  for (const component of normalizedRelative.split(sep).filter(Boolean)) {
-    assertManagedPath(root, current);
-    current = join(current, component);
-    const entry = lstatSync(current, { throwIfNoEntry: false });
-    if (!entry) mkdirSync(current);
-    const created = lstatSync(current, { throwIfNoEntry: false });
-    if (!created || created.isSymbolicLink() || !created.isDirectory()) {
-      throw new Error(`Harness-managed path component is not a real directory: ${current}`);
-    }
-  }
-}
-function harnessGeneratorId() {
-  try {
-    const upstream = JSON.parse(readFileSync(join(GUIDES_DIR, "upstream", "manifest.json"), "utf8"));
-    const generator = typeof upstream.generator === "string" ? upstream.generator : "";
-    const version = generator.slice(generator.lastIndexOf("@") + 1);
-    if (version && version !== generator) return `open-mercato-agentic@${version}`;
-  } catch {
-  }
-  return "open-mercato-agentic@unknown";
-}
-function externalSkillNames(targetDir) {
-  try {
-    const tiers = JSON.parse(readFileSync(join(targetDir, ".ai", "skills", "tiers.json"), "utf8"));
-    return new Set(Array.isArray(tiers.external?.skills) ? tiers.external.skills.filter((name) => typeof name === "string") : []);
-  } catch {
-    return /* @__PURE__ */ new Set();
-  }
-}
-function atomicCopyFile(sourcePath, destinationPath, managedRoot) {
-  if (managedRoot) {
-    assertManagedPath(managedRoot, destinationPath, { leaf: "file" });
-    ensureManagedParent(managedRoot, destinationPath);
-  } else {
-    ensureDir(destinationPath);
-  }
-  const temporaryPath = `${destinationPath}.tmp-${process.pid}-${Date.now()}`;
-  try {
-    if (managedRoot) assertManagedPath(managedRoot, temporaryPath, { leaf: "file" });
-    copyFileSync(sourcePath, temporaryPath);
-    if (process.platform !== "win32") chmodSync(temporaryPath, statSync(sourcePath).mode & 511);
-    if (managedRoot) {
-      assertManagedPath(managedRoot, dirname(destinationPath));
-      assertManagedPath(managedRoot, destinationPath, { leaf: "file" });
-      assertManagedPath(managedRoot, temporaryPath, { leaf: "file" });
-    }
-    renameSync(temporaryPath, destinationPath);
-  } finally {
-    if (!managedRoot || !lstatSync(temporaryPath, { throwIfNoEntry: false })?.isSymbolicLink()) {
-      rmSync(temporaryPath, { force: true });
-    }
-  }
-}
-function atomicWriteFile(destinationPath, content, managedRoot) {
-  if (managedRoot) {
-    assertManagedPath(managedRoot, destinationPath, { leaf: "file" });
-    ensureManagedParent(managedRoot, destinationPath);
-  } else {
-    ensureDir(destinationPath);
-  }
-  const temporaryPath = `${destinationPath}.tmp-${process.pid}-${Date.now()}`;
-  try {
-    if (managedRoot) assertManagedPath(managedRoot, temporaryPath, { leaf: "file" });
-    writeFileSync(temporaryPath, content);
-    if (managedRoot) {
-      assertManagedPath(managedRoot, dirname(destinationPath));
-      assertManagedPath(managedRoot, destinationPath, { leaf: "file" });
-      assertManagedPath(managedRoot, temporaryPath, { leaf: "file" });
-    }
-    renameSync(temporaryPath, destinationPath);
-  } finally {
-    if (!managedRoot || !lstatSync(temporaryPath, { throwIfNoEntry: false })?.isSymbolicLink()) {
-      rmSync(temporaryPath, { force: true });
-    }
-  }
-}
-function resolveManifestPath(root, relativePath) {
-  if (!relativePath || relativePath.includes("\0")) return null;
-  const absolutePath = resolve(root, relativePath);
-  const normalizedRelative = relative(root, absolutePath);
-  if (normalizedRelative === "" || normalizedRelative === ".." || normalizedRelative.startsWith(`..${sep}`)) {
-    return null;
-  }
-  return absolutePath;
-}
-function normalizeManifestRelativePath(path) {
-  return path.replace(/\\/g, "/");
-}
-function readHarnessManifest(manifestPath) {
-  if (!existsSync(manifestPath)) return null;
-  try {
-    const parsed = JSON.parse(readFileSync(manifestPath, "utf8"));
-    if (typeof parsed.version !== "number" || typeof parsed.generator !== "string" || !Array.isArray(parsed.files)) {
-      return null;
-    }
-    const files = [];
-    for (const entry of parsed.files) {
-      if (!entry || typeof entry.path !== "string" || typeof entry.sha256 !== "string" || !/^[a-f0-9]{64}$/.test(entry.sha256) || typeof entry.source !== "string" || typeof entry.userEditable !== "boolean") {
-        return null;
-      }
-      files.push({ ...entry, path: normalizeManifestRelativePath(entry.path) });
-    }
-    return { version: parsed.version, generator: parsed.generator, files };
-  } catch {
-    return null;
-  }
-}
-function targetPathsForTree(sourceRoot, destinationRoot) {
-  return listFiles(sourceRoot).map((sourcePath) => join(destinationRoot, relative(sourceRoot, sourcePath)));
-}
-function finalizeHarnessManifest(config, selectedTools) {
+function generateShared(config) {
   const { targetDir } = config;
   const srcDir = join(AGENTIC_DIR, "shared");
   const selectedModules = selectModuleFactSheets(targetDir, join(GUIDES_DIR, "modules"));
-  const paths = /* @__PURE__ */ new Set([
-    join(targetDir, "AGENTS.md"),
-    ...targetPathsForTree(join(srcDir, "ai"), join(targetDir, ".ai")),
-    ...targetPathsForTree(join(srcDir, "scripts"), join(targetDir, "scripts"))
-  ]);
-  for (const file of readdirSync(GUIDES_DIR)) {
-    if (file.endsWith(".md") || file === "module-facts.json") paths.add(join(targetDir, ".ai", "guides", file));
-  }
-  for (const file of listFiles(join(GUIDES_DIR, "upstream"))) {
-    paths.add(join(targetDir, ".ai", "guides", "upstream", relative(join(GUIDES_DIR, "upstream"), file)));
-  }
-  for (const moduleId of selectedModules) paths.add(join(targetDir, ".ai", "guides", "modules", `${moduleId}.md`));
-  if (selectedTools.includes("claude-code")) {
-    paths.add(join(targetDir, "CLAUDE.md"));
-    paths.add(join(targetDir, ".claude", "settings.json"));
-    paths.add(join(targetDir, ".claude", "hooks", "entity-migration-check.ts"));
-    paths.add(join(targetDir, ".mcp.json.example"));
-  }
-  if (selectedTools.includes("codex")) paths.add(join(targetDir, ".codex", "mcp.json.example"));
-  if (selectedTools.includes("cursor")) {
-    for (const file of listFiles(join(AGENTIC_DIR, "cursor"))) {
-      const rel = relative(join(AGENTIC_DIR, "cursor"), file);
-      paths.add(join(targetDir, ".cursor", rel));
-    }
-  }
-  const manifestPath = join(targetDir, ".ai", "harness", "manifest.json");
-  const externalSkills = externalSkillNames(targetDir);
-  paths.delete(manifestPath);
-  const files = [...paths].filter((path) => existsSync(path)).sort((left, right) => left.localeCompare(right)).map((path) => {
-    const relativePath = normalizeManifestRelativePath(relative(targetDir, path));
-    const skillName = relativePath.match(/^\.ai\/skills\/([^/]+)\//)?.[1];
-    return {
-      path: relativePath,
-      sha256: hashFile(path),
-      source: skillName ? externalSkills.has(skillName) ? "external-override" : "local-skill" : "generated",
-      userEditable: relativePath === "AGENTS.md" || relativePath === ".ai/agentic.config.json" || relativePath === ".ai/lessons.md" || relativePath.startsWith(".ai/lessons/")
-    };
-  });
-  atomicWriteFile(
-    manifestPath,
-    `${JSON.stringify({ version: 1, generator: harnessGeneratorId(), files }, null, 2)}
-`
+  const moduleGuideLabels = readModuleGuideLabels(GUIDES_DIR);
+  writeTemplate(srcDir, "AGENTS.md.template", join(targetDir, "AGENTS.md"), config);
+  injectModuleGuides(join(targetDir, "AGENTS.md"), selectedModules, moduleGuideLabels);
+  writeTemplate(srcDir, "ai/specs/README.md", join(targetDir, ".ai", "specs", "README.md"), config);
+  copyFile(srcDir, "ai/specs/SPEC-000-template.md", join(targetDir, ".ai", "specs", "SPEC-000-template.md"));
+  copyFile(srcDir, "ai/lessons.md", join(targetDir, ".ai", "lessons.md"));
+  copyFile(srcDir, "ai/skills/tiers.json", join(targetDir, ".ai", "skills", "tiers.json"));
+  copyFile(srcDir, "ai/skills/tiers.schema.json", join(targetDir, ".ai", "skills", "tiers.schema.json"));
+  copyFile(srcDir, "ai/agentic.config.json", join(targetDir, ".ai", "agentic.config.json"));
+  copyFile(srcDir, "ai/trackers/github.md", join(targetDir, ".ai", "trackers", "github.md"));
+  copyFile(srcDir, "scripts/install-skills.sh", join(targetDir, "scripts", "install-skills.sh"));
+  copyFile(
+    srcDir,
+    "ai/skills/om-backend-ui-design/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-backend-ui-design", "SKILL.md")
   );
-}
-function preserveIncomingCandidate(targetRoot, destinationPath, sourcePath, relativePath) {
-  for (let suffix = 1; ; suffix += 1) {
-    const label = suffix === 1 ? ".incoming" : `.incoming.${suffix}`;
-    const candidatePath = `${destinationPath}${label}`;
-    assertManagedPath(targetRoot, candidatePath, { leaf: "file" });
-    if (!existsSync(candidatePath)) {
-      atomicCopyFile(sourcePath, candidatePath, targetRoot);
-      return `${relativePath}${label}`;
-    }
-    if (hashFile(candidatePath) === hashFile(sourcePath)) return `${relativePath}${label}`;
-  }
-}
-function applyHarnessUpdate(targetDir, stagingDir, options = {}) {
-  const targetRoot = canonicalHarnessRoot(targetDir);
-  const stagingRoot = canonicalHarnessRoot(stagingDir);
-  const targetManifestPath = join(targetRoot, ".ai", "harness", "manifest.json");
-  const stagingManifestPath = join(stagingRoot, ".ai", "harness", "manifest.json");
-  assertManagedPath(targetRoot, targetManifestPath, { leaf: "file" });
-  assertManagedPath(stagingRoot, stagingManifestPath, { leaf: "file" });
-  const candidateManifest = readHarnessManifest(stagingManifestPath);
-  if (!candidateManifest) {
-    throw new Error("Generated harness candidate has a missing or invalid ownership manifest.");
+  copyFile(
+    srcDir,
+    "ai/skills/om-backend-ui-design/references/ui-components.md",
+    join(targetDir, ".ai", "skills", "om-backend-ui-design", "references", "ui-components.md")
+  );
+  copyFile(srcDir, "ai/skills/om-integration-builder/SKILL.md", join(targetDir, ".ai", "skills", "om-integration-builder", "SKILL.md"));
+  if (existsSync(join(srcDir, "ai", "skills", "om-integration-builder", "STANDALONE.md"))) {
+    copyFile(
+      srcDir,
+      "ai/skills/om-integration-builder/STANDALONE.md",
+      join(targetDir, ".ai", "skills", "om-integration-builder", "STANDALONE.md")
+    );
   }
-  const previousManifest = readHarnessManifest(targetManifestPath);
-  const previousFiles = new Map(previousManifest?.files.map((entry) => [entry.path, entry]) ?? []);
-  const candidatePaths = new Set(candidateManifest.files.map((entry) => entry.path));
-  const candidates = [];
-  for (const entry of candidateManifest.files) {
-    const sourcePath = resolveManifestPath(stagingRoot, entry.path);
-    const destinationPath = resolveManifestPath(targetRoot, entry.path);
-    if (sourcePath) assertManagedPath(stagingRoot, sourcePath, { leaf: "file" });
-    if (destinationPath) assertManagedPath(targetRoot, destinationPath, { leaf: "file" });
-    if (!sourcePath || !destinationPath || !existsSync(sourcePath) || hashFile(sourcePath) !== entry.sha256) {
-      throw new Error(`Generated harness candidate is invalid for ${JSON.stringify(entry.path)}.`);
-    }
-    candidates.push({ entry, sourcePath, destinationPath });
+  copyFile(
+    srcDir,
+    "ai/skills/om-integration-builder/references/adapter-contracts.md",
+    join(targetDir, ".ai", "skills", "om-integration-builder", "references", "adapter-contracts.md")
+  );
+  if (existsSync(join(srcDir, "ai", "skills", "om-integration-builder", "STANDALONE.md"))) {
+    copyFile(
+      srcDir,
+      "ai/skills/om-integration-builder/STANDALONE.md",
+      join(targetDir, ".ai", "skills", "om-integration-builder", "STANDALONE.md")
+    );
   }
-  const conflicts = [];
-  for (const { entry, sourcePath, destinationPath } of candidates) {
-    if (options.force) {
-      atomicCopyFile(sourcePath, destinationPath, targetRoot);
-      continue;
-    }
-    if (!existsSync(destinationPath)) {
-      atomicCopyFile(sourcePath, destinationPath, targetRoot);
-      continue;
-    }
-    const currentHash = hashFile(destinationPath);
-    const previousEntry = previousFiles.get(entry.path);
-    if (currentHash === entry.sha256 || previousEntry && currentHash === previousEntry.sha256) {
-      atomicCopyFile(sourcePath, destinationPath, targetRoot);
+  copyFile(
+    srcDir,
+    "ai/skills/om-system-extension/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-system-extension", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-system-extension/references/extension-contracts.md",
+    join(targetDir, ".ai", "skills", "om-system-extension", "references", "extension-contracts.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-module-scaffold/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-module-scaffold", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-module-scaffold/references/naming-conventions.md",
+    join(targetDir, ".ai", "skills", "om-module-scaffold", "references", "naming-conventions.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-module-scaffold/references/navigation-patterns.md",
+    join(targetDir, ".ai", "skills", "om-module-scaffold", "references", "navigation-patterns.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-troubleshooter/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-troubleshooter", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-troubleshooter/references/diagnostic-commands.md",
+    join(targetDir, ".ai", "skills", "om-troubleshooter", "references", "diagnostic-commands.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-eject-and-customize/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-eject-and-customize", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-data-model-design/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-data-model-design", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-data-model-design/references/mikro-orm-cheatsheet.md",
+    join(targetDir, ".ai", "skills", "om-data-model-design", "references", "mikro-orm-cheatsheet.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-implement-spec/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-implement-spec", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-help/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-help", "SKILL.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-help/references/skills-catalog.md",
+    join(targetDir, ".ai", "skills", "om-help", "references", "skills-catalog.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-help/references/workflow-sequences.md",
+    join(targetDir, ".ai", "skills", "om-help", "references", "workflow-sequences.md")
+  );
+  copyFile(
+    srcDir,
+    "ai/skills/om-auto-upgrade-0.4.10-to-0.5.0/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-auto-upgrade-0.4.10-to-0.5.0", "SKILL.md")
+  );
+  for (const autoSkill of [
+    "om-auto-create-pr",
+    "om-auto-continue-pr",
+    "om-auto-create-pr-loop",
+    "om-auto-continue-pr-loop",
+    "om-auto-review-pr",
+    "om-auto-fix-issue",
+    "om-prepare-test-env"
+  ]) {
+    if (!existsSync(join(srcDir, "ai", "skills", autoSkill, "SKILL.md"))) {
       continue;
     }
-    const candidate = preserveIncomingCandidate(targetRoot, destinationPath, sourcePath, entry.path);
-    conflicts.push({ path: entry.path, candidate });
-  }
-  const retainedRetiredEntries = [];
-  for (const previousEntry of previousManifest?.files ?? []) {
-    if (candidatePaths.has(previousEntry.path)) continue;
-    const destinationPath = resolveManifestPath(targetRoot, previousEntry.path);
-    if (!destinationPath || !existsSync(destinationPath)) continue;
-    assertManagedPath(targetRoot, destinationPath, { leaf: "file" });
-    let unchanged = false;
-    try {
-      unchanged = hashFile(destinationPath) === previousEntry.sha256;
-    } catch {
-    }
-    if (unchanged) {
-      assertManagedPath(targetRoot, dirname(destinationPath));
-      assertManagedPath(targetRoot, destinationPath, { leaf: "file" });
-      rmSync(destinationPath, { force: true });
-    } else {
-      retainedRetiredEntries.push(previousEntry);
-      conflicts.push({ path: previousEntry.path, candidate: null });
-    }
+    copyFile(
+      srcDir,
+      `ai/skills/${autoSkill}/SKILL.md`,
+      join(targetDir, ".ai", "skills", autoSkill, "SKILL.md")
+    );
   }
-  const finalManifest = {
-    ...candidateManifest,
-    files: [...candidateManifest.files, ...retainedRetiredEntries]
-  };
-  atomicWriteFile(targetManifestPath, `${JSON.stringify(finalManifest, null, 2)}
-`, targetRoot);
-  return conflicts;
-}
-function generateShared(config) {
-  const { targetDir } = config;
-  const srcDir = join(AGENTIC_DIR, "shared");
-  const selectedModules = selectModuleFactSheets(targetDir, join(GUIDES_DIR, "modules"));
-  writeTemplate(srcDir, "AGENTS.md.template", join(targetDir, "AGENTS.md"), config);
-  copyTree(join(srcDir, "ai"), join(targetDir, ".ai"), config);
-  copyTree(join(srcDir, "scripts"), join(targetDir, "scripts"), config);
+  copyFile(
+    srcDir,
+    "ai/skills/om-trim-unused-modules/SKILL.md",
+    join(targetDir, ".ai", "skills", "om-trim-unused-modules", "SKILL.md")
+  );
+  copyFile(srcDir, "ai/qa/tests/playwright.config.ts", join(targetDir, ".ai", "qa", "tests", "playwright.config.ts"));
   if (existsSync(GUIDES_DIR)) {
     const guidesDestDir = join(targetDir, ".ai", "guides");
     for (const file of readdirSync(GUIDES_DIR)) {
@@ -437,7 +254,6 @@ function generateShared(config) {
       ensureDir(destPath);
       copyFileSync(moduleFactsPath, destPath);
     }
-    copyTree(join(GUIDES_DIR, "upstream"), join(guidesDestDir, "upstream"), config);
     const modulesSubdir = join(GUIDES_DIR, "modules");
     for (const moduleId of selectedModules) {
       const destPath = join(guidesDestDir, "modules", `${moduleId}.md`);
@@ -445,7 +261,6 @@ function generateShared(config) {
       copyFileSync(join(modulesSubdir, `${moduleId}.md`), destPath);
     }
   }
-  injectModuleGuides(join(targetDir, "AGENTS.md"), selectedModules);
 }
 function generateClaudeCode(config) {
   const { targetDir } = config;
@@ -454,6 +269,7 @@ function generateClaudeCode(config) {
   copyFile(srcDir, "settings.json", join(targetDir, ".claude", "settings.json"));
   copyFile(srcDir, "hooks/entity-migration-check.ts", join(targetDir, ".claude", "hooks", "entity-migration-check.ts"));
   copyFile(srcDir, "mcp.json.example", join(targetDir, ".mcp.json.example"));
+  ensureSkillsLink(join(targetDir, ".claude", "skills"), join("..", ".ai", "skills"));
 }
 function generateCodex(config) {
   const { targetDir } = config;
@@ -492,6 +308,16 @@ function generateCursor(config) {
   copyFile(srcDir, "hooks/entity-migration-check.mjs", join(targetDir, ".cursor", "hooks", "entity-migration-check.mjs"));
   copyFile(srcDir, "mcp.json.example", join(targetDir, ".cursor", "mcp.json.example"));
 }
+function ensureSkillsLink(linkPath, target) {
+  ensureDir(linkPath);
+  if (existsSync(linkPath) && !lstatSync(linkPath).isSymbolicLink()) {
+    return;
+  }
+  if (lstatSync(linkPath, { throwIfNoEntry: false })?.isSymbolicLink()) {
+    unlinkSync(linkPath);
+  }
+  symlinkSync(target, linkPath);
+}
 const TOOLS = [
   { key: "1", label: "Claude Code     (Anthropic)", id: "claude-code" },
   { key: "2", label: "Codex           (OpenAI)", id: "codex" },
@@ -500,30 +326,6 @@ const TOOLS = [
   { key: "5", label: "Skip \u2014 set up manually later", id: "skip" }
 ];
 const SELECTABLE = TOOLS.filter((t) => t.id !== "multiple" && t.id !== "skip");
-function persistedAgentSelection(targetDir) {
-  const selectableIds = SELECTABLE.map((tool) => tool.id);
-  const tiersPath = join(targetDir, ".ai", "skills", "tiers.json");
-  try {
-    const tiers = JSON.parse(readFileSync(tiersPath, "utf8"));
-    if (Array.isArray(tiers.agents?.ignore) && tiers.agents.ignore.every((id) => typeof id === "string")) {
-      const ignored = new Set(tiers.agents.ignore);
-      return selectableIds.filter((id) => !ignored.has(id));
-    }
-  } catch {
-  }
-  const manifest = readHarnessManifest(join(targetDir, ".ai", "harness", "manifest.json"));
-  const owned = new Set(manifest?.files.map((entry) => entry.path) ?? []);
-  const selected = SELECTABLE.filter((tool) => {
-    if (tool.id === "claude-code") {
-      return owned.has("CLAUDE.md") || owned.has(".claude/settings.json") || existsSync(join(targetDir, "CLAUDE.md")) || existsSync(join(targetDir, ".claude", "settings.json"));
-    }
-    if (tool.id === "codex") {
-      return owned.has(".codex/mcp.json.example") || existsSync(join(targetDir, ".codex", "mcp.json.example"));
-    }
-    return owned.has(".cursor/hooks.json") || existsSync(join(targetDir, ".cursor", "hooks.json"));
-  }).map((tool) => tool.id);
-  return selected.length > 0 ? selected : null;
-}
 async function promptSelection(ask) {
   console.log("");
   console.log("\u{1F916}  Agentic workflow setup");
@@ -560,8 +362,6 @@ async function runAgenticSetup(targetDir, ask, options) {
   let selectedIds;
   if (options?.tool) {
     selectedIds = options.tool.split(",").map((t) => t.trim());
-  } else if (options?.updateHarness) {
-    selectedIds = persistedAgentSelection(targetDir) ?? await promptSelection(ask);
   } else {
     selectedIds = await promptSelection(ask);
   }
@@ -575,33 +375,11 @@ async function runAgenticSetup(targetDir, ask, options) {
     projectName: basename(targetDir),
     targetDir
   };
-  const stagingDir = mkdtempSync(join(tmpdir(), "open-mercato-harness-"));
-  try {
-    const modulesSourcePath = join(targetDir, "src", "modules.ts");
-    const modulesCandidatePath = join(stagingDir, "src", "modules.ts");
-    if (existsSync(modulesSourcePath)) {
-      ensureDir(modulesCandidatePath);
-      copyFileSync(modulesSourcePath, modulesCandidatePath);
-    }
-    const stagingConfig = {
-      projectName: config.projectName,
-      targetDir: stagingDir
-    };
-    generateHarness(stagingConfig, selectedIds);
-    const conflicts = applyHarnessUpdate(targetDir, stagingDir, {
-      force: options?.force
-    });
-    if (conflicts.length > 0) {
-      console.warn("");
-      console.warn("   \u26A0 Preserved locally modified harness files:");
-      for (const conflict of conflicts) {
-        const detail = conflict.candidate ? `candidate: ${conflict.candidate}` : "retired asset kept because it has local changes";
-        console.warn(`   \u2022 ${conflict.path} (${detail})`);
-      }
-    }
-  } finally {
-    rmSync(stagingDir, { recursive: true, force: true });
-  }
+  generateShared(config);
+  if (selectedIds.includes("claude-code")) generateClaudeCode(config);
+  if (selectedIds.includes("codex")) generateCodex(config);
+  if (selectedIds.includes("cursor")) generateCursor(config);
+  persistAgentSelection(targetDir, selectedIds);
   installSkills(targetDir);
   console.log("");
   console.log("   Agentic setup complete:");
@@ -621,14 +399,6 @@ async function runAgenticSetup(targetDir, ask, options) {
   console.log("   refresh the external open-mercato/skills subset.");
   console.log("");
 }
-function generateHarness(config, selectedIds) {
-  generateShared(config);
-  if (selectedIds.includes("claude-code")) generateClaudeCode(config);
-  if (selectedIds.includes("codex")) generateCodex(config);
-  if (selectedIds.includes("cursor")) generateCursor(config);
-  persistAgentSelection(config.targetDir, selectedIds);
-  finalizeHarnessManifest(config, selectedIds);
-}
 function persistAgentSelection(targetDir, selectedIds) {
   const manifestPath = join(targetDir, ".ai", "skills", "tiers.json");
   if (!existsSync(manifestPath)) return;
@@ -643,18 +413,16 @@ function persistAgentSelection(targetDir, selectedIds) {
 `);
 }
 function installSkills(targetDir) {
-  const installScript = join(targetDir, "scripts", "install-skills.mjs");
+  const installScript = join(targetDir, "scripts", "install-skills.sh");
   if (!existsSync(installScript)) return;
   console.log("");
   console.log("   Installing agent skills (local tiers + external open-mercato/skills subset)...");
-  const result = spawnSync(process.execPath, [installScript], { cwd: targetDir, stdio: "inherit" });
+  const result = spawnSync("sh", [installScript], { cwd: targetDir, stdio: "inherit" });
   if (result.error || result.status !== 0) {
     console.log("   \u26A0 Skill installation did not complete; run `yarn install-skills` inside the app when online.");
   }
 }
 export {
-  applyHarnessUpdate,
-  renderModuleGuidesBlock,
   runAgenticSetup
 };
 //# sourceMappingURL=agentic-setup.js.map